HEADER PROTEIN BINDING 30-NOV-16 5U2L TITLE CRYSTAL STRUCTURE OF THE HSP104 N-TERMINAL DOMAIN FROM CANDIDA TITLE 2 ALBICANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK PROTEIN 104; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS (STRAIN SC5314 / ATCC MYA- SOURCE 3 2876); SOURCE 4 ORGANISM_COMMON: YEAST; SOURCE 5 ORGANISM_TAXID: 237561; SOURCE 6 STRAIN: SC5314 / ATCC MYA-2876; SOURCE 7 GENE: HSP104, ORF19.6387, CAO19.13747; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS HSP104, N-TERMINAL DOMAIN, CANDIDA ALBICANS, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.WANG,J.LI,B.SHA REVDAT 4 06-MAR-24 5U2L 1 REMARK REVDAT 3 01-JAN-20 5U2L 1 REMARK REVDAT 2 20-SEP-17 5U2L 1 REMARK REVDAT 1 19-APR-17 5U2L 0 JRNL AUTH P.WANG,J.LI,C.WEAVER,A.LUCIUS,B.SHA JRNL TITL CRYSTAL STRUCTURES OF HSP104 N-TERMINAL DOMAINS FROM JRNL TITL 2 SACCHAROMYCES CEREVISIAE AND CANDIDA ALBICANS SUGGEST THE JRNL TITL 3 MECHANISM FOR THE FUNCTION OF HSP104 IN DISSOLVING PRIONS. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 73 365 2017 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 28375147 JRNL DOI 10.1107/S2059798317002662 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 23417 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1177 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.9828 - 3.3103 0.96 2870 152 0.1653 0.1913 REMARK 3 2 3.3103 - 2.6277 1.00 2839 149 0.1774 0.2273 REMARK 3 3 2.6277 - 2.2956 1.00 2807 148 0.1706 0.2062 REMARK 3 4 2.2956 - 2.0858 1.00 2798 147 0.1638 0.1729 REMARK 3 5 2.0858 - 1.9363 1.00 2777 146 0.1724 0.2119 REMARK 3 6 1.9363 - 1.8221 0.99 2738 146 0.1707 0.2059 REMARK 3 7 1.8221 - 1.7309 0.99 2729 146 0.1794 0.2202 REMARK 3 8 1.7309 - 1.6555 0.97 2682 143 0.1830 0.2368 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1225 REMARK 3 ANGLE : 0.970 1654 REMARK 3 CHIRALITY : 0.037 187 REMARK 3 PLANARITY : 0.004 217 REMARK 3 DIHEDRAL : 13.372 473 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.9501 7.7244 39.6965 REMARK 3 T TENSOR REMARK 3 T11: 0.1994 T22: 0.2659 REMARK 3 T33: 0.1928 T12: -0.0524 REMARK 3 T13: -0.0238 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 4.3604 L22: 1.6183 REMARK 3 L33: 7.3032 L12: 1.9286 REMARK 3 L13: -5.5318 L23: -2.4286 REMARK 3 S TENSOR REMARK 3 S11: -0.5949 S12: 1.1136 S13: -0.2244 REMARK 3 S21: -0.3154 S22: 0.3700 S23: 0.1917 REMARK 3 S31: 0.5305 S32: -0.9035 S33: 0.2667 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1454 8.5240 49.3460 REMARK 3 T TENSOR REMARK 3 T11: 0.1583 T22: 0.1608 REMARK 3 T33: 0.2041 T12: -0.0022 REMARK 3 T13: 0.0117 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 5.4307 L22: 1.1438 REMARK 3 L33: 1.6491 L12: 0.6312 REMARK 3 L13: -0.2296 L23: -0.0364 REMARK 3 S TENSOR REMARK 3 S11: 0.0516 S12: 0.0248 S13: 0.0805 REMARK 3 S21: -0.0347 S22: -0.0449 S23: 0.2917 REMARK 3 S31: -0.0837 S32: -0.1440 S33: 0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4994 -0.3314 49.2460 REMARK 3 T TENSOR REMARK 3 T11: 0.1828 T22: 0.1007 REMARK 3 T33: 0.2296 T12: 0.0223 REMARK 3 T13: 0.0571 T23: 0.0490 REMARK 3 L TENSOR REMARK 3 L11: 5.6416 L22: 6.7102 REMARK 3 L33: 7.3784 L12: 0.2125 REMARK 3 L13: 0.0004 L23: -1.4336 REMARK 3 S TENSOR REMARK 3 S11: -0.1233 S12: -0.0941 S13: -0.6260 REMARK 3 S21: -0.2217 S22: -0.1957 S23: -0.4801 REMARK 3 S31: 0.4806 S32: 0.5561 S33: 0.1791 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2943 -0.9246 55.9728 REMARK 3 T TENSOR REMARK 3 T11: 0.2410 T22: 0.1522 REMARK 3 T33: 0.1973 T12: -0.0002 REMARK 3 T13: 0.0173 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 5.5097 L22: 2.8989 REMARK 3 L33: 0.7688 L12: -2.2805 REMARK 3 L13: 0.6187 L23: -0.9922 REMARK 3 S TENSOR REMARK 3 S11: 0.1180 S12: -0.0647 S13: 0.0481 REMARK 3 S21: -0.0494 S22: -0.0626 S23: -0.0310 REMARK 3 S31: -0.0108 S32: -0.0340 S33: -0.0567 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5018 11.5450 48.4116 REMARK 3 T TENSOR REMARK 3 T11: 0.2108 T22: 0.3148 REMARK 3 T33: 0.3706 T12: 0.0704 REMARK 3 T13: -0.0134 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 8.4662 L22: 1.3624 REMARK 3 L33: 3.1534 L12: 2.9032 REMARK 3 L13: 0.9626 L23: 1.2773 REMARK 3 S TENSOR REMARK 3 S11: -0.3331 S12: 0.7579 S13: 0.6496 REMARK 3 S21: -0.2509 S22: 0.0681 S23: 0.4645 REMARK 3 S31: -0.2428 S32: -0.5468 S33: 0.2143 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8557 20.8224 46.5720 REMARK 3 T TENSOR REMARK 3 T11: 0.2039 T22: 0.1465 REMARK 3 T33: 0.2070 T12: 0.0027 REMARK 3 T13: 0.0018 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 2.7909 L22: 2.4177 REMARK 3 L33: 2.8890 L12: 2.0901 REMARK 3 L13: -2.5182 L23: -1.5718 REMARK 3 S TENSOR REMARK 3 S11: 0.1064 S12: 0.1962 S13: 0.4736 REMARK 3 S21: 0.0169 S22: 0.0304 S23: 0.4177 REMARK 3 S31: -0.1855 S32: 0.0174 S33: -0.1819 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7499 11.0099 50.9658 REMARK 3 T TENSOR REMARK 3 T11: 0.1207 T22: 0.1298 REMARK 3 T33: 0.1336 T12: 0.0005 REMARK 3 T13: 0.0006 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 2.5123 L22: 1.9851 REMARK 3 L33: 2.0566 L12: 0.3708 REMARK 3 L13: 0.3285 L23: 0.0731 REMARK 3 S TENSOR REMARK 3 S11: 0.0469 S12: -0.0846 S13: -0.0891 REMARK 3 S21: 0.0829 S22: -0.0361 S23: -0.0383 REMARK 3 S31: 0.0417 S32: 0.2012 S33: -0.0018 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.0488 11.8180 35.1438 REMARK 3 T TENSOR REMARK 3 T11: 0.2369 T22: 0.3435 REMARK 3 T33: 0.1666 T12: -0.0259 REMARK 3 T13: 0.0251 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 7.0896 L22: 2.5884 REMARK 3 L33: 6.8151 L12: 2.3390 REMARK 3 L13: 4.4991 L23: 0.6726 REMARK 3 S TENSOR REMARK 3 S11: -0.0723 S12: 0.3424 S13: -0.0510 REMARK 3 S21: -0.1007 S22: -0.0399 S23: -0.1648 REMARK 3 S31: -0.0647 S32: 0.6427 S33: 0.1142 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U2L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000225176. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V2.0 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V2.0 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23417 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.656 REMARK 200 RESOLUTION RANGE LOW (A) : 35.974 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 16.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 59.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL PH 8.5, 25% (W/V) REMARK 280 PEG3,350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.76200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.38100 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.38100 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 72.76200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 39 REMARK 465 ASP A 40 REMARK 465 ASP A 41 REMARK 465 THR A 42 REMARK 465 GLU A 43 REMARK 465 GLY A 44 REMARK 465 SER A 45 REMARK 465 SER A 159 REMARK 465 SER A 160 REMARK 465 SER A 161 REMARK 465 TYR A 162 REMARK 465 GLU A 163 REMARK 465 PHE A 164 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 26 O HOH A 201 2.16 REMARK 500 O HOH A 210 O HOH A 387 2.16 REMARK 500 OG SER A 107 O HOH A 202 2.16 REMARK 500 OD1 ASP A 3 O HOH A 203 2.17 REMARK 500 O HOH A 391 O HOH A 401 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 366 O HOH A 366 4556 2.08 REMARK 500 O HOH A 377 O HOH A 378 3665 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 432 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A 433 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 434 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH A 435 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A 436 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A 437 DISTANCE = 6.39 ANGSTROMS DBREF 5U2L A 1 164 UNP Q5A376 Q5A376_CANAL 1 164 SEQRES 1 A 164 MET GLU ASP PHE THR ASP ASN ALA ILE LYS ILE ILE ASN SEQRES 2 A 164 ASN ALA THR GLU LEU ALA LYS GLN GLN ALA ASN SER GLN SEQRES 3 A 164 LEU LEU PRO LEU HIS PHE LEU ALA ALA PHE ILE PRO SER SEQRES 4 A 164 ASP ASP THR GLU GLY SER THR GLN TYR LEU LYS THR LEU SEQRES 5 A 164 VAL LYS ARG ALA ARG TYR GLU TRP GLY ASP PHE GLU ARG SEQRES 6 A 164 ILE VAL ASN ARG HIS LEU VAL LYS ILE PRO SER GLN ASN SEQRES 7 A 164 PRO PRO PRO ASP GLU ILE ARG PRO SER TYR GLN ALA GLY SEQRES 8 A 164 GLN VAL LEU THR LYS ALA ASN LYS ILE LYS GLN GLN GLN SEQRES 9 A 164 LYS ASP SER TYR VAL ALA GLN ASP HIS ILE LEU LEU ALA SEQRES 10 A 164 LEU LEU GLU ASP GLN SER ILE LYS ASP ILE PHE LYS GLU SEQRES 11 A 164 ALA GLY MET SER VAL ASP THR ILE LYS THR GLN ALA ILE SEQRES 12 A 164 GLU LEU ARG GLY SER GLN ARG ILE ASP SER ARG GLN ALA SEQRES 13 A 164 ASP SER SER SER SER TYR GLU PHE FORMUL 2 HOH *237(H2 O) HELIX 1 AA1 THR A 5 GLN A 22 1 18 HELIX 2 AA2 LEU A 28 ALA A 35 1 8 HELIX 3 AA3 GLN A 47 ALA A 56 1 10 HELIX 4 AA4 GLU A 59 ILE A 74 1 16 HELIX 5 AA5 SER A 87 GLN A 104 1 18 HELIX 6 AA6 ALA A 110 LEU A 119 1 10 HELIX 7 AA7 ASP A 121 GLY A 132 1 12 HELIX 8 AA8 SER A 134 ARG A 146 1 13 CISPEP 1 ASN A 78 PRO A 79 0 -2.14 CRYST1 55.242 55.242 109.143 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018102 0.010451 0.000000 0.00000 SCALE2 0.000000 0.020903 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009162 0.00000