HEADER IMMUNE SYSTEM 26-NOV-16 5U0R TITLE CRYSTAL STRUCTURE OF DH270.UCA1 (UNLIGANDED) FROM THE DH270 BROADLY TITLE 2 NEUTRALIZING N332-GLYCAN DEPENDENT LINEAGE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DH270.UCA1 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 FRAGMENT: FAB; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DH270.UCA1 LIGHT CHAIN; COMPND 8 CHAIN: L; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 CELL_LINE: HEK 293T; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HEK 293T; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PVRC-8400; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 CELL_LINE: HEK 293T; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HEK 293T; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS FAB FRAGMENT, HIV-1, ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.FERA,S.C.HARRISON REVDAT 5 04-OCT-23 5U0R 1 REMARK REVDAT 4 11-DEC-19 5U0R 1 REMARK REVDAT 3 13-SEP-17 5U0R 1 REMARK REVDAT 2 29-MAR-17 5U0R 1 JRNL REMARK REVDAT 1 15-MAR-17 5U0R 0 JRNL AUTH M.BONSIGNORI,E.F.KREIDER,D.FERA,R.R.MEYERHOFF,T.BRADLEY, JRNL AUTH 2 K.WIEHE,S.M.ALAM,B.AUSSEDAT,W.E.WALKOWICZ,K.K.HWANG, JRNL AUTH 3 K.O.SAUNDERS,R.ZHANG,M.A.GLADDEN,A.MONROE,A.KUMAR,S.M.XIA, JRNL AUTH 4 M.COOPER,M.K.LOUDER,K.MCKEE,R.T.BAILER,B.W.PIER,C.A.JETTE, JRNL AUTH 5 G.KELSOE,W.B.WILLIAMS,L.MORRIS,J.KAPPES,K.WAGH,G.KAMANGA, JRNL AUTH 6 M.S.COHEN,P.T.HRABER,D.C.MONTEFIORI,A.TRAMA,H.X.LIAO, JRNL AUTH 7 T.B.KEPLER,M.A.MOODY,F.GAO,S.J.DANISHEFSKY,J.R.MASCOLA, JRNL AUTH 8 G.M.SHAW,B.H.HAHN,S.C.HARRISON,B.T.KORBER,B.F.HAYNES JRNL TITL STAGED INDUCTION OF HIV-1 GLYCAN-DEPENDENT BROADLY JRNL TITL 2 NEUTRALIZING ANTIBODIES. JRNL REF SCI TRANSL MED V. 9 2017 JRNL REFN ESSN 1946-6242 JRNL PMID 28298420 JRNL DOI 10.1126/SCITRANSLMED.AAI7514 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 10375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.0425 - 5.2285 0.99 2550 139 0.2401 0.2452 REMARK 3 2 5.2285 - 4.1511 0.98 2483 131 0.2119 0.2414 REMARK 3 3 4.1511 - 3.6267 0.98 2467 126 0.2639 0.3128 REMARK 3 4 3.6267 - 3.2952 0.93 2361 118 0.3053 0.3806 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.500 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3322 REMARK 3 ANGLE : 0.899 4524 REMARK 3 CHIRALITY : 0.065 505 REMARK 3 PLANARITY : 0.005 574 REMARK 3 DIHEDRAL : 13.871 1169 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -27.5434 16.0516 -26.5458 REMARK 3 T TENSOR REMARK 3 T11: 0.3991 T22: 0.4043 REMARK 3 T33: 0.2855 T12: 0.0476 REMARK 3 T13: -0.0855 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 2.1466 L22: 0.8659 REMARK 3 L33: 0.4063 L12: -0.9334 REMARK 3 L13: 0.1040 L23: -0.1357 REMARK 3 S TENSOR REMARK 3 S11: -0.0477 S12: 0.4976 S13: -0.0593 REMARK 3 S21: -0.1207 S22: -0.0084 S23: 0.2699 REMARK 3 S31: -0.0922 S32: -0.1642 S33: 0.0344 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U0R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000224638. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10410 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.295 REMARK 200 RESOLUTION RANGE LOW (A) : 43.039 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.21000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.88300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.890 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: 3TYG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M AMMONIUM SULFATE AND 100MM SODIUM REMARK 280 ACETATE, PH 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 104.55200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.36313 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 27.83233 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 104.55200 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 60.36313 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 27.83233 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 104.55200 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 60.36313 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 27.83233 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 104.55200 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 60.36313 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 27.83233 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 104.55200 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 60.36313 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 27.83233 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 104.55200 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 60.36313 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.83233 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 120.72625 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 55.66467 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 120.72625 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 55.66467 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 120.72625 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 55.66467 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 120.72625 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 55.66467 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 120.72625 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 55.66467 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 120.72625 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 55.66467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 141 REMARK 465 SER H 142 REMARK 465 LYS H 143 REMARK 465 SER H 144 REMARK 465 THR H 145 REMARK 465 SER H 146 REMARK 465 GLY H 147 REMARK 465 GLY H 148 REMARK 465 LYS H 228 REMARK 465 SER H 229 REMARK 465 CYS H 230 REMARK 465 ASP H 231 REMARK 465 LYS H 232 REMARK 465 HIS H 233 REMARK 465 HIS H 234 REMARK 465 HIS H 235 REMARK 465 HIS H 236 REMARK 465 HIS H 237 REMARK 465 HIS H 238 REMARK 465 GLN L 1 REMARK 465 SER L 2 REMARK 465 PRO L 113 REMARK 465 LYS L 114 REMARK 465 GLU L 214 REMARK 465 CYS L 215 REMARK 465 SER L 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU H 104 CG CD1 CD2 REMARK 470 ARG H 224 CG CD NE CZ NH1 NH2 REMARK 470 LYS L 68 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS L 22 CB CYS L 90 2.07 REMARK 500 CB CYS L 22 SG CYS L 90 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA H 9 117.67 61.46 REMARK 500 ALA H 16 -151.26 -87.75 REMARK 500 PRO H 41 90.87 -57.15 REMARK 500 GLN H 43 -159.50 -99.58 REMARK 500 PRO H 53 -9.74 -53.62 REMARK 500 ASN H 54 -64.47 -92.23 REMARK 500 GLN H 62 16.58 -68.86 REMARK 500 ASP H 107 123.38 74.63 REMARK 500 SER H 108 -135.40 -82.42 REMARK 500 ASN H 113 69.35 -107.79 REMARK 500 ASP H 158 83.60 58.36 REMARK 500 THR H 174 10.67 -143.75 REMARK 500 ASN H 218 91.51 28.44 REMARK 500 GLN L 16 -157.15 -176.97 REMARK 500 SER L 17 139.75 25.27 REMARK 500 SER L 27 34.94 -86.92 REMARK 500 ASP L 28 -167.90 176.76 REMARK 500 VAL L 29 -66.23 29.31 REMARK 500 SER L 31 -53.93 -147.30 REMARK 500 ASN L 33 42.98 -93.22 REMARK 500 VAL L 53 -67.29 63.48 REMARK 500 PRO L 57 -168.98 -64.30 REMARK 500 ALA L 94 50.43 -109.07 REMARK 500 SER L 118 77.56 -114.15 REMARK 500 ASP L 155 -78.66 57.51 REMARK 500 SER L 156 34.00 -146.92 REMARK 500 VAL L 159 -72.91 -70.41 REMARK 500 LYS L 160 -2.73 67.55 REMARK 500 GLU L 164 86.62 39.90 REMARK 500 ASN L 174 17.32 58.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 L 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TPL RELATED DB: PDB REMARK 900 RELATED ID: 5TPP RELATED DB: PDB REMARK 900 RELATED ID: 5TQA RELATED DB: PDB REMARK 900 RELATED ID: 5TRP RELATED DB: PDB REMARK 900 RELATED ID: 5U0U RELATED DB: PDB REMARK 900 RELATED ID: 5U15 RELATED DB: PDB REMARK 900 RELATED ID: EMD-8507 RELATED DB: EMDB DBREF 5U0R H 1 238 PDB 5U0R 5U0R 1 238 DBREF 5U0R L 1 216 PDB 5U0R 5U0R 1 216 SEQRES 1 H 238 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 238 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 238 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 H 238 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 H 238 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 H 238 GLY ARG VAL THR MET THR ARG ASP THR SER ILE SER THR SEQRES 7 H 238 ALA TYR MET GLU LEU SER ARG LEU ARG SER ASP ASP THR SEQRES 8 H 238 ALA VAL TYR TYR CYS ALA THR GLY GLY TRP ILE GLY LEU SEQRES 9 H 238 TYR TYR ASP SER SER GLY TYR PRO ASN PHE ASP TYR TRP SEQRES 10 H 238 GLY GLN GLY THR LEU VAL THR VAL SER GLY ALA SER THR SEQRES 11 H 238 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 H 238 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 H 238 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 H 238 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 H 238 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 238 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 H 238 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 H 238 ASP LYS ARG VAL GLU PRO LYS SER CYS ASP LYS HIS HIS SEQRES 19 H 238 HIS HIS HIS HIS SEQRES 1 L 216 GLN SER ALA LEU THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 L 216 PRO GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SEQRES 3 L 216 SER ASP VAL GLY SER TYR ASN LEU VAL SER TRP TYR GLN SEQRES 4 L 216 GLN HIS PRO GLY LYS ALA PRO LYS LEU MET ILE TYR GLU SEQRES 5 L 216 VAL SER LYS ARG PRO SER GLY VAL SER ASN ARG PHE SER SEQRES 6 L 216 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 L 216 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS CYS SEQRES 8 L 216 SER TYR ALA GLY SER SER ILE ILE LEU PHE GLY GLY GLY SEQRES 9 L 216 THR LYS LEU THR VAL LEU GLY GLN PRO LYS GLY ALA PRO SEQRES 10 L 216 SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 L 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 L 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SEQRES 13 L 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER SEQRES 14 L 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 L 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 L 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 L 216 THR VAL ALA PRO THR GLU CYS SER HET SO4 H 301 5 HET SO4 L 301 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *3(H2 O) HELIX 1 AA1 THR H 28 THR H 30 5 3 HELIX 2 AA2 ARG H 87 THR H 91 5 5 HELIX 3 AA3 SER H 170 ALA H 172 5 3 HELIX 4 AA4 GLN L 81 GLU L 85 5 5 HELIX 5 AA5 GLU L 127 ASN L 132 5 6 HELIX 6 AA6 PRO L 186 SER L 191 1 6 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 SER H 17 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA1 4 THR H 78 SER H 84 -1 O MET H 81 N VAL H 20 SHEET 4 AA1 4 VAL H 68 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 AA2 6 GLU H 10 LYS H 12 0 SHEET 2 AA2 6 THR H 121 VAL H 125 1 O THR H 124 N GLU H 10 SHEET 3 AA2 6 ALA H 92 TRP H 101 -1 N TYR H 94 O THR H 121 SHEET 4 AA2 6 TYR H 32 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 58 ASN H 59 -1 O ASN H 59 N TRP H 50 SHEET 1 AA3 4 SER H 134 LEU H 138 0 SHEET 2 AA3 4 ALA H 150 TYR H 159 -1 O LYS H 157 N SER H 134 SHEET 3 AA3 4 TYR H 190 VAL H 198 -1 O TYR H 190 N TYR H 159 SHEET 4 AA3 4 HIS H 178 THR H 179 -1 N HIS H 178 O VAL H 195 SHEET 1 AA4 4 SER H 134 LEU H 138 0 SHEET 2 AA4 4 ALA H 150 TYR H 159 -1 O LYS H 157 N SER H 134 SHEET 3 AA4 4 TYR H 190 VAL H 198 -1 O TYR H 190 N TYR H 159 SHEET 4 AA4 4 VAL H 183 LEU H 184 -1 N VAL H 183 O SER H 191 SHEET 1 AA5 3 THR H 165 TRP H 168 0 SHEET 2 AA5 3 TYR H 208 ASN H 213 -1 O ASN H 211 N SER H 167 SHEET 3 AA5 3 LYS H 220 VAL H 225 -1 O VAL H 225 N TYR H 208 SHEET 1 AA6 5 SER L 9 GLY L 12 0 SHEET 2 AA6 5 THR L 105 VAL L 109 1 O THR L 108 N GLY L 12 SHEET 3 AA6 5 ASP L 87 TYR L 93 -1 N TYR L 88 O THR L 105 SHEET 4 AA6 5 VAL L 35 GLN L 40 -1 N GLN L 40 O ASP L 87 SHEET 5 AA6 5 LYS L 47 ILE L 50 -1 O MET L 49 N TRP L 37 SHEET 1 AA7 4 SER L 9 GLY L 12 0 SHEET 2 AA7 4 THR L 105 VAL L 109 1 O THR L 108 N GLY L 12 SHEET 3 AA7 4 ASP L 87 TYR L 93 -1 N TYR L 88 O THR L 105 SHEET 4 AA7 4 ILE L 99 PHE L 101 -1 O LEU L 100 N SER L 92 SHEET 1 AA8 3 ILE L 20 THR L 23 0 SHEET 2 AA8 3 THR L 72 ILE L 77 -1 O LEU L 75 N ILE L 20 SHEET 3 AA8 3 PHE L 64 SER L 69 -1 N SER L 65 O THR L 76 SHEET 1 AA9 4 THR L 120 PHE L 122 0 SHEET 2 AA9 4 ALA L 134 PHE L 143 -1 O LEU L 139 N THR L 120 SHEET 3 AA9 4 TYR L 176 LEU L 184 -1 O SER L 180 N CYS L 138 SHEET 4 AA9 4 SER L 169 LYS L 170 -1 N SER L 169 O ALA L 177 SHEET 1 AB1 4 SER L 157 PRO L 158 0 SHEET 2 AB1 4 THR L 149 ALA L 154 -1 N ALA L 154 O SER L 157 SHEET 3 AB1 4 TYR L 195 HIS L 201 -1 O THR L 200 N THR L 149 SHEET 4 AB1 4 SER L 204 VAL L 210 -1 O VAL L 206 N VAL L 199 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 2 CYS H 154 CYS H 210 1555 1555 2.02 SSBOND 3 CYS L 22 CYS L 90 1555 1555 2.03 SSBOND 4 CYS L 138 CYS L 197 1555 1555 2.03 CISPEP 1 PHE H 160 PRO H 161 0 -2.90 CISPEP 2 GLU H 162 PRO H 163 0 -4.52 CISPEP 3 TYR L 144 PRO L 145 0 -3.83 SITE 1 AC1 5 GLU H 10 LYS H 12 SER H 17 VAL H 18 SITE 2 AC1 5 LYS H 19 SITE 1 AC2 4 SER L 61 SER L 67 LYS L 68 GLU L 83 CRYST1 209.104 209.104 83.497 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004782 0.002761 0.000000 0.00000 SCALE2 0.000000 0.005522 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011976 0.00000