HEADER HYDROLASE 26-SEP-16 5TFQ TITLE CRYSTAL STRUCTURE OF A REPRESENTATIVE OF CLASS A BETA-LACTAMASE FROM TITLE 2 BACTEROIDES CELLULOSILYTICUS DSM 14838 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES CELLULOSILYTICUS DSM 14838; SOURCE 3 ORGANISM_TAXID: 537012; SOURCE 4 GENE: BACCELL_03967; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,C.HATZOS-SKINTGES,G.BABNIGG,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 1 02-NOV-16 5TFQ 0 JRNL AUTH B.NOCEK,C.HATZOS-SKINTGES,G.BABNIGG,A.JOACHIMIAK, JRNL AUTH 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL CRYSTAL STRUCTURE OF A REPRESENTATIVE OF CLASS A JRNL TITL 2 BETA-LACTAMASE FROM BACTEROIDES CELLULOSILYTICUS DSM 14838 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 109930 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.116 REMARK 3 R VALUE (WORKING SET) : 0.115 REMARK 3 FREE R VALUE : 0.134 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5739 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2433 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 25.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 129 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2133 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 411 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18000 REMARK 3 B22 (A**2) : 0.42000 REMARK 3 B33 (A**2) : -0.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.023 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.024 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.014 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.639 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.985 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.982 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2306 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2219 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3151 ; 1.851 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5159 ; 1.293 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 322 ;15.907 ; 5.373 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;35.862 ;26.800 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 402 ;12.092 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ; 6.218 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 373 ; 0.128 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2712 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 484 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1154 ; 1.699 ; 1.581 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1153 ; 1.620 ; 1.578 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1453 ; 1.996 ; 2.381 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1454 ; 2.021 ; 2.383 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1152 ; 3.674 ; 1.907 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1152 ; 3.672 ; 1.907 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1683 ; 3.745 ; 2.744 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3080 ; 4.671 ;16.032 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2805 ; 3.711 ;14.296 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4525 ; 6.188 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 75 ;38.226 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4813 ;10.758 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5TFQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000224158. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 133512 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.070 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 M NAH2PO4/1.6 M K2HPO4 0.1 M REMARK 280 IMIDAZOLE:HCL PH 8.0 0.2 M SODIUM CHLORIDE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.91850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.52900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.40400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.52900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.91850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.40400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 ILE A 279 REMARK 465 GLN A 280 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 2 CG OD1 ND2 REMARK 470 LYS A 18 CD CE NZ REMARK 470 LYS A 21 CE NZ REMARK 470 GLU A 224 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 156 O HOH A 402 1.83 REMARK 500 ND1 HIS A 66 O HOH A 403 1.92 REMARK 500 O HOH A 704 O HOH A 749 1.95 REMARK 500 O HOH A 496 O HOH A 747 1.96 REMARK 500 O HOH A 619 O HOH A 748 1.96 REMARK 500 NZ LYS A 140 O HOH A 404 2.04 REMARK 500 O HOH A 794 O HOH A 802 2.04 REMARK 500 OD2 ASP A 156 O HOH A 405 2.05 REMARK 500 O HOH A 631 O HOH A 734 2.07 REMARK 500 O HOH A 613 O HOH A 709 2.09 REMARK 500 O HOH A 703 O HOH A 772 2.11 REMARK 500 CE LYS A 176 O HOH A 490 2.13 REMARK 500 O HOH A 602 O HOH A 613 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 192 CA - CB - CG ANGL. DEV. = -12.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 47 -139.72 49.01 REMARK 500 LEU A 80 75.93 -110.56 REMARK 500 LYS A 201 -116.04 -97.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 809 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH A 810 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH A 811 DISTANCE = 6.76 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 DBREF 5TFQ A 1 280 UNP E2NI36 E2NI36_9BACE 22 301 SEQRES 1 A 280 THR ASN ARG THR PRO LYS GLN LYS ILE GLU GLN GLN ILE SEQRES 2 A 280 ASP SER LEU LEU LYS ASP LYS LYS ALA THR VAL GLY VAL SEQRES 3 A 280 ALA VAL LEU ALA ASN ASP GLU THR VAL ALA VAL TYR ASN SEQRES 4 A 280 ASN GLN ILE HIS PHE PRO LEU LEU SER VAL PHE LYS PHE SEQRES 5 A 280 HIS VAL GLY LEU ALA VAL LEU ASP LYS MSE ASP LYS GLY SEQRES 6 A 280 HIS ILE ALA LEU ASP SER LEU ILE GLU VAL LYS SER SER SEQRES 7 A 280 GLN LEU LYS SER ASN THR TYR SER PRO LEU ARG ASP LYS SEQRES 8 A 280 PHE PRO ASP GLN ASP ILE THR ILE SER LEU GLY GLU LEU SEQRES 9 A 280 LEU LYS TYR THR ILE SER LYS SER ASP ASN ASN THR CYS SEQRES 10 A 280 ASP ILE LEU ILE GLU TYR VAL GLY GLY ILE ASP GLN VAL SEQRES 11 A 280 ASN GLU TYR VAL LYS SER LEU GLY ILE LYS ASP CYS ASN SEQRES 12 A 280 LEU ALA ALA THR GLU THR LEU MSE HIS THR SER GLY ASP SEQRES 13 A 280 THR ASP LEU ASN TRP SER THR PRO GLU GLU VAL VAL ARG SEQRES 14 A 280 LEU LEU ASN ILE ALA ASP LYS GLN PRO LEU PHE GLY THR SEQRES 15 A 280 GLN TYR LYS ASP PHE LEU GLN ALA ILE MSE GLN GLU THR SEQRES 16 A 280 SER THR GLY LYS ASP LYS LEU LYS GLY GLN LEU PRO ALA SEQRES 17 A 280 ASP VAL ILE VAL GLY HIS LYS THR GLY SER SER ASP ARG SEQRES 18 A 280 THR PRO GLU GLY ILE LYS ILE ALA ASP ASN ASP ALA GLY SEQRES 19 A 280 PHE VAL ILE LEU PRO ASN GLY GLN LYS TYR TYR ILE ALA SEQRES 20 A 280 VAL PHE VAL MSE GLU SER GLN GLU THR ASP ALA ASP ASN SEQRES 21 A 280 ALA ALA ILE ILE ALA SER ILE SER LYS ILE VAL TYR ASP SEQRES 22 A 280 THR LEU ASN SER ASP ILE GLN MODRES 5TFQ MSE A 62 MET MODIFIED RESIDUE MODRES 5TFQ MSE A 151 MET MODIFIED RESIDUE MODRES 5TFQ MSE A 192 MET MODIFIED RESIDUE MODRES 5TFQ MSE A 251 MET MODIFIED RESIDUE HET MSE A 62 8 HET MSE A 151 8 HET MSE A 192 13 HET MSE A 251 8 HET PO4 A 301 5 HET PO4 A 302 5 HET GOL A 303 6 HET GOL A 304 6 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 PO4 2(O4 P 3-) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *411(H2 O) HELIX 1 AA1 THR A 4 LYS A 18 1 15 HELIX 2 AA2 VAL A 49 GLY A 65 1 17 HELIX 3 AA3 LYS A 76 LEU A 80 5 5 HELIX 4 AA4 SER A 86 PHE A 92 1 7 HELIX 5 AA5 LEU A 101 SER A 110 1 10 HELIX 6 AA6 ASP A 113 GLY A 125 1 13 HELIX 7 AA7 GLY A 126 LEU A 137 1 12 HELIX 8 AA8 THR A 147 GLY A 155 1 9 HELIX 9 AA9 ASP A 156 ASP A 158 5 3 HELIX 10 AB1 THR A 163 GLN A 177 1 15 HELIX 11 AB2 GLY A 181 GLU A 194 1 14 HELIX 12 AB3 THR A 256 ASP A 278 1 23 SHEET 1 AA1 5 GLU A 33 TYR A 38 0 SHEET 2 AA1 5 THR A 23 ALA A 30 -1 N VAL A 28 O VAL A 35 SHEET 3 AA1 5 LYS A 243 SER A 253 -1 O MSE A 251 N THR A 23 SHEET 4 AA1 5 LYS A 227 ILE A 237 -1 N LYS A 227 O SER A 253 SHEET 5 AA1 5 VAL A 212 SER A 218 -1 N GLY A 217 O ASN A 231 SHEET 1 AA2 3 PHE A 44 PRO A 45 0 SHEET 2 AA2 3 ASN A 160 SER A 162 -1 O SER A 162 N PHE A 44 SHEET 3 AA2 3 CYS A 142 LEU A 144 -1 N ASN A 143 O TRP A 161 SHEET 1 AA3 2 LEU A 72 VAL A 75 0 SHEET 2 AA3 2 ILE A 97 SER A 100 -1 O ILE A 97 N VAL A 75 LINK C LYS A 61 N MSE A 62 1555 1555 1.33 LINK C MSE A 62 N ASP A 63 1555 1555 1.33 LINK C LEU A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N HIS A 152 1555 1555 1.34 LINK C ILE A 191 N MSE A 192 1555 1555 1.31 LINK C MSE A 192 N GLN A 193 1555 1555 1.33 LINK C VAL A 250 N MSE A 251 1555 1555 1.33 LINK C MSE A 251 N GLU A 252 1555 1555 1.31 SITE 1 AC1 11 ARG A 3 SER A 48 SER A 112 LYS A 215 SITE 2 AC1 11 THR A 216 GLY A 217 SER A 218 PO4 A 302 SITE 3 AC1 11 HOH A 413 HOH A 474 HOH A 561 SITE 1 AC2 9 GLN A 7 GLY A 198 LYS A 201 THR A 216 SITE 2 AC2 9 PO4 A 301 HOH A 431 HOH A 440 HOH A 644 SITE 3 AC2 9 HOH A 645 SITE 1 AC3 5 LYS A 106 ALA A 190 GLU A 194 HOH A 465 SITE 2 AC3 5 HOH A 672 SITE 1 AC4 7 ASP A 32 GLU A 33 THR A 34 ARG A 169 SITE 2 AC4 7 HOH A 489 HOH A 553 HOH A 691 CRYST1 55.837 62.808 87.058 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017909 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015922 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011487 0.00000