HEADER IMMUNE SYSTEM 19-OCT-16 5TP3 TITLE CRYSTAL STRUCTURE OF THE RSV-NEUTRALIZING SINGLE-DOMAIN ANTIBODY F- TITLE 2 VHH-4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: F-VHH-4; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 3 ORGANISM_COMMON: LLAMA; SOURCE 4 ORGANISM_TAXID: 9844; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PAH KEYWDS NANOBODY, RESPIRATORY SYNCYTIAL VIRUS, IG FOLD, FUSION GLYCOPROTEIN, KEYWDS 2 PSEUDOMEROHEDRAL, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.WRAPP,M.S.A.GILMAN,J.S.MCLELLAN REVDAT 7 16-OCT-24 5TP3 1 REMARK REVDAT 6 04-OCT-23 5TP3 1 REMARK REVDAT 5 25-DEC-19 5TP3 1 REMARK REVDAT 4 13-SEP-17 5TP3 1 REMARK REVDAT 3 26-APR-17 5TP3 1 REMARK REVDAT 2 01-MAR-17 5TP3 1 JRNL REVDAT 1 22-FEB-17 5TP3 0 JRNL AUTH I.ROSSEY,M.S.GILMAN,S.C.KABECHE,K.SEDEYN,D.WRAPP,M.KANEKIYO, JRNL AUTH 2 M.CHEN,V.MAS,J.SPITAELS,J.A.MELERO,B.S.GRAHAM,B.SCHEPENS, JRNL AUTH 3 J.S.MCLELLAN,X.SAELENS JRNL TITL POTENT SINGLE-DOMAIN ANTIBODIES THAT ARREST RESPIRATORY JRNL TITL 2 SYNCYTIAL VIRUS FUSION PROTEIN IN ITS PREFUSION STATE. JRNL REF NAT COMMUN V. 8 14158 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28194013 JRNL DOI 10.1038/NCOMMS14158 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 28958 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 17.2607 - 4.0222 0.94 2900 173 0.1379 0.1925 REMARK 3 2 4.0222 - 3.1992 0.96 2823 122 0.1454 0.1804 REMARK 3 3 3.1992 - 2.7967 0.95 2737 155 0.1717 0.2067 REMARK 3 4 2.7967 - 2.5419 0.95 2763 139 0.1905 0.2353 REMARK 3 5 2.5419 - 2.3602 0.94 2707 163 0.1935 0.2379 REMARK 3 6 2.3602 - 2.2213 0.95 2730 136 0.1990 0.2537 REMARK 3 7 2.2213 - 2.1103 0.96 2744 117 0.1947 0.2500 REMARK 3 8 2.1103 - 2.0186 0.95 2710 142 0.2136 0.2574 REMARK 3 9 2.0186 - 1.9410 0.95 2688 144 0.2209 0.2397 REMARK 3 10 1.9410 - 1.8741 0.96 2702 122 0.2489 0.2696 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.4700 REMARK 3 OPERATOR: K,H,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1960 REMARK 3 ANGLE : 0.812 2656 REMARK 3 CHIRALITY : 0.047 274 REMARK 3 PLANARITY : 0.005 340 REMARK 3 DIHEDRAL : 11.000 1138 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 1:33 REMARK 3 ORIGIN FOR THE GROUP (A): 38.9361 13.8646 9.9064 REMARK 3 T TENSOR REMARK 3 T11: 0.1531 T22: 0.3574 REMARK 3 T33: 0.1267 T12: 0.0037 REMARK 3 T13: 0.0136 T23: -0.0369 REMARK 3 L TENSOR REMARK 3 L11: 1.1583 L22: 1.8799 REMARK 3 L33: 1.2961 L12: 0.5759 REMARK 3 L13: 0.2848 L23: 0.3114 REMARK 3 S TENSOR REMARK 3 S11: 0.0873 S12: -0.0763 S13: -0.0203 REMARK 3 S21: 0.1438 S22: 0.0044 S23: -0.1897 REMARK 3 S31: -0.0223 S32: -0.1052 S33: -0.0618 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 34:72 REMARK 3 ORIGIN FOR THE GROUP (A): 36.5249 14.6881 -0.5807 REMARK 3 T TENSOR REMARK 3 T11: 0.1433 T22: 0.3927 REMARK 3 T33: 0.1186 T12: -0.0354 REMARK 3 T13: -0.0004 T23: -0.0672 REMARK 3 L TENSOR REMARK 3 L11: 1.6475 L22: 1.8622 REMARK 3 L33: 0.8202 L12: -0.6554 REMARK 3 L13: -0.3829 L23: 0.4607 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: 0.1699 S13: 0.1131 REMARK 3 S21: -0.1667 S22: 0.0204 S23: -0.0476 REMARK 3 S31: -0.0909 S32: 0.0008 S33: -0.0587 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 73:113 REMARK 3 ORIGIN FOR THE GROUP (A): 40.3455 13.6024 3.2457 REMARK 3 T TENSOR REMARK 3 T11: 0.1103 T22: 0.3628 REMARK 3 T33: 0.1284 T12: -0.0027 REMARK 3 T13: -0.0129 T23: -0.0619 REMARK 3 L TENSOR REMARK 3 L11: 1.6925 L22: 1.2218 REMARK 3 L33: 1.5887 L12: -0.2875 REMARK 3 L13: 0.0648 L23: 0.2637 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: 0.1201 S13: 0.0047 REMARK 3 S21: -0.0390 S22: -0.0385 S23: -0.1288 REMARK 3 S31: -0.0427 S32: -0.0500 S33: -0.0091 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND RESID 1:33 REMARK 3 ORIGIN FOR THE GROUP (A): 46.1867 21.5631 27.5890 REMARK 3 T TENSOR REMARK 3 T11: 0.2058 T22: 0.0990 REMARK 3 T33: 0.1591 T12: 0.0145 REMARK 3 T13: -0.0534 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 2.7099 L22: 1.6451 REMARK 3 L33: 1.3952 L12: 0.5930 REMARK 3 L13: 0.1902 L23: 0.0547 REMARK 3 S TENSOR REMARK 3 S11: 0.0526 S12: 0.2654 S13: -0.0145 REMARK 3 S21: -0.1987 S22: 0.0692 S23: -0.0423 REMARK 3 S31: 0.0395 S32: 0.0059 S33: -0.0015 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND RESID 34:84 REMARK 3 ORIGIN FOR THE GROUP (A): 46.2779 25.0073 36.0470 REMARK 3 T TENSOR REMARK 3 T11: 0.2530 T22: 0.0891 REMARK 3 T33: 0.1465 T12: -0.0085 REMARK 3 T13: -0.0661 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.3681 L22: 2.5976 REMARK 3 L33: 0.5326 L12: -0.2452 REMARK 3 L13: 0.0751 L23: -0.1494 REMARK 3 S TENSOR REMARK 3 S11: -0.0354 S12: 0.0006 S13: 0.0307 REMARK 3 S21: 0.1190 S22: -0.0252 S23: -0.0469 REMARK 3 S31: -0.0526 S32: -0.0466 S33: 0.0103 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND RESID 85:113 REMARK 3 ORIGIN FOR THE GROUP (A): 44.7606 17.1409 35.3981 REMARK 3 T TENSOR REMARK 3 T11: 0.2696 T22: 0.0634 REMARK 3 T33: 0.1304 T12: 0.0009 REMARK 3 T13: -0.0666 T23: 0.0360 REMARK 3 L TENSOR REMARK 3 L11: 3.2537 L22: 2.3230 REMARK 3 L33: 1.7340 L12: 0.0556 REMARK 3 L13: 0.4312 L23: 0.0370 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: 0.1112 S13: -0.1222 REMARK 3 S21: 0.1444 S22: 0.0557 S23: -0.0837 REMARK 3 S31: 0.0306 S32: -0.1192 S33: -0.0387 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 1139 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TP3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1000224108. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.23 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29019 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 34.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 1.12500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4GRW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3% PEG400, 2.2 M AMMONIUM SULFATE, 0.2 REMARK 280 M SODIUM CHLORIDE, 0.1 M HEPES, PH 7.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.85500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.91000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.88500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.91000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.85500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.88500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 236 O HOH A 257 1.97 REMARK 500 O HOH A 222 O HOH A 226 2.01 REMARK 500 OG SER B 62 O HOH B 201 2.07 REMARK 500 O HOH A 238 O HOH A 264 2.07 REMARK 500 O HOH B 252 O HOH B 272 2.09 REMARK 500 O HOH B 249 O HOH B 262 2.10 REMARK 500 O SER B 113 O HOH B 202 2.10 REMARK 500 O HOH B 243 O HOH B 266 2.13 REMARK 500 O HOH B 259 O HOH B 269 2.15 REMARK 500 O HOH A 252 O HOH A 260 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 220 O HOH A 262 4555 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 48 -39.77 -136.13 REMARK 500 VAL B 48 -41.74 -134.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 278 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH B 279 DISTANCE = 7.20 ANGSTROMS DBREF 5TP3 A 1 113 PDB 5TP3 5TP3 1 113 DBREF 5TP3 B 1 113 PDB 5TP3 5TP3 1 113 SEQRES 1 A 125 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 A 125 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 125 PHE THR LEU ASP TYR TYR TYR ILE GLY TRP PHE ARG GLN SEQRES 4 A 125 ALA PRO GLY LYS GLU ARG GLU ALA VAL SER CYS ILE SER SEQRES 5 A 125 GLY SER SER GLY SER THR TYR TYR PRO ASP SER VAL LYS SEQRES 6 A 125 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 A 125 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 A 125 ALA VAL TYR TYR CYS ALA THR ILE ARG SER SER SER TRP SEQRES 9 A 125 GLY GLY CYS VAL HIS TYR GLY MET ASP TYR TRP GLY LYS SEQRES 10 A 125 GLY THR GLN VAL THR VAL SER SER SEQRES 1 B 125 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 B 125 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 125 PHE THR LEU ASP TYR TYR TYR ILE GLY TRP PHE ARG GLN SEQRES 4 B 125 ALA PRO GLY LYS GLU ARG GLU ALA VAL SER CYS ILE SER SEQRES 5 B 125 GLY SER SER GLY SER THR TYR TYR PRO ASP SER VAL LYS SEQRES 6 B 125 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 B 125 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 B 125 ALA VAL TYR TYR CYS ALA THR ILE ARG SER SER SER TRP SEQRES 9 B 125 GLY GLY CYS VAL HIS TYR GLY MET ASP TYR TRP GLY LYS SEQRES 10 B 125 GLY THR GLN VAL THR VAL SER SER FORMUL 3 HOH *143(H2 O) HELIX 1 AA1 THR A 28 ASP A 30 5 3 HELIX 2 AA2 LYS A 83 THR A 87 5 5 HELIX 3 AA3 SER A 98 TRP A 100 5 3 HELIX 4 AA4 VAL A 100D MET A 100H 5 5 HELIX 5 AA5 THR B 28 ASP B 30 5 3 HELIX 6 AA6 LYS B 83 THR B 87 5 5 HELIX 7 AA7 SER B 98 TRP B 100 5 3 HELIX 8 AA8 VAL B 100D MET B 100H 5 5 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O ALA A 23 N GLN A 5 SHEET 3 AA1 4 THR A 77 MET A 82 -1 O MET A 82 N LEU A 18 SHEET 4 AA1 4 PHE A 67 ASP A 72 -1 N THR A 68 O GLN A 81 SHEET 1 AA2 6 LEU A 11 VAL A 12 0 SHEET 2 AA2 6 THR A 107 VAL A 111 1 O THR A 110 N VAL A 12 SHEET 3 AA2 6 ALA A 88 ARG A 96 -1 N ALA A 88 O VAL A 109 SHEET 4 AA2 6 TYR A 32 GLN A 39 -1 N PHE A 37 O TYR A 91 SHEET 5 AA2 6 GLU A 46 SER A 52 -1 O SER A 49 N TRP A 36 SHEET 6 AA2 6 THR A 57 TYR A 58 -1 O TYR A 58 N CYS A 50 SHEET 1 AA3 4 LEU A 11 VAL A 12 0 SHEET 2 AA3 4 THR A 107 VAL A 111 1 O THR A 110 N VAL A 12 SHEET 3 AA3 4 ALA A 88 ARG A 96 -1 N ALA A 88 O VAL A 109 SHEET 4 AA3 4 TYR A 102 TRP A 103 -1 O TYR A 102 N THR A 94 SHEET 1 AA4 4 GLN B 3 SER B 7 0 SHEET 2 AA4 4 LEU B 18 SER B 25 -1 O ALA B 23 N GLN B 5 SHEET 3 AA4 4 THR B 77 MET B 82 -1 O LEU B 80 N LEU B 20 SHEET 4 AA4 4 PHE B 67 ASP B 72 -1 N THR B 68 O GLN B 81 SHEET 1 AA5 6 LEU B 11 VAL B 12 0 SHEET 2 AA5 6 THR B 107 VAL B 111 1 O THR B 110 N VAL B 12 SHEET 3 AA5 6 ALA B 88 ARG B 96 -1 N TYR B 90 O THR B 107 SHEET 4 AA5 6 TYR B 32 GLN B 39 -1 N PHE B 37 O TYR B 91 SHEET 5 AA5 6 GLU B 46 SER B 52 -1 O SER B 49 N TRP B 36 SHEET 6 AA5 6 THR B 57 TYR B 58 -1 O TYR B 58 N CYS B 50 SHEET 1 AA6 4 LEU B 11 VAL B 12 0 SHEET 2 AA6 4 THR B 107 VAL B 111 1 O THR B 110 N VAL B 12 SHEET 3 AA6 4 ALA B 88 ARG B 96 -1 N TYR B 90 O THR B 107 SHEET 4 AA6 4 TYR B 102 TRP B 103 -1 O TYR B 102 N THR B 94 SSBOND 1 CYS A 22 CYS A 92 1555 1555 2.03 SSBOND 2 CYS A 50 CYS A 100C 1555 1555 2.05 SSBOND 3 CYS B 22 CYS B 92 1555 1555 2.03 SSBOND 4 CYS B 50 CYS B 100C 1555 1555 2.04 CRYST1 47.710 47.770 149.820 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020960 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020934 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006675 0.00000