HEADER HYDROLASE 02-OCT-16 5TIF TITLE X-RAY STRUCTURE OF ACYL-COA THIOESTERASE I, TESA, TRIPLE MUTANT TITLE 2 M141L/Y145K/L146K IN COMPLEX WITH OCTANOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL-COA THIOESTERASE I; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 28-208; COMPND 5 SYNONYM: LECITHINASE B,LYSOPHOSPHOLIPASE L1,PROTEASE I; COMPND 6 EC: 3.1.2.-,3.1.1.5; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: TESA, APEA, PLDC, B0494, JW0483; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3) KEYWDS THIOESTERASE, TESA, FATTY ACID, OCTANOIC ACID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.B.THODEN,H.M.HOLDEN,M.J.GRISEWOOD,N.J.HERNANDEZ LOZADA,N.P.GIFFORD, AUTHOR 2 D.MENDEZ-PEREZ,H.A.SCHOENBERGER,M.F.ALLAN,B.F.PFLEGER,C.D.MARINES REVDAT 5 04-OCT-23 5TIF 1 REMARK REVDAT 4 25-DEC-19 5TIF 1 REMARK REVDAT 3 14-FEB-18 5TIF 1 JRNL REVDAT 2 27-SEP-17 5TIF 1 REMARK REVDAT 1 26-APR-17 5TIF 0 JRNL AUTH M.J.GRISEWOOD,N.J.HERNANDEZ LOZADA,J.B.THODEN,N.P.GIFFORD, JRNL AUTH 2 D.MENDEZ-PEREZ,H.A.SCHOENBERGER,M.F.ALLAN,M.E.FLOY,R.Y.LAI, JRNL AUTH 3 H.M.HOLDEN,B.F.PFLEGER,C.D.MARANAS JRNL TITL COMPUTATIONAL REDESIGN OF ACYL-ACP THIOESTERASE WITH JRNL TITL 2 IMPROVED SELECTIVITY TOWARD MEDIUM-CHAIN-LENGTH FATTY ACIDS. JRNL REF ACS CATAL V. 7 3837 2017 JRNL REFN ESSN 2155-5435 JRNL PMID 29375928 JRNL DOI 10.1021/ACSCATAL.7B00408 REMARK 2 REMARK 2 RESOLUTION. 0.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0124 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 97699 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.123 REMARK 3 R VALUE (WORKING SET) : 0.122 REMARK 3 FREE R VALUE : 0.137 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5137 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 0.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6343 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 343 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1440 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 422 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : -0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.18000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.019 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.019 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.014 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.623 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.984 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.980 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1606 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1575 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2194 ; 2.012 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3633 ; 1.533 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 209 ; 6.024 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;36.083 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 274 ;13.351 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;17.684 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 237 ; 0.138 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1852 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 376 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 776 ; 2.136 ; 1.065 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 775 ; 2.028 ; 1.057 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 975 ; 2.661 ; 1.598 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 976 ; 2.675 ; 1.605 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 830 ; 7.085 ; 1.517 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 830 ; 7.085 ; 1.517 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1210 ; 6.679 ; 2.100 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2372 ; 9.682 ;14.077 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2373 ; 9.682 ;14.085 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3181 ; 7.680 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 51 ;76.848 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3515 ;19.723 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5TIF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1000224312. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MONTEL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102836 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.00600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.27800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5TID REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-25% PEG-5000, 100 MM HOMOPIPES, 3 REMARK 280 MM OCTANOIC ACID, PH 5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.50000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 SER A 182 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 181 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 466 O HOH A 504 1.56 REMARK 500 O HOH A 326 O HOH A 586 1.74 REMARK 500 O HOH A 366 O HOH A 452 1.82 REMARK 500 O HOH A 361 O HOH A 418 1.85 REMARK 500 O HOH A 544 O HOH A 616 1.89 REMARK 500 O HOH A 305 O HOH A 448 1.92 REMARK 500 O HOH A 680 O HOH A 685 1.94 REMARK 500 O HOH A 301 O HOH A 496 1.94 REMARK 500 O ALA A 111 O HOH A 301 2.00 REMARK 500 O HOH A 606 O HOH A 653 2.05 REMARK 500 O HOH A 418 O HOH A 422 2.06 REMARK 500 O ALA A 111 O HOH A 302 2.10 REMARK 500 O HOH A 663 O HOH A 671 2.12 REMARK 500 O HOH A 441 O HOH A 502 2.14 REMARK 500 OD1 ASN A 112 O HOH A 303 2.15 REMARK 500 ND2 ASN A 112 O HOH A 303 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CE2 PHE A 79 O HOH A 710 2846 1.33 REMARK 500 CD2 PHE A 79 O HOH A 710 2846 1.68 REMARK 500 O HOH A 302 O HOH A 483 2846 1.83 REMARK 500 O HOH A 665 O HOH A 695 1455 1.96 REMARK 500 O HOH A 649 O HOH A 695 1455 2.00 REMARK 500 O HOH A 326 O HOH A 538 2756 2.00 REMARK 500 O HOH A 569 O HOH A 586 2746 2.05 REMARK 500 O HOH A 351 O HOH A 586 2746 2.14 REMARK 500 O HOH A 330 O HOH A 483 2846 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 137 CB - CG - CD1 ANGL. DEV. = 10.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 9 -155.21 -114.18 REMARK 500 GLN A 32 61.26 35.84 REMARK 500 ASN A 112 -101.35 -141.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 675 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 676 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 677 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 678 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 679 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A 680 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A 681 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A 682 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A 683 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A 684 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A 685 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A 686 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A 687 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A 688 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A 689 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A 690 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A 691 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH A 692 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH A 693 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A 694 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH A 695 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH A 696 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH A 697 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH A 698 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH A 699 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH A 700 DISTANCE = 6.83 ANGSTROMS REMARK 525 HOH A 701 DISTANCE = 6.83 ANGSTROMS REMARK 525 HOH A 702 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH A 703 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH A 704 DISTANCE = 6.88 ANGSTROMS REMARK 525 HOH A 705 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH A 706 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH A 707 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH A 708 DISTANCE = 7.14 ANGSTROMS REMARK 525 HOH A 709 DISTANCE = 7.26 ANGSTROMS REMARK 525 HOH A 710 DISTANCE = 7.34 ANGSTROMS REMARK 525 HOH A 711 DISTANCE = 7.37 ANGSTROMS REMARK 525 HOH A 712 DISTANCE = 7.50 ANGSTROMS REMARK 525 HOH A 713 DISTANCE = 7.57 ANGSTROMS REMARK 525 HOH A 714 DISTANCE = 7.57 ANGSTROMS REMARK 525 HOH A 715 DISTANCE = 7.84 ANGSTROMS REMARK 525 HOH A 716 DISTANCE = 8.06 ANGSTROMS REMARK 525 HOH A 717 DISTANCE = 8.08 ANGSTROMS REMARK 525 HOH A 718 DISTANCE = 8.54 ANGSTROMS REMARK 525 HOH A 719 DISTANCE = 8.64 ANGSTROMS REMARK 525 HOH A 720 DISTANCE = 8.64 ANGSTROMS REMARK 525 HOH A 721 DISTANCE = 8.88 ANGSTROMS REMARK 525 HOH A 722 DISTANCE = 9.50 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OCA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TIC RELATED DB: PDB REMARK 900 WILD-TYPE ENZYME AT PH 5 REMARK 900 RELATED ID: 5TID RELATED DB: PDB REMARK 900 MUTANT ENZYME AT PH 5 REMARK 900 RELATED ID: 5TIE RELATED DB: PDB REMARK 900 MUTANT ENZYME AT PH 7.5 DBREF 5TIF A 2 182 UNP P0ADA1 TESA_ECOLI 28 208 SEQADV 5TIF GLY A -2 UNP P0ADA1 EXPRESSION TAG SEQADV 5TIF GLY A -1 UNP P0ADA1 EXPRESSION TAG SEQADV 5TIF GLY A 0 UNP P0ADA1 EXPRESSION TAG SEQADV 5TIF MET A 1 UNP P0ADA1 EXPRESSION TAG SEQADV 5TIF LEU A 141 UNP P0ADA1 MET 167 ENGINEERED MUTATION SEQADV 5TIF LYS A 145 UNP P0ADA1 TYR 171 ENGINEERED MUTATION SEQADV 5TIF LYS A 146 UNP P0ADA1 LEU 172 ENGINEERED MUTATION SEQRES 1 A 185 GLY GLY GLY MET ASP THR LEU LEU ILE LEU GLY ASP SER SEQRES 2 A 185 LEU SER ALA GLY TYR ARG MET SER ALA SER ALA ALA TRP SEQRES 3 A 185 PRO ALA LEU LEU ASN ASP LYS TRP GLN SER LYS THR SER SEQRES 4 A 185 VAL VAL ASN ALA SER ILE SER GLY ASP THR SER GLN GLN SEQRES 5 A 185 GLY LEU ALA ARG LEU PRO ALA LEU LEU LYS GLN HIS GLN SEQRES 6 A 185 PRO ARG TRP VAL LEU VAL GLU LEU GLY GLY ASN ASP GLY SEQRES 7 A 185 LEU ARG GLY PHE GLN PRO GLN GLN THR GLU GLN THR LEU SEQRES 8 A 185 ARG GLN ILE LEU GLN ASP VAL LYS ALA ALA ASN ALA GLU SEQRES 9 A 185 PRO LEU LEU MET GLN ILE ARG LEU PRO ALA ASN TYR GLY SEQRES 10 A 185 ARG ARG TYR ASN GLU ALA PHE SER ALA ILE TYR PRO LYS SEQRES 11 A 185 LEU ALA LYS GLU PHE ASP VAL PRO LEU LEU PRO PHE PHE SEQRES 12 A 185 LEU GLU GLU VAL LYS LYS LYS PRO GLN TRP MET GLN ASP SEQRES 13 A 185 ASP GLY ILE HIS PRO ASN ARG ASP ALA GLN PRO PHE ILE SEQRES 14 A 185 ALA ASP TRP MET ALA LYS GLN LEU GLN PRO LEU VAL ASN SEQRES 15 A 185 HIS ASP SER HET OCA A 201 10 HET PEG A 202 7 HETNAM OCA OCTANOIC ACID (CAPRYLIC ACID) HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 2 OCA C8 H16 O2 FORMUL 3 PEG C4 H10 O3 FORMUL 4 HOH *422(H2 O) HELIX 1 AA1 ASP A 9 GLY A 14 1 6 HELIX 2 AA2 SER A 18 ALA A 21 5 4 HELIX 3 AA3 ALA A 22 GLN A 32 1 11 HELIX 4 AA4 THR A 46 GLN A 62 1 17 HELIX 5 AA5 GLY A 71 ARG A 77 1 7 HELIX 6 AA6 GLN A 80 ALA A 98 1 19 HELIX 7 AA7 GLY A 114 ASP A 133 1 20 HELIX 8 AA8 PHE A 140 LYS A 146 1 7 HELIX 9 AA9 LYS A 147 MET A 151 5 5 HELIX 10 AB1 ASP A 161 ASN A 179 1 19 SHEET 1 AA1 5 THR A 35 SER A 41 0 SHEET 2 AA1 5 ASP A 2 GLY A 8 1 N LEU A 4 O SER A 36 SHEET 3 AA1 5 TRP A 65 GLU A 69 1 O LEU A 67 N LEU A 7 SHEET 4 AA1 5 GLU A 101 MET A 105 1 O LEU A 103 N VAL A 68 SHEET 5 AA1 5 LEU A 136 LEU A 137 1 O LEU A 137 N LEU A 104 SITE 1 AC1 11 ASP A 9 SER A 10 LEU A 11 GLY A 44 SITE 2 AC1 11 ASN A 73 LEU A 76 ARG A 108 PRO A 110 SITE 3 AC1 11 HIS A 157 HOH A 336 HOH A 484 SITE 1 AC2 6 PHE A 139 PHE A 140 GLU A 143 PHE A 165 SITE 2 AC2 6 TRP A 169 HOH A 309 CRYST1 40.500 55.000 42.000 90.00 104.90 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024691 0.000000 0.006570 0.00000 SCALE2 0.000000 0.018182 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024638 0.00000