HEADER TRANSFERASE/TRANSFERASE INHIBITOR 10-NOV-16 5TVT TITLE STRUCTURE OF MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 2-333; COMPND 5 SYNONYM: HMELK,PROTEIN KINASE EG3,PEG3 KINASE,PROTEIN KINASE PK38, COMPND 6 HPK38,TYROSINE-PROTEIN KINASE MELK; COMPND 7 EC: 2.7.11.1,2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MELK, KIAA0175; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE INHIBITOR, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.-Y.SEO,H.HUANG,N.S.GRAY,S.DHE-PAGANON REVDAT 2 06-MAR-24 5TVT 1 REMARK REVDAT 1 15-NOV-17 5TVT 0 JRNL AUTH H.-Y.SEO,S.DHE-PAGANON JRNL TITL STRUCTURE OF MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 19214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.3646 - 4.3574 0.99 2720 155 0.1703 0.2064 REMARK 3 2 4.3574 - 3.4604 1.00 2625 146 0.1632 0.1992 REMARK 3 3 3.4604 - 3.0235 1.00 2621 134 0.1939 0.2490 REMARK 3 4 3.0235 - 2.7473 1.00 2598 121 0.2073 0.2399 REMARK 3 5 2.7473 - 2.5505 1.00 2569 129 0.2230 0.2914 REMARK 3 6 2.5505 - 2.4002 1.00 2587 121 0.2524 0.2923 REMARK 3 7 2.4002 - 2.2800 1.00 2562 126 0.2740 0.3267 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.65 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2631 REMARK 3 ANGLE : 0.769 3573 REMARK 3 CHIRALITY : 0.047 399 REMARK 3 PLANARITY : 0.006 444 REMARK 3 DIHEDRAL : 16.734 1564 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9597 78.1389 -6.1218 REMARK 3 T TENSOR REMARK 3 T11: 0.3842 T22: 0.4849 REMARK 3 T33: 0.4801 T12: 0.0175 REMARK 3 T13: 0.0738 T23: 0.1041 REMARK 3 L TENSOR REMARK 3 L11: 2.8869 L22: 1.3668 REMARK 3 L33: 0.7896 L12: 0.3406 REMARK 3 L13: 0.2247 L23: -0.5731 REMARK 3 S TENSOR REMARK 3 S11: -0.0127 S12: 0.4015 S13: 0.7018 REMARK 3 S21: -0.2839 S22: -0.0857 S23: -0.3578 REMARK 3 S31: -0.2712 S32: -0.0254 S33: 0.0125 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9376 78.4587 8.2100 REMARK 3 T TENSOR REMARK 3 T11: 0.5108 T22: 0.5484 REMARK 3 T33: 0.5844 T12: 0.0004 REMARK 3 T13: -0.0553 T23: -0.0123 REMARK 3 L TENSOR REMARK 3 L11: 2.0155 L22: 1.8618 REMARK 3 L33: 2.3427 L12: 0.4965 REMARK 3 L13: 0.3219 L23: 1.1640 REMARK 3 S TENSOR REMARK 3 S11: -0.2247 S12: -0.3687 S13: 0.7577 REMARK 3 S21: 0.1851 S22: -0.1230 S23: -0.2944 REMARK 3 S31: -0.8232 S32: 0.0256 S33: 0.0310 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0291 72.3290 8.4612 REMARK 3 T TENSOR REMARK 3 T11: 0.4173 T22: 0.3160 REMARK 3 T33: 0.3279 T12: -0.0257 REMARK 3 T13: -0.0460 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 2.6659 L22: 1.4829 REMARK 3 L33: 1.8605 L12: -0.2836 REMARK 3 L13: -1.5611 L23: -0.5110 REMARK 3 S TENSOR REMARK 3 S11: -0.1803 S12: 0.2265 S13: 0.0108 REMARK 3 S21: -0.0334 S22: 0.0670 S23: 0.0355 REMARK 3 S31: 0.2491 S32: -0.1066 S33: 0.0532 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8536 79.4087 24.0517 REMARK 3 T TENSOR REMARK 3 T11: 0.5379 T22: 0.5195 REMARK 3 T33: 0.4932 T12: -0.0051 REMARK 3 T13: -0.0612 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 1.2678 L22: 0.3709 REMARK 3 L33: 1.8176 L12: -0.3527 REMARK 3 L13: 0.1121 L23: -0.2849 REMARK 3 S TENSOR REMARK 3 S11: 0.0946 S12: -0.3705 S13: -0.0403 REMARK 3 S21: 0.2110 S22: 0.0801 S23: -0.3499 REMARK 3 S31: 0.0741 S32: 0.4541 S33: 0.0064 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 187 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1411 76.7152 24.7736 REMARK 3 T TENSOR REMARK 3 T11: 0.3772 T22: 0.3671 REMARK 3 T33: 0.3821 T12: -0.0221 REMARK 3 T13: 0.0492 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 1.9240 L22: 1.6525 REMARK 3 L33: 2.5566 L12: 0.6912 REMARK 3 L13: 0.1852 L23: 0.3288 REMARK 3 S TENSOR REMARK 3 S11: -0.0653 S12: -0.3592 S13: 0.0463 REMARK 3 S21: 0.3895 S22: -0.0366 S23: 0.3177 REMARK 3 S31: 0.1199 S32: -0.1188 S33: 0.0241 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 265 THROUGH 293 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7463 56.2092 3.5562 REMARK 3 T TENSOR REMARK 3 T11: 0.7684 T22: 0.4547 REMARK 3 T33: 0.6023 T12: -0.0109 REMARK 3 T13: -0.0135 T23: -0.0737 REMARK 3 L TENSOR REMARK 3 L11: 0.6411 L22: 0.7319 REMARK 3 L33: 1.3124 L12: -0.5823 REMARK 3 L13: -0.3331 L23: -0.3472 REMARK 3 S TENSOR REMARK 3 S11: -0.1669 S12: 0.1913 S13: -0.2109 REMARK 3 S21: 0.0364 S22: -0.0418 S23: -0.0154 REMARK 3 S31: 0.6891 S32: 0.1271 S33: 0.1613 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 294 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8968 59.3467 -5.4467 REMARK 3 T TENSOR REMARK 3 T11: 0.6470 T22: 0.5076 REMARK 3 T33: 0.5406 T12: 0.0887 REMARK 3 T13: -0.0166 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 2.3921 L22: 2.8436 REMARK 3 L33: 2.4879 L12: -0.5669 REMARK 3 L13: -0.3315 L23: 0.3508 REMARK 3 S TENSOR REMARK 3 S11: 0.2553 S12: 0.1440 S13: -0.3627 REMARK 3 S21: -0.1320 S22: -0.1800 S23: -0.0518 REMARK 3 S31: 0.4588 S32: 0.4165 S33: 0.1009 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TVT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000224897. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19214 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 29.362 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.09435 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG3350, 0.1 M MGCL, 0.1M HEPES PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.34500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.52000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.32500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.52000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.34500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.32500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 157 REMARK 465 LYS A 158 REMARK 465 GLY A 159 REMARK 465 ASN A 160 REMARK 465 LYS A 161 REMARK 465 ASP A 162 REMARK 465 TYR A 163 REMARK 465 HIS A 164 REMARK 465 LEU A 165 REMARK 465 GLN A 166 REMARK 465 THR A 167 REMARK 465 CYS A 168 REMARK 465 CYS A 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 22 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 49 OG REMARK 470 ASP A 50 CG OD1 OD2 REMARK 470 GLU A 59 CG CD OE1 OE2 REMARK 470 ARG A 65 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 LYS A 225 CG CD CE NZ REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 GLN A 241 CG CD OE1 NE2 REMARK 470 LYS A 249 CG CD CE NZ REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 ASN A 277 CG OD1 ND2 REMARK 470 PHE A 279 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 280 CG1 CG2 CD1 REMARK 470 HIS A 281 CG ND1 CD2 CE1 NE2 REMARK 470 VAL A 292 CG1 CG2 REMARK 470 ARG A 295 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 296 CG OD1 ND2 REMARK 470 ARG A 331 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 502 O HOH A 579 1.76 REMARK 500 O HOH A 578 O HOH A 589 1.92 REMARK 500 O HOH A 557 O HOH A 592 1.93 REMARK 500 O HOH A 568 O HOH A 577 1.98 REMARK 500 NH1 ARG A 333 O HOH A 501 2.01 REMARK 500 O HOH A 570 O HOH A 595 2.06 REMARK 500 O HOH A 578 O HOH A 582 2.08 REMARK 500 O SER A 125 O HOH A 502 2.12 REMARK 500 N ASP A 285 O HOH A 503 2.12 REMARK 500 O HOH A 582 O HOH A 589 2.16 REMARK 500 O HOH A 554 O HOH A 572 2.17 REMARK 500 OG1 THR A 16 NZ LYS A 24 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 183 N ARG A 295 2575 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 14 -148.91 -106.78 REMARK 500 ASP A 102 -57.43 65.40 REMARK 500 ASP A 132 48.99 -141.84 REMARK 500 ASP A 150 82.76 65.58 REMARK 500 PRO A 278 -159.59 2.83 REMARK 500 ILE A 280 -157.08 -81.06 REMARK 500 HIS A 294 12.66 -142.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 277 PRO A 278 -145.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7LV A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TWL RELATED DB: PDB REMARK 900 RELATED ID: 5TWY RELATED DB: PDB REMARK 900 RELATED ID: 5TWU RELATED DB: PDB REMARK 900 RELATED ID: 5TWZ RELATED DB: PDB DBREF 5TVT A 2 333 UNP Q14680 MELK_HUMAN 2 333 SEQADV 5TVT GLY A 0 UNP Q14680 EXPRESSION TAG SEQADV 5TVT SER A 1 UNP Q14680 EXPRESSION TAG SEQRES 1 A 334 GLY SER LYS ASP TYR ASP GLU LEU LEU LYS TYR TYR GLU SEQRES 2 A 334 LEU HIS GLU THR ILE GLY THR GLY GLY PHE ALA LYS VAL SEQRES 3 A 334 LYS LEU ALA CYS HIS ILE LEU THR GLY GLU MET VAL ALA SEQRES 4 A 334 ILE LYS ILE MET ASP LYS ASN THR LEU GLY SER ASP LEU SEQRES 5 A 334 PRO ARG ILE LYS THR GLU ILE GLU ALA LEU LYS ASN LEU SEQRES 6 A 334 ARG HIS GLN HIS ILE CYS GLN LEU TYR HIS VAL LEU GLU SEQRES 7 A 334 THR ALA ASN LYS ILE PHE MET VAL LEU GLU TYR CYS PRO SEQRES 8 A 334 GLY GLY GLU LEU PHE ASP TYR ILE ILE SER GLN ASP ARG SEQRES 9 A 334 LEU SER GLU GLU GLU THR ARG VAL VAL PHE ARG GLN ILE SEQRES 10 A 334 VAL SER ALA VAL ALA TYR VAL HIS SER GLN GLY TYR ALA SEQRES 11 A 334 HIS ARG ASP LEU LYS PRO GLU ASN LEU LEU PHE ASP GLU SEQRES 12 A 334 TYR HIS LYS LEU LYS LEU ILE ASP PHE GLY LEU CYS ALA SEQRES 13 A 334 LYS PRO LYS GLY ASN LYS ASP TYR HIS LEU GLN THR CYS SEQRES 14 A 334 CYS GLY SER LEU ALA TYR ALA ALA PRO GLU LEU ILE GLN SEQRES 15 A 334 GLY LYS SER TYR LEU GLY SER GLU ALA ASP VAL TRP SER SEQRES 16 A 334 MET GLY ILE LEU LEU TYR VAL LEU MET CYS GLY PHE LEU SEQRES 17 A 334 PRO PHE ASP ASP ASP ASN VAL MET ALA LEU TYR LYS LYS SEQRES 18 A 334 ILE MET ARG GLY LYS TYR ASP VAL PRO LYS TRP LEU SER SEQRES 19 A 334 PRO SER SER ILE LEU LEU LEU GLN GLN MET LEU GLN VAL SEQRES 20 A 334 ASP PRO LYS LYS ARG ILE SER MET LYS ASN LEU LEU ASN SEQRES 21 A 334 HIS PRO TRP ILE MET GLN ASP TYR ASN TYR PRO VAL GLU SEQRES 22 A 334 TRP GLN SER LYS ASN PRO PHE ILE HIS LEU ASP ASP ASP SEQRES 23 A 334 CYS VAL THR GLU LEU SER VAL HIS HIS ARG ASN ASN ARG SEQRES 24 A 334 GLN THR MET GLU ASP LEU ILE SER LEU TRP GLN TYR ASP SEQRES 25 A 334 HIS LEU THR ALA THR TYR LEU LEU LEU LEU ALA LYS LYS SEQRES 26 A 334 ALA ARG GLY LYS PRO VAL ARG LEU ARG HET 7LV A 401 35 HETNAM 7LV 9-(3,5-DICHLORO-4-HYDROXYPHENYL)-1-{TRANS-4- HETNAM 2 7LV [(DIMETHYLAMINO)METHYL]CYCLOHEXYL}-3-METHYL-3,4- HETNAM 3 7LV DIHYDROPYRIMIDO[5,4-C][1,5]NAPHTHYRIDIN-2(1H)-ONE FORMUL 2 7LV C26 H29 CL2 N5 O2 FORMUL 3 HOH *97(H2 O) HELIX 1 AA1 SER A 1 TYR A 10 1 10 HELIX 2 AA2 LEU A 47 SER A 49 5 3 HELIX 3 AA3 ASP A 50 ASN A 63 1 14 HELIX 4 AA4 GLU A 93 GLN A 101 1 9 HELIX 5 AA5 SER A 105 GLN A 126 1 22 HELIX 6 AA6 LYS A 134 GLU A 136 5 3 HELIX 7 AA7 SER A 171 ALA A 175 5 5 HELIX 8 AA8 ALA A 176 GLN A 181 1 6 HELIX 9 AA9 LEU A 186 GLY A 205 1 20 HELIX 10 AB1 ASN A 213 GLY A 224 1 12 HELIX 11 AB2 SER A 233 LEU A 244 1 12 HELIX 12 AB3 ASP A 247 ARG A 251 5 5 HELIX 13 AB4 SER A 253 ASN A 259 1 7 HELIX 14 AB5 HIS A 260 GLN A 265 1 6 HELIX 15 AB6 ASP A 283 VAL A 292 1 10 HELIX 16 AB7 ASN A 297 LEU A 307 1 11 HELIX 17 AB8 ASP A 311 ARG A 326 1 16 SHEET 1 AA1 5 TYR A 11 THR A 19 0 SHEET 2 AA1 5 ALA A 23 HIS A 30 -1 O LEU A 27 N HIS A 14 SHEET 3 AA1 5 MET A 36 ASP A 43 -1 O ILE A 41 N LYS A 24 SHEET 4 AA1 5 LYS A 81 GLU A 87 -1 O LEU A 86 N ALA A 38 SHEET 5 AA1 5 LEU A 72 GLU A 77 -1 N TYR A 73 O VAL A 85 SHEET 1 AA2 2 LEU A 138 PHE A 140 0 SHEET 2 AA2 2 LEU A 146 LEU A 148 -1 O LYS A 147 N LEU A 139 SITE 1 AC1 11 ILE A 17 ALA A 38 LYS A 40 GLU A 57 SITE 2 AC1 11 LEU A 61 GLU A 87 TYR A 88 CYS A 89 SITE 3 AC1 11 LEU A 139 ILE A 149 ASP A 150 CRYST1 56.690 68.650 105.040 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017640 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014567 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009520 0.00000