HEADER METAL TRANSPORT, MEMBRANE PROTEIN 05-NOV-16 5TUA TITLE STRUCTURE OF A NA+-SELECTIVE MUTANT OF TWO-PORE CHANNEL FROM TITLE 2 ARABIDOPSIS THALIANA ATTPC1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TWO PORE CALCIUM CHANNEL PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CALCIUM CHANNEL PROTEIN 1,ATCCH1,FATTY ACID OXYGENATION UP- COMPND 5 REGULATED PROTEIN 2,VOLTAGE-DEPENDENT CALCIUM CHANNEL PROTEIN TPC1, COMPND 6 ATTPC1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: TPC1, CCH1, FOU2, AT4G03560, F9H3.19, T5L23.5; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS TWO-PORE CHANNEL, NA+-SELECTIVE, METAL TRANSPORT, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.GUO,W.ZENG,Y.JIANG REVDAT 6 04-OCT-23 5TUA 1 LINK REVDAT 5 20-NOV-19 5TUA 1 REMARK REVDAT 4 20-SEP-17 5TUA 1 REMARK REVDAT 3 08-FEB-17 5TUA 1 JRNL REVDAT 2 01-FEB-17 5TUA 1 JRNL REVDAT 1 18-JAN-17 5TUA 0 JRNL AUTH J.GUO,W.ZENG,Y.JIANG JRNL TITL TUNING THE ION SELECTIVITY OF TWO-PORE CHANNELS. JRNL REF PROC. NATL. ACAD. SCI. V. 114 1009 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 28096396 JRNL DOI 10.1073/PNAS.1616191114 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 62.8 REMARK 3 NUMBER OF REFLECTIONS : 14620 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.311 REMARK 3 R VALUE (WORKING SET) : 0.310 REMARK 3 FREE R VALUE : 0.323 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 727 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.5933 - 5.6233 0.95 4358 226 0.3189 0.3183 REMARK 3 2 5.6233 - 4.4647 0.97 4303 223 0.3023 0.3237 REMARK 3 3 4.4647 - 3.9007 0.74 3256 171 0.3057 0.3135 REMARK 3 4 3.9007 - 3.5442 0.31 1344 74 0.3129 0.3027 REMARK 3 5 3.5442 - 3.2903 0.15 632 33 0.3228 0.4806 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.510 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5254 REMARK 3 ANGLE : 0.866 7128 REMARK 3 CHIRALITY : 0.044 820 REMARK 3 PLANARITY : 0.007 878 REMARK 3 DIHEDRAL : 16.492 3038 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3939 -25.5005 25.9798 REMARK 3 T TENSOR REMARK 3 T11: 0.6388 T22: 1.2058 REMARK 3 T33: 1.1977 T12: -0.2291 REMARK 3 T13: -0.1682 T23: 0.2594 REMARK 3 L TENSOR REMARK 3 L11: 1.1775 L22: 1.7466 REMARK 3 L33: 2.2892 L12: -0.5183 REMARK 3 L13: -1.2302 L23: -0.6979 REMARK 3 S TENSOR REMARK 3 S11: -0.0030 S12: 0.0960 S13: 0.4526 REMARK 3 S21: 0.2381 S22: -0.1776 S23: -0.2177 REMARK 3 S31: 0.2655 S32: -0.4134 S33: 0.1433 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4808 -19.2874 2.8019 REMARK 3 T TENSOR REMARK 3 T11: -0.0077 T22: 0.2923 REMARK 3 T33: 0.6330 T12: 0.2854 REMARK 3 T13: 0.0633 T23: -0.5082 REMARK 3 L TENSOR REMARK 3 L11: 2.0921 L22: 0.2609 REMARK 3 L33: 0.7937 L12: -0.3123 REMARK 3 L13: -0.0750 L23: 0.4035 REMARK 3 S TENSOR REMARK 3 S11: 0.1634 S12: -0.3526 S13: -0.9310 REMARK 3 S21: 0.2959 S22: 0.1882 S23: -0.3641 REMARK 3 S31: 0.5015 S32: 0.0789 S33: 0.5146 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 296 THROUGH 398 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3446 -13.7414 18.8530 REMARK 3 T TENSOR REMARK 3 T11: 0.3158 T22: 1.0631 REMARK 3 T33: 0.6622 T12: -0.2645 REMARK 3 T13: -0.1833 T23: -0.1421 REMARK 3 L TENSOR REMARK 3 L11: 3.4908 L22: 3.3331 REMARK 3 L33: 2.3666 L12: 1.0846 REMARK 3 L13: -0.1995 L23: -1.8363 REMARK 3 S TENSOR REMARK 3 S11: 0.4018 S12: -1.5529 S13: -0.4138 REMARK 3 S21: 0.8406 S22: 0.0316 S23: 1.0621 REMARK 3 S31: 0.0683 S32: -0.8437 S33: -0.1062 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 399 THROUGH 547 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3281 -0.4409 37.9197 REMARK 3 T TENSOR REMARK 3 T11: 0.7352 T22: 1.1914 REMARK 3 T33: 0.5095 T12: -0.2551 REMARK 3 T13: -0.4948 T23: -0.2758 REMARK 3 L TENSOR REMARK 3 L11: 0.7245 L22: 0.4325 REMARK 3 L33: 1.4745 L12: -0.1670 REMARK 3 L13: 0.6501 L23: 0.0742 REMARK 3 S TENSOR REMARK 3 S11: 0.0624 S12: -0.4192 S13: -0.0512 REMARK 3 S21: 0.3187 S22: -0.0654 S23: -0.1276 REMARK 3 S31: 0.0647 S32: -0.2262 S33: 0.0064 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 548 THROUGH 686 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.9613 -9.7624 6.4752 REMARK 3 T TENSOR REMARK 3 T11: -0.2894 T22: 0.1617 REMARK 3 T33: 0.2686 T12: 0.0741 REMARK 3 T13: -0.2159 T23: -0.4680 REMARK 3 L TENSOR REMARK 3 L11: 0.1956 L22: 0.3071 REMARK 3 L33: 0.2521 L12: 0.1165 REMARK 3 L13: 0.1029 L23: 0.1728 REMARK 3 S TENSOR REMARK 3 S11: 0.0411 S12: -0.0318 S13: -0.0950 REMARK 3 S21: 0.0565 S22: 0.0277 S23: -0.2995 REMARK 3 S31: 0.1231 S32: 0.1554 S33: -0.1813 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TUA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000224840. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20921 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5E1J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24-26% PEG400, 100-150 MM BACL2, 100 REMARK 280 MM HEPES PH7.0 OR 100 MM MES PH6.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.56400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 108.56400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.26750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 78.18550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.26750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 78.18550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 108.56400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.26750 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 78.18550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 108.56400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.26750 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 78.18550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 66780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -168.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 BA BA A 805 LIES ON A SPECIAL POSITION. REMARK 375 BA BA A 810 LIES ON A SPECIAL POSITION. REMARK 375 BA BA A 811 LIES ON A SPECIAL POSITION. REMARK 375 NA NA A 812 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 3 REMARK 465 PRO A 4 REMARK 465 LEU A 5 REMARK 465 ILE A 6 REMARK 465 GLY A 7 REMARK 465 ARG A 8 REMARK 465 ASP A 9 REMARK 465 SER A 10 REMARK 465 LEU A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 GLY A 14 REMARK 465 GLY A 15 REMARK 465 THR A 16 REMARK 465 ASP A 17 REMARK 465 ARG A 18 REMARK 465 VAL A 19 REMARK 465 ARG A 20 REMARK 465 ARG A 21 REMARK 465 SER A 22 REMARK 465 GLU A 23 REMARK 465 ALA A 24 REMARK 465 ILE A 25 REMARK 465 THR A 26 REMARK 465 HIS A 27 REMARK 465 GLY A 28 REMARK 465 THR A 29 REMARK 465 PRO A 30 REMARK 465 PHE A 31 REMARK 465 GLN A 54 REMARK 465 SER A 55 REMARK 465 SER A 56 REMARK 465 LEU A 174 REMARK 465 SER A 175 REMARK 465 PRO A 176 REMARK 465 LEU A 177 REMARK 465 ALA A 178 REMARK 465 PHE A 179 REMARK 465 ASP A 180 REMARK 465 PHE A 181 REMARK 465 LEU A 182 REMARK 465 PRO A 183 REMARK 465 SER A 406 REMARK 465 LEU A 407 REMARK 465 PHE A 408 REMARK 465 GLU A 409 REMARK 465 HIS A 410 REMARK 465 PHE A 411 REMARK 465 PRO A 412 REMARK 465 ASP A 519 REMARK 465 GLU A 520 REMARK 465 ASN A 521 REMARK 465 THR A 522 REMARK 465 PHE A 523 REMARK 465 VAL A 591 REMARK 465 ASN A 592 REMARK 465 ALA A 593 REMARK 465 CYS A 687 REMARK 465 GLN A 688 REMARK 465 GLY A 689 REMARK 465 GLN A 690 REMARK 465 ASP A 691 REMARK 465 SER A 692 REMARK 465 GLN A 693 REMARK 465 GLU A 694 REMARK 465 LYS A 695 REMARK 465 ARG A 696 REMARK 465 ASN A 697 REMARK 465 ARG A 698 REMARK 465 ARG A 699 REMARK 465 ARG A 700 REMARK 465 SER A 701 REMARK 465 ALA A 702 REMARK 465 GLY A 703 REMARK 465 SER A 704 REMARK 465 LYS A 705 REMARK 465 SER A 706 REMARK 465 ARG A 707 REMARK 465 SER A 708 REMARK 465 GLN A 709 REMARK 465 ARG A 710 REMARK 465 VAL A 711 REMARK 465 ASP A 712 REMARK 465 THR A 713 REMARK 465 LEU A 714 REMARK 465 LEU A 715 REMARK 465 HIS A 716 REMARK 465 HIS A 717 REMARK 465 MET A 718 REMARK 465 LEU A 719 REMARK 465 GLY A 720 REMARK 465 ASP A 721 REMARK 465 GLU A 722 REMARK 465 LEU A 723 REMARK 465 SER A 724 REMARK 465 LYS A 725 REMARK 465 PRO A 726 REMARK 465 GLU A 727 REMARK 465 CYS A 728 REMARK 465 SER A 729 REMARK 465 THR A 730 REMARK 465 SER A 731 REMARK 465 ASP A 732 REMARK 465 THR A 733 REMARK 465 SER A 734 REMARK 465 THR A 735 REMARK 465 ALA A 736 REMARK 465 GLY A 737 REMARK 465 LEU A 738 REMARK 465 VAL A 739 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 PHE A 57 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 78 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE A 171 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 173 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 ILE A 342 CG1 CG2 CD1 REMARK 470 ARG A 379 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 381 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 524 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TRP A 529 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 529 CZ3 CH2 REMARK 470 GLU A 602 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 47 48.17 77.47 REMARK 500 PRO A 99 -158.32 -78.69 REMARK 500 CYS A 101 -100.38 -110.08 REMARK 500 ARG A 104 89.33 51.52 REMARK 500 TYR A 108 114.13 42.97 REMARK 500 GLU A 111 -12.61 -158.72 REMARK 500 TYR A 114 -160.61 60.66 REMARK 500 GLU A 142 -161.58 -102.34 REMARK 500 PHE A 238 52.44 -106.22 REMARK 500 ASP A 240 59.81 -119.04 REMARK 500 GLN A 243 29.82 -69.87 REMARK 500 VAL A 247 46.95 -107.50 REMARK 500 THR A 249 15.22 -62.71 REMARK 500 SER A 250 -123.97 67.52 REMARK 500 THR A 264 9.39 57.33 REMARK 500 ASN A 266 30.63 -145.89 REMARK 500 TRP A 280 3.25 -64.63 REMARK 500 LYS A 338 9.84 57.38 REMARK 500 ASN A 345 -8.84 -55.86 REMARK 500 PRO A 361 -109.01 -64.35 REMARK 500 LYS A 362 -168.79 -128.74 REMARK 500 LYS A 365 -169.23 -165.71 REMARK 500 ASP A 377 14.77 59.72 REMARK 500 ASP A 380 -72.47 -125.90 REMARK 500 PHE A 381 77.66 57.60 REMARK 500 ARG A 398 -72.39 -82.60 REMARK 500 GLU A 457 10.50 59.92 REMARK 500 ALA A 604 -82.28 -121.92 REMARK 500 LEU A 610 61.99 -107.93 REMARK 500 PHE A 613 12.88 93.78 REMARK 500 VAL A 629 -23.12 79.31 REMARK 500 TRP A 647 10.42 -61.95 REMARK 500 LEU A 662 -70.88 -97.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 802 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 124 OE1 REMARK 620 2 GLU A 124 OE2 43.0 REMARK 620 3 ASP A 166 OD1 88.0 110.5 REMARK 620 4 ASP A 170 OD2 60.0 60.2 142.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA A 803 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 239 O REMARK 620 2 GLU A 239 OE2 78.4 REMARK 620 3 ASP A 240 OD1 69.1 72.8 REMARK 620 4 GLU A 457 OE2 53.8 113.1 117.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA A 804 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 240 OD2 REMARK 620 2 ASP A 454 OD1 66.5 REMARK 620 3 ASP A 454 OD2 66.0 0.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 801 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 335 OD1 REMARK 620 2 ASP A 337 OD1 65.2 REMARK 620 3 ASP A 337 OD2 113.1 54.3 REMARK 620 4 ASN A 339 OD1 63.8 79.3 78.7 REMARK 620 5 GLU A 341 O 61.5 124.1 170.3 91.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA A 805 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 605 OE2 REMARK 620 2 GLU A 605 OE2 0.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 812 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 630 OD1 REMARK 620 2 ASN A 630 OD1 0.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BA A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BA A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BA A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 812 DBREF 5TUA A 1 733 UNP Q94KI8 TPC1_ARATH 1 733 SEQADV 5TUA ALA A 265 UNP Q94KI8 SER 265 CONFLICT SEQADV 5TUA VAL A 629 UNP Q94KI8 MET 629 CONFLICT SEQADV 5TUA ASN A 630 UNP Q94KI8 GLY 630 CONFLICT SEQADV 5TUA SER A 734 UNP Q94KI8 EXPRESSION TAG SEQADV 5TUA THR A 735 UNP Q94KI8 EXPRESSION TAG SEQADV 5TUA ALA A 736 UNP Q94KI8 EXPRESSION TAG SEQADV 5TUA GLY A 737 UNP Q94KI8 EXPRESSION TAG SEQADV 5TUA LEU A 738 UNP Q94KI8 EXPRESSION TAG SEQADV 5TUA VAL A 739 UNP Q94KI8 EXPRESSION TAG SEQRES 1 A 739 MET GLU ASP PRO LEU ILE GLY ARG ASP SER LEU GLY GLY SEQRES 2 A 739 GLY GLY THR ASP ARG VAL ARG ARG SER GLU ALA ILE THR SEQRES 3 A 739 HIS GLY THR PRO PHE GLN LYS ALA ALA ALA LEU VAL ASP SEQRES 4 A 739 LEU ALA GLU ASP GLY ILE GLY LEU PRO VAL GLU ILE LEU SEQRES 5 A 739 ASP GLN SER SER PHE GLY GLU SER ALA ARG TYR TYR PHE SEQRES 6 A 739 ILE PHE THR ARG LEU ASP LEU ILE TRP SER LEU ASN TYR SEQRES 7 A 739 PHE ALA LEU LEU PHE LEU ASN PHE PHE GLU GLN PRO LEU SEQRES 8 A 739 TRP CYS GLU LYS ASN PRO LYS PRO SER CYS LYS ASP ARG SEQRES 9 A 739 ASP TYR TYR TYR LEU GLY GLU LEU PRO TYR LEU THR ASN SEQRES 10 A 739 ALA GLU SER ILE ILE TYR GLU VAL ILE THR LEU ALA ILE SEQRES 11 A 739 LEU LEU VAL HIS THR PHE PHE PRO ILE SER TYR GLU GLY SEQRES 12 A 739 SER ARG ILE PHE TRP THR SER ARG LEU ASN LEU VAL LYS SEQRES 13 A 739 VAL ALA CYS VAL VAL ILE LEU PHE VAL ASP VAL LEU VAL SEQRES 14 A 739 ASP PHE LEU TYR LEU SER PRO LEU ALA PHE ASP PHE LEU SEQRES 15 A 739 PRO PHE ARG ILE ALA PRO TYR VAL ARG VAL ILE ILE PHE SEQRES 16 A 739 ILE LEU SER ILE ARG GLU LEU ARG ASP THR LEU VAL LEU SEQRES 17 A 739 LEU SER GLY MET LEU GLY THR TYR LEU ASN ILE LEU ALA SEQRES 18 A 739 LEU TRP MET LEU PHE LEU LEU PHE ALA SER TRP ILE ALA SEQRES 19 A 739 PHE VAL MET PHE GLU ASP THR GLN GLN GLY LEU THR VAL SEQRES 20 A 739 PHE THR SER TYR GLY ALA THR LEU TYR GLN MET PHE ILE SEQRES 21 A 739 LEU PHE THR THR ALA ASN ASN PRO ASP VAL TRP ILE PRO SEQRES 22 A 739 ALA TYR LYS SER SER ARG TRP SER SER VAL PHE PHE VAL SEQRES 23 A 739 LEU TYR VAL LEU ILE GLY VAL TYR PHE VAL THR ASN LEU SEQRES 24 A 739 ILE LEU ALA VAL VAL TYR ASP SER PHE LYS GLU GLN LEU SEQRES 25 A 739 ALA LYS GLN VAL SER GLY MET ASP GLN MET LYS ARG ARG SEQRES 26 A 739 MET LEU GLU LYS ALA PHE GLY LEU ILE ASP SER ASP LYS SEQRES 27 A 739 ASN GLY GLU ILE ASP LYS ASN GLN CYS ILE LYS LEU PHE SEQRES 28 A 739 GLU GLN LEU THR ASN TYR ARG THR LEU PRO LYS ILE SER SEQRES 29 A 739 LYS GLU GLU PHE GLY LEU ILE PHE ASP GLU LEU ASP ASP SEQRES 30 A 739 THR ARG ASP PHE LYS ILE ASN LYS ASP GLU PHE ALA ASP SEQRES 31 A 739 LEU CYS GLN ALA ILE ALA LEU ARG PHE GLN LYS GLU GLU SEQRES 32 A 739 VAL PRO SER LEU PHE GLU HIS PHE PRO GLN ILE TYR HIS SEQRES 33 A 739 SER ALA LEU SER GLN GLN LEU ARG ALA PHE VAL ARG SER SEQRES 34 A 739 PRO ASN PHE GLY TYR ALA ILE SER PHE ILE LEU ILE ILE SEQRES 35 A 739 ASN PHE ILE ALA VAL VAL VAL GLU THR THR LEU ASP ILE SEQRES 36 A 739 GLU GLU SER SER ALA GLN LYS PRO TRP GLN VAL ALA GLU SEQRES 37 A 739 PHE VAL PHE GLY TRP ILE TYR VAL LEU GLU MET ALA LEU SEQRES 38 A 739 LYS ILE TYR THR TYR GLY PHE GLU ASN TYR TRP ARG GLU SEQRES 39 A 739 GLY ALA ASN ARG PHE ASP PHE LEU VAL THR TRP VAL ILE SEQRES 40 A 739 VAL ILE GLY GLU THR ALA THR PHE ILE THR PRO ASP GLU SEQRES 41 A 739 ASN THR PHE PHE SER ASN GLY GLU TRP ILE ARG TYR LEU SEQRES 42 A 739 LEU LEU ALA ARG MET LEU ARG LEU ILE ARG LEU LEU MET SEQRES 43 A 739 ASN VAL GLN ARG TYR ARG ALA PHE ILE ALA THR PHE ILE SEQRES 44 A 739 THR LEU ILE PRO SER LEU MET PRO TYR LEU GLY THR ILE SEQRES 45 A 739 PHE CYS VAL LEU CYS ILE TYR CYS SER ILE GLY VAL GLN SEQRES 46 A 739 VAL PHE GLY GLY LEU VAL ASN ALA GLY ASN LYS LYS LEU SEQRES 47 A 739 PHE GLU THR GLU LEU ALA GLU ASP ASP TYR LEU LEU PHE SEQRES 48 A 739 ASN PHE ASN ASP TYR PRO ASN GLY MET VAL THR LEU PHE SEQRES 49 A 739 ASN LEU LEU VAL VAL ASN ASN TRP GLN VAL TRP MET GLU SEQRES 50 A 739 SER TYR LYS ASP LEU THR GLY THR TRP TRP SER ILE THR SEQRES 51 A 739 TYR PHE VAL SER PHE TYR VAL ILE THR ILE LEU LEU LEU SEQRES 52 A 739 LEU ASN LEU VAL VAL ALA PHE VAL LEU GLU ALA PHE PHE SEQRES 53 A 739 THR GLU LEU ASP LEU GLU GLU GLU GLU LYS CYS GLN GLY SEQRES 54 A 739 GLN ASP SER GLN GLU LYS ARG ASN ARG ARG ARG SER ALA SEQRES 55 A 739 GLY SER LYS SER ARG SER GLN ARG VAL ASP THR LEU LEU SEQRES 56 A 739 HIS HIS MET LEU GLY ASP GLU LEU SER LYS PRO GLU CYS SEQRES 57 A 739 SER THR SER ASP THR SER THR ALA GLY LEU VAL HET CA A 801 1 HET CA A 802 1 HET BA A 803 1 HET BA A 804 1 HET BA A 805 1 HET BA A 806 1 HET BA A 807 1 HET BA A 808 1 HET BA A 809 1 HET BA A 810 1 HET BA A 811 1 HET NA A 812 1 HETNAM CA CALCIUM ION HETNAM BA BARIUM ION HETNAM NA SODIUM ION FORMUL 2 CA 2(CA 2+) FORMUL 4 BA 9(BA 2+) FORMUL 13 NA NA 1+ HELIX 1 AA1 GLN A 32 LEU A 47 1 16 HELIX 2 AA2 GLY A 58 GLU A 88 1 31 HELIX 3 AA3 THR A 116 PHE A 137 1 22 HELIX 4 AA4 PRO A 138 TYR A 141 5 4 HELIX 5 AA5 GLY A 143 TRP A 148 1 6 HELIX 6 AA6 SER A 150 TYR A 173 1 24 HELIX 7 AA7 ILE A 186 LEU A 197 1 12 HELIX 8 AA8 ILE A 199 PHE A 238 1 40 HELIX 9 AA9 THR A 241 LEU A 245 5 5 HELIX 10 AB1 THR A 249 THR A 263 1 15 HELIX 11 AB2 ASN A 266 TRP A 271 1 6 HELIX 12 AB3 TRP A 271 SER A 278 1 8 HELIX 13 AB4 SER A 281 PHE A 295 1 15 HELIX 14 AB5 VAL A 296 ASP A 335 1 40 HELIX 15 AB6 ASP A 343 ARG A 358 1 16 HELIX 16 AB7 LYS A 365 ASP A 377 1 13 HELIX 17 AB8 LYS A 385 ARG A 398 1 14 HELIX 18 AB9 SER A 420 ARG A 428 1 9 HELIX 19 AC1 SER A 429 ILE A 455 1 27 HELIX 20 AC2 ALA A 460 GLY A 487 1 28 HELIX 21 AC3 GLY A 487 ARG A 493 1 7 HELIX 22 AC4 GLU A 494 THR A 517 1 24 HELIX 23 AC5 GLY A 527 LEU A 533 1 7 HELIX 24 AC6 LEU A 534 VAL A 548 5 15 HELIX 25 AC7 TYR A 551 LEU A 565 1 15 HELIX 26 AC8 LEU A 565 PHE A 587 1 23 HELIX 27 AC9 ASN A 595 LEU A 603 1 9 HELIX 28 AD1 ALA A 604 LEU A 609 1 6 HELIX 29 AD2 ASP A 615 VAL A 628 1 14 HELIX 30 AD3 ASN A 631 GLY A 644 1 14 HELIX 31 AD4 THR A 645 SER A 648 5 4 HELIX 32 AD5 ILE A 649 ILE A 660 1 12 HELIX 33 AD6 LEU A 662 GLU A 685 1 24 SHEET 1 AA1 2 GLU A 341 ILE A 342 0 SHEET 2 AA1 2 ILE A 383 ASN A 384 -1 O ILE A 383 N ILE A 342 LINK OE1 GLU A 124 CA CA A 802 1555 1555 3.20 LINK OE2 GLU A 124 CA CA A 802 1555 1555 2.57 LINK OD1 ASP A 166 CA CA A 802 1555 1555 2.80 LINK OD2 ASP A 170 CA CA A 802 1555 1555 2.44 LINK O GLU A 239 BA BA A 803 1555 4555 2.76 LINK OE2 GLU A 239 BA BA A 803 1555 4555 2.75 LINK OD1 ASP A 240 BA BA A 803 1555 4555 2.75 LINK OD2 ASP A 240 BA BA A 804 1555 4555 2.75 LINK OD1 ASP A 335 CA CA A 801 1555 1555 2.42 LINK OD1 ASP A 337 CA CA A 801 1555 1555 2.35 LINK OD2 ASP A 337 CA CA A 801 1555 1555 2.46 LINK OD1 ASN A 339 CA CA A 801 1555 1555 2.40 LINK O GLU A 341 CA CA A 801 1555 1555 2.31 LINK OD1 ASP A 454 BA BA A 804 1555 1555 2.75 LINK OD2 ASP A 454 BA BA A 804 1555 1555 2.75 LINK OE2 GLU A 457 BA BA A 803 1555 1555 2.75 LINK OE2 GLU A 605 BA BA A 805 1555 1555 3.34 LINK OE2 GLU A 605 BA BA A 805 1555 4555 3.34 LINK OD1 ASN A 630 NA NA A 812 1555 1555 2.45 LINK OD1 ASN A 630 NA NA A 812 1555 4555 2.45 CISPEP 1 SER A 100 CYS A 101 0 5.83 SITE 1 AC1 4 ASP A 335 ASP A 337 ASN A 339 GLU A 341 SITE 1 AC2 4 TRP A 92 GLU A 124 ASP A 166 ASP A 170 SITE 1 AC3 3 GLU A 239 ASP A 240 GLU A 457 SITE 1 AC4 2 ASP A 240 ASP A 454 SITE 1 AC5 1 GLU A 605 SITE 1 AC6 1 ASN A 630 CRYST1 88.535 156.371 217.128 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011295 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006395 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004606 0.00000