HEADER HYDROLASE/HYDROLASE INHIBITOR 14-OCT-16 5TNT TITLE DISCOVERY OF NOVEL AMINOBENZISOXAZOLE DERIVATIVES AS ORALLY AVAILABLE TITLE 2 FACTOR IXA INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAGULATION FACTOR IX; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 227-461; COMPND 5 SYNONYM: CHRISTMAS FACTOR,PLASMA THROMBOPLASTIN COMPONENT,PTC; COMPND 6 EC: 3.4.21.22; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: COAGULATION FACTOR IX; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: UNP RESIDUES 131-191; COMPND 13 SYNONYM: CHRISTMAS FACTOR,PLASMA THROMBOPLASTIN COMPONENT,PTC; COMPND 14 EC: 3.4.21.22; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: F9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: F9; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SERINE PROTEINASE, BLOOD COAGULATION, COAGULATION FACTOR, HYDROLASE- KEYWDS 2 2, HYDROLASE INHIBITOR COMPLEX, HYDROLASE-HYDROLASE INHIBITOR KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR I.SAKURADA,T.ENDO,K.HIKITA,T.HIRABAYASHI,Y.HOSAKA,Y.KATO,Y.MAEDA, AUTHOR 2 S.MATSUMOTO,T.MIZUNO,A.NAGASUE,T.NISHIMURA,S.SHIMADA,M.SHINOZAKI, AUTHOR 3 K.TAGUCHI,K.TAKEUCHI,T.YOKOYAMA,A.HRUZA,P.REICHERT,T.ZHANG,H.B.WOOD, AUTHOR 4 K.NAKAO,S.FURUSAKO REVDAT 5 30-OCT-24 5TNT 1 REMARK REVDAT 4 04-OCT-23 5TNT 1 REMARK REVDAT 3 22-NOV-17 5TNT 1 REMARK REVDAT 2 24-MAY-17 5TNT 1 JRNL REVDAT 1 26-APR-17 5TNT 0 JRNL AUTH I.SAKURADA,T.ENDO,K.HIKITA,T.HIRABAYASHI,Y.HOSAKA,Y.KATO, JRNL AUTH 2 Y.MAEDA,S.MATSUMOTO,T.MIZUNO,H.NAGASUE,T.NISHIMURA, JRNL AUTH 3 S.SHIMADA,M.SHINOZAKI,K.TAGUCHI,K.TAKEUCHI,T.YOKOYAMA, JRNL AUTH 4 A.HRUZA,P.REICHERT,T.ZHANG,H.B.WOOD,K.NAKAO,S.FURUSAKO JRNL TITL DISCOVERY OF NOVEL AMINOBENZISOXAZOLE DERIVATIVES AS ORALLY JRNL TITL 2 AVAILABLE FACTOR IXA INHIBITORS. JRNL REF BIOORG. MED. CHEM. LETT. V. 27 2622 2017 JRNL REFN ESSN 1464-3405 JRNL PMID 28408226 JRNL DOI 10.1016/J.BMCL.2017.03.002 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 68156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.161 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 3404 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.64 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 5021 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1750 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4766 REMARK 3 BIN R VALUE (WORKING SET) : 0.1750 REMARK 3 BIN FREE R VALUE : 0.1760 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.08 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 255 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2252 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 344 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06110 REMARK 3 B22 (A**2) : 0.06110 REMARK 3 B33 (A**2) : -0.12210 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.140 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.046 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.046 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.048 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.045 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4739 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8574 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1047 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 59 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 758 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4739 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 311 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5396 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.13 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.77 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 13.38 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -3.2351 -33.4432 -3.3386 REMARK 3 T TENSOR REMARK 3 T11: 0.0209 T22: -0.0719 REMARK 3 T33: -0.0896 T12: 0.0006 REMARK 3 T13: 0.0068 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.9428 L22: 1.1089 REMARK 3 L33: 1.2531 L12: 0.3500 REMARK 3 L13: -0.1247 L23: -0.3678 REMARK 3 S TENSOR REMARK 3 S11: -0.0663 S12: 0.0576 S13: -0.0811 REMARK 3 S21: -0.1641 S22: 0.0514 S23: 0.0309 REMARK 3 S31: 0.2289 S32: -0.0222 S33: 0.0149 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 5.8108 -28.6200 20.3288 REMARK 3 T TENSOR REMARK 3 T11: -0.0096 T22: 0.0206 REMARK 3 T33: -0.0573 T12: -0.0067 REMARK 3 T13: -0.0181 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 0.3909 L22: 0.6448 REMARK 3 L33: 1.5321 L12: -0.4612 REMARK 3 L13: 0.5357 L23: -0.1140 REMARK 3 S TENSOR REMARK 3 S11: -0.0428 S12: -0.0790 S13: 0.0503 REMARK 3 S21: 0.0729 S22: -0.0558 S23: -0.0394 REMARK 3 S31: -0.1524 S32: 0.1625 S33: 0.0986 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TNT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1000224489. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979490 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS (VERSION SEPTEMBER 2 REMARK 200 DATA SCALING SOFTWARE : AUTOPROC, SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68182 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 28.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : 0.09200 REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.44600 REMARK 200 R SYM FOR SHELL (I) : 0.44600 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1RFN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM CHES, PH 9.0, 1.3 M TRI-SODIUM REMARK 280 CITRATE AND 3 MM COMPOUND (CROSS SEEDED WITH CRYSTALS GROWN FROM REMARK 280 REMARK 280 50 MM TRIS, PH 7.2, 1.45 M AMMONIUM SULFATE, 2.0 M REMARK 280 SODIUM CHLORIDE AND 3 MM COMPOUND), VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.54200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.60309 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.56000 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 49.54200 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 28.60309 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.56000 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 49.54200 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 28.60309 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.56000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.20617 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 63.12000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 57.20617 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 63.12000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 57.20617 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 63.12000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 84 REMARK 465 THR B 140 REMARK 465 SER B 141 REMARK 465 LYS B 142 REMARK 465 LEU B 143 REMARK 465 THR B 144 REMARK 465 ARG B 145 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 71 -66.57 -140.54 REMARK 500 GLU A 77 -155.12 -113.46 REMARK 500 GLU A 77 -153.11 -113.46 REMARK 500 SER A 214 -71.59 -117.69 REMARK 500 GLN B 97 -83.98 -113.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 640 DISTANCE = 6.54 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 70 OE1 REMARK 620 2 ASN A 72 O 88.4 REMARK 620 3 GLU A 75 O 165.8 85.7 REMARK 620 4 GLU A 80 OE2 96.9 169.9 87.2 REMARK 620 5 HOH A 402 O 86.1 103.2 82.8 68.8 REMARK 620 6 HOH A 441 O 87.1 87.8 105.5 101.0 166.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7GQ A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NHE A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TNO RELATED DB: PDB DBREF 5TNT A 16 245 UNP P00740 FA9_HUMAN 227 461 DBREF 5TNT B 85 145 UNP P00740 FA9_HUMAN 131 191 SEQADV 5TNT ALA A 150 UNP P00740 ARG 364 ENGINEERED MUTATION SEQADV 5TNT MET B 84 UNP P00740 INITIATING METHIONINE SEQRES 1 A 235 VAL VAL GLY GLY GLU ASP ALA LYS PRO GLY GLN PHE PRO SEQRES 2 A 235 TRP GLN VAL VAL LEU ASN GLY LYS VAL ASP ALA PHE CYS SEQRES 3 A 235 GLY GLY SER ILE VAL ASN GLU LYS TRP ILE VAL THR ALA SEQRES 4 A 235 ALA HIS CYS VAL GLU THR GLY VAL LYS ILE THR VAL VAL SEQRES 5 A 235 ALA GLY GLU HIS ASN ILE GLU GLU THR GLU HIS THR GLU SEQRES 6 A 235 GLN LYS ARG ASN VAL ILE ARG ILE ILE PRO HIS HIS ASN SEQRES 7 A 235 TYR ASN ALA ALA ILE ASN LYS TYR ASN HIS ASP ILE ALA SEQRES 8 A 235 LEU LEU GLU LEU ASP GLU PRO LEU VAL LEU ASN SER TYR SEQRES 9 A 235 VAL THR PRO ILE CYS ILE ALA ASP LYS GLU TYR THR ASN SEQRES 10 A 235 ILE PHE LEU LYS PHE GLY SER GLY TYR VAL SER GLY TRP SEQRES 11 A 235 GLY ARG VAL PHE HIS LYS GLY ALA SER ALA LEU VAL LEU SEQRES 12 A 235 GLN TYR LEU ARG VAL PRO LEU VAL ASP ARG ALA THR CYS SEQRES 13 A 235 LEU ARG SER THR LYS PHE THR ILE TYR ASN ASN MET PHE SEQRES 14 A 235 CYS ALA GLY PHE HIS GLU GLY GLY ARG ASP SER CYS GLN SEQRES 15 A 235 GLY ASP SER GLY GLY PRO HIS VAL THR GLU VAL GLU GLY SEQRES 16 A 235 THR SER PHE LEU THR GLY ILE ILE SER TRP GLY GLU GLU SEQRES 17 A 235 CYS ALA MET LYS GLY LYS TYR GLY ILE TYR THR LYS VAL SEQRES 18 A 235 SER ARG TYR VAL ASN TRP ILE LYS GLU LYS THR LYS LEU SEQRES 19 A 235 THR SEQRES 1 B 62 MET ASP VAL THR CYS ASN ILE LYS ASN GLY ARG CYS GLU SEQRES 2 B 62 GLN PHE CYS LYS ASN SER ALA ASP ASN LYS VAL VAL CYS SEQRES 3 B 62 SER CYS THR GLU GLY TYR ARG LEU ALA GLU ASN GLN LYS SEQRES 4 B 62 SER CYS GLU PRO ALA VAL PRO PHE PRO CYS GLY ARG VAL SEQRES 5 B 62 SER VAL SER GLN THR SER LYS LEU THR ARG HET 7GQ A 301 54 HET NA A 302 1 HET NHE A 303 30 HETNAM 7GQ N-[(1S,4S,7R)-2-(3-AMINO-4-CHLORO[1,2]OXAZOLO[5,4- HETNAM 2 7GQ C]PYRIDIN-7-YL)-2-AZABICYCLO[2.2.1]HEPTAN-7-YL]-2- HETNAM 3 7GQ CHLORO-4-(3-METHYL-1H-1,2,4-TRIAZOL-1-YL)BENZAMIDE HETNAM NA SODIUM ION HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID HETSYN NHE N-CYCLOHEXYLTAURINE; CHES FORMUL 3 7GQ C22 H20 CL2 N8 O2 FORMUL 4 NA NA 1+ FORMUL 5 NHE C8 H17 N O3 S FORMUL 6 HOH *344(H2 O) HELIX 1 AA1 ALA A 55 GLU A 60 5 6 HELIX 2 AA2 ASP A 125 PHE A 133 1 11 HELIX 3 AA3 ASP A 164 THR A 172 1 9 HELIX 4 AA4 TYR A 234 LYS A 243 1 10 HELIX 5 AA5 ILE B 90 CYS B 95 5 6 SHEET 1 AA1 8 GLU A 20 ASP A 21 0 SHEET 2 AA1 8 GLN A 156 VAL A 163 -1 O TYR A 157 N GLU A 20 SHEET 3 AA1 8 MET A 180 ALA A 183 -1 O CYS A 182 N VAL A 163 SHEET 4 AA1 8 GLY A 226 LYS A 230 -1 O TYR A 228 N PHE A 181 SHEET 5 AA1 8 THR A 206 TRP A 215 -1 N TRP A 215 O ILE A 227 SHEET 6 AA1 8 PRO A 198 VAL A 203 -1 N VAL A 203 O THR A 206 SHEET 7 AA1 8 SER A 135 GLY A 140 -1 N TYR A 137 O VAL A 200 SHEET 8 AA1 8 GLN A 156 VAL A 163 -1 O VAL A 160 N GLY A 136 SHEET 1 AA2 7 GLN A 30 ASN A 34 0 SHEET 2 AA2 7 CYS A 42 ASN A 48 -1 O CYS A 42 N LEU A 33 SHEET 3 AA2 7 TRP A 51 THR A 54 -1 O VAL A 53 N SER A 45 SHEET 4 AA2 7 ALA A 104 LEU A 108 -1 O LEU A 106 N ILE A 52 SHEET 5 AA2 7 GLN A 81 PRO A 90 -1 N ILE A 89 O LEU A 105 SHEET 6 AA2 7 THR A 65 ALA A 68 -1 N ALA A 68 O GLN A 81 SHEET 7 AA2 7 GLN A 30 ASN A 34 -1 N ASN A 34 O THR A 65 SHEET 1 AA3 2 PHE B 98 SER B 102 0 SHEET 2 AA3 2 LYS B 106 SER B 110 -1 O VAL B 108 N LYS B 100 SHEET 1 AA4 2 TYR B 115 LEU B 117 0 SHEET 2 AA4 2 CYS B 124 PRO B 126 -1 O GLU B 125 N ARG B 116 SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.04 SSBOND 2 CYS A 122 CYS B 132 1555 1555 2.06 SSBOND 3 CYS A 168 CYS A 182 1555 1555 2.01 SSBOND 4 CYS A 191 CYS A 220 1555 1555 2.03 SSBOND 5 CYS B 88 CYS B 99 1555 1555 2.05 SSBOND 6 CYS B 95 CYS B 109 1555 1555 2.04 SSBOND 7 CYS B 111 CYS B 124 1555 1555 2.11 LINK OE1 GLU A 70 NA NA A 302 1555 1555 2.26 LINK O ASN A 72 NA NA A 302 1555 1555 2.30 LINK O GLU A 75 NA NA A 302 1555 1555 2.22 LINK OE2 GLU A 80 NA NA A 302 1555 1555 2.43 LINK NA NA A 302 O HOH A 402 1555 1555 2.69 LINK NA NA A 302 O HOH A 441 1555 1555 2.42 SITE 1 AC1 14 TYR A 99 PHE A 174 ASP A 189 SER A 190 SITE 2 AC1 14 CYS A 191 GLN A 192 SER A 195 ILE A 213 SITE 3 AC1 14 TRP A 215 GLY A 216 GLU A 217 CYS A 220 SITE 4 AC1 14 HOH A 562 HOH A 570 SITE 1 AC2 6 GLU A 70 ASN A 72 GLU A 75 GLU A 80 SITE 2 AC2 6 HOH A 402 HOH A 441 SITE 1 AC3 11 ASP A 21 LYS A 132 PHE A 145 ALA A 152 SITE 2 AC3 11 LEU A 153 VAL A 154 HOH A 450 HOH A 501 SITE 3 AC3 11 HOH A 573 ASN B 89 HOH B 269 CRYST1 99.084 99.084 94.680 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010092 0.005827 0.000000 0.00000 SCALE2 0.000000 0.011654 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010562 0.00000