HEADER OXIDOREDUCTASE 30-SEP-16 5THX TITLE CRYSTAL STRUCTURE OF A FERREDOXIN NADP+ REDUCTASE FROM NEISSERIA TITLE 2 GONORRHOEAE WITH BOUND NADP AND FAD COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN--NADP REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA GONORRHOEAE MIA_2011_03-10; SOURCE 3 ORGANISM_TAXID: 1351790; SOURCE 4 GENE: M736_00365; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS SSGCID, NEISSERIA GONORRHOEAE, FERREDOXIN NADP+ REDUCTASE, NADP, FAD, KEYWDS 2 STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 04-OCT-23 5THX 1 REMARK REVDAT 1 19-OCT-16 5THX 0 JRNL AUTH J.N.PHAN,D.M.DRANOW,S.J.MAYCLIN,D.D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF A FERREDOXIN NADP+ REDUCTASE FROM JRNL TITL 2 NEISSERIA GONORRHOEAE WITH BOUND NADP AND FAD JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 42944 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.630 REMARK 3 FREE R VALUE TEST SET COUNT : 1988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.4073 - 3.7346 1.00 3168 164 0.1420 0.1735 REMARK 3 2 3.7346 - 2.9647 1.00 3008 148 0.1523 0.1780 REMARK 3 3 2.9647 - 2.5900 1.00 2953 162 0.1646 0.1813 REMARK 3 4 2.5900 - 2.3532 1.00 2934 140 0.1660 0.1859 REMARK 3 5 2.3532 - 2.1846 1.00 2932 145 0.1597 0.1816 REMARK 3 6 2.1846 - 2.0558 1.00 2901 140 0.1628 0.2052 REMARK 3 7 2.0558 - 1.9529 1.00 2917 125 0.1597 0.1866 REMARK 3 8 1.9529 - 1.8678 1.00 2895 138 0.1630 0.1970 REMARK 3 9 1.8678 - 1.7959 1.00 2887 146 0.1710 0.2202 REMARK 3 10 1.7959 - 1.7340 1.00 2895 124 0.1748 0.2396 REMARK 3 11 1.7340 - 1.6798 1.00 2864 140 0.1684 0.2033 REMARK 3 12 1.6798 - 1.6317 1.00 2848 144 0.1819 0.2044 REMARK 3 13 1.6317 - 1.5888 1.00 2883 142 0.1797 0.2467 REMARK 3 14 1.5888 - 1.5500 1.00 2871 130 0.1969 0.2263 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2318 REMARK 3 ANGLE : 0.909 3182 REMARK 3 CHIRALITY : 0.055 348 REMARK 3 PLANARITY : 0.005 482 REMARK 3 DIHEDRAL : 15.025 1436 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2120 -4.2527 9.2600 REMARK 3 T TENSOR REMARK 3 T11: 0.1677 T22: 0.2227 REMARK 3 T33: 0.2329 T12: -0.0678 REMARK 3 T13: -0.0218 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 2.6185 L22: 1.6035 REMARK 3 L33: 1.2619 L12: 0.1303 REMARK 3 L13: 0.5862 L23: 0.2402 REMARK 3 S TENSOR REMARK 3 S11: 0.1095 S12: 0.1304 S13: -0.2843 REMARK 3 S21: -0.0984 S22: 0.0924 S23: 0.4568 REMARK 3 S31: 0.2820 S32: -0.3093 S33: -0.1799 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5820 -1.7170 11.7669 REMARK 3 T TENSOR REMARK 3 T11: 0.1356 T22: 0.2614 REMARK 3 T33: 0.2139 T12: -0.0694 REMARK 3 T13: -0.0064 T23: 0.0318 REMARK 3 L TENSOR REMARK 3 L11: 2.6130 L22: 2.2880 REMARK 3 L33: 1.4720 L12: 0.0553 REMARK 3 L13: -0.2997 L23: -0.6871 REMARK 3 S TENSOR REMARK 3 S11: 0.0218 S12: -0.0146 S13: -0.2180 REMARK 3 S21: 0.0034 S22: 0.1250 S23: 0.4253 REMARK 3 S31: 0.3028 S32: -0.5492 S33: -0.0641 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1407 -8.4937 20.0075 REMARK 3 T TENSOR REMARK 3 T11: 0.2364 T22: 0.2359 REMARK 3 T33: 0.3075 T12: -0.0832 REMARK 3 T13: 0.0295 T23: 0.0907 REMARK 3 L TENSOR REMARK 3 L11: 2.4184 L22: 2.0253 REMARK 3 L33: 0.6128 L12: -0.4350 REMARK 3 L13: 0.7414 L23: -0.0312 REMARK 3 S TENSOR REMARK 3 S11: 0.0898 S12: -0.2444 S13: -0.4251 REMARK 3 S21: 0.1291 S22: 0.1644 S23: 0.4062 REMARK 3 S31: 0.4301 S32: -0.4697 S33: -0.2203 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5690 15.3600 5.6822 REMARK 3 T TENSOR REMARK 3 T11: 0.0983 T22: 0.1806 REMARK 3 T33: 0.1577 T12: 0.0275 REMARK 3 T13: -0.0118 T23: 0.0192 REMARK 3 L TENSOR REMARK 3 L11: 4.5240 L22: 6.9035 REMARK 3 L33: 2.0627 L12: 5.2534 REMARK 3 L13: -0.9172 L23: -2.0858 REMARK 3 S TENSOR REMARK 3 S11: -0.0619 S12: 0.1745 S13: 0.3421 REMARK 3 S21: -0.1042 S22: 0.1006 S23: 0.4426 REMARK 3 S31: -0.0241 S32: -0.1933 S33: 0.0075 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5124 8.9338 6.4458 REMARK 3 T TENSOR REMARK 3 T11: 0.0729 T22: 0.1372 REMARK 3 T33: 0.1134 T12: 0.0129 REMARK 3 T13: -0.0020 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.9140 L22: 2.6713 REMARK 3 L33: 3.5703 L12: 0.4918 REMARK 3 L13: 0.5710 L23: -0.3787 REMARK 3 S TENSOR REMARK 3 S11: -0.0228 S12: 0.1772 S13: 0.0812 REMARK 3 S21: -0.1227 S22: -0.0506 S23: 0.0192 REMARK 3 S31: -0.0415 S32: 0.0202 S33: 0.0704 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2371 -3.0270 8.3434 REMARK 3 T TENSOR REMARK 3 T11: 0.1723 T22: 0.1473 REMARK 3 T33: 0.1514 T12: 0.0113 REMARK 3 T13: -0.0059 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.9042 L22: 0.9297 REMARK 3 L33: 8.7506 L12: -0.4274 REMARK 3 L13: 2.6240 L23: -1.2043 REMARK 3 S TENSOR REMARK 3 S11: 0.1970 S12: 0.2039 S13: -0.1321 REMARK 3 S21: -0.1200 S22: -0.0744 S23: 0.0198 REMARK 3 S31: 0.7647 S32: 0.2492 S33: -0.1378 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9049 5.1242 4.3623 REMARK 3 T TENSOR REMARK 3 T11: 0.1086 T22: 0.1908 REMARK 3 T33: 0.1655 T12: 0.0125 REMARK 3 T13: 0.0255 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 2.7778 L22: 1.7597 REMARK 3 L33: 7.1340 L12: 0.4369 REMARK 3 L13: 4.3763 L23: 0.8416 REMARK 3 S TENSOR REMARK 3 S11: 0.0626 S12: 0.4027 S13: -0.0805 REMARK 3 S21: -0.1512 S22: 0.0524 S23: -0.1885 REMARK 3 S31: 0.1894 S32: 0.5509 S33: -0.1068 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.6763 13.0413 15.5132 REMARK 3 T TENSOR REMARK 3 T11: 0.1130 T22: 0.1624 REMARK 3 T33: 0.2085 T12: -0.0147 REMARK 3 T13: -0.0378 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 0.9301 L22: 0.9924 REMARK 3 L33: 1.9902 L12: -0.7083 REMARK 3 L13: 1.1536 L23: -0.8261 REMARK 3 S TENSOR REMARK 3 S11: -0.1386 S12: 0.1383 S13: 0.2218 REMARK 3 S21: 0.0914 S22: -0.1194 S23: -0.2782 REMARK 3 S31: -0.1236 S32: 0.2127 S33: 0.2615 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4745 18.4183 17.2474 REMARK 3 T TENSOR REMARK 3 T11: 0.1138 T22: 0.1495 REMARK 3 T33: 0.1074 T12: 0.0334 REMARK 3 T13: -0.0040 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 2.5366 L22: 3.7499 REMARK 3 L33: 2.2647 L12: 0.1318 REMARK 3 L13: 0.5600 L23: -0.7864 REMARK 3 S TENSOR REMARK 3 S11: -0.1097 S12: -0.1657 S13: 0.0661 REMARK 3 S21: 0.2239 S22: 0.0112 S23: 0.0417 REMARK 3 S31: -0.0926 S32: 0.0075 S33: 0.0918 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5THX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1000224271. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43054 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.530 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.990 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3CRZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS (274695 A1): 10% W/V PEG 20 REMARK 280 000, 20% V/V PEG MME 550, 0.3 M MGCL2, 0.3 M CACL, 0.1 M MES/ REMARK 280 IMIDAZOLE PH 6.5 DIRECT CRYO; PROTEIN CONCENTRATION: 20.5 MG/ML; REMARK 280 PUCK ID: IFB3-8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.13500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.00500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.00500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 118.70250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.00500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.00500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.56750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.00500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.00500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 118.70250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.00500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.00500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.56750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 79.13500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 28 CG CD OE1 OE2 REMARK 470 ASP A 45 CG OD1 OD2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 LYS A 94 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 242 147.20 -170.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-NEGOA.00101.A RELATED DB: TARGETTRACK DBREF1 5THX A 1 258 UNP A0A0M3GW31_NEIGO DBREF2 5THX A A0A0M3GW31 1 258 SEQADV 5THX MET A -7 UNP A0A0M3GW3 INITIATING METHIONINE SEQADV 5THX ALA A -6 UNP A0A0M3GW3 EXPRESSION TAG SEQADV 5THX HIS A -5 UNP A0A0M3GW3 EXPRESSION TAG SEQADV 5THX HIS A -4 UNP A0A0M3GW3 EXPRESSION TAG SEQADV 5THX HIS A -3 UNP A0A0M3GW3 EXPRESSION TAG SEQADV 5THX HIS A -2 UNP A0A0M3GW3 EXPRESSION TAG SEQADV 5THX HIS A -1 UNP A0A0M3GW3 EXPRESSION TAG SEQADV 5THX HIS A 0 UNP A0A0M3GW3 EXPRESSION TAG SEQRES 1 A 266 MET ALA HIS HIS HIS HIS HIS HIS MET ALA ALA PHE ASN SEQRES 2 A 266 THR GLN LYS VAL LEU SER VAL HIS HIS TRP THR ASP ALA SEQRES 3 A 266 TYR PHE THR PHE THR CYS ILE ARG ASP GLU SER LEU ARG SEQRES 4 A 266 PHE GLU ASN GLY GLN PHE VAL MET VAL GLY LEU MET ALA SEQRES 5 A 266 ASP GLY LYS PRO LEU MET ARG ALA TYR SER VAL ALA SER SEQRES 6 A 266 ALA ASN TRP GLU GLU HIS LEU GLU PHE PHE SER ILE LYS SEQRES 7 A 266 VAL GLN ASP GLY PRO LEU THR SER ARG LEU GLN HIS LEU SEQRES 8 A 266 LYS VAL GLY ASP GLU VAL LEU ILE SER LYS LYS PRO THR SEQRES 9 A 266 GLY THR LEU VAL ALA CYS ASP LEU ASN PRO GLY LYS HIS SEQRES 10 A 266 LEU TYR LEU LEU SER THR GLY THR GLY ILE ALA PRO PHE SEQRES 11 A 266 LEU SER ILE THR LYS ASP PRO GLU ILE TYR GLU GLN PHE SEQRES 12 A 266 GLU LYS ILE ILE LEU VAL HIS GLY VAL ARG TYR LYS LYS SEQRES 13 A 266 ASP LEU ALA TYR TYR ASP ARG PHE THR LYS GLU LEU PRO SEQRES 14 A 266 GLU HIS GLU TYR LEU GLY ASP LEU VAL LYS GLU LYS LEU SEQRES 15 A 266 ILE TYR TYR PRO ILE VAL SER ARG GLU GLU PHE GLU HIS SEQRES 16 A 266 ARG GLY ARG LEU THR ASP LEU MET VAL SER GLY LYS LEU SEQRES 17 A 266 PHE GLU ASP ILE GLY LEU PRO LYS ILE ASN PRO GLN ASP SEQRES 18 A 266 ASP ARG ALA MET LEU CYS GLY SER PRO ALA MET LEU LYS SEQRES 19 A 266 ASP THR CYS LYS VAL LEU ASP ASP PHE GLY LEU THR VAL SEQRES 20 A 266 SER PRO LYS THR GLY VAL ARG GLY ASP TYR LEU ILE GLU SEQRES 21 A 266 ARG ALA PHE VAL ASP GLN HET NAP A 301 48 HET MG A 302 1 HET FAD A 303 106 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM MG MAGNESIUM ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 MG MG 2+ FORMUL 4 FAD C27 H33 N9 O15 P2 FORMUL 5 HOH *361(H2 O) HELIX 1 AA1 LEU A 76 GLN A 81 1 6 HELIX 2 AA2 VAL A 100 LEU A 104 5 5 HELIX 3 AA3 ILE A 119 THR A 126 1 8 HELIX 4 AA4 ASP A 128 PHE A 135 1 8 HELIX 5 AA5 TYR A 146 LEU A 150 5 5 HELIX 6 AA6 TYR A 152 LYS A 158 1 7 HELIX 7 AA7 GLU A 159 HIS A 163 5 5 HELIX 8 AA8 LEU A 166 LYS A 171 1 6 HELIX 9 AA9 ARG A 190 SER A 197 1 8 HELIX 10 AB1 GLY A 198 GLY A 205 1 8 HELIX 11 AB2 SER A 221 PHE A 235 1 15 SHEET 1 AA1 6 LYS A 47 SER A 54 0 SHEET 2 AA1 6 PHE A 37 ALA A 44 -1 N ALA A 44 O LYS A 47 SHEET 3 AA1 6 GLU A 88 SER A 92 -1 O LEU A 90 N GLY A 41 SHEET 4 AA1 6 PHE A 4 HIS A 14 -1 N ASN A 5 O ILE A 91 SHEET 5 AA1 6 TYR A 19 ILE A 25 -1 O THR A 21 N HIS A 13 SHEET 6 AA1 6 HIS A 63 ILE A 69 -1 O SER A 68 N PHE A 20 SHEET 1 AA2 5 LEU A 174 VAL A 180 0 SHEET 2 AA2 5 LYS A 137 VAL A 144 1 N LEU A 140 O TYR A 177 SHEET 3 AA2 5 HIS A 109 THR A 115 1 N LEU A 112 O ILE A 139 SHEET 4 AA2 5 ASP A 214 GLY A 220 1 O MET A 217 N LEU A 113 SHEET 5 AA2 5 TYR A 249 ARG A 253 1 O LEU A 250 N LEU A 218 SITE 1 AC1 34 ALA A 18 TYR A 19 THR A 115 GLY A 143 SITE 2 AC1 34 VAL A 144 ARG A 145 TYR A 146 LYS A 148 SITE 3 AC1 34 ASP A 149 GLU A 164 TYR A 165 ASP A 168 SITE 4 AC1 34 SER A 181 ARG A 182 ARG A 190 ALA A 223 SITE 5 AC1 34 MET A 224 ASP A 227 FAD A 303 HOH A 436 SITE 6 AC1 34 HOH A 442 HOH A 447 HOH A 449 HOH A 456 SITE 7 AC1 34 HOH A 457 HOH A 472 HOH A 478 HOH A 501 SITE 8 AC1 34 HOH A 551 HOH A 562 HOH A 563 HOH A 576 SITE 9 AC1 34 HOH A 589 HOH A 635 SITE 1 AC2 4 ARG A 26 ARG A 31 PHE A 32 ASN A 59 SITE 1 AC3 32 ARG A 51 ALA A 52 TYR A 53 SER A 54 SITE 2 AC3 32 PHE A 67 SER A 68 ILE A 69 VAL A 71 SITE 3 AC3 32 GLY A 74 PRO A 75 LEU A 76 THR A 77 SITE 4 AC3 32 THR A 117 ALA A 120 VAL A 196 LYS A 208 SITE 5 AC3 32 ARG A 253 ALA A 254 PHE A 255 VAL A 256 SITE 6 AC3 32 ASP A 257 GLN A 258 NAP A 301 HOH A 404 SITE 7 AC3 32 HOH A 408 HOH A 409 HOH A 410 HOH A 411 SITE 8 AC3 32 HOH A 473 HOH A 503 HOH A 561 HOH A 589 CRYST1 60.010 60.010 158.270 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016664 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016664 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006318 0.00000