HEADER IMMUNE SYSTEM 17-NOV-16 5TXS TITLE CRYSTAL STRUCTURE OF AN ANAPLASTIC LYMPHOMA KINASE-DERIVED TITLE 2 NEUROBLASTOMA TUMOR ANTIGEN BOUND TO THE HUMAN MAJOR TITLE 3 HISTOCOMPATIBILITY COMPLEX CLASS I MOLECULE HLA-B*1501 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-15 ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MHC CLASS I ANTIGEN B*15; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: ANAPESTIC LYMPHOMA KINASE-DERIVED NEUROBLASTOMA TUMOR COMPND 12 ANTIGEN; COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-B, HLAB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_TAXID: 9606 KEYWDS LYMPHOMA KINASE-DERIVED NEUROBLASTOMA TUMOR ANTIGEN, HUMAN MAJOR KEYWDS 2 HISTOCOMPATIBILITY COMPLEX CLASS I, MHC-I, COMPLEX, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.TOOR,A.A.RAO,S.SALAMA,S.TRIPATHI,D.HAUSSLER,N.G.SGOURAKIS REVDAT 3 04-OCT-23 5TXS 1 REMARK REVDAT 2 21-MAR-18 5TXS 1 JRNL REVDAT 1 29-NOV-17 5TXS 0 JRNL AUTH J.S.TOOR,A.A.RAO,A.C.MCSHAN,M.YARMARKOVICH,S.NERLI, JRNL AUTH 2 K.YAMAGUCHI,A.A.MADEJSKA,S.NGUYEN,S.TRIPATHI,J.M.MARIS, JRNL AUTH 3 S.R.SALAMA,D.HAUSSLER,N.G.SGOURAKIS JRNL TITL A RECURRENT MUTATION IN ANAPLASTIC LYMPHOMA KINASE WITH JRNL TITL 2 DISTINCT NEOEPITOPE CONFORMATIONS. JRNL REF FRONT IMMUNOL V. 9 99 2018 JRNL REFN ESSN 1664-3224 JRNL PMID 29441070 JRNL DOI 10.3389/FIMMU.2018.00099 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 51234 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8566 - 4.0902 1.00 3762 153 0.1366 0.1695 REMARK 3 2 4.0902 - 3.2468 1.00 3581 145 0.1429 0.1643 REMARK 3 3 3.2468 - 2.8364 1.00 3537 143 0.1573 0.2098 REMARK 3 4 2.8364 - 2.5771 1.00 3550 145 0.1641 0.2150 REMARK 3 5 2.5771 - 2.3924 1.00 3499 142 0.1557 0.2094 REMARK 3 6 2.3924 - 2.2514 1.00 3524 144 0.1518 0.1943 REMARK 3 7 2.2514 - 2.1386 1.00 3509 142 0.1550 0.1826 REMARK 3 8 2.1386 - 2.0455 1.00 3474 141 0.1543 0.2086 REMARK 3 9 2.0455 - 1.9668 1.00 3472 141 0.1548 0.2047 REMARK 3 10 1.9668 - 1.8989 1.00 3484 142 0.1737 0.2058 REMARK 3 11 1.8989 - 1.8395 1.00 3495 142 0.1774 0.2268 REMARK 3 12 1.8395 - 1.7870 1.00 3440 139 0.1874 0.2528 REMARK 3 13 1.7870 - 1.7399 1.00 3459 141 0.2053 0.2705 REMARK 3 14 1.7399 - 1.6975 0.99 3448 140 0.2127 0.2685 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 3371 REMARK 3 ANGLE : 1.340 4594 REMARK 3 CHIRALITY : 0.057 464 REMARK 3 PLANARITY : 0.007 615 REMARK 3 DIHEDRAL : 13.868 1260 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1559 5.6388 140.2375 REMARK 3 T TENSOR REMARK 3 T11: 0.1305 T22: 0.1200 REMARK 3 T33: 0.1796 T12: -0.0009 REMARK 3 T13: -0.0198 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 0.1506 L22: 0.0065 REMARK 3 L33: 0.1388 L12: 0.0531 REMARK 3 L13: -0.1391 L23: 0.1354 REMARK 3 S TENSOR REMARK 3 S11: 0.0215 S12: -0.0655 S13: -0.1046 REMARK 3 S21: -0.0345 S22: -0.0049 S23: -0.0684 REMARK 3 S31: 0.0375 S32: 0.0349 S33: 0.0042 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5100 6.7669 145.5805 REMARK 3 T TENSOR REMARK 3 T11: 0.0982 T22: 0.0660 REMARK 3 T33: -0.0719 T12: -0.0309 REMARK 3 T13: 0.0082 T23: 0.0940 REMARK 3 L TENSOR REMARK 3 L11: 0.2761 L22: 0.1225 REMARK 3 L33: 0.2554 L12: 0.0626 REMARK 3 L13: -0.0216 L23: 0.0744 REMARK 3 S TENSOR REMARK 3 S11: 0.0144 S12: 0.0226 S13: -0.1161 REMARK 3 S21: 0.1673 S22: -0.1830 S23: 0.3060 REMARK 3 S31: 0.0126 S32: 0.0136 S33: -0.6731 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1976 17.8754 135.1362 REMARK 3 T TENSOR REMARK 3 T11: 0.1253 T22: 0.1001 REMARK 3 T33: 0.1286 T12: -0.0065 REMARK 3 T13: -0.0026 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.1963 L22: 0.1752 REMARK 3 L33: 0.0757 L12: -0.2249 REMARK 3 L13: 0.0085 L23: 0.0050 REMARK 3 S TENSOR REMARK 3 S11: 0.0054 S12: -0.0378 S13: 0.0325 REMARK 3 S21: -0.0521 S22: -0.0037 S23: -0.0414 REMARK 3 S31: -0.0371 S32: -0.0092 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9014 22.2695 143.5383 REMARK 3 T TENSOR REMARK 3 T11: 0.1535 T22: 0.1726 REMARK 3 T33: 0.1748 T12: 0.0167 REMARK 3 T13: 0.0055 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 0.0063 L22: 0.0486 REMARK 3 L33: 0.0063 L12: 0.0119 REMARK 3 L13: -0.0005 L23: -0.0077 REMARK 3 S TENSOR REMARK 3 S11: -0.0665 S12: -0.1753 S13: 0.1583 REMARK 3 S21: -0.0111 S22: -0.0047 S23: 0.0556 REMARK 3 S31: -0.0728 S32: -0.0916 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3066 15.1095 129.3187 REMARK 3 T TENSOR REMARK 3 T11: 0.1403 T22: 0.1700 REMARK 3 T33: 0.1399 T12: -0.0126 REMARK 3 T13: -0.0028 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 0.1390 L22: 0.1263 REMARK 3 L33: 0.0581 L12: -0.0221 REMARK 3 L13: 0.1013 L23: -0.0551 REMARK 3 S TENSOR REMARK 3 S11: -0.0531 S12: -0.0489 S13: -0.0468 REMARK 3 S21: -0.0140 S22: -0.0116 S23: 0.0038 REMARK 3 S31: -0.0280 S32: 0.1442 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 198 THROUGH 276 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0526 16.5473 111.9839 REMARK 3 T TENSOR REMARK 3 T11: 0.1779 T22: 0.1479 REMARK 3 T33: 0.0986 T12: -0.0057 REMARK 3 T13: 0.0167 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.1272 L22: 0.0872 REMARK 3 L33: 0.2799 L12: -0.1807 REMARK 3 L13: -0.1390 L23: -0.0620 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: 0.0164 S13: -0.0172 REMARK 3 S21: 0.0029 S22: -0.0158 S23: -0.0003 REMARK 3 S31: -0.1854 S32: 0.0095 S33: 0.0209 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6460 3.8526 118.9902 REMARK 3 T TENSOR REMARK 3 T11: 0.1593 T22: 0.1900 REMARK 3 T33: 0.1529 T12: -0.0117 REMARK 3 T13: 0.0271 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 0.0051 L22: 0.0549 REMARK 3 L33: 0.0379 L12: 0.0208 REMARK 3 L13: -0.0023 L23: -0.0104 REMARK 3 S TENSOR REMARK 3 S11: -0.0264 S12: 0.0176 S13: -0.0357 REMARK 3 S21: -0.1460 S22: 0.0264 S23: -0.0885 REMARK 3 S31: 0.0706 S32: -0.1046 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.1934 -2.4938 119.6747 REMARK 3 T TENSOR REMARK 3 T11: 0.1216 T22: 0.2797 REMARK 3 T33: 0.5310 T12: 0.0408 REMARK 3 T13: 0.0890 T23: -0.1854 REMARK 3 L TENSOR REMARK 3 L11: 0.0221 L22: 0.0144 REMARK 3 L33: 0.0278 L12: -0.0221 REMARK 3 L13: 0.0056 L23: 0.0010 REMARK 3 S TENSOR REMARK 3 S11: 0.0059 S12: -0.0854 S13: -0.0140 REMARK 3 S21: -0.0290 S22: 0.0867 S23: -0.0884 REMARK 3 S31: -0.0369 S32: 0.0597 S33: 0.0194 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8298 -0.1639 122.5661 REMARK 3 T TENSOR REMARK 3 T11: 0.1347 T22: 0.1668 REMARK 3 T33: 0.2588 T12: 0.0169 REMARK 3 T13: 0.0186 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 0.0048 L22: 0.0167 REMARK 3 L33: 0.0846 L12: 0.0050 REMARK 3 L13: 0.0163 L23: -0.0200 REMARK 3 S TENSOR REMARK 3 S11: 0.0577 S12: -0.0275 S13: -0.1240 REMARK 3 S21: -0.0538 S22: 0.1082 S23: -0.2427 REMARK 3 S31: -0.0350 S32: 0.0987 S33: 0.0160 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5086 -5.1039 122.7491 REMARK 3 T TENSOR REMARK 3 T11: 0.1489 T22: 0.1647 REMARK 3 T33: 0.2526 T12: -0.0188 REMARK 3 T13: 0.0559 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.0168 L22: 0.0171 REMARK 3 L33: 0.1241 L12: 0.0070 REMARK 3 L13: 0.0415 L23: -0.0232 REMARK 3 S TENSOR REMARK 3 S11: -0.0606 S12: 0.0084 S13: -0.1934 REMARK 3 S21: -0.0260 S22: 0.0696 S23: -0.2086 REMARK 3 S31: -0.0206 S32: -0.0990 S33: -0.0166 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2969 -12.1972 124.1966 REMARK 3 T TENSOR REMARK 3 T11: 0.2757 T22: 0.2142 REMARK 3 T33: 0.5030 T12: 0.0141 REMARK 3 T13: 0.0247 T23: 0.0788 REMARK 3 L TENSOR REMARK 3 L11: -0.0006 L22: 0.0069 REMARK 3 L33: -0.0027 L12: 0.0022 REMARK 3 L13: -0.0039 L23: 0.0034 REMARK 3 S TENSOR REMARK 3 S11: -0.0772 S12: -0.1070 S13: -0.2481 REMARK 3 S21: -0.0193 S22: -0.0077 S23: -0.2139 REMARK 3 S31: 0.1204 S32: -0.0464 S33: -0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1039 2.6148 127.3521 REMARK 3 T TENSOR REMARK 3 T11: 0.1243 T22: 0.1637 REMARK 3 T33: 0.1672 T12: -0.0051 REMARK 3 T13: 0.0114 T23: 0.0496 REMARK 3 L TENSOR REMARK 3 L11: 0.0880 L22: 0.0280 REMARK 3 L33: 0.1411 L12: 0.0684 REMARK 3 L13: 0.1056 L23: 0.0565 REMARK 3 S TENSOR REMARK 3 S11: 0.0851 S12: -0.2757 S13: -0.0833 REMARK 3 S21: 0.0323 S22: -0.0520 S23: -0.1785 REMARK 3 S31: -0.1144 S32: 0.0462 S33: -0.0226 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7243 -7.5138 114.9205 REMARK 3 T TENSOR REMARK 3 T11: 0.2152 T22: 0.1888 REMARK 3 T33: 0.3444 T12: -0.0139 REMARK 3 T13: 0.0868 T23: -0.1109 REMARK 3 L TENSOR REMARK 3 L11: 0.0032 L22: 0.0287 REMARK 3 L33: 0.2385 L12: -0.0172 REMARK 3 L13: 0.0227 L23: -0.0278 REMARK 3 S TENSOR REMARK 3 S11: -0.0753 S12: 0.1293 S13: -0.2973 REMARK 3 S21: -0.3143 S22: 0.1125 S23: -0.1969 REMARK 3 S31: 0.1462 S32: -0.1462 S33: 0.0610 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8933 -2.0519 111.6824 REMARK 3 T TENSOR REMARK 3 T11: 0.2444 T22: 0.2821 REMARK 3 T33: 0.2798 T12: -0.0497 REMARK 3 T13: 0.1069 T23: -0.1260 REMARK 3 L TENSOR REMARK 3 L11: 0.0481 L22: 0.0720 REMARK 3 L33: 0.0730 L12: -0.0473 REMARK 3 L13: -0.0225 L23: -0.0145 REMARK 3 S TENSOR REMARK 3 S11: 0.0550 S12: 0.0666 S13: -0.0350 REMARK 3 S21: -0.0757 S22: 0.0494 S23: -0.0353 REMARK 3 S31: -0.0773 S32: 0.0131 S33: 0.0880 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.0158 13.7401 146.4263 REMARK 3 T TENSOR REMARK 3 T11: 0.1217 T22: 0.1638 REMARK 3 T33: 0.1322 T12: -0.0189 REMARK 3 T13: 0.0173 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.0017 L22: -0.0123 REMARK 3 L33: 0.0030 L12: -0.0069 REMARK 3 L13: 0.0050 L23: 0.0069 REMARK 3 S TENSOR REMARK 3 S11: 0.0157 S12: -0.0841 S13: 0.0164 REMARK 3 S21: 0.1092 S22: -0.0644 S23: 0.0475 REMARK 3 S31: 0.0678 S32: -0.0191 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TXS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000224804. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 6.5-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51234 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 0.74400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.830 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1XR8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES (6.5) 20% PEG 6000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.22100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.92350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.09300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.92350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.22100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.09300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 277 REMARK 465 SER A 278 REMARK 465 GLN A 279 REMARK 465 SER A 280 REMARK 465 GLY A 281 REMARK 465 SER A 282 REMARK 465 LEU A 283 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 ILE A 286 REMARK 465 LEU A 287 REMARK 465 ASP A 288 REMARK 465 ALA A 289 REMARK 465 GLN A 290 REMARK 465 LYS A 291 REMARK 465 MET A 292 REMARK 465 VAL A 293 REMARK 465 TRP A 294 REMARK 465 ASN A 295 REMARK 465 HIS A 296 REMARK 465 ARG A 297 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 9 HE21 GLN C 2 1.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 239 NE - CZ - NH1 ANGL. DEV. = 11.2 DEGREES REMARK 500 ARG A 239 NE - CZ - NH2 ANGL. DEV. = -11.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 14 69.82 -155.70 REMARK 500 ASP A 29 -126.32 51.72 REMARK 500 GLN A 224 48.93 -108.70 REMARK 500 ARG A 239 -21.02 93.49 REMARK 500 LYS B 48 54.98 -97.54 REMARK 500 TRP B 60 -5.04 78.91 REMARK 500 ARG C 6 -35.19 -133.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 232 DISTANCE = 6.06 ANGSTROMS DBREF 5TXS A 1 280 UNP P30464 1B15_HUMAN 25 304 DBREF 5TXS B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 5TXS C 1 9 PDB 5TXS 5TXS 1 9 SEQADV 5TXS MET A 0 UNP P30464 INITIATING METHIONINE SEQADV 5TXS GLY A 281 UNP P30464 EXPRESSION TAG SEQADV 5TXS SER A 282 UNP P30464 EXPRESSION TAG SEQADV 5TXS LEU A 283 UNP P30464 EXPRESSION TAG SEQADV 5TXS HIS A 284 UNP P30464 EXPRESSION TAG SEQADV 5TXS HIS A 285 UNP P30464 EXPRESSION TAG SEQADV 5TXS ILE A 286 UNP P30464 EXPRESSION TAG SEQADV 5TXS LEU A 287 UNP P30464 EXPRESSION TAG SEQADV 5TXS ASP A 288 UNP P30464 EXPRESSION TAG SEQADV 5TXS ALA A 289 UNP P30464 EXPRESSION TAG SEQADV 5TXS GLN A 290 UNP P30464 EXPRESSION TAG SEQADV 5TXS LYS A 291 UNP P30464 EXPRESSION TAG SEQADV 5TXS MET A 292 UNP P30464 EXPRESSION TAG SEQADV 5TXS VAL A 293 UNP P30464 EXPRESSION TAG SEQADV 5TXS TRP A 294 UNP P30464 EXPRESSION TAG SEQADV 5TXS ASN A 295 UNP P30464 EXPRESSION TAG SEQADV 5TXS HIS A 296 UNP P30464 EXPRESSION TAG SEQADV 5TXS ARG A 297 UNP P30464 EXPRESSION TAG SEQADV 5TXS MET B 0 UNP P61769 INITIATING METHIONINE SEQRES 1 A 298 MET GLY SER HIS SER MET ARG TYR PHE TYR THR ALA MET SEQRES 2 A 298 SER ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL SEQRES 3 A 298 GLY TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER SEQRES 4 A 298 ASP ALA ALA SER PRO ARG MET ALA PRO ARG ALA PRO TRP SEQRES 5 A 298 ILE GLU GLN GLU GLY PRO GLU TYR TRP ASP ARG GLU THR SEQRES 6 A 298 GLN ILE SER LYS THR ASN THR GLN THR TYR ARG GLU SER SEQRES 7 A 298 LEU ARG ASN LEU ARG GLY TYR TYR ASN GLN SER GLU ALA SEQRES 8 A 298 GLY SER HIS THR LEU GLN ARG MET TYR GLY CYS ASP VAL SEQRES 9 A 298 GLY PRO ASP GLY ARG LEU LEU ARG GLY HIS ASP GLN SER SEQRES 10 A 298 ALA TYR ASP GLY LYS ASP TYR ILE ALA LEU ASN GLU ASP SEQRES 11 A 298 LEU SER SER TRP THR ALA ALA ASP THR ALA ALA GLN ILE SEQRES 12 A 298 THR GLN ARG LYS TRP GLU ALA ALA ARG GLU ALA GLU GLN SEQRES 13 A 298 TRP ARG ALA TYR LEU GLU GLY LEU CYS VAL GLU TRP LEU SEQRES 14 A 298 ARG ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG SEQRES 15 A 298 ALA ASP PRO PRO LYS THR HIS VAL THR HIS HIS PRO ILE SEQRES 16 A 298 SER ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY SEQRES 17 A 298 PHE TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP SEQRES 18 A 298 GLY GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR SEQRES 19 A 298 ARG PRO ALA GLY ASP ARG THR PHE GLN LYS TRP ALA ALA SEQRES 20 A 298 VAL VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS SEQRES 21 A 298 HIS VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU SEQRES 22 A 298 ARG TRP GLU PRO SER SER GLN SER GLY SER LEU HIS HIS SEQRES 23 A 298 ILE LEU ASP ALA GLN LYS MET VAL TRP ASN HIS ARG SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 9 ALA GLN ASP ILE TYR ARG ALA SER TYR FORMUL 4 HOH *544(H2 O) HELIX 1 AA1 ALA A 49 GLU A 53 5 5 HELIX 2 AA2 GLY A 56 TYR A 85 1 30 HELIX 3 AA3 ASP A 137 ALA A 150 1 14 HELIX 4 AA4 ARG A 151 GLY A 162 1 12 HELIX 5 AA5 GLY A 162 GLY A 175 1 14 HELIX 6 AA6 GLY A 175 GLN A 180 1 6 HELIX 7 AA7 THR A 225 THR A 228 5 4 HELIX 8 AA8 GLU A 253 GLN A 255 5 3 SHEET 1 AA1 8 ALA A 46 PRO A 47 0 SHEET 2 AA1 8 THR A 31 ASP A 37 -1 N ARG A 35 O ALA A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N GLY A 26 O PHE A 33 SHEET 4 AA1 8 HIS A 3 MET A 12 -1 N PHE A 8 O VAL A 25 SHEET 5 AA1 8 THR A 94 VAL A 103 -1 O ARG A 97 N TYR A 9 SHEET 6 AA1 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 AA1 8 LYS A 121 LEU A 126 -1 O LEU A 126 N ASP A 114 SHEET 8 AA1 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 PRO A 193 0 SHEET 2 AA2 4 GLU A 198 PHE A 208 -1 O LEU A 206 N LYS A 186 SHEET 3 AA2 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA2 4 GLU A 229 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 AA3 4 LYS A 186 PRO A 193 0 SHEET 2 AA3 4 GLU A 198 PHE A 208 -1 O LEU A 206 N LYS A 186 SHEET 3 AA3 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA3 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA4 4 GLU A 222 ASP A 223 0 SHEET 2 AA4 4 THR A 214 ARG A 219 -1 N ARG A 219 O GLU A 222 SHEET 3 AA4 4 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 4 AA4 4 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.11 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.02 CISPEP 1 TYR A 209 PRO A 210 0 3.57 CISPEP 2 HIS B 31 PRO B 32 0 2.55 CRYST1 50.442 82.186 109.847 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019825 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012168 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009104 0.00000