HEADER HYDROLASE 22-NOV-16 5TZO TITLE COMPUTATIONALLY DESIGNED FENTANYL BINDER - FEN49*-COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDO-1,4-BETA-XYLANASE A; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 30-213; COMPND 5 SYNONYM: XYLANASE A,1,4-BETA-D-XYLAN XYLANOHYDROLASE A; COMPND 6 EC: 3.2.1.8; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS (STRAIN 168); SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: XYNA, BSU18840; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPUTATIONAL DESIGN, FENTANYL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.J.BICK,P.J.GREISEN,K.J.MOREY,M.S.ANTUNES,D.LA,B.SANKARAN,L.REYMOND, AUTHOR 2 K.JOHNSSON,J.I.MEDFORD,D.BAKER REVDAT 4 06-MAR-24 5TZO 1 LINK REVDAT 3 01-JAN-20 5TZO 1 REMARK REVDAT 2 04-DEC-19 5TZO 1 REMARK REVDAT 1 04-OCT-17 5TZO 0 JRNL AUTH M.J.BICK,P.J.GREISEN,K.J.MOREY,M.S.ANTUNES,D.LA,B.SANKARAN, JRNL AUTH 2 L.REYMOND,K.JOHNSSON,J.I.MEDFORD,D.BAKER JRNL TITL COMPUTATIONAL DESIGN OF ENVIRONMENTAL SENSORS FOR THE POTENT JRNL TITL 2 OPIOID FENTANYL. JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28925919 JRNL DOI 10.7554/ELIFE.28909 REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2463 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 65179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3322 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.8975 - 4.8160 1.00 2819 164 0.1836 0.2144 REMARK 3 2 4.8160 - 3.8229 0.98 2657 132 0.1233 0.1492 REMARK 3 3 3.8229 - 3.3398 0.97 2596 123 0.1277 0.1508 REMARK 3 4 3.3398 - 3.0345 0.99 2612 154 0.1242 0.1474 REMARK 3 5 3.0345 - 2.8170 0.99 2601 144 0.1280 0.1577 REMARK 3 6 2.8170 - 2.6509 0.98 2610 126 0.1389 0.1884 REMARK 3 7 2.6509 - 2.5182 0.99 2585 152 0.1342 0.1714 REMARK 3 8 2.5182 - 2.4085 0.99 2592 157 0.1418 0.1816 REMARK 3 9 2.4085 - 2.3158 1.00 2587 138 0.1424 0.1716 REMARK 3 10 2.3158 - 2.2359 0.95 2469 119 0.2044 0.2384 REMARK 3 11 2.2359 - 2.1660 0.98 2538 137 0.1598 0.2036 REMARK 3 12 2.1660 - 2.1041 1.00 2591 159 0.1508 0.1766 REMARK 3 13 2.1041 - 2.0487 0.95 2493 111 0.2224 0.3140 REMARK 3 14 2.0487 - 1.9987 0.99 2581 137 0.1642 0.2110 REMARK 3 15 1.9987 - 1.9533 1.00 2592 131 0.1726 0.2022 REMARK 3 16 1.9533 - 1.9117 0.95 2459 124 0.3061 0.4004 REMARK 3 17 1.9117 - 1.8735 0.96 2448 127 0.2545 0.2991 REMARK 3 18 1.8735 - 1.8381 1.00 2604 141 0.2023 0.2177 REMARK 3 19 1.8381 - 1.8053 1.00 2539 150 0.1956 0.2547 REMARK 3 20 1.8053 - 1.7747 1.00 2581 146 0.2053 0.2759 REMARK 3 21 1.7747 - 1.7460 1.00 2574 126 0.2173 0.2460 REMARK 3 22 1.7460 - 1.7192 1.00 2595 141 0.2343 0.2761 REMARK 3 23 1.7192 - 1.6939 1.00 2559 147 0.2494 0.3063 REMARK 3 24 1.6939 - 1.6700 1.00 2575 136 0.2600 0.3135 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4737 REMARK 3 ANGLE : 0.842 6532 REMARK 3 CHIRALITY : 0.116 664 REMARK 3 PLANARITY : 0.005 834 REMARK 3 DIHEDRAL : 16.050 2564 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6908 -5.7094 -3.2111 REMARK 3 T TENSOR REMARK 3 T11: 0.1428 T22: 0.1035 REMARK 3 T33: 0.0915 T12: 0.0042 REMARK 3 T13: 0.0099 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.2129 L22: 1.3998 REMARK 3 L33: 2.5550 L12: -0.5068 REMARK 3 L13: 0.5442 L23: 0.0268 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.0698 S13: -0.0245 REMARK 3 S21: -0.0257 S22: -0.0795 S23: 0.1135 REMARK 3 S31: 0.3831 S32: -0.0174 S33: 0.0512 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5749 8.4550 -7.1369 REMARK 3 T TENSOR REMARK 3 T11: 0.1200 T22: 0.1323 REMARK 3 T33: 0.0981 T12: 0.0226 REMARK 3 T13: 0.0032 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.2646 L22: 0.9646 REMARK 3 L33: 0.8296 L12: -0.3111 REMARK 3 L13: 0.4420 L23: -0.7560 REMARK 3 S TENSOR REMARK 3 S11: -0.0211 S12: 0.0152 S13: 0.0471 REMARK 3 S21: 0.0797 S22: -0.0447 S23: -0.0638 REMARK 3 S31: -0.1071 S32: 0.0059 S33: 0.0541 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3778 15.9142 -11.7882 REMARK 3 T TENSOR REMARK 3 T11: 0.1420 T22: 0.1044 REMARK 3 T33: 0.1046 T12: 0.0305 REMARK 3 T13: -0.0077 T23: 0.0357 REMARK 3 L TENSOR REMARK 3 L11: 3.6371 L22: 0.7713 REMARK 3 L33: 2.3695 L12: -0.8555 REMARK 3 L13: -1.3381 L23: 0.2770 REMARK 3 S TENSOR REMARK 3 S11: -0.1871 S12: -0.1569 S13: -0.1078 REMARK 3 S21: 0.0729 S22: 0.0137 S23: -0.0369 REMARK 3 S31: -0.0435 S32: -0.0745 S33: 0.1425 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.4308 7.5388 0.4017 REMARK 3 T TENSOR REMARK 3 T11: 0.1824 T22: 0.4114 REMARK 3 T33: 0.1901 T12: -0.0444 REMARK 3 T13: 0.0335 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 4.0016 L22: 4.2753 REMARK 3 L33: 2.9377 L12: -0.4502 REMARK 3 L13: 0.8044 L23: 0.1214 REMARK 3 S TENSOR REMARK 3 S11: -0.0943 S12: -0.0793 S13: -0.2483 REMARK 3 S21: -0.0241 S22: 0.3358 S23: 0.5474 REMARK 3 S31: 0.1926 S32: -0.6216 S33: -0.1817 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0605 9.9698 -6.8564 REMARK 3 T TENSOR REMARK 3 T11: 0.1046 T22: 0.1249 REMARK 3 T33: 0.0900 T12: 0.0266 REMARK 3 T13: -0.0031 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 0.5445 L22: 1.3626 REMARK 3 L33: 1.2855 L12: -0.0640 REMARK 3 L13: 0.1523 L23: -0.3503 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: -0.0129 S13: 0.0886 REMARK 3 S21: 0.0680 S22: -0.0248 S23: -0.0864 REMARK 3 S31: -0.1354 S32: 0.0294 S33: 0.0784 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.8764 -22.2543 19.3930 REMARK 3 T TENSOR REMARK 3 T11: 0.1099 T22: 0.1153 REMARK 3 T33: 0.0921 T12: -0.0289 REMARK 3 T13: -0.0082 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 1.0693 L22: 1.8847 REMARK 3 L33: 1.7314 L12: 0.3439 REMARK 3 L13: -0.1823 L23: -0.2231 REMARK 3 S TENSOR REMARK 3 S11: -0.1287 S12: 0.1493 S13: -0.0157 REMARK 3 S21: -0.1616 S22: 0.1148 S23: 0.1114 REMARK 3 S31: -0.0884 S32: -0.1268 S33: 0.0325 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 35 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.7489 -17.7228 18.7817 REMARK 3 T TENSOR REMARK 3 T11: 0.1021 T22: 0.1000 REMARK 3 T33: 0.0761 T12: -0.0144 REMARK 3 T13: 0.0010 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.8793 L22: 0.6839 REMARK 3 L33: 0.5456 L12: 0.4508 REMARK 3 L13: -0.3601 L23: -0.1798 REMARK 3 S TENSOR REMARK 3 S11: -0.0734 S12: 0.1765 S13: -0.0553 REMARK 3 S21: -0.1106 S22: 0.0709 S23: 0.0038 REMARK 3 S31: 0.0539 S32: -0.0602 S33: 0.0050 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 86 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3877 -11.0551 8.0893 REMARK 3 T TENSOR REMARK 3 T11: 0.1479 T22: 0.1160 REMARK 3 T33: 0.0740 T12: 0.0016 REMARK 3 T13: 0.0120 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.4224 L22: 1.4044 REMARK 3 L33: 0.2933 L12: -0.1169 REMARK 3 L13: -0.0825 L23: -0.2937 REMARK 3 S TENSOR REMARK 3 S11: -0.0611 S12: 0.0661 S13: 0.0385 REMARK 3 S21: -0.1683 S22: 0.0707 S23: -0.1091 REMARK 3 S31: 0.1040 S32: -0.1565 S33: -0.0072 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 103 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.4992 -8.5656 12.1773 REMARK 3 T TENSOR REMARK 3 T11: 0.0950 T22: 0.1084 REMARK 3 T33: 0.0916 T12: -0.0107 REMARK 3 T13: 0.0165 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.8474 L22: 2.6386 REMARK 3 L33: 1.3290 L12: -1.3351 REMARK 3 L13: -0.5839 L23: 1.1133 REMARK 3 S TENSOR REMARK 3 S11: 0.1133 S12: 0.1071 S13: -0.0634 REMARK 3 S21: -0.2311 S22: -0.0946 S23: 0.0043 REMARK 3 S31: -0.0757 S32: -0.1554 S33: -0.0393 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 113 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.6878 -2.2066 23.9449 REMARK 3 T TENSOR REMARK 3 T11: 0.1039 T22: 0.1809 REMARK 3 T33: 0.2149 T12: 0.0087 REMARK 3 T13: 0.0307 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 2.4812 L22: 3.7370 REMARK 3 L33: 4.7999 L12: 0.3275 REMARK 3 L13: -0.1981 L23: -2.1197 REMARK 3 S TENSOR REMARK 3 S11: -0.0581 S12: 0.1164 S13: 0.2334 REMARK 3 S21: 0.1980 S22: 0.0887 S23: 0.4964 REMARK 3 S31: -0.1230 S32: -0.5522 S33: 0.0221 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 125 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.1772 -16.6486 11.7988 REMARK 3 T TENSOR REMARK 3 T11: 0.1335 T22: 0.1247 REMARK 3 T33: 0.0957 T12: -0.0361 REMARK 3 T13: 0.0357 T23: -0.0257 REMARK 3 L TENSOR REMARK 3 L11: 0.3359 L22: 0.8453 REMARK 3 L33: 0.4856 L12: 0.1580 REMARK 3 L13: -0.0024 L23: 0.0355 REMARK 3 S TENSOR REMARK 3 S11: -0.1237 S12: 0.1190 S13: -0.1040 REMARK 3 S21: -0.0705 S22: 0.0346 S23: 0.0536 REMARK 3 S31: 0.1680 S32: -0.0761 S33: 0.0599 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 142 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9507 -14.9912 19.0639 REMARK 3 T TENSOR REMARK 3 T11: 0.0842 T22: 0.0870 REMARK 3 T33: 0.0895 T12: 0.0077 REMARK 3 T13: 0.0094 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.3094 L22: 3.4797 REMARK 3 L33: 0.9108 L12: 0.6275 REMARK 3 L13: -0.5053 L23: -0.7398 REMARK 3 S TENSOR REMARK 3 S11: -0.0460 S12: 0.0201 S13: -0.1496 REMARK 3 S21: -0.1318 S22: -0.0804 S23: -0.2819 REMARK 3 S31: 0.0451 S32: -0.0269 S33: 0.1148 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 157 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0098 -18.0441 18.1895 REMARK 3 T TENSOR REMARK 3 T11: 0.1192 T22: 0.1214 REMARK 3 T33: 0.0899 T12: -0.0224 REMARK 3 T13: -0.0036 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.8158 L22: 1.0563 REMARK 3 L33: 0.4446 L12: 0.7463 REMARK 3 L13: -0.0345 L23: 0.0633 REMARK 3 S TENSOR REMARK 3 S11: -0.0851 S12: 0.1528 S13: -0.0376 REMARK 3 S21: -0.1607 S22: 0.0994 S23: -0.0284 REMARK 3 S31: -0.0172 S32: -0.0644 S33: 0.0150 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7611 20.8747 26.9459 REMARK 3 T TENSOR REMARK 3 T11: 0.1161 T22: 0.0811 REMARK 3 T33: 0.1078 T12: -0.0212 REMARK 3 T13: -0.0115 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.2398 L22: 0.8282 REMARK 3 L33: 1.6147 L12: -0.3461 REMARK 3 L13: -0.0322 L23: 0.2836 REMARK 3 S TENSOR REMARK 3 S11: -0.0789 S12: 0.0242 S13: 0.0676 REMARK 3 S21: -0.0179 S22: -0.0396 S23: -0.0026 REMARK 3 S31: -0.1191 S32: -0.0314 S33: 0.1099 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1282 13.3369 28.0139 REMARK 3 T TENSOR REMARK 3 T11: 0.1017 T22: 0.0791 REMARK 3 T33: 0.0882 T12: -0.0029 REMARK 3 T13: -0.0125 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.8130 L22: 0.5340 REMARK 3 L33: 0.4959 L12: 0.2722 REMARK 3 L13: -0.0877 L23: 0.2579 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: -0.0076 S13: -0.0024 REMARK 3 S21: -0.0151 S22: 0.0309 S23: -0.0499 REMARK 3 S31: -0.0529 S32: 0.0028 S33: -0.0102 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 86 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5573 10.9009 36.5757 REMARK 3 T TENSOR REMARK 3 T11: 0.0888 T22: 0.0890 REMARK 3 T33: 0.0922 T12: 0.0127 REMARK 3 T13: 0.0006 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.7004 L22: 0.9744 REMARK 3 L33: 0.5354 L12: -0.0678 REMARK 3 L13: -0.1678 L23: 0.1730 REMARK 3 S TENSOR REMARK 3 S11: 0.0500 S12: -0.0641 S13: 0.0506 REMARK 3 S21: -0.0311 S22: -0.0277 S23: 0.0863 REMARK 3 S31: -0.0961 S32: -0.0131 S33: -0.0198 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 113 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.0687 27.1586 22.2873 REMARK 3 T TENSOR REMARK 3 T11: 0.4312 T22: 0.1482 REMARK 3 T33: 0.3011 T12: 0.0501 REMARK 3 T13: 0.0281 T23: 0.0689 REMARK 3 L TENSOR REMARK 3 L11: 0.8723 L22: 0.5863 REMARK 3 L33: 0.0320 L12: -0.3149 REMARK 3 L13: 0.1461 L23: 0.0068 REMARK 3 S TENSOR REMARK 3 S11: 0.0899 S12: -0.0147 S13: 0.3447 REMARK 3 S21: 0.3258 S22: 0.1228 S23: 0.4198 REMARK 3 S31: -0.4840 S32: -0.1635 S33: 0.0735 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 125 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2168 10.3091 29.6837 REMARK 3 T TENSOR REMARK 3 T11: 0.0817 T22: 0.0712 REMARK 3 T33: 0.0713 T12: 0.0069 REMARK 3 T13: -0.0098 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.1228 L22: 0.6579 REMARK 3 L33: 0.4916 L12: 0.3602 REMARK 3 L13: -0.0732 L23: 0.2766 REMARK 3 S TENSOR REMARK 3 S11: -0.0565 S12: -0.0680 S13: -0.0219 REMARK 3 S21: -0.0071 S22: 0.0337 S23: -0.0198 REMARK 3 S31: -0.0280 S32: 0.0028 S33: 0.0339 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ITERATIVE ROUNDS OF MODEL BUILDING IN REMARK 3 COOT AND REFINEMENT IN PHENIX. REFINEMENT PARAMETERS INCLUDED REMARK 3 REAL AND RECIPROCAL SPACE, INDIVIDUAL ADPS, OCCUPANICES, REMARK 3 OPTIMIZATION OF X-RAY TO STEREOCHEMICAL AND X-RAY TO ADP REMARK 3 WEIGHTS. HYDROGENS WERE ADDED AUTOMATICALLY AND AUTOMATIC REMARK 3 CORRECTION OF N/Q/H ERRORS WAS USED. UPDATED SOLVENT MODEL WAS REMARK 3 USED IN THE PENULTIMATE ROUND OF REFINEMENT. MANUAL MODELING OF REMARK 3 SOLVENT WAS CONDUCTED BEFORE THE FINAL ROUND OF REFINEMENT. REMARK 4 REMARK 4 5TZO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000225079. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999878 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65282 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 51.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.69000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER 2.5.6. REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: ROD-LIKE CRYSTALS WITH LONGEST DIMENSION OF APPROXIMATELY REMARK 200 200 MICRONS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8M SODIUM PHOSPHATE, 0.8M POTASSIUM REMARK 280 PHOSPHATE, 0.1M HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.03500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.32000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.62500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.32000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.03500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.62500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 HIS A 0 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 HIS B 0 REMARK 465 GLY C -2 REMARK 465 PRO C -1 REMARK 465 HIS C 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 99 CD CE NZ REMARK 470 ASN A 114 CG OD1 ND2 REMARK 470 ARG A 122 CD NE CZ NH1 NH2 REMARK 470 LYS A 154 CD CE NZ REMARK 470 LYS B 99 CE NZ REMARK 470 MET C 1 CG SD CE REMARK 470 LYS C 99 CE NZ REMARK 470 ASP C 121 OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 313 O HOH B 472 1.93 REMARK 500 O HOH A 444 O HOH A 473 1.94 REMARK 500 O HOH B 461 O HOH B 514 1.96 REMARK 500 O HOH A 474 O HOH A 516 1.99 REMARK 500 O HOH C 301 O HOH C 367 2.02 REMARK 500 O HOH B 308 O HOH C 377 2.03 REMARK 500 O HOH C 408 O HOH C 528 2.06 REMARK 500 O HOH A 416 O HOH A 450 2.08 REMARK 500 O HOH C 533 O HOH C 561 2.08 REMARK 500 O HOH C 327 O HOH C 488 2.09 REMARK 500 O HOH C 389 O HOH C 401 2.10 REMARK 500 O HOH B 481 O HOH C 522 2.12 REMARK 500 O HOH A 431 O HOH A 437 2.13 REMARK 500 O HOH B 305 O HOH B 481 2.13 REMARK 500 O HOH B 314 O HOH B 377 2.13 REMARK 500 O HOH A 409 O HOH A 500 2.14 REMARK 500 O HOH A 481 O HOH A 484 2.14 REMARK 500 O HOH B 360 O HOH B 503 2.14 REMARK 500 O HOH C 515 O HOH C 517 2.14 REMARK 500 OG SER C 27 O HOH C 301 2.15 REMARK 500 O HIS A 156 O HOH A 301 2.15 REMARK 500 O HOH A 301 O HOH A 471 2.15 REMARK 500 O HOH C 357 O HOH C 509 2.15 REMARK 500 O HOH A 481 O HOH B 500 2.15 REMARK 500 O HOH C 403 O HOH C 514 2.15 REMARK 500 O HOH C 494 O HOH C 525 2.16 REMARK 500 O HOH C 353 O HOH C 463 2.16 REMARK 500 O HOH C 383 O HOH C 395 2.16 REMARK 500 O HOH A 371 O HOH A 451 2.17 REMARK 500 O HOH A 345 O HOH A 466 2.17 REMARK 500 O HOH C 322 O HOH C 459 2.18 REMARK 500 O HOH C 526 O HOH C 552 2.18 REMARK 500 OH TYR B 80 O HOH B 301 2.18 REMARK 500 O HOH A 326 O HOH A 482 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 427 O HOH C 328 2454 2.13 REMARK 500 O HOH A 307 O HOH B 314 4545 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 37 CG1 - CB - CG2 ANGL. DEV. = 12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 4 20.98 -145.32 REMARK 500 ALA A 88 108.15 -160.21 REMARK 500 ALA A 165 -152.13 -98.42 REMARK 500 ASP B 4 27.30 -147.15 REMARK 500 ALA B 165 -157.12 -99.70 REMARK 500 ASP C 4 27.06 -145.86 REMARK 500 ALA C 165 -150.13 -102.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 565 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH C 566 DISTANCE = 6.25 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 7V7 B 202 REMARK 610 7V7 C 202 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 203 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 20 O REMARK 620 2 ASN A 20 OD1 66.1 REMARK 620 3 GLY A 21 O 75.6 65.1 REMARK 620 4 TYR B 94 OH 151.5 88.2 82.6 REMARK 620 5 ASP B 106 OD1 96.8 99.5 164.4 99.7 REMARK 620 6 HOH B 435 O 91.8 148.0 87.7 105.5 106.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 204 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 94 OH REMARK 620 2 ASP A 106 OD1 98.2 REMARK 620 3 HOH A 449 O 104.9 104.6 REMARK 620 4 ASN C 20 O 70.3 47.0 76.3 REMARK 620 5 ASN C 20 OD1 70.4 45.2 78.1 2.1 REMARK 620 6 GLY C 21 O 73.0 43.4 77.7 3.7 2.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 204 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 20 O REMARK 620 2 ASN B 20 OD1 66.2 REMARK 620 3 GLY B 21 O 75.3 65.1 REMARK 620 4 TYR C 94 OH 97.6 37.5 91.9 REMARK 620 5 ASP C 106 OD1 98.9 36.6 88.1 4.5 REMARK 620 6 HOH C 466 O 84.1 142.8 86.7 177.5 173.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7V7 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7V7 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7V7 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7V7 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7V7 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7V7 C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TVV RELATED DB: PDB REMARK 900 RELATED ID: 5TVY RELATED DB: PDB DBREF 5TZO A 2 185 UNP P18429 XYNA_BACSU 30 213 DBREF 5TZO B 2 185 UNP P18429 XYNA_BACSU 30 213 DBREF 5TZO C 2 185 UNP P18429 XYNA_BACSU 30 213 SEQADV 5TZO GLY A -2 UNP P18429 EXPRESSION TAG SEQADV 5TZO PRO A -1 UNP P18429 EXPRESSION TAG SEQADV 5TZO HIS A 0 UNP P18429 EXPRESSION TAG SEQADV 5TZO MET A 1 UNP P18429 EXPRESSION TAG SEQADV 5TZO LEU A 7 UNP P18429 GLN 35 CONFLICT SEQADV 5TZO PHE A 9 UNP P18429 TRP 37 CONFLICT SEQADV 5TZO SER A 35 UNP P18429 ASN 63 CONFLICT SEQADV 5TZO TRP A 63 UNP P18429 ASN 91 CONFLICT SEQADV 5TZO ALA A 65 UNP P18429 TYR 93 CONFLICT SEQADV 5TZO ALA A 67 UNP P18429 THR 95 CONFLICT SEQADV 5TZO VAL A 69 UNP P18429 TYR 97 CONFLICT SEQADV 5TZO ALA A 78 UNP P18429 GLU 106 CONFLICT SEQADV 5TZO ALA A 88 UNP P18429 TYR 116 CONFLICT SEQADV 5TZO TRP A 90 UNP P18429 PRO 118 CONFLICT SEQADV 5TZO ALA A 172 UNP P18429 GLU 200 CONFLICT SEQADV 5TZO GLY B -2 UNP P18429 EXPRESSION TAG SEQADV 5TZO PRO B -1 UNP P18429 EXPRESSION TAG SEQADV 5TZO HIS B 0 UNP P18429 EXPRESSION TAG SEQADV 5TZO MET B 1 UNP P18429 EXPRESSION TAG SEQADV 5TZO LEU B 7 UNP P18429 GLN 35 CONFLICT SEQADV 5TZO PHE B 9 UNP P18429 TRP 37 CONFLICT SEQADV 5TZO SER B 35 UNP P18429 ASN 63 CONFLICT SEQADV 5TZO TRP B 63 UNP P18429 ASN 91 CONFLICT SEQADV 5TZO ALA B 65 UNP P18429 TYR 93 CONFLICT SEQADV 5TZO ALA B 67 UNP P18429 THR 95 CONFLICT SEQADV 5TZO VAL B 69 UNP P18429 TYR 97 CONFLICT SEQADV 5TZO ALA B 78 UNP P18429 GLU 106 CONFLICT SEQADV 5TZO ALA B 88 UNP P18429 TYR 116 CONFLICT SEQADV 5TZO TRP B 90 UNP P18429 PRO 118 CONFLICT SEQADV 5TZO ALA B 172 UNP P18429 GLU 200 CONFLICT SEQADV 5TZO GLY C -2 UNP P18429 EXPRESSION TAG SEQADV 5TZO PRO C -1 UNP P18429 EXPRESSION TAG SEQADV 5TZO HIS C 0 UNP P18429 EXPRESSION TAG SEQADV 5TZO MET C 1 UNP P18429 EXPRESSION TAG SEQADV 5TZO LEU C 7 UNP P18429 GLN 35 CONFLICT SEQADV 5TZO PHE C 9 UNP P18429 TRP 37 CONFLICT SEQADV 5TZO SER C 35 UNP P18429 ASN 63 CONFLICT SEQADV 5TZO TRP C 63 UNP P18429 ASN 91 CONFLICT SEQADV 5TZO ALA C 65 UNP P18429 TYR 93 CONFLICT SEQADV 5TZO ALA C 67 UNP P18429 THR 95 CONFLICT SEQADV 5TZO VAL C 69 UNP P18429 TYR 97 CONFLICT SEQADV 5TZO ALA C 78 UNP P18429 GLU 106 CONFLICT SEQADV 5TZO ALA C 88 UNP P18429 TYR 116 CONFLICT SEQADV 5TZO TRP C 90 UNP P18429 PRO 118 CONFLICT SEQADV 5TZO ALA C 172 UNP P18429 GLU 200 CONFLICT SEQRES 1 A 188 GLY PRO HIS MET SER THR ASP TYR TRP LEU ASN PHE THR SEQRES 2 A 188 ASP GLY GLY GLY ILE VAL ASN ALA VAL ASN GLY SER GLY SEQRES 3 A 188 GLY ASN TYR SER VAL ASN TRP SER ASN THR GLY SER PHE SEQRES 4 A 188 VAL VAL GLY LYS GLY TRP THR THR GLY SER PRO PHE ARG SEQRES 5 A 188 THR ILE ASN TYR ASN ALA GLY VAL TRP ALA PRO ASN GLY SEQRES 6 A 188 TRP GLY ALA LEU ALA LEU VAL GLY TRP THR ARG SER PRO SEQRES 7 A 188 LEU ILE ALA TYR TYR VAL VAL ASP SER TRP GLY THR ALA SEQRES 8 A 188 ARG TRP THR GLY THR TYR LYS GLY THR VAL LYS SER ASP SEQRES 9 A 188 GLY GLY THR TYR ASP ILE TYR THR THR THR ARG TYR ASN SEQRES 10 A 188 ALA PRO SER ILE ASP GLY ASP ARG THR THR PHE THR GLN SEQRES 11 A 188 TYR TRP SER VAL ARG GLN SER LYS ARG PRO THR GLY SER SEQRES 12 A 188 ASN ALA THR ILE THR PHE SER ASN HIS VAL ASN ALA TRP SEQRES 13 A 188 LYS SER HIS GLY MET ASN LEU GLY SER ASN TRP ALA TYR SEQRES 14 A 188 GLN VAL MET ALA THR ALA GLY TYR GLN SER SER GLY SER SEQRES 15 A 188 SER ASN VAL THR VAL TRP SEQRES 1 B 188 GLY PRO HIS MET SER THR ASP TYR TRP LEU ASN PHE THR SEQRES 2 B 188 ASP GLY GLY GLY ILE VAL ASN ALA VAL ASN GLY SER GLY SEQRES 3 B 188 GLY ASN TYR SER VAL ASN TRP SER ASN THR GLY SER PHE SEQRES 4 B 188 VAL VAL GLY LYS GLY TRP THR THR GLY SER PRO PHE ARG SEQRES 5 B 188 THR ILE ASN TYR ASN ALA GLY VAL TRP ALA PRO ASN GLY SEQRES 6 B 188 TRP GLY ALA LEU ALA LEU VAL GLY TRP THR ARG SER PRO SEQRES 7 B 188 LEU ILE ALA TYR TYR VAL VAL ASP SER TRP GLY THR ALA SEQRES 8 B 188 ARG TRP THR GLY THR TYR LYS GLY THR VAL LYS SER ASP SEQRES 9 B 188 GLY GLY THR TYR ASP ILE TYR THR THR THR ARG TYR ASN SEQRES 10 B 188 ALA PRO SER ILE ASP GLY ASP ARG THR THR PHE THR GLN SEQRES 11 B 188 TYR TRP SER VAL ARG GLN SER LYS ARG PRO THR GLY SER SEQRES 12 B 188 ASN ALA THR ILE THR PHE SER ASN HIS VAL ASN ALA TRP SEQRES 13 B 188 LYS SER HIS GLY MET ASN LEU GLY SER ASN TRP ALA TYR SEQRES 14 B 188 GLN VAL MET ALA THR ALA GLY TYR GLN SER SER GLY SER SEQRES 15 B 188 SER ASN VAL THR VAL TRP SEQRES 1 C 188 GLY PRO HIS MET SER THR ASP TYR TRP LEU ASN PHE THR SEQRES 2 C 188 ASP GLY GLY GLY ILE VAL ASN ALA VAL ASN GLY SER GLY SEQRES 3 C 188 GLY ASN TYR SER VAL ASN TRP SER ASN THR GLY SER PHE SEQRES 4 C 188 VAL VAL GLY LYS GLY TRP THR THR GLY SER PRO PHE ARG SEQRES 5 C 188 THR ILE ASN TYR ASN ALA GLY VAL TRP ALA PRO ASN GLY SEQRES 6 C 188 TRP GLY ALA LEU ALA LEU VAL GLY TRP THR ARG SER PRO SEQRES 7 C 188 LEU ILE ALA TYR TYR VAL VAL ASP SER TRP GLY THR ALA SEQRES 8 C 188 ARG TRP THR GLY THR TYR LYS GLY THR VAL LYS SER ASP SEQRES 9 C 188 GLY GLY THR TYR ASP ILE TYR THR THR THR ARG TYR ASN SEQRES 10 C 188 ALA PRO SER ILE ASP GLY ASP ARG THR THR PHE THR GLN SEQRES 11 C 188 TYR TRP SER VAL ARG GLN SER LYS ARG PRO THR GLY SER SEQRES 12 C 188 ASN ALA THR ILE THR PHE SER ASN HIS VAL ASN ALA TRP SEQRES 13 C 188 LYS SER HIS GLY MET ASN LEU GLY SER ASN TRP ALA TYR SEQRES 14 C 188 GLN VAL MET ALA THR ALA GLY TYR GLN SER SER GLY SER SEQRES 15 C 188 SER ASN VAL THR VAL TRP HET 7V7 A 201 53 HET 7V7 A 202 53 HET K A 203 1 HET K A 204 1 HET CL A 205 1 HET 7V7 B 201 53 HET 7V7 B 202 39 HET CL B 203 1 HET K B 204 1 HET 7V7 C 201 53 HET 7V7 C 202 42 HET CL C 203 1 HETNAM 7V7 N-PHENYL-N-[1-(2-PHENYLETHYL)PIPERIDIN-4-YL]PROPANAMIDE HETNAM K POTASSIUM ION HETNAM CL CHLORIDE ION FORMUL 4 7V7 6(C22 H28 N2 O) FORMUL 6 K 3(K 1+) FORMUL 8 CL 3(CL 1-) FORMUL 16 HOH *714(H2 O) HELIX 1 AA1 PHE A 146 HIS A 156 1 11 HELIX 2 AA2 PHE B 146 HIS B 156 1 11 HELIX 3 AA3 PHE C 146 HIS C 156 1 11 SHEET 1 AA113 ILE A 15 ASN A 20 0 SHEET 2 AA113 ASN A 25 SER A 31 -1 O SER A 27 N VAL A 19 SHEET 3 AA113 ASN A 163 TRP A 185 -1 O SER A 180 N VAL A 28 SHEET 4 AA113 SER A 35 TRP A 42 -1 N TRP A 42 O GLN A 167 SHEET 5 AA113 TYR A 5 THR A 10 -1 N LEU A 7 O GLY A 39 SHEET 6 AA113 GLY B 92 SER B 100 -1 O GLY B 92 N TRP A 6 SHEET 7 AA113 GLY B 103 SER B 117 -1 O ILE B 107 N GLY B 96 SHEET 8 AA113 GLY B 120 ARG B 132 -1 O VAL B 131 N ASP B 106 SHEET 9 AA113 ILE B 77 TRP B 85 1 N VAL B 82 O SER B 130 SHEET 10 AA113 THR B 50 ARG B 73 -1 N LEU B 66 O SER B 84 SHEET 11 AA113 ASN B 163 TRP B 185 -1 O ALA B 172 N ALA B 65 SHEET 12 AA113 ASN B 25 SER B 31 -1 N TYR B 26 O VAL B 182 SHEET 13 AA113 ILE B 15 ASN B 20 -1 N ASN B 17 O ASN B 29 SHEET 1 AA211 ALA A 142 THR A 145 0 SHEET 2 AA211 THR A 50 ARG A 73 -1 N TYR A 53 O ALA A 142 SHEET 3 AA211 ASN A 163 TRP A 185 -1 O ALA A 170 N ALA A 67 SHEET 4 AA211 SER A 35 TRP A 42 -1 N TRP A 42 O GLN A 167 SHEET 5 AA211 TYR A 5 THR A 10 -1 N LEU A 7 O GLY A 39 SHEET 6 AA211 GLY B 92 SER B 100 -1 O GLY B 92 N TRP A 6 SHEET 7 AA211 GLY B 103 SER B 117 -1 O ILE B 107 N GLY B 96 SHEET 8 AA211 GLY B 120 ARG B 132 -1 O VAL B 131 N ASP B 106 SHEET 9 AA211 ILE B 77 TRP B 85 1 N VAL B 82 O SER B 130 SHEET 10 AA211 THR B 50 ARG B 73 -1 N LEU B 66 O SER B 84 SHEET 11 AA211 ALA B 142 THR B 145 -1 O ALA B 142 N TYR B 53 SHEET 1 AA3 8 THR A 93 SER A 100 0 SHEET 2 AA3 8 GLY A 103 SER A 117 -1 O TYR A 105 N VAL A 98 SHEET 3 AA3 8 GLY A 120 ARG A 132 -1 O VAL A 131 N ASP A 106 SHEET 4 AA3 8 ILE A 77 TRP A 85 1 N VAL A 82 O SER A 130 SHEET 5 AA3 8 THR A 50 ARG A 73 -1 N GLY A 70 O TYR A 79 SHEET 6 AA3 8 ASN A 163 TRP A 185 -1 O ALA A 170 N ALA A 67 SHEET 7 AA3 8 ASN A 25 SER A 31 -1 N VAL A 28 O SER A 180 SHEET 8 AA3 8 ILE A 15 ASN A 20 -1 N VAL A 19 O SER A 27 SHEET 1 AA4 5 TYR B 5 THR B 10 0 SHEET 2 AA4 5 SER B 35 TRP B 42 -1 O GLY B 39 N LEU B 7 SHEET 3 AA4 5 ASN B 163 TRP B 185 -1 O THR B 171 N VAL B 38 SHEET 4 AA4 5 ASN B 25 SER B 31 -1 N TYR B 26 O VAL B 182 SHEET 5 AA4 5 ILE B 15 ASN B 20 -1 N ASN B 17 O ASN B 29 SHEET 1 AA5 5 TYR B 5 THR B 10 0 SHEET 2 AA5 5 SER B 35 TRP B 42 -1 O GLY B 39 N LEU B 7 SHEET 3 AA5 5 ASN B 163 TRP B 185 -1 O THR B 171 N VAL B 38 SHEET 4 AA5 5 THR B 50 ARG B 73 -1 N ALA B 65 O ALA B 172 SHEET 5 AA5 5 ALA B 142 THR B 145 -1 O ALA B 142 N TYR B 53 SHEET 1 AA6 8 TYR C 5 THR C 10 0 SHEET 2 AA6 8 SER C 35 TRP C 42 -1 O GLY C 39 N LEU C 7 SHEET 3 AA6 8 ASN C 163 TRP C 185 -1 O GLN C 167 N TRP C 42 SHEET 4 AA6 8 THR C 50 ARG C 73 -1 N ALA C 65 O ALA C 172 SHEET 5 AA6 8 ILE C 77 TRP C 85 -1 O SER C 84 N LEU C 66 SHEET 6 AA6 8 GLY C 120 ARG C 132 1 O SER C 130 N VAL C 82 SHEET 7 AA6 8 GLY C 103 SER C 117 -1 N ASP C 106 O VAL C 131 SHEET 8 AA6 8 THR C 93 SER C 100 -1 N GLY C 96 O ILE C 107 SHEET 1 AA7 5 ILE C 15 ASN C 20 0 SHEET 2 AA7 5 ASN C 25 SER C 31 -1 O ASN C 29 N ASN C 17 SHEET 3 AA7 5 ASN C 163 TRP C 185 -1 O GLY C 178 N TRP C 30 SHEET 4 AA7 5 THR C 50 ARG C 73 -1 N ALA C 65 O ALA C 172 SHEET 5 AA7 5 ALA C 142 THR C 145 -1 O ALA C 142 N TYR C 53 LINK O ASN A 20 K K A 203 1555 1555 2.86 LINK OD1 ASN A 20 K K A 203 1555 1555 2.96 LINK O GLY A 21 K K A 203 1555 1555 2.82 LINK OH TYR A 94 K K A 204 1555 1555 2.63 LINK OD1 ASP A 106 K K A 204 1555 1555 2.69 LINK K K A 203 OH TYR B 94 1555 1555 2.69 LINK K K A 203 OD1 ASP B 106 1555 1555 2.66 LINK K K A 203 O HOH B 435 1555 1555 2.92 LINK K K A 204 O HOH A 449 1555 1555 2.91 LINK K K A 204 O ASN C 20 4555 1555 2.89 LINK K K A 204 OD1 ASN C 20 4555 1555 3.01 LINK K K A 204 O GLY C 21 4555 1555 2.75 LINK O ASN B 20 K K B 204 1555 1555 2.76 LINK OD1 ASN B 20 K K B 204 1555 1555 2.96 LINK O GLY B 21 K K B 204 1555 1555 2.79 LINK K K B 204 OH TYR C 94 3455 1555 2.59 LINK K K B 204 OD1 ASP C 106 3455 1555 2.72 LINK K K B 204 O HOH C 466 1555 3445 2.83 CISPEP 1 SER A 74 PRO A 75 0 -1.46 CISPEP 2 SER A 74 PRO A 75 0 -1.25 CISPEP 3 SER B 74 PRO B 75 0 0.84 CISPEP 4 SER B 74 PRO B 75 0 0.21 CISPEP 5 SER C 74 PRO C 75 0 2.22 SITE 1 AC1 6 TRP A 63 TRP A 90 THR A 91 GLN A 127 SITE 2 AC1 6 TRP A 129 HOH A 429 SITE 1 AC2 13 SER A 35 PHE A 36 TRP A 63 ALA A 65 SITE 2 AC2 13 PRO A 116 SER A 117 TRP A 129 TYR A 166 SITE 3 AC2 13 ALA A 172 GLY A 173 TYR A 174 CL A 205 SITE 4 AC2 13 HOH A 430 SITE 1 AC3 7 ASN A 20 GLY A 21 TYR B 94 THR B 97 SITE 2 AC3 7 ASP B 106 GLN B 133 HOH B 435 SITE 1 AC4 5 TYR A 94 ASP A 106 HOH A 449 ASN C 20 SITE 2 AC4 5 GLY C 21 SITE 1 AC5 4 VAL A 37 TYR A 80 7V7 A 202 HOH A 378 SITE 1 AC6 12 SER B 35 PHE B 36 TRP B 63 ALA B 65 SITE 2 AC6 12 PRO B 116 SER B 117 TRP B 129 TYR B 166 SITE 3 AC6 12 ALA B 172 7V7 B 202 CL B 203 HOH B 365 SITE 1 AC7 7 TRP B 63 TRP B 90 THR B 91 GLN B 127 SITE 2 AC7 7 TRP B 129 7V7 B 201 HOH B 328 SITE 1 AC8 4 VAL B 37 TYR B 80 7V7 B 201 HOH B 353 SITE 1 AC9 7 ASN B 20 GLY B 21 TYR C 94 THR C 97 SITE 2 AC9 7 ASP C 106 GLN C 133 HOH C 466 SITE 1 AD1 13 SER C 35 PHE C 36 TRP C 63 ALA C 65 SITE 2 AD1 13 PRO C 116 SER C 117 TRP C 129 TYR C 166 SITE 3 AD1 13 ALA C 172 GLY C 173 TYR C 174 7V7 C 202 SITE 4 AD1 13 CL C 203 SITE 1 AD2 7 TRP C 63 TRP C 90 THR C 91 GLN C 127 SITE 2 AD2 7 TRP C 129 7V7 C 201 HOH C 433 SITE 1 AD3 3 VAL C 37 TYR C 80 7V7 C 201 CRYST1 56.070 73.250 136.640 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017835 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013652 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007319 0.00000