HEADER HYDROLASE/HYDROLASE INHIBITOR 13-OCT-16 5TMK TITLE OPTIMIZATION OF 3,5-DISUBSTITUED PIPERIDINE: DISCOVERY OF NON-PEPTIDE TITLE 2 MIMETICS AS AN ORALLY ACTIVE RENIN INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: RENIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 70-406; COMPND 5 SYNONYM: ANGIOTENSINOGENASE; COMPND 6 EC: 3.4.23.15; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: REN; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK 293 KEYWDS PROTEIN-LIGAND COMPLEX, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.P.SNELL,C.A.BEHNKE,K.OKADA,O.HIDEYUKI,B.C.SANG,W.LANE REVDAT 3 16-OCT-24 5TMK 1 HETSYN REVDAT 2 29-JUL-20 5TMK 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 18-OCT-17 5TMK 0 JRNL AUTH H.TOKUHARA,Y.IMAEDA,Y.FUKASE,K.IWANAGA,N.TAYA,K.WATANABE, JRNL AUTH 2 R.KANAGAWA,K.MATSUDA,Y.KAJIMOTO,K.KUSUMOTO,M.KONDO, JRNL AUTH 3 G.P.SNELL,C.A.BEHNKE,T.KUROITA JRNL TITL OPTIMIZATION OF 3,5-DISUBSTITUED PIPERIDINE: DISCOVERY OF JRNL TITL 2 NON-PEPTIDE MIMETICS AS AN ORALLY ACTIVE RENIN INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1340 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1857 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4971 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 109 REMARK 3 SOLVENT ATOMS : 41 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.551 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.286 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.220 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.919 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5203 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7067 ; 1.270 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 657 ; 6.589 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 199 ;36.094 ;23.970 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 757 ;15.083 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;15.526 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 802 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3881 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2646 ; 1.023 ; 5.374 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3297 ; 1.738 ; 8.056 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2557 ; 1.275 ; 5.465 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 10 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 78 REMARK 3 RESIDUE RANGE : A 79 A 91 REMARK 3 RESIDUE RANGE : A 92 A 154 REMARK 3 RESIDUE RANGE : A 155 A 248 REMARK 3 RESIDUE RANGE : A 249 A 265 REMARK 3 RESIDUE RANGE : A 266 A 280 REMARK 3 RESIDUE RANGE : A 281 A 298 REMARK 3 RESIDUE RANGE : A 299 A 302 REMARK 3 RESIDUE RANGE : A 303 A 312 REMARK 3 RESIDUE RANGE : A 313 A 340 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3177 -41.0378 3.9549 REMARK 3 T TENSOR REMARK 3 T11: 0.0223 T22: 0.0582 REMARK 3 T33: 0.1190 T12: 0.0082 REMARK 3 T13: -0.0117 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 1.3375 L22: 3.8409 REMARK 3 L33: 2.5613 L12: 0.4918 REMARK 3 L13: -0.0483 L23: -1.6350 REMARK 3 S TENSOR REMARK 3 S11: -0.0461 S12: -0.0690 S13: 0.3522 REMARK 3 S21: 0.0443 S22: 0.1692 S23: 0.3605 REMARK 3 S31: -0.2084 S32: -0.0272 S33: -0.1230 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 10 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 78 REMARK 3 RESIDUE RANGE : B 79 B 91 REMARK 3 RESIDUE RANGE : B 92 B 154 REMARK 3 RESIDUE RANGE : B 155 B 248 REMARK 3 RESIDUE RANGE : B 249 B 265 REMARK 3 RESIDUE RANGE : B 266 B 280 REMARK 3 RESIDUE RANGE : B 281 B 298 REMARK 3 RESIDUE RANGE : B 299 B 302 REMARK 3 RESIDUE RANGE : B 303 B 312 REMARK 3 RESIDUE RANGE : B 313 B 340 REMARK 3 ORIGIN FOR THE GROUP (A): 34.3378 -17.0874 -12.3152 REMARK 3 T TENSOR REMARK 3 T11: 0.1244 T22: 0.0454 REMARK 3 T33: 0.1447 T12: -0.0414 REMARK 3 T13: -0.0915 T23: 0.0368 REMARK 3 L TENSOR REMARK 3 L11: 3.1691 L22: 3.0085 REMARK 3 L33: 3.1932 L12: -0.4656 REMARK 3 L13: -0.3615 L23: 1.7214 REMARK 3 S TENSOR REMARK 3 S11: -0.0510 S12: 0.2665 S13: 0.1664 REMARK 3 S21: -0.3641 S22: 0.0311 S23: 0.2158 REMARK 3 S31: -0.3660 S32: -0.0241 S33: 0.0199 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5TMK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1000224497. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26687 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.79200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23% PEG600, 0.06M CITRATE, 0.04M REMARK 280 CITRIC ACID, PH 7.9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 69.85850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.85850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.85850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.85850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 69.85850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.85850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 69.85850 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 69.85850 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 69.85850 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 69.85850 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 69.85850 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 69.85850 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 69.85850 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 69.85850 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 69.85850 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 69.85850 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 69.85850 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 69.85850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 69330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -69.85850 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 -69.85850 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 69.85850 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 -69.85850 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 167 REMARK 465 ASN A 168 REMARK 465 SER A 212 REMARK 465 SER A 213 REMARK 465 SER B 166 REMARK 465 GLU B 167 REMARK 465 ASN B 168 REMARK 465 SER B 169 REMARK 465 GLN B 170 REMARK 465 LEU B 252 REMARK 465 PHE B 253 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 5 CG OD1 ND2 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 ARG A 82 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 139 CD NE CZ NH1 NH2 REMARK 470 LYS A 154 CG CD CE NZ REMARK 470 GLU A 155 CG CD OE1 OE2 REMARK 470 GLN A 170 CG CD OE1 NE2 REMARK 470 GLN A 184 CG CD OE1 NE2 REMARK 470 GLN A 204 CG CD OE1 NE2 REMARK 470 LYS A 206 CG CD CE NZ REMARK 470 GLU A 218 CG CD OE1 OE2 REMARK 470 ASP A 219 CG OD1 OD2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 GLU A 244 CG CD OE1 OE2 REMARK 470 LYS A 249 CG CD CE NZ REMARK 470 LYS A 258 CG CD CE NZ REMARK 470 GLU A 261 CD OE1 OE2 REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 GLU A 288 CG CD OE1 OE2 REMARK 470 ARG B 53 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 54 CG CD1 CD2 REMARK 470 ASP B 65 CG OD1 OD2 REMARK 470 LYS B 73 CG CD CE NZ REMARK 470 HIS B 74 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 78 CG CD OE1 OE2 REMARK 470 LEU B 79 CG CD1 CD2 REMARK 470 ARG B 82 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 184 CG CD OE1 NE2 REMARK 470 LYS B 206 CG CD CE NZ REMARK 470 LEU B 215 CG CD1 CD2 REMARK 470 GLU B 218 CG CD OE1 OE2 REMARK 470 LYS B 241 CG CD CE NZ REMARK 470 LYS B 249 CG CD CE NZ REMARK 470 LYS B 250 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 75 -62.80 -133.58 REMARK 500 GLN A 170 51.01 -97.94 REMARK 500 ARG A 251 -156.30 -111.70 REMARK 500 ALA A 299 36.26 -89.23 REMARK 500 ASN B 5 45.92 -141.03 REMARK 500 ASN B 75 -60.02 -125.78 REMARK 500 ALA B 299 37.64 -85.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TMG RELATED DB: PDB DBREF 5TMK A 4 340 UNP P00797 RENI_HUMAN 70 406 DBREF 5TMK B 4 340 UNP P00797 RENI_HUMAN 70 406 SEQRES 1 A 337 GLY ASN THR THR SER SER VAL ILE LEU THR ASN TYR MET SEQRES 2 A 337 ASP THR GLN TYR TYR GLY GLU ILE GLY ILE GLY THR PRO SEQRES 3 A 337 PRO GLN THR PHE LYS VAL VAL PHE ASP THR GLY SER SER SEQRES 4 A 337 ASN VAL TRP VAL PRO SER SER LYS CYS SER ARG LEU TYR SEQRES 5 A 337 THR ALA CYS VAL TYR HIS LYS LEU PHE ASP ALA SER ASP SEQRES 6 A 337 SER SER SER TYR LYS HIS ASN GLY THR GLU LEU THR LEU SEQRES 7 A 337 ARG TYR SER THR GLY THR VAL SER GLY PHE LEU SER GLN SEQRES 8 A 337 ASP ILE ILE THR VAL GLY GLY ILE THR VAL THR GLN MET SEQRES 9 A 337 PHE GLY GLU VAL THR GLU MET PRO ALA LEU PRO PHE MET SEQRES 10 A 337 LEU ALA GLU PHE ASP GLY VAL VAL GLY MET GLY PHE ILE SEQRES 11 A 337 GLU GLN ALA ILE GLY ARG VAL THR PRO ILE PHE ASP ASN SEQRES 12 A 337 ILE ILE SER GLN GLY VAL LEU LYS GLU ASP VAL PHE SER SEQRES 13 A 337 PHE TYR TYR ASN ARG ASP SER GLU ASN SER GLN SER LEU SEQRES 14 A 337 GLY GLY GLN ILE VAL LEU GLY GLY SER ASP PRO GLN HIS SEQRES 15 A 337 TYR GLU GLY ASN PHE HIS TYR ILE ASN LEU ILE LYS THR SEQRES 16 A 337 GLY VAL TRP GLN ILE GLN MET LYS GLY VAL SER VAL GLY SEQRES 17 A 337 SER SER THR LEU LEU CYS GLU ASP GLY CYS LEU ALA LEU SEQRES 18 A 337 VAL ASP THR GLY ALA SER TYR ILE SER GLY SER THR SER SEQRES 19 A 337 SER ILE GLU LYS LEU MET GLU ALA LEU GLY ALA LYS LYS SEQRES 20 A 337 ARG LEU PHE ASP TYR VAL VAL LYS CYS ASN GLU GLY PRO SEQRES 21 A 337 THR LEU PRO ASP ILE SER PHE HIS LEU GLY GLY LYS GLU SEQRES 22 A 337 TYR THR LEU THR SER ALA ASP TYR VAL PHE GLN GLU SER SEQRES 23 A 337 TYR SER SER LYS LYS LEU CYS THR LEU ALA ILE HIS ALA SEQRES 24 A 337 MET ASP ILE PRO PRO PRO THR GLY PRO THR TRP ALA LEU SEQRES 25 A 337 GLY ALA THR PHE ILE ARG LYS PHE TYR THR GLU PHE ASP SEQRES 26 A 337 ARG ARG ASN ASN ARG ILE GLY PHE ALA LEU ALA ARG SEQRES 1 B 337 GLY ASN THR THR SER SER VAL ILE LEU THR ASN TYR MET SEQRES 2 B 337 ASP THR GLN TYR TYR GLY GLU ILE GLY ILE GLY THR PRO SEQRES 3 B 337 PRO GLN THR PHE LYS VAL VAL PHE ASP THR GLY SER SER SEQRES 4 B 337 ASN VAL TRP VAL PRO SER SER LYS CYS SER ARG LEU TYR SEQRES 5 B 337 THR ALA CYS VAL TYR HIS LYS LEU PHE ASP ALA SER ASP SEQRES 6 B 337 SER SER SER TYR LYS HIS ASN GLY THR GLU LEU THR LEU SEQRES 7 B 337 ARG TYR SER THR GLY THR VAL SER GLY PHE LEU SER GLN SEQRES 8 B 337 ASP ILE ILE THR VAL GLY GLY ILE THR VAL THR GLN MET SEQRES 9 B 337 PHE GLY GLU VAL THR GLU MET PRO ALA LEU PRO PHE MET SEQRES 10 B 337 LEU ALA GLU PHE ASP GLY VAL VAL GLY MET GLY PHE ILE SEQRES 11 B 337 GLU GLN ALA ILE GLY ARG VAL THR PRO ILE PHE ASP ASN SEQRES 12 B 337 ILE ILE SER GLN GLY VAL LEU LYS GLU ASP VAL PHE SER SEQRES 13 B 337 PHE TYR TYR ASN ARG ASP SER GLU ASN SER GLN SER LEU SEQRES 14 B 337 GLY GLY GLN ILE VAL LEU GLY GLY SER ASP PRO GLN HIS SEQRES 15 B 337 TYR GLU GLY ASN PHE HIS TYR ILE ASN LEU ILE LYS THR SEQRES 16 B 337 GLY VAL TRP GLN ILE GLN MET LYS GLY VAL SER VAL GLY SEQRES 17 B 337 SER SER THR LEU LEU CYS GLU ASP GLY CYS LEU ALA LEU SEQRES 18 B 337 VAL ASP THR GLY ALA SER TYR ILE SER GLY SER THR SER SEQRES 19 B 337 SER ILE GLU LYS LEU MET GLU ALA LEU GLY ALA LYS LYS SEQRES 20 B 337 ARG LEU PHE ASP TYR VAL VAL LYS CYS ASN GLU GLY PRO SEQRES 21 B 337 THR LEU PRO ASP ILE SER PHE HIS LEU GLY GLY LYS GLU SEQRES 22 B 337 TYR THR LEU THR SER ALA ASP TYR VAL PHE GLN GLU SER SEQRES 23 B 337 TYR SER SER LYS LYS LEU CYS THR LEU ALA ILE HIS ALA SEQRES 24 B 337 MET ASP ILE PRO PRO PRO THR GLY PRO THR TRP ALA LEU SEQRES 25 B 337 GLY ALA THR PHE ILE ARG LYS PHE TYR THR GLU PHE ASP SEQRES 26 B 337 ARG ARG ASN ASN ARG ILE GLY PHE ALA LEU ALA ARG HET NAG A 401 14 HET 7EJ A 402 38 HET DMS A 403 4 HET DMS A 404 4 HET DMS A 405 4 HET 7EJ B 401 38 HET PEG B 402 7 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM 7EJ 1-(4-METHOXYBUTYL)-N-(2-METHYLPROPYL)-N-[(3S,5R)-5- HETNAM 2 7EJ (MORPHOLINE-4-CARBONYL)PIPERIDIN-3-YL]-5-PHENYL-1H- HETNAM 3 7EJ PYRROLE-2-CARBOXAMIDE HETNAM DMS DIMETHYL SULFOXIDE HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG C8 H15 N O6 FORMUL 4 7EJ 2(C30 H44 N4 O4) FORMUL 5 DMS 3(C2 H6 O S) FORMUL 9 PEG C4 H10 O3 FORMUL 10 HOH *41(H2 O) HELIX 1 AA1 THR A 56 HIS A 61 1 6 HELIX 2 AA2 ASP A 65 SER A 69 5 5 HELIX 3 AA3 PRO A 115 MET A 120 1 6 HELIX 4 AA4 PHE A 132 VAL A 140 5 9 HELIX 5 AA5 PRO A 142 GLN A 150 1 9 HELIX 6 AA6 ASP A 182 GLN A 184 5 3 HELIX 7 AA7 SER A 235 GLY A 247 1 13 HELIX 8 AA8 GLU A 261 LEU A 265 5 5 HELIX 9 AA9 THR A 280 VAL A 285 1 6 HELIX 10 AB1 GLY A 316 LYS A 322 1 7 HELIX 11 AB2 TYR B 55 TYR B 60 1 6 HELIX 12 AB3 ASP B 65 SER B 69 5 5 HELIX 13 AB4 PRO B 115 MET B 120 1 6 HELIX 14 AB5 PHE B 132 VAL B 140 5 9 HELIX 15 AB6 PRO B 142 GLN B 150 1 9 HELIX 16 AB7 ASP B 182 GLN B 184 5 3 HELIX 17 AB8 SER B 235 GLY B 247 1 13 HELIX 18 AB9 ASN B 260 LEU B 265 5 6 HELIX 19 AC1 THR B 280 TYR B 284 1 5 HELIX 20 AC2 GLY B 316 LYS B 322 1 7 SHEET 1 AA1 9 LYS A 73 TYR A 83 0 SHEET 2 AA1 9 GLY A 86 VAL A 99 -1 O GLN A 94 N LYS A 73 SHEET 3 AA1 9 GLN A 19 ILE A 26 -1 N GLY A 25 O THR A 98 SHEET 4 AA1 9 SER A 8 TYR A 15 -1 N THR A 13 O TYR A 21 SHEET 5 AA1 9 GLY A 174 LEU A 178 -1 O LEU A 178 N SER A 8 SHEET 6 AA1 9 VAL A 157 TYR A 162 -1 N TYR A 161 O GLN A 175 SHEET 7 AA1 9 PHE A 323 ASP A 328 -1 O PHE A 327 N PHE A 158 SHEET 8 AA1 9 ARG A 333 ALA A 339 -1 O GLY A 335 N GLU A 326 SHEET 9 AA1 9 TYR A 186 ASN A 194 -1 N HIS A 191 O PHE A 336 SHEET 1 AA213 LYS A 73 TYR A 83 0 SHEET 2 AA213 GLY A 86 VAL A 99 -1 O GLN A 94 N LYS A 73 SHEET 3 AA213 ILE A 102 GLU A 113 -1 O VAL A 104 N ILE A 97 SHEET 4 AA213 VAL A 44 PRO A 47 1 N VAL A 44 O GLY A 109 SHEET 5 AA213 GLY A 126 GLY A 129 -1 O VAL A 127 N TRP A 45 SHEET 6 AA213 GLN A 31 ASP A 38 1 N VAL A 36 O VAL A 128 SHEET 7 AA213 GLN A 19 ILE A 26 -1 N GLY A 22 O VAL A 35 SHEET 8 AA213 SER A 8 TYR A 15 -1 N THR A 13 O TYR A 21 SHEET 9 AA213 GLY A 174 LEU A 178 -1 O LEU A 178 N SER A 8 SHEET 10 AA213 VAL A 157 TYR A 162 -1 N TYR A 161 O GLN A 175 SHEET 11 AA213 PHE A 323 ASP A 328 -1 O PHE A 327 N PHE A 158 SHEET 12 AA213 ARG A 333 ALA A 339 -1 O GLY A 335 N GLU A 326 SHEET 13 AA213 TYR A 186 ASN A 194 -1 N HIS A 191 O PHE A 336 SHEET 1 AA3 7 LYS A 275 LEU A 279 0 SHEET 2 AA3 7 ILE A 268 LEU A 272 -1 N ILE A 268 O LEU A 279 SHEET 3 AA3 7 GLN A 202 VAL A 210 -1 N GLY A 207 O HIS A 271 SHEET 4 AA3 7 CYS A 221 VAL A 225 -1 O CYS A 221 N MET A 205 SHEET 5 AA3 7 TRP A 313 LEU A 315 1 O TRP A 313 N LEU A 224 SHEET 6 AA3 7 ILE A 232 GLY A 234 -1 N SER A 233 O ALA A 314 SHEET 7 AA3 7 ILE A 300 ALA A 302 1 O HIS A 301 N ILE A 232 SHEET 1 AA4 3 LYS A 249 LYS A 250 0 SHEET 2 AA4 3 TYR A 255 LYS A 258 -1 O VAL A 256 N LYS A 249 SHEET 3 AA4 3 LEU A 295 THR A 297 -1 O CYS A 296 N VAL A 257 SHEET 1 AA5 9 LYS B 73 ARG B 82 0 SHEET 2 AA5 9 THR B 87 VAL B 99 -1 O VAL B 88 N LEU B 81 SHEET 3 AA5 9 GLN B 19 ILE B 26 -1 N GLY B 25 O THR B 98 SHEET 4 AA5 9 SER B 8 TYR B 15 -1 N THR B 13 O TYR B 21 SHEET 5 AA5 9 GLY B 174 LEU B 178 -1 O LEU B 178 N SER B 8 SHEET 6 AA5 9 VAL B 157 TYR B 162 -1 N TYR B 161 O GLN B 175 SHEET 7 AA5 9 PHE B 323 ASP B 328 -1 O PHE B 327 N PHE B 158 SHEET 8 AA5 9 ARG B 333 ALA B 339 -1 O GLY B 335 N GLU B 326 SHEET 9 AA5 9 TYR B 186 ASN B 194 -1 N GLU B 187 O LEU B 338 SHEET 1 AA613 LYS B 73 ARG B 82 0 SHEET 2 AA613 THR B 87 VAL B 99 -1 O VAL B 88 N LEU B 81 SHEET 3 AA613 ILE B 102 GLU B 113 -1 O GLU B 110 N PHE B 91 SHEET 4 AA613 VAL B 44 PRO B 47 1 N VAL B 44 O GLY B 109 SHEET 5 AA613 GLY B 126 GLY B 129 -1 O VAL B 127 N TRP B 45 SHEET 6 AA613 GLN B 31 ASP B 38 1 N ASP B 38 O VAL B 128 SHEET 7 AA613 GLN B 19 ILE B 26 -1 N GLY B 22 O VAL B 35 SHEET 8 AA613 SER B 8 TYR B 15 -1 N THR B 13 O TYR B 21 SHEET 9 AA613 GLY B 174 LEU B 178 -1 O LEU B 178 N SER B 8 SHEET 10 AA613 VAL B 157 TYR B 162 -1 N TYR B 161 O GLN B 175 SHEET 11 AA613 PHE B 323 ASP B 328 -1 O PHE B 327 N PHE B 158 SHEET 12 AA613 ARG B 333 ALA B 339 -1 O GLY B 335 N GLU B 326 SHEET 13 AA613 TYR B 186 ASN B 194 -1 N GLU B 187 O LEU B 338 SHEET 1 AA7 4 SER B 213 LEU B 216 0 SHEET 2 AA7 4 GLN B 202 VAL B 210 -1 N VAL B 208 O LEU B 216 SHEET 3 AA7 4 ILE B 268 LEU B 272 -1 O HIS B 271 N GLY B 207 SHEET 4 AA7 4 LYS B 275 LEU B 279 -1 O LEU B 279 N ILE B 268 SHEET 1 AA8 6 SER B 213 LEU B 216 0 SHEET 2 AA8 6 GLN B 202 VAL B 210 -1 N VAL B 208 O LEU B 216 SHEET 3 AA8 6 CYS B 221 VAL B 225 -1 O ALA B 223 N ILE B 203 SHEET 4 AA8 6 TRP B 313 LEU B 315 1 O LEU B 315 N LEU B 224 SHEET 5 AA8 6 ILE B 232 GLY B 234 -1 N SER B 233 O ALA B 314 SHEET 6 AA8 6 ILE B 300 ALA B 302 1 O HIS B 301 N ILE B 232 SHEET 1 AA9 3 VAL B 256 LYS B 258 0 SHEET 2 AA9 3 LEU B 295 LEU B 298 -1 O CYS B 296 N VAL B 257 SHEET 3 AA9 3 VAL B 285 PHE B 286 -1 N PHE B 286 O THR B 297 SSBOND 1 CYS A 51 CYS A 58 1555 1555 2.03 SSBOND 2 CYS A 217 CYS A 221 1555 1555 2.03 SSBOND 3 CYS A 259 CYS A 296 1555 1555 2.04 SSBOND 4 CYS B 51 CYS B 58 1555 1555 2.02 SSBOND 5 CYS B 217 CYS B 221 1555 1555 2.03 SSBOND 6 CYS B 259 CYS B 296 1555 1555 2.04 LINK ND2 ASN A 75 C1 NAG A 401 1555 1555 1.45 CISPEP 1 THR A 28 PRO A 29 0 -5.35 CISPEP 2 LEU A 117 PRO A 118 0 7.41 CISPEP 3 PRO A 307 PRO A 308 0 2.70 CISPEP 4 GLY A 310 PRO A 311 0 -1.26 CISPEP 5 THR B 28 PRO B 29 0 -1.82 CISPEP 6 LEU B 117 PRO B 118 0 0.40 CISPEP 7 PRO B 307 PRO B 308 0 3.66 CISPEP 8 GLY B 310 PRO B 311 0 -1.54 CRYST1 139.717 139.717 139.717 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007157 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007157 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007157 0.00000