HEADER TRANSCRIPTION 23-SEP-16 5TF2 TITLE CRYSTAL STRUCTURE OF THE WD40 DOMAIN OF THE HUMAN PROLACTIN REGULATORY TITLE 2 ELEMENT-BINDING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLACTIN REGULATORY ELEMENT-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: WD40 DOMAIN, RESIDUES 1-386; COMPND 5 SYNONYM: MAMMALIAN GUANINE NUCLEOTIDE EXCHANGE FACTOR MSEC12; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PREB, SEC12; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PFBOH-MHL KEYWDS WD40, ACTIVATOR, PROTEIN TRANSPORT, TRANSCRIPTION, STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM (SGC) EXPDTA X-RAY DIFFRACTION AUTHOR J.R.WALKER,Q.ZHANG,A.DONG,A.WERNIMONT,Y.LI,H.HE,W.TEMPEL,C.BOUNTRA, AUTHOR 2 A.M.EDWARDS,C.H.ARROWSMITH,Z.CHEN,Y.TONG,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 4 04-OCT-23 5TF2 1 REMARK REVDAT 3 24-JAN-18 5TF2 1 AUTHOR JRNL REVDAT 2 16-AUG-17 5TF2 1 SOURCE REVDAT 1 23-NOV-16 5TF2 0 JRNL AUTH J.R.WALKER,Q.ZHANG,A.DONG,A.WERNIMONT,Y.LI,H.HE,W.TEMPEL, JRNL AUTH 2 C.BOUNTRA,A.M.EDWARDS,C.H.ARROWSMITH,Z.CHEN,Y.TONG, JRNL AUTH 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL CRYSTAL STRUCTURE OF THE WD40 DOMAIN OF THE HUMAN PROLACTIN JRNL TITL 2 REGULATORY ELEMENT-BINDING PROTEIN (CASP TARGET) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15265 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 784 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1102 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2519 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 20 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.51000 REMARK 3 B22 (A**2) : 0.51000 REMARK 3 B33 (A**2) : -1.64000 REMARK 3 B12 (A**2) : 0.25000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.384 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.250 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.183 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.049 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2602 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2425 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3553 ; 1.305 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5547 ; 0.849 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 339 ; 6.614 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 104 ;31.632 ;23.558 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 380 ;13.107 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;17.866 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 415 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2989 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 601 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1362 ; 0.804 ; 2.976 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1361 ; 0.802 ; 2.975 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1699 ; 1.482 ; 4.453 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 386 REMARK 3 ORIGIN FOR THE GROUP (A): 99.5777 61.3455 8.8601 REMARK 3 T TENSOR REMARK 3 T11: 0.0371 T22: 0.0915 REMARK 3 T33: 0.0486 T12: -0.0324 REMARK 3 T13: -0.0159 T23: 0.0492 REMARK 3 L TENSOR REMARK 3 L11: 3.4355 L22: 2.1240 REMARK 3 L33: 1.6411 L12: -0.1053 REMARK 3 L13: 0.8192 L23: 0.1187 REMARK 3 S TENSOR REMARK 3 S11: -0.1509 S12: -0.0680 S13: 0.1374 REMARK 3 S21: -0.0578 S22: 0.0503 S23: -0.0212 REMARK 3 S31: -0.1386 S32: 0.0445 S33: 0.1006 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5TF2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000222869. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92045 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16070 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.70 REMARK 200 R MERGE FOR SHELL (I) : 0.77900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 1ERJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PREB PROTEIN WAS MIXED WITH ELASTASE REMARK 280 AT 1:1000 (W/W) RATIO BEFORE SETTING UP CRYSTALLIZATION. REMARK 280 CRYSTALS WERE GROWN AT 293 K USING THE SITTING DROP METHOD BY REMARK 280 MIXING 0.5 UL PROTEIN WITH 0.5 UL WELL SOLUTION CONSISTING OF REMARK 280 1.4M MALONATE, PH 7.0. THE CRYSTALS WERE CRYOPROTECTED BY REMARK 280 IMMERSION IN PARATONE., VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.67133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.34267 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.67133 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.34267 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 27.67133 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 55.34267 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 27.67133 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 55.34267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 ARG A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 ARG A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 GLY A 55 REMARK 465 GLN A 99 REMARK 465 GLN A 100 REMARK 465 GLN A 101 REMARK 465 GLY A 102 REMARK 465 ASN A 103 REMARK 465 LYS A 104 REMARK 465 ALA A 105 REMARK 465 GLU A 106 REMARK 465 LYS A 107 REMARK 465 ALA A 108 REMARK 465 GLY A 109 REMARK 465 SER A 110 REMARK 465 LYS A 111 REMARK 465 GLU A 112 REMARK 465 GLN A 113 REMARK 465 GLY A 114 REMARK 465 PRO A 115 REMARK 465 ARG A 116 REMARK 465 GLN A 117 REMARK 465 ARG A 118 REMARK 465 LYS A 119 REMARK 465 GLY A 120 REMARK 465 ALA A 121 REMARK 465 ALA A 122 REMARK 465 PRO A 123 REMARK 465 ALA A 124 REMARK 465 GLU A 125 REMARK 465 LYS A 126 REMARK 465 LYS A 127 REMARK 465 CYS A 128 REMARK 465 GLY A 129 REMARK 465 ALA A 130 REMARK 465 GLU A 131 REMARK 465 THR A 132 REMARK 465 GLN A 133 REMARK 465 HIS A 134 REMARK 465 GLU A 135 REMARK 465 GLY A 136 REMARK 465 ASN A 236 REMARK 465 GLY A 237 REMARK 465 ARG A 387 REMARK 465 SER A 388 REMARK 465 VAL A 389 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 THR A 39 OG1 CG2 REMARK 470 LYS A 42 NZ REMARK 470 GLN A 49 OE1 NE2 REMARK 470 GLU A 51 CG CD OE1 OE2 REMARK 470 ILE A 53 CD1 REMARK 470 ASN A 54 CG OD1 ND2 REMARK 470 ARG A 56 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 HIS A 98 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 138 CG CD OE1 OE2 REMARK 470 ARG A 140 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 182 NZ REMARK 470 LYS A 193 NZ REMARK 470 ASP A 207 OD1 OD2 REMARK 470 LYS A 209 CE NZ REMARK 470 LYS A 218 CE NZ REMARK 470 LYS A 224 CD CE NZ REMARK 470 GLN A 234 CG CD OE1 NE2 REMARK 470 PRO A 238 CG CD REMARK 470 THR A 239 OG1 CG2 REMARK 470 SER A 241 OG REMARK 470 SER A 242 OG REMARK 470 LEU A 262 CG CD1 CD2 REMARK 470 LYS A 272 CD CE NZ REMARK 470 GLU A 310 CG CD OE1 OE2 REMARK 470 LYS A 355 CD CE NZ REMARK 470 ARG A 357 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 360 CG CD OE1 OE2 REMARK 470 ARG A 386 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 68 -118.40 61.34 REMARK 500 ASP A 87 -124.67 46.89 REMARK 500 LEU A 144 -150.94 -117.16 REMARK 500 PHE A 151 45.01 -140.59 REMARK 500 LYS A 224 -118.21 51.24 REMARK 500 PHE A 240 42.57 -94.19 REMARK 500 ASP A 375 1.48 -68.90 REMARK 500 REMARK 500 REMARK: NULL DBREF 5TF2 A 1 389 UNP Q9HCU5 PREB_HUMAN 1 389 SEQADV 5TF2 MET A -17 UNP Q9HCU5 INITIATING METHIONINE SEQADV 5TF2 HIS A -16 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 HIS A -15 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 HIS A -14 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 HIS A -13 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 HIS A -12 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 HIS A -11 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 SER A -10 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 SER A -9 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 GLY A -8 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 ARG A -7 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 GLU A -6 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 ASN A -5 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 LEU A -4 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 TYR A -3 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 PHE A -2 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 GLN A -1 UNP Q9HCU5 EXPRESSION TAG SEQADV 5TF2 GLY A 0 UNP Q9HCU5 EXPRESSION TAG SEQRES 1 A 407 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 407 LEU TYR PHE GLN GLY MET GLY ARG ARG ARG ALA PRO GLU SEQRES 3 A 407 LEU TYR ARG ALA PRO PHE PRO LEU TYR ALA LEU GLN VAL SEQRES 4 A 407 ASP PRO SER THR GLY LEU LEU ILE ALA ALA GLY GLY GLY SEQRES 5 A 407 GLY ALA ALA LYS THR GLY ILE LYS ASN GLY VAL HIS PHE SEQRES 6 A 407 LEU GLN LEU GLU LEU ILE ASN GLY ARG LEU SER ALA SER SEQRES 7 A 407 LEU LEU HIS SER HIS ASP THR GLU THR ARG ALA THR MET SEQRES 8 A 407 ASN LEU ALA LEU ALA GLY ASP ILE LEU ALA ALA GLY GLN SEQRES 9 A 407 ASP ALA HIS CYS GLN LEU LEU ARG PHE GLN ALA HIS GLN SEQRES 10 A 407 GLN GLN GLY ASN LYS ALA GLU LYS ALA GLY SER LYS GLU SEQRES 11 A 407 GLN GLY PRO ARG GLN ARG LYS GLY ALA ALA PRO ALA GLU SEQRES 12 A 407 LYS LYS CYS GLY ALA GLU THR GLN HIS GLU GLY LEU GLU SEQRES 13 A 407 LEU ARG VAL GLU ASN LEU GLN ALA VAL GLN THR ASP PHE SEQRES 14 A 407 SER SER ASP PRO LEU GLN LYS VAL VAL CYS PHE ASN HIS SEQRES 15 A 407 ASP ASN THR LEU LEU ALA THR GLY GLY THR ASP GLY TYR SEQRES 16 A 407 VAL ARG VAL TRP LYS VAL PRO SER LEU GLU LYS VAL LEU SEQRES 17 A 407 GLU PHE LYS ALA HIS GLU GLY GLU ILE GLU ASP LEU ALA SEQRES 18 A 407 LEU GLY PRO ASP GLY LYS LEU VAL THR VAL GLY ARG ASP SEQRES 19 A 407 LEU LYS ALA SER VAL TRP GLN LYS ASP GLN LEU VAL THR SEQRES 20 A 407 GLN LEU HIS TRP GLN GLU ASN GLY PRO THR PHE SER SER SEQRES 21 A 407 THR PRO TYR ARG TYR GLN ALA CYS ARG PHE GLY GLN VAL SEQRES 22 A 407 PRO ASP GLN PRO ALA GLY LEU ARG LEU PHE THR VAL GLN SEQRES 23 A 407 ILE PRO HIS LYS ARG LEU ARG GLN PRO PRO PRO CYS TYR SEQRES 24 A 407 LEU THR ALA TRP ASP GLY SER ASN PHE LEU PRO LEU ARG SEQRES 25 A 407 THR LYS SER CYS GLY HIS GLU VAL VAL SER CYS LEU ASP SEQRES 26 A 407 VAL SER GLU SER GLY THR PHE LEU GLY LEU GLY THR VAL SEQRES 27 A 407 THR GLY SER VAL ALA ILE TYR ILE ALA PHE SER LEU GLN SEQRES 28 A 407 CYS LEU TYR TYR VAL ARG GLU ALA HIS GLY ILE VAL VAL SEQRES 29 A 407 THR ASP VAL ALA PHE LEU PRO GLU LYS GLY ARG GLY PRO SEQRES 30 A 407 GLU LEU LEU GLY SER HIS GLU THR ALA LEU PHE SER VAL SEQRES 31 A 407 ALA VAL ASP SER ARG CYS GLN LEU HIS LEU LEU PRO SER SEQRES 32 A 407 ARG ARG SER VAL HET UNX A 401 1 HETNAM UNX UNKNOWN ATOM OR ION FORMUL 2 UNX X FORMUL 3 HOH *20(H2 O) HELIX 1 AA1 PRO A 206 GLY A 208 5 3 HELIX 2 AA2 ARG A 357 GLY A 363 1 7 SHEET 1 AA1 4 TYR A 10 ARG A 11 0 SHEET 2 AA1 4 ARG A 377 LEU A 382 -1 O CYS A 378 N TYR A 10 SHEET 3 AA1 4 ALA A 368 ALA A 373 -1 N LEU A 369 O HIS A 381 SHEET 4 AA1 4 VAL A 346 PHE A 351 -1 N ALA A 350 O PHE A 370 SHEET 1 AA2 4 LEU A 16 ASP A 22 0 SHEET 2 AA2 4 LEU A 27 GLY A 33 -1 O ILE A 29 N GLN A 20 SHEET 3 AA2 4 ASN A 43 LEU A 52 -1 O HIS A 46 N ALA A 30 SHEET 4 AA2 4 LEU A 57 ASP A 66 -1 O LEU A 62 N PHE A 47 SHEET 1 AA3 4 THR A 72 ALA A 78 0 SHEET 2 AA3 4 ILE A 81 GLN A 86 -1 O ALA A 83 N ALA A 76 SHEET 3 AA3 4 HIS A 89 ALA A 97 -1 O GLN A 91 N ALA A 84 SHEET 4 AA3 4 LEU A 139 GLN A 148 -1 O ARG A 140 N GLN A 96 SHEET 1 AA4 4 GLN A 157 PHE A 162 0 SHEET 2 AA4 4 LEU A 168 GLY A 173 -1 O ALA A 170 N CYS A 161 SHEET 3 AA4 4 TYR A 177 LYS A 182 -1 O TRP A 181 N LEU A 169 SHEET 4 AA4 4 LYS A 188 LYS A 193 -1 O VAL A 189 N VAL A 180 SHEET 1 AA5 4 ILE A 199 LEU A 204 0 SHEET 2 AA5 4 LEU A 210 GLY A 214 -1 O VAL A 213 N GLU A 200 SHEET 3 AA5 4 ALA A 219 GLN A 223 -1 O TRP A 222 N LEU A 210 SHEET 4 AA5 4 GLN A 226 LEU A 231 -1 O VAL A 228 N VAL A 221 SHEET 1 AA6 4 TYR A 245 GLN A 254 0 SHEET 2 AA6 4 LEU A 262 PRO A 270 -1 O PHE A 265 N ARG A 251 SHEET 3 AA6 4 TYR A 281 ASP A 286 -1 O TRP A 285 N LEU A 264 SHEET 4 AA6 4 PRO A 292 SER A 297 -1 O ARG A 294 N ALA A 284 SHEET 1 AA7 4 VAL A 303 VAL A 308 0 SHEET 2 AA7 4 PHE A 314 THR A 319 -1 O GLY A 318 N SER A 304 SHEET 3 AA7 4 VAL A 324 ILE A 328 -1 O TYR A 327 N LEU A 315 SHEET 4 AA7 4 GLN A 333 VAL A 338 -1 O LEU A 335 N ILE A 326 CISPEP 1 VAL A 183 PRO A 184 0 5.89 CRYST1 160.708 160.708 83.014 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006222 0.003593 0.000000 0.00000 SCALE2 0.000000 0.007185 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012046 0.00000