HEADER HYDROLASE/HYDROLASE INHIBITOR 14-OCT-16 5TNO
TITLE DISCOVERY OF NOVEL AMINOBENZISOXAZOLE DERIVATIVES AS ORALLY AVAILABLE
TITLE 2 FACTOR IXA INHIBITORS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: COAGULATION FACTOR IX;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: UNP RESIDUES 227-461;
COMPND 5 SYNONYM: CHRISTMAS FACTOR,PLASMA THROMBOPLASTIN COMPONENT,PTC;
COMPND 6 EC: 3.4.21.22;
COMPND 7 ENGINEERED: YES;
COMPND 8 MOL_ID: 2;
COMPND 9 MOLECULE: COAGULATION FACTOR IX;
COMPND 10 CHAIN: B;
COMPND 11 FRAGMENT: UNP RESIDUES 131-191;
COMPND 12 SYNONYM: CHRISTMAS FACTOR,PLASMA THROMBOPLASTIN COMPONENT,PTC;
COMPND 13 EC: 3.4.21.22;
COMPND 14 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: F9;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 MOL_ID: 2;
SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 10 ORGANISM_COMMON: HUMAN;
SOURCE 11 ORGANISM_TAXID: 9606;
SOURCE 12 GENE: F9;
SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS SERINE PROTEINASE, BLOOD COAGULATION, COAGULATION FACTOR, HYDROLASE-
KEYWDS 2 2, HYDROLASE INHIBITOR COMPLEX, HYDROLASE-HYDROLASE INHIBITOR
KEYWDS 3 COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR I.SAKURADA,T.ENDO,K.HIKITA,T.HIRABAYASHI,Y.HOSAKA,Y.KATO,Y.MAEDA,
AUTHOR 2 S.MATSUMOTO,T.MIZUNO,H.NAGASUE,T.NISHIMURA,S.SHIMADA,M.SHINOZAKI,
AUTHOR 3 K.TAGUCHI,K.TAKEUCHI,T.YOKOYAMA,A.HRUZA,P.REICHERT,T.ZHANG,H.B.WOOD,
AUTHOR 4 K.NAKAO,S.FURUSAKO
REVDAT 5 06-NOV-24 5TNO 1 REMARK
REVDAT 4 04-OCT-23 5TNO 1 REMARK
REVDAT 3 22-NOV-17 5TNO 1 REMARK
REVDAT 2 24-MAY-17 5TNO 1 JRNL
REVDAT 1 26-APR-17 5TNO 0
JRNL AUTH I.SAKURADA,T.ENDO,K.HIKITA,T.HIRABAYASHI,Y.HOSAKA,Y.KATO,
JRNL AUTH 2 Y.MAEDA,S.MATSUMOTO,T.MIZUNO,H.NAGASUE,T.NISHIMURA,
JRNL AUTH 3 S.SHIMADA,M.SHINOZAKI,K.TAGUCHI,K.TAKEUCHI,T.YOKOYAMA,
JRNL AUTH 4 A.HRUZA,P.REICHERT,T.ZHANG,H.B.WOOD,K.NAKAO,S.FURUSAKO
JRNL TITL DISCOVERY OF NOVEL AMINOBENZISOXAZOLE DERIVATIVES AS ORALLY
JRNL TITL 2 AVAILABLE FACTOR IXA INHIBITORS.
JRNL REF BIOORG. MED. CHEM. LETT. V. 27 2622 2017
JRNL REFN ESSN 1464-3405
JRNL PMID 28408226
JRNL DOI 10.1016/J.BMCL.2017.03.002
REMARK 2
REMARK 2 RESOLUTION. 1.54 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.7
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.55
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 3 NUMBER OF REFLECTIONS : 50779
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.145
REMARK 3 R VALUE (WORKING SET) : 0.145
REMARK 3 FREE R VALUE : 0.158
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020
REMARK 3 FREE R VALUE TEST SET COUNT : 2547
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.58
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3745
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1800
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3538
REMARK 3 BIN R VALUE (WORKING SET) : 0.1780
REMARK 3 BIN FREE R VALUE : 0.2060
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.53
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 207
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2224
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 57
REMARK 3 SOLVENT ATOMS : 254
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 25.14
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.90
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -1.28920
REMARK 3 B22 (A**2) : -1.28920
REMARK 3 B33 (A**2) : 2.57840
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.150
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.057
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.055
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.063
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.055
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 4623 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 8352 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1008 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 57 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 689 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 4623 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : 2 ; 5.000 ; SEMIHARMONIC
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 300 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 5238 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.13
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.47
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 13.53
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|* }
REMARK 3 ORIGIN FOR THE GROUP (A): -3.4411 -33.2636 -3.1652
REMARK 3 T TENSOR
REMARK 3 T11: -0.0129 T22: -0.1109
REMARK 3 T33: -0.0929 T12: 0.0012
REMARK 3 T13: 0.0115 T23: 0.0084
REMARK 3 L TENSOR
REMARK 3 L11: 1.2974 L22: 1.3199
REMARK 3 L33: 2.1066 L12: 0.3105
REMARK 3 L13: 0.1257 L23: -0.1136
REMARK 3 S TENSOR
REMARK 3 S11: -0.0368 S12: 0.0669 S13: -0.1258
REMARK 3 S21: -0.1026 S22: 0.0585 S23: 0.0430
REMARK 3 S31: 0.2802 S32: -0.0161 S33: -0.0218
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { B|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 5.8623 -28.5072 19.9708
REMARK 3 T TENSOR
REMARK 3 T11: -0.0224 T22: 0.0225
REMARK 3 T33: -0.0476 T12: 0.0020
REMARK 3 T13: -0.0218 T23: 0.0148
REMARK 3 L TENSOR
REMARK 3 L11: 0.6993 L22: 0.8938
REMARK 3 L33: 1.9977 L12: -0.4054
REMARK 3 L13: 0.5484 L23: -0.2208
REMARK 3 S TENSOR
REMARK 3 S11: -0.0423 S12: -0.1385 S13: 0.0629
REMARK 3 S21: 0.0376 S22: -0.0541 S23: -0.0211
REMARK 3 S31: -0.1463 S32: 0.2294 S33: 0.0965
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5TNO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-OCT-16.
REMARK 100 THE DEPOSITION ID IS D_1000224487.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 14-JUL-12
REMARK 200 TEMPERATURE (KELVIN) : 95
REMARK 200 PH : 9.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 17-ID
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS (VERSION DECEMBER 29)
REMARK 200 DATA SCALING SOFTWARE : AUTOPROC, SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51117
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.537
REMARK 200 RESOLUTION RANGE LOW (A) : 63.360
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 5.100
REMARK 200 R MERGE (I) : 0.03000
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.7000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 5.20
REMARK 200 R MERGE FOR SHELL (I) : 0.52400
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: MOLREP
REMARK 200 STARTING MODEL: 1RFN
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 55.56
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM CHES, PH 9.0, 1.3 M TRI-SODIUM
REMARK 280 CITRATE AND 3 MM COMPOUND (CROSS SEEDED WITH CRYSTALS GROWN FROM
REMARK 280 REMARK 280 50 MM TRIS, PH 7.2, 1.45 M AMMONIUM SULFATE, 2.0 M
REMARK 280 SODIUM REMARK 280 CHLORIDE AND 3 MM COMPOUND), VAPOR DIFFUSION,
REMARK 280 HANGING DROP, TEMPERATURE 295K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z
REMARK 290 3555 -X+Y,-X,Z
REMARK 290 4555 X+2/3,Y+1/3,Z+1/3
REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3
REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3
REMARK 290 7555 X+1/3,Y+2/3,Z+2/3
REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3
REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.41750
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.53121
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.41733
REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 49.41750
REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 28.53121
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.41733
REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 49.41750
REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 28.53121
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.41733
REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.06241
REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 62.83467
REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 57.06241
REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 62.83467
REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 57.06241
REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 62.83467
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 2100 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 13970 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLU A 59A
REMARK 465 THR A 59B
REMARK 465 GLY A 59C
REMARK 465 MET B 84
REMARK 465 ASP B 85
REMARK 465 THR B 140
REMARK 465 SER B 141
REMARK 465 LYS B 142
REMARK 465 LEU B 143
REMARK 465 THR B 144
REMARK 465 ARG B 145
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 HIS A 71 -64.36 -139.69
REMARK 500 GLU A 77 -158.45 -93.34
REMARK 500 GLU A 77 -156.41 -93.34
REMARK 500 SER A 214 -71.79 -115.52
REMARK 500 GLN B 97 -79.91 -114.18
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A 584 DISTANCE = 5.97 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA A 302 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 70 OE1
REMARK 620 2 ASN A 72 O 89.4
REMARK 620 3 GLU A 75 O 168.8 86.0
REMARK 620 4 GLU A 77 OE1 87.6 88.9 102.5
REMARK 620 5 GLU A 80 OE2 96.6 174.0 88.0 91.5
REMARK 620 6 HOH A 403 O 87.1 104.9 84.2 165.1 75.4
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NHE A 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NHE A 304
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5TNT RELATED DB: PDB
DBREF 5TNO A 16 245 UNP P00740 FA9_HUMAN 227 461
DBREF 5TNO B 85 145 UNP P00740 FA9_HUMAN 131 191
SEQADV 5TNO ALA A 150 UNP P00740 ARG 364 ENGINEERED MUTATION
SEQADV 5TNO MET B 84 UNP P00740 INITIATING METHIONINE
SEQRES 1 A 235 VAL VAL GLY GLY GLU ASP ALA LYS PRO GLY GLN PHE PRO
SEQRES 2 A 235 TRP GLN VAL VAL LEU ASN GLY LYS VAL ASP ALA PHE CYS
SEQRES 3 A 235 GLY GLY SER ILE VAL ASN GLU LYS TRP ILE VAL THR ALA
SEQRES 4 A 235 ALA HIS CYS VAL GLU THR GLY VAL LYS ILE THR VAL VAL
SEQRES 5 A 235 ALA GLY GLU HIS ASN ILE GLU GLU THR GLU HIS THR GLU
SEQRES 6 A 235 GLN LYS ARG ASN VAL ILE ARG ILE ILE PRO HIS HIS ASN
SEQRES 7 A 235 TYR ASN ALA ALA ILE ASN LYS TYR ASN HIS ASP ILE ALA
SEQRES 8 A 235 LEU LEU GLU LEU ASP GLU PRO LEU VAL LEU ASN SER TYR
SEQRES 9 A 235 VAL THR PRO ILE CYS ILE ALA ASP LYS GLU TYR THR ASN
SEQRES 10 A 235 ILE PHE LEU LYS PHE GLY SER GLY TYR VAL SER GLY TRP
SEQRES 11 A 235 GLY ARG VAL PHE HIS LYS GLY ALA SER ALA LEU VAL LEU
SEQRES 12 A 235 GLN TYR LEU ARG VAL PRO LEU VAL ASP ARG ALA THR CYS
SEQRES 13 A 235 LEU ARG SER THR LYS PHE THR ILE TYR ASN ASN MET PHE
SEQRES 14 A 235 CYS ALA GLY PHE HIS GLU GLY GLY ARG ASP SER CYS GLN
SEQRES 15 A 235 GLY ASP SER GLY GLY PRO HIS VAL THR GLU VAL GLU GLY
SEQRES 16 A 235 THR SER PHE LEU THR GLY ILE ILE SER TRP GLY GLU GLU
SEQRES 17 A 235 CYS ALA MET LYS GLY LYS TYR GLY ILE TYR THR LYS VAL
SEQRES 18 A 235 SER ARG TYR VAL ASN TRP ILE LYS GLU LYS THR LYS LEU
SEQRES 19 A 235 THR
SEQRES 1 B 62 MET ASP VAL THR CYS ASN ILE LYS ASN GLY ARG CYS GLU
SEQRES 2 B 62 GLN PHE CYS LYS ASN SER ALA ASP ASN LYS VAL VAL CYS
SEQRES 3 B 62 SER CYS THR GLU GLY TYR ARG LEU ALA GLU ASN GLN LYS
SEQRES 4 B 62 SER CYS GLU PRO ALA VAL PRO PHE PRO CYS GLY ARG VAL
SEQRES 5 B 62 SER VAL SER GLN THR SER LYS LEU THR ARG
HET UNL A 301 48
HET NA A 302 1
HET NHE A 303 30
HET NHE A 304 30
HETNAM UNL UNKNOWN LIGAND
HETNAM NA SODIUM ION
HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
HETSYN NHE N-CYCLOHEXYLTAURINE; CHES
FORMUL 4 NA NA 1+
FORMUL 5 NHE 2(C8 H17 N O3 S)
FORMUL 7 HOH *254(H2 O)
HELIX 1 AA1 ALA A 55 VAL A 59 5 5
HELIX 2 AA2 ASP A 125 PHE A 133 1 11
HELIX 3 AA3 ASP A 164 SER A 171 1 8
HELIX 4 AA4 TYR A 234 LYS A 243 1 10
HELIX 5 AA5 ILE B 90 CYS B 95 5 6
SHEET 1 AA1 8 GLU A 20 ASP A 21 0
SHEET 2 AA1 8 GLN A 156 VAL A 163 -1 O TYR A 157 N GLU A 20
SHEET 3 AA1 8 MET A 180 ALA A 183 -1 O CYS A 182 N VAL A 163
SHEET 4 AA1 8 GLY A 226 LYS A 230 -1 O TYR A 228 N PHE A 181
SHEET 5 AA1 8 THR A 206 TRP A 215 -1 N TRP A 215 O ILE A 227
SHEET 6 AA1 8 PRO A 198 VAL A 203 -1 N VAL A 203 O THR A 206
SHEET 7 AA1 8 SER A 135 GLY A 140 -1 N TYR A 137 O VAL A 200
SHEET 8 AA1 8 GLN A 156 VAL A 163 -1 O VAL A 160 N GLY A 136
SHEET 1 AA2 7 GLN A 30 ASN A 34 0
SHEET 2 AA2 7 CYS A 42 ASN A 48 -1 O CYS A 42 N LEU A 33
SHEET 3 AA2 7 TRP A 51 THR A 54 -1 O VAL A 53 N SER A 45
SHEET 4 AA2 7 ALA A 104 LEU A 108 -1 O ALA A 104 N THR A 54
SHEET 5 AA2 7 GLN A 81 PRO A 90 -1 N ILE A 89 O LEU A 105
SHEET 6 AA2 7 THR A 65 ALA A 68 -1 N VAL A 66 O ARG A 83
SHEET 7 AA2 7 GLN A 30 ASN A 34 -1 N ASN A 34 O THR A 65
SHEET 1 AA3 2 PHE B 98 SER B 102 0
SHEET 2 AA3 2 LYS B 106 SER B 110 -1 O LYS B 106 N SER B 102
SHEET 1 AA4 2 TYR B 115 LEU B 117 0
SHEET 2 AA4 2 CYS B 124 PRO B 126 -1 O GLU B 125 N ARG B 116
SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.06
SSBOND 2 CYS A 122 CYS B 132 1555 1555 2.07
SSBOND 3 CYS A 168 CYS A 182 1555 1555 2.00
SSBOND 4 CYS A 191 CYS A 220 1555 1555 2.03
SSBOND 5 CYS B 88 CYS B 99 1555 1555 2.05
SSBOND 6 CYS B 95 CYS B 109 1555 1555 2.03
SSBOND 7 CYS B 111 CYS B 124 1555 1555 2.11
LINK OE1 GLU A 70 NA NA A 302 1555 1555 2.24
LINK O ASN A 72 NA NA A 302 1555 1555 2.29
LINK O GLU A 75 NA NA A 302 1555 1555 2.23
LINK OE1 GLU A 77 NA NA A 302 1555 1555 2.50
LINK OE2 GLU A 80 NA NA A 302 1555 1555 2.46
LINK NA NA A 302 O HOH A 403 1555 1555 2.59
SITE 1 AC1 6 GLU A 70 ASN A 72 GLU A 75 GLU A 77
SITE 2 AC1 6 GLU A 80 HOH A 403
SITE 1 AC2 10 ASP A 21 LYS A 132 PHE A 145 ALA A 152
SITE 2 AC2 10 LEU A 153 VAL A 154 HOH A 497 HOH A 545
SITE 3 AC2 10 HOH A 552 HOH B 250
SITE 1 AC3 12 VAL A 38 ASP A 39 ALA A 40 PHE A 41
SITE 2 AC3 12 ARG A 143 SER A 151 ASP A 164 ARG A 165
SITE 3 AC3 12 ALA A 166 GLN A 192 HOH A 443 HOH A 549
CRYST1 98.835 98.835 94.252 90.00 90.00 120.00 H 3 9
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010118 0.005842 0.000000 0.00000
SCALE2 0.000000 0.011683 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010610 0.00000