HEADER VIRAL PROTEIN/IMMUNE SYSTEM 05-OCT-16 5TJW TITLE INFLUENZA A VIRUS NUCLEOPROTEIN IN COMPLEX WITH INHIBITORY NANOBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NP-SPECIFIC INHIBITORY VHH; COMPND 7 CHAIN: K; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/WSN/1933(H1N1)); SOURCE 3 ORGANISM_TAXID: 382835; SOURCE 4 STRAIN: A/WSN/1933(H1N1); SOURCE 5 GENE: NP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30B+; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 12 ORGANISM_TAXID: 30538; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: WK6; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PHEN-6 KEYWDS INFLUENZA, NUCLEOPROTEIN, VHH, INHIBITORY, VIRAL PROTEIN-IMMUNE KEYWDS 2 SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.HANKE,K.E.KNOCKENHAUER,H.L.PLOEGH,T.U.SCHWARTZ REVDAT 4 04-OCT-23 5TJW 1 REMARK REVDAT 3 01-NOV-17 5TJW 1 REMARK REVDAT 2 04-JAN-17 5TJW 1 JRNL REVDAT 1 21-DEC-16 5TJW 0 JRNL AUTH L.HANKE,K.E.KNOCKENHAUER,R.C.BREWER,E.VAN DIEST,F.I.SCHMIDT, JRNL AUTH 2 T.U.SCHWARTZ,H.L.PLOEGH JRNL TITL THE ANTIVIRAL MECHANISM OF AN INFLUENZA A VIRUS JRNL TITL 2 NUCLEOPROTEIN-SPECIFIC SINGLE-DOMAIN ANTIBODY FRAGMENT. JRNL REF MBIO V. 7 2016 JRNL REFN ESSN 2150-7511 JRNL PMID 27965447 JRNL DOI 10.1128/MBIO.01569-16 REMARK 2 REMARK 2 RESOLUTION. 3.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11_2567: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 97.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 14188 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1419 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 97.3052 - 6.9608 1.00 1355 150 0.1862 0.2377 REMARK 3 2 6.9608 - 5.5251 1.00 1281 144 0.2279 0.2912 REMARK 3 3 5.5251 - 4.8268 1.00 1299 143 0.1897 0.2525 REMARK 3 4 4.8268 - 4.3854 1.00 1255 135 0.1741 0.2092 REMARK 3 5 4.3854 - 4.0711 1.00 1280 142 0.1871 0.2343 REMARK 3 6 4.0711 - 3.8311 1.00 1265 141 0.1994 0.2647 REMARK 3 7 3.8311 - 3.6392 1.00 1261 141 0.2225 0.2797 REMARK 3 8 3.6392 - 3.4808 1.00 1256 136 0.2365 0.2900 REMARK 3 9 3.4808 - 3.3468 1.00 1252 142 0.2469 0.3346 REMARK 3 10 3.3468 - 3.2313 1.00 1265 145 0.2716 0.3534 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4686 REMARK 3 ANGLE : 0.633 6312 REMARK 3 CHIRALITY : 0.047 678 REMARK 3 PLANARITY : 0.003 833 REMARK 3 DIHEDRAL : 9.192 2841 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TJW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1000224335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9778 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14189 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.220 REMARK 200 RESOLUTION RANGE LOW (A) : 97.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : 0.17800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2IQH, 4KRL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 1.5 M AMMONIUM REMARK 280 SULFATE, 0.025% (V/V) DICHLOROMETHANE, PH 5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 68.77400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.77400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 68.77400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.77400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 68.77400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 68.77400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 68.77400 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 68.77400 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 68.77400 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 68.77400 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 68.77400 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 68.77400 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 68.77400 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 68.77400 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 68.77400 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 68.77400 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 68.77400 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 68.77400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: HEXAMER CONFIRMED BY GEL FILTRATION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, K REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 68.77400 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 68.77400 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, K REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -68.77400 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 68.77400 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 GLY A 5 REMARK 465 THR A 6 REMARK 465 LYS A 7 REMARK 465 ARG A 8 REMARK 465 SER A 9 REMARK 465 TYR A 10 REMARK 465 GLU A 11 REMARK 465 GLN A 12 REMARK 465 MET A 13 REMARK 465 GLU A 14 REMARK 465 THR A 15 REMARK 465 ASP A 16 REMARK 465 GLY A 17 REMARK 465 GLU A 18 REMARK 465 ARG A 19 REMARK 465 GLN A 20 REMARK 465 MET A 481 REMARK 465 SER A 482 REMARK 465 ASN A 483 REMARK 465 ASP A 491 REMARK 465 ASN A 492 REMARK 465 ALA A 493 REMARK 465 GLU A 494 REMARK 465 GLU A 495 REMARK 465 TYR A 496 REMARK 465 ASP A 497 REMARK 465 ASN A 498 REMARK 465 GLY A 499 REMARK 465 LEU A 500 REMARK 465 GLU A 501 REMARK 465 HIS A 502 REMARK 465 HIS A 503 REMARK 465 HIS A 504 REMARK 465 HIS A 505 REMARK 465 HIS A 506 REMARK 465 HIS A 507 REMARK 465 SER K 124 REMARK 465 GLY K 125 REMARK 465 GLY K 126 REMARK 465 LEU K 127 REMARK 465 PRO K 128 REMARK 465 GLU K 129 REMARK 465 THR K 130 REMARK 465 GLY K 131 REMARK 465 GLY K 132 REMARK 465 HIS K 133 REMARK 465 HIS K 134 REMARK 465 HIS K 135 REMARK 465 HIS K 136 REMARK 465 HIS K 137 REMARK 465 HIS K 138 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 78 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS A 82 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 204 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 207 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 207 CZ3 CH2 REMARK 470 GLU K 45 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 47 NH2 ARG A 98 2.11 REMARK 500 OG1 THR A 378 OD2 ASP K 112 2.12 REMARK 500 OE2 GLU A 375 OG SER K 104 2.17 REMARK 500 O ALA A 153 OG1 THR A 157 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL K 122 CB VAL K 122 CG1 0.144 REMARK 500 SER K 123 CB SER K 123 OG 0.133 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 48 61.28 65.74 REMARK 500 ASP A 101 -105.58 54.28 REMARK 500 ASN A 124 52.25 -112.72 REMARK 500 MET A 167 37.17 -98.35 REMARK 500 ILE A 265 -67.16 -101.77 REMARK 500 SER A 335 16.51 58.28 REMARK 500 ALA A 336 34.71 -83.48 REMARK 500 ARG A 361 -159.96 -119.15 REMARK 500 GLN A 399 73.43 -163.98 REMARK 500 GLU A 434 39.84 -91.62 REMARK 500 VAL K 49 -64.79 -123.08 REMARK 500 REMARK 500 REMARK: NULL DBREF 5TJW A 1 498 UNP B4URF1 B4URF1_9INFA 1 498 DBREF 5TJW K 2 138 PDB 5TJW 5TJW 2 138 SEQADV 5TJW GLY A 499 UNP B4URF1 EXPRESSION TAG SEQADV 5TJW LEU A 500 UNP B4URF1 EXPRESSION TAG SEQADV 5TJW GLU A 501 UNP B4URF1 EXPRESSION TAG SEQADV 5TJW HIS A 502 UNP B4URF1 EXPRESSION TAG SEQADV 5TJW HIS A 503 UNP B4URF1 EXPRESSION TAG SEQADV 5TJW HIS A 504 UNP B4URF1 EXPRESSION TAG SEQADV 5TJW HIS A 505 UNP B4URF1 EXPRESSION TAG SEQADV 5TJW HIS A 506 UNP B4URF1 EXPRESSION TAG SEQADV 5TJW HIS A 507 UNP B4URF1 EXPRESSION TAG SEQRES 1 A 507 MET ALA THR LYS GLY THR LYS ARG SER TYR GLU GLN MET SEQRES 2 A 507 GLU THR ASP GLY GLU ARG GLN ASN ALA THR GLU ILE ARG SEQRES 3 A 507 ALA SER VAL GLY LYS MET ILE ASP GLY ILE GLY ARG PHE SEQRES 4 A 507 TYR ILE GLN MET CYS THR GLU LEU LYS LEU SER ASP TYR SEQRES 5 A 507 GLU GLY ARG LEU ILE GLN ASN SER LEU THR ILE GLU ARG SEQRES 6 A 507 MET VAL LEU SER ALA PHE ASP GLU ARG ARG ASN LYS TYR SEQRES 7 A 507 LEU GLU GLU HIS PRO SER ALA GLY LYS ASP PRO LYS LYS SEQRES 8 A 507 THR GLY GLY PRO ILE TYR ARG ARG VAL ASP GLY LYS TRP SEQRES 9 A 507 ARG ARG GLU LEU ILE LEU TYR ASP LYS GLU GLU ILE ARG SEQRES 10 A 507 ARG ILE TRP ARG GLN ALA ASN ASN GLY ASP ASP ALA THR SEQRES 11 A 507 ALA GLY LEU THR HIS MET MET ILE TRP HIS SER ASN LEU SEQRES 12 A 507 ASN ASP ALA THR TYR GLN ARG THR ARG ALA LEU VAL ARG SEQRES 13 A 507 THR GLY MET ASP PRO ARG MET CYS SER LEU MET GLN GLY SEQRES 14 A 507 SER THR LEU PRO ARG ARG SER GLY ALA ALA GLY ALA ALA SEQRES 15 A 507 VAL LYS GLY VAL GLY THR MET VAL MET GLU LEU ILE ARG SEQRES 16 A 507 MET ILE LYS ARG GLY ILE ASN ASP ARG ASN PHE TRP ARG SEQRES 17 A 507 GLY GLU ASN GLY ARG ARG THR ARG ILE ALA TYR GLU ARG SEQRES 18 A 507 MET CYS ASN ILE LEU LYS GLY LYS PHE GLN THR ALA ALA SEQRES 19 A 507 GLN ARG THR MET VAL ASP GLN VAL ARG GLU SER ARG ASN SEQRES 20 A 507 PRO GLY ASN ALA GLU PHE GLU ASP LEU ILE PHE LEU ALA SEQRES 21 A 507 ARG SER ALA LEU ILE LEU ARG GLY SER VAL ALA HIS LYS SEQRES 22 A 507 SER CYS LEU PRO ALA CYS VAL TYR GLY SER ALA VAL ALA SEQRES 23 A 507 SER GLY TYR ASP PHE GLU ARG GLU GLY TYR SER LEU VAL SEQRES 24 A 507 GLY ILE ASP PRO PHE ARG LEU LEU GLN ASN SER GLN VAL SEQRES 25 A 507 TYR SER LEU ILE ARG PRO ASN GLU ASN PRO ALA HIS LYS SEQRES 26 A 507 SER GLN LEU VAL TRP MET ALA CYS HIS SER ALA ALA PHE SEQRES 27 A 507 GLU ASP LEU ARG VAL SER SER PHE ILE ARG GLY THR LYS SEQRES 28 A 507 VAL VAL PRO ARG GLY LYS LEU SER THR ARG GLY VAL GLN SEQRES 29 A 507 ILE ALA SER ASN GLU ASN MET GLU THR MET GLU SER SER SEQRES 30 A 507 THR LEU GLU LEU ARG SER ARG TYR TRP ALA ILE ARG THR SEQRES 31 A 507 ARG SER GLY GLY ASN THR ASN GLN GLN ARG ALA SER SER SEQRES 32 A 507 GLY GLN ILE SER ILE GLN PRO THR PHE SER VAL GLN ARG SEQRES 33 A 507 ASN LEU PRO PHE ASP ARG PRO THR ILE MET ALA ALA PHE SEQRES 34 A 507 THR GLY ASN THR GLU GLY ARG THR SER ASP MET ARG THR SEQRES 35 A 507 GLU ILE ILE ARG LEU MET GLU SER ALA ARG PRO GLU ASP SEQRES 36 A 507 VAL SER PHE GLN GLY ARG GLY VAL PHE GLU LEU SER ASP SEQRES 37 A 507 GLU LYS ALA THR SER PRO ILE VAL PRO SER PHE ASP MET SEQRES 38 A 507 SER ASN GLU GLY SER TYR PHE PHE GLY ASP ASN ALA GLU SEQRES 39 A 507 GLU TYR ASP ASN GLY LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 K 137 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 K 137 ALA GLY GLY SER LEU ARG LEU THR CYS ALA LEU SER GLU SEQRES 3 K 137 ARG THR SER THR SER TYR ALA GLN GLY TRP PHE ARG GLN SEQRES 4 K 137 PRO PRO GLY LYS GLU ARG GLU PHE VAL ALA SER LEU ARG SEQRES 5 K 137 THR HIS ASP GLY ASN THR HIS TYR THR ASP SER VAL LYS SEQRES 6 K 137 GLY ARG PHE THR ILE SER ARG ASP ASN ALA GLU ASN THR SEQRES 7 K 137 LEU TYR LEU GLN MET ASN SER LEU LYS THR GLU ASP THR SEQRES 8 K 137 ALA VAL TYR TYR CYS ALA ALA SER LEU GLY TYR SER GLY SEQRES 9 K 137 ALA TYR ALA SER GLY TYR ASP TYR TRP GLY GLN GLY THR SEQRES 10 K 137 GLN VAL THR VAL SER SER GLY GLY LEU PRO GLU THR GLY SEQRES 11 K 137 GLY HIS HIS HIS HIS HIS HIS HELIX 1 AA1 ALA A 22 LYS A 48 1 27 HELIX 2 AA2 SER A 50 LEU A 56 1 7 HELIX 3 AA3 LEU A 56 PHE A 71 1 16 HELIX 4 AA4 ASP A 72 GLU A 81 1 10 HELIX 5 AA5 LYS A 113 ASN A 124 1 12 HELIX 6 AA6 ALA A 129 TYR A 148 1 20 HELIX 7 AA7 ARG A 150 GLY A 158 1 9 HELIX 8 AA8 ASP A 160 MET A 167 5 8 HELIX 9 AA9 GLY A 177 VAL A 183 1 7 HELIX 10 AB1 GLY A 185 GLY A 200 1 16 HELIX 11 AB2 GLY A 209 PHE A 230 1 22 HELIX 12 AB3 THR A 232 GLU A 244 1 13 HELIX 13 AB4 GLY A 249 ALA A 263 1 15 HELIX 14 AB5 PRO A 277 SER A 287 1 11 HELIX 15 AB6 ASP A 290 GLY A 295 1 6 HELIX 16 AB7 ILE A 301 ASN A 309 1 9 HELIX 17 AB8 ASN A 321 HIS A 334 1 14 HELIX 18 AB9 SER A 335 GLU A 339 5 5 HELIX 19 AC1 ASP A 340 GLY A 349 1 10 HELIX 20 AC2 PRO A 354 LEU A 358 5 5 HELIX 21 AC3 ASP A 421 ALA A 428 1 8 HELIX 22 AC4 THR A 437 ALA A 451 1 15 HELIX 23 AC5 SER K 26 THR K 31 1 6 HELIX 24 AC6 LYS K 88 THR K 92 5 5 HELIX 25 AC7 TYR K 107 TYR K 111 5 5 SHEET 1 AA1 2 LYS A 91 VAL A 100 0 SHEET 2 AA1 2 LYS A 103 ASP A 112 -1 O ARG A 105 N ARG A 98 SHEET 1 AA2 2 TYR A 313 ILE A 316 0 SHEET 2 AA2 2 GLU A 375 THR A 378 -1 O GLU A 375 N ILE A 316 SHEET 1 AA3 2 TYR A 385 TRP A 386 0 SHEET 2 AA3 2 PHE A 464 GLU A 465 -1 O PHE A 464 N TRP A 386 SHEET 1 AA4 4 LEU K 5 SER K 8 0 SHEET 2 AA4 4 LEU K 19 LEU K 25 -1 O THR K 22 N SER K 8 SHEET 3 AA4 4 THR K 79 MET K 84 -1 O MET K 84 N LEU K 19 SHEET 4 AA4 4 PHE K 69 ARG K 73 -1 N SER K 72 O TYR K 81 SHEET 1 AA5 6 GLY K 11 VAL K 13 0 SHEET 2 AA5 6 GLN K 119 VAL K 122 1 O THR K 121 N GLY K 11 SHEET 3 AA5 6 ALA K 93 SER K 100 -1 N ALA K 93 O VAL K 120 SHEET 4 AA5 6 ALA K 34 GLN K 40 -1 N GLY K 36 O ALA K 98 SHEET 5 AA5 6 GLU K 47 ARG K 53 -1 O GLU K 47 N ARG K 39 SHEET 6 AA5 6 THR K 59 TYR K 61 -1 O HIS K 60 N SER K 51 SHEET 1 AA6 4 GLY K 11 VAL K 13 0 SHEET 2 AA6 4 GLN K 119 VAL K 122 1 O THR K 121 N GLY K 11 SHEET 3 AA6 4 ALA K 93 SER K 100 -1 N ALA K 93 O VAL K 120 SHEET 4 AA6 4 TYR K 113 TRP K 114 -1 N TYR K 113 O ALA K 99 SSBOND 1 CYS K 23 CYS K 97 1555 1555 2.03 CRYST1 137.548 137.548 137.548 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007270 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007270 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007270 0.00000