data_5U32 # _entry.id 5U32 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5U32 pdb_00005u32 10.2210/pdb5u32/pdb WWPDB D_1000225177 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-11-15 2 'Structure model' 1 1 2017-11-22 3 'Structure model' 1 2 2017-12-13 4 'Structure model' 1 3 2017-12-27 5 'Structure model' 1 4 2020-01-01 6 'Structure model' 1 5 2024-03-06 7 'Structure model' 1 6 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Author supporting evidence' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' citation 5 5 'Structure model' pdbx_audit_support 6 6 'Structure model' chem_comp_atom 7 6 'Structure model' chem_comp_bond 8 6 'Structure model' database_2 9 6 'Structure model' pdbx_struct_conn_angle 10 6 'Structure model' struct_conn 11 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 3 'Structure model' '_citation.pdbx_database_id_PubMed' 3 3 'Structure model' '_citation.title' 4 3 'Structure model' '_citation_author.name' 5 4 'Structure model' '_citation.journal_volume' 6 4 'Structure model' '_citation.page_first' 7 4 'Structure model' '_citation.page_last' 8 5 'Structure model' '_pdbx_audit_support.funding_organization' 9 6 'Structure model' '_database_2.pdbx_DOI' 10 6 'Structure model' '_database_2.pdbx_database_accession' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.value' 14 6 'Structure model' '_struct_conn.pdbx_dist_value' 15 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5U32 _pdbx_database_status.recvd_initial_deposition_date 2016-12-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shuman, S.' 1 ? 'Goldgur, Y.' 2 ? 'Remus, B.S.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 45 _citation.language ? _citation.page_first 12945 _citation.page_last 12953 _citation.title 'Structural basis for the GTP specificity of the RNA kinase domain of fungal tRNA ligase.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkx1159 _citation.pdbx_database_id_PubMed 29165709 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Remus, B.S.' 1 ? primary 'Goldgur, Y.' 2 ? primary 'Shuman, S.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'tRNA ligase' 27283.586 1 6.5.1.3 ? ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 108 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MANGNEGLSTTTKYIFVPIATIGCGKTTVFNTLNNLFPQWTHIQNDNISKKAKLKICDLTLLALEDDDQSVVLFDRNNSA SRERRQIFTTIDQKRDEHLDDTVDLKYIAINFIPEDLSEEELWDITYNRVIQRGDNHQSIKSQLDENLVESVMKGFIQRY QPINTSRSPDDQFDHVIHLKLSKDENSSKSSLENVRIIIDDLVQNFPDLIKEKPADELINECFQKALDYKPTFVKN ; _entity_poly.pdbx_seq_one_letter_code_can ;MANGNEGLSTTTKYIFVPIATIGCGKTTVFNTLNNLFPQWTHIQNDNISKKAKLKICDLTLLALEDDDQSVVLFDRNNSA SRERRQIFTTIDQKRDEHLDDTVDLKYIAINFIPEDLSEEELWDITYNRVIQRGDNHQSIKSQLDENLVESVMKGFIQRY QPINTSRSPDDQFDHVIHLKLSKDENSSKSSLENVRIIIDDLVQNFPDLIKEKPADELINECFQKALDYKPTFVKN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ASN n 1 4 GLY n 1 5 ASN n 1 6 GLU n 1 7 GLY n 1 8 LEU n 1 9 SER n 1 10 THR n 1 11 THR n 1 12 THR n 1 13 LYS n 1 14 TYR n 1 15 ILE n 1 16 PHE n 1 17 VAL n 1 18 PRO n 1 19 ILE n 1 20 ALA n 1 21 THR n 1 22 ILE n 1 23 GLY n 1 24 CYS n 1 25 GLY n 1 26 LYS n 1 27 THR n 1 28 THR n 1 29 VAL n 1 30 PHE n 1 31 ASN n 1 32 THR n 1 33 LEU n 1 34 ASN n 1 35 ASN n 1 36 LEU n 1 37 PHE n 1 38 PRO n 1 39 GLN n 1 40 TRP n 1 41 THR n 1 42 HIS n 1 43 ILE n 1 44 GLN n 1 45 ASN n 1 46 ASP n 1 47 ASN n 1 48 ILE n 1 49 SER n 1 50 LYS n 1 51 LYS n 1 52 ALA n 1 53 LYS n 1 54 LEU n 1 55 LYS n 1 56 ILE n 1 57 CYS n 1 58 ASP n 1 59 LEU n 1 60 THR n 1 61 LEU n 1 62 LEU n 1 63 ALA n 1 64 LEU n 1 65 GLU n 1 66 ASP n 1 67 ASP n 1 68 ASP n 1 69 GLN n 1 70 SER n 1 71 VAL n 1 72 VAL n 1 73 LEU n 1 74 PHE n 1 75 ASP n 1 76 ARG n 1 77 ASN n 1 78 ASN n 1 79 SER n 1 80 ALA n 1 81 SER n 1 82 ARG n 1 83 GLU n 1 84 ARG n 1 85 ARG n 1 86 GLN n 1 87 ILE n 1 88 PHE n 1 89 THR n 1 90 THR n 1 91 ILE n 1 92 ASP n 1 93 GLN n 1 94 LYS n 1 95 ARG n 1 96 ASP n 1 97 GLU n 1 98 HIS n 1 99 LEU n 1 100 ASP n 1 101 ASP n 1 102 THR n 1 103 VAL n 1 104 ASP n 1 105 LEU n 1 106 LYS n 1 107 TYR n 1 108 ILE n 1 109 ALA n 1 110 ILE n 1 111 ASN n 1 112 PHE n 1 113 ILE n 1 114 PRO n 1 115 GLU n 1 116 ASP n 1 117 LEU n 1 118 SER n 1 119 GLU n 1 120 GLU n 1 121 GLU n 1 122 LEU n 1 123 TRP n 1 124 ASP n 1 125 ILE n 1 126 THR n 1 127 TYR n 1 128 ASN n 1 129 ARG n 1 130 VAL n 1 131 ILE n 1 132 GLN n 1 133 ARG n 1 134 GLY n 1 135 ASP n 1 136 ASN n 1 137 HIS n 1 138 GLN n 1 139 SER n 1 140 ILE n 1 141 LYS n 1 142 SER n 1 143 GLN n 1 144 LEU n 1 145 ASP n 1 146 GLU n 1 147 ASN n 1 148 LEU n 1 149 VAL n 1 150 GLU n 1 151 SER n 1 152 VAL n 1 153 MET n 1 154 LYS n 1 155 GLY n 1 156 PHE n 1 157 ILE n 1 158 GLN n 1 159 ARG n 1 160 TYR n 1 161 GLN n 1 162 PRO n 1 163 ILE n 1 164 ASN n 1 165 THR n 1 166 SER n 1 167 ARG n 1 168 SER n 1 169 PRO n 1 170 ASP n 1 171 ASP n 1 172 GLN n 1 173 PHE n 1 174 ASP n 1 175 HIS n 1 176 VAL n 1 177 ILE n 1 178 HIS n 1 179 LEU n 1 180 LYS n 1 181 LEU n 1 182 SER n 1 183 LYS n 1 184 ASP n 1 185 GLU n 1 186 ASN n 1 187 SER n 1 188 SER n 1 189 LYS n 1 190 SER n 1 191 SER n 1 192 LEU n 1 193 GLU n 1 194 ASN n 1 195 VAL n 1 196 ARG n 1 197 ILE n 1 198 ILE n 1 199 ILE n 1 200 ASP n 1 201 ASP n 1 202 LEU n 1 203 VAL n 1 204 GLN n 1 205 ASN n 1 206 PHE n 1 207 PRO n 1 208 ASP n 1 209 LEU n 1 210 ILE n 1 211 LYS n 1 212 GLU n 1 213 LYS n 1 214 PRO n 1 215 ALA n 1 216 ASP n 1 217 GLU n 1 218 LEU n 1 219 ILE n 1 220 ASN n 1 221 GLU n 1 222 CYS n 1 223 PHE n 1 224 GLN n 1 225 LYS n 1 226 ALA n 1 227 LEU n 1 228 ASP n 1 229 TYR n 1 230 LYS n 1 231 PRO n 1 232 THR n 1 233 PHE n 1 234 VAL n 1 235 LYS n 1 236 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 236 _entity_src_gen.gene_src_common_name Yeast _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'LIG1, RLG1, TRL1, CAALFM_C702060WA, CaJ7.0238, CaO19.13864, CaO19.6511' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'SC5314 / ATCC MYA-2876' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Candida albicans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 237561 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ;Escherichia coli 'BL21-Gold(DE3)pLysS AG' ; _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 866768 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 400 ? ? ? A . n A 1 2 ALA 2 401 ? ? ? A . n A 1 3 ASN 3 402 ? ? ? A . n A 1 4 GLY 4 403 ? ? ? A . n A 1 5 ASN 5 404 ? ? ? A . n A 1 6 GLU 6 405 ? ? ? A . n A 1 7 GLY 7 406 ? ? ? A . n A 1 8 LEU 8 407 407 LEU LEU A . n A 1 9 SER 9 408 408 SER SER A . n A 1 10 THR 10 409 409 THR THR A . n A 1 11 THR 11 410 410 THR THR A . n A 1 12 THR 12 411 411 THR THR A . n A 1 13 LYS 13 412 412 LYS LYS A . n A 1 14 TYR 14 413 413 TYR TYR A . n A 1 15 ILE 15 414 414 ILE ILE A . n A 1 16 PHE 16 415 415 PHE PHE A . n A 1 17 VAL 17 416 416 VAL VAL A . n A 1 18 PRO 18 417 417 PRO PRO A . n A 1 19 ILE 19 418 418 ILE ILE A . n A 1 20 ALA 20 419 419 ALA ALA A . n A 1 21 THR 21 420 420 THR THR A . n A 1 22 ILE 22 421 421 ILE ILE A . n A 1 23 GLY 23 422 422 GLY GLY A . n A 1 24 CYS 24 423 423 CYS CYS A . n A 1 25 GLY 25 424 424 GLY GLY A . n A 1 26 LYS 26 425 425 LYS LYS A . n A 1 27 THR 27 426 426 THR THR A . n A 1 28 THR 28 427 427 THR THR A . n A 1 29 VAL 29 428 428 VAL VAL A . n A 1 30 PHE 30 429 429 PHE PHE A . n A 1 31 ASN 31 430 430 ASN ASN A . n A 1 32 THR 32 431 431 THR THR A . n A 1 33 LEU 33 432 432 LEU LEU A . n A 1 34 ASN 34 433 433 ASN ASN A . n A 1 35 ASN 35 434 434 ASN ASN A . n A 1 36 LEU 36 435 435 LEU LEU A . n A 1 37 PHE 37 436 436 PHE PHE A . n A 1 38 PRO 38 437 437 PRO PRO A . n A 1 39 GLN 39 438 438 GLN GLN A . n A 1 40 TRP 40 439 439 TRP TRP A . n A 1 41 THR 41 440 440 THR THR A . n A 1 42 HIS 42 441 441 HIS HIS A . n A 1 43 ILE 43 442 442 ILE ILE A . n A 1 44 GLN 44 443 443 GLN GLN A . n A 1 45 ASN 45 444 444 ASN ASN A . n A 1 46 ASP 46 445 445 ASP ASP A . n A 1 47 ASN 47 446 446 ASN ASN A . n A 1 48 ILE 48 447 447 ILE ILE A . n A 1 49 SER 49 448 448 SER SER A . n A 1 50 LYS 50 449 449 LYS LYS A . n A 1 51 LYS 51 450 450 LYS LYS A . n A 1 52 ALA 52 451 451 ALA ALA A . n A 1 53 LYS 53 452 452 LYS LYS A . n A 1 54 LEU 54 453 453 LEU LEU A . n A 1 55 LYS 55 454 454 LYS LYS A . n A 1 56 ILE 56 455 455 ILE ILE A . n A 1 57 CYS 57 456 456 CYS CYS A . n A 1 58 ASP 58 457 457 ASP ASP A . n A 1 59 LEU 59 458 458 LEU LEU A . n A 1 60 THR 60 459 459 THR THR A . n A 1 61 LEU 61 460 460 LEU LEU A . n A 1 62 LEU 62 461 461 LEU LEU A . n A 1 63 ALA 63 462 462 ALA ALA A . n A 1 64 LEU 64 463 463 LEU LEU A . n A 1 65 GLU 65 464 464 GLU GLU A . n A 1 66 ASP 66 465 465 ASP ASP A . n A 1 67 ASP 67 466 466 ASP ASP A . n A 1 68 ASP 68 467 467 ASP ASP A . n A 1 69 GLN 69 468 468 GLN GLN A . n A 1 70 SER 70 469 469 SER SER A . n A 1 71 VAL 71 470 470 VAL VAL A . n A 1 72 VAL 72 471 471 VAL VAL A . n A 1 73 LEU 73 472 472 LEU LEU A . n A 1 74 PHE 74 473 473 PHE PHE A . n A 1 75 ASP 75 474 474 ASP ASP A . n A 1 76 ARG 76 475 475 ARG ARG A . n A 1 77 ASN 77 476 476 ASN ASN A . n A 1 78 ASN 78 477 477 ASN ASN A . n A 1 79 SER 79 478 478 SER SER A . n A 1 80 ALA 80 479 479 ALA ALA A . n A 1 81 SER 81 480 480 SER SER A . n A 1 82 ARG 82 481 481 ARG ARG A . n A 1 83 GLU 83 482 482 GLU GLU A . n A 1 84 ARG 84 483 483 ARG ARG A . n A 1 85 ARG 85 484 484 ARG ARG A . n A 1 86 GLN 86 485 485 GLN GLN A . n A 1 87 ILE 87 486 486 ILE ILE A . n A 1 88 PHE 88 487 487 PHE PHE A . n A 1 89 THR 89 488 488 THR THR A . n A 1 90 THR 90 489 489 THR THR A . n A 1 91 ILE 91 490 490 ILE ILE A . n A 1 92 ASP 92 491 491 ASP ASP A . n A 1 93 GLN 93 492 492 GLN GLN A . n A 1 94 LYS 94 493 493 LYS LYS A . n A 1 95 ARG 95 494 494 ARG ARG A . n A 1 96 ASP 96 495 495 ASP ASP A . n A 1 97 GLU 97 496 496 GLU GLU A . n A 1 98 HIS 98 497 497 HIS HIS A . n A 1 99 LEU 99 498 498 LEU LEU A . n A 1 100 ASP 100 499 499 ASP ASP A . n A 1 101 ASP 101 500 500 ASP ASP A . n A 1 102 THR 102 501 501 THR THR A . n A 1 103 VAL 103 502 502 VAL VAL A . n A 1 104 ASP 104 503 503 ASP ASP A . n A 1 105 LEU 105 504 504 LEU LEU A . n A 1 106 LYS 106 505 505 LYS LYS A . n A 1 107 TYR 107 506 506 TYR TYR A . n A 1 108 ILE 108 507 507 ILE ILE A . n A 1 109 ALA 109 508 508 ALA ALA A . n A 1 110 ILE 110 509 509 ILE ILE A . n A 1 111 ASN 111 510 510 ASN ASN A . n A 1 112 PHE 112 511 511 PHE PHE A . n A 1 113 ILE 113 512 512 ILE ILE A . n A 1 114 PRO 114 513 513 PRO PRO A . n A 1 115 GLU 115 514 514 GLU GLU A . n A 1 116 ASP 116 515 515 ASP ASP A . n A 1 117 LEU 117 516 516 LEU LEU A . n A 1 118 SER 118 517 517 SER SER A . n A 1 119 GLU 119 518 518 GLU GLU A . n A 1 120 GLU 120 519 519 GLU GLU A . n A 1 121 GLU 121 520 520 GLU GLU A . n A 1 122 LEU 122 521 521 LEU LEU A . n A 1 123 TRP 123 522 522 TRP TRP A . n A 1 124 ASP 124 523 523 ASP ASP A . n A 1 125 ILE 125 524 524 ILE ILE A . n A 1 126 THR 126 525 525 THR THR A . n A 1 127 TYR 127 526 526 TYR TYR A . n A 1 128 ASN 128 527 527 ASN ASN A . n A 1 129 ARG 129 528 528 ARG ARG A . n A 1 130 VAL 130 529 529 VAL VAL A . n A 1 131 ILE 131 530 530 ILE ILE A . n A 1 132 GLN 132 531 531 GLN GLN A . n A 1 133 ARG 133 532 ? ? ? A . n A 1 134 GLY 134 533 ? ? ? A . n A 1 135 ASP 135 534 ? ? ? A . n A 1 136 ASN 136 535 ? ? ? A . n A 1 137 HIS 137 536 ? ? ? A . n A 1 138 GLN 138 537 ? ? ? A . n A 1 139 SER 139 538 ? ? ? A . n A 1 140 ILE 140 539 ? ? ? A . n A 1 141 LYS 141 540 ? ? ? A . n A 1 142 SER 142 541 ? ? ? A . n A 1 143 GLN 143 542 ? ? ? A . n A 1 144 LEU 144 543 543 LEU LEU A . n A 1 145 ASP 145 544 544 ASP ASP A . n A 1 146 GLU 146 545 545 GLU GLU A . n A 1 147 ASN 147 546 546 ASN ASN A . n A 1 148 LEU 148 547 547 LEU LEU A . n A 1 149 VAL 149 548 548 VAL VAL A . n A 1 150 GLU 150 549 549 GLU GLU A . n A 1 151 SER 151 550 550 SER SER A . n A 1 152 VAL 152 551 551 VAL VAL A . n A 1 153 MET 153 552 552 MET MET A . n A 1 154 LYS 154 553 553 LYS LYS A . n A 1 155 GLY 155 554 554 GLY GLY A . n A 1 156 PHE 156 555 555 PHE PHE A . n A 1 157 ILE 157 556 556 ILE ILE A . n A 1 158 GLN 158 557 557 GLN GLN A . n A 1 159 ARG 159 558 558 ARG ARG A . n A 1 160 TYR 160 559 559 TYR TYR A . n A 1 161 GLN 161 560 560 GLN GLN A . n A 1 162 PRO 162 561 561 PRO PRO A . n A 1 163 ILE 163 562 562 ILE ILE A . n A 1 164 ASN 164 563 563 ASN ASN A . n A 1 165 THR 165 564 564 THR THR A . n A 1 166 SER 166 565 565 SER SER A . n A 1 167 ARG 167 566 566 ARG ARG A . n A 1 168 SER 168 567 567 SER SER A . n A 1 169 PRO 169 568 568 PRO PRO A . n A 1 170 ASP 170 569 569 ASP ASP A . n A 1 171 ASP 171 570 570 ASP ASP A . n A 1 172 GLN 172 571 571 GLN GLN A . n A 1 173 PHE 173 572 572 PHE PHE A . n A 1 174 ASP 174 573 573 ASP ASP A . n A 1 175 HIS 175 574 574 HIS HIS A . n A 1 176 VAL 176 575 575 VAL VAL A . n A 1 177 ILE 177 576 576 ILE ILE A . n A 1 178 HIS 178 577 577 HIS HIS A . n A 1 179 LEU 179 578 578 LEU LEU A . n A 1 180 LYS 180 579 579 LYS LYS A . n A 1 181 LEU 181 580 580 LEU LEU A . n A 1 182 SER 182 581 581 SER SER A . n A 1 183 LYS 183 582 582 LYS LYS A . n A 1 184 ASP 184 583 583 ASP ASP A . n A 1 185 GLU 185 584 584 GLU GLU A . n A 1 186 ASN 186 585 585 ASN ASN A . n A 1 187 SER 187 586 586 SER SER A . n A 1 188 SER 188 587 587 SER SER A . n A 1 189 LYS 189 588 588 LYS LYS A . n A 1 190 SER 190 589 589 SER SER A . n A 1 191 SER 191 590 590 SER SER A . n A 1 192 LEU 192 591 591 LEU LEU A . n A 1 193 GLU 193 592 592 GLU GLU A . n A 1 194 ASN 194 593 593 ASN ASN A . n A 1 195 VAL 195 594 594 VAL VAL A . n A 1 196 ARG 196 595 595 ARG ARG A . n A 1 197 ILE 197 596 596 ILE ILE A . n A 1 198 ILE 198 597 597 ILE ILE A . n A 1 199 ILE 199 598 598 ILE ILE A . n A 1 200 ASP 200 599 599 ASP ASP A . n A 1 201 ASP 201 600 600 ASP ASP A . n A 1 202 LEU 202 601 601 LEU LEU A . n A 1 203 VAL 203 602 602 VAL VAL A . n A 1 204 GLN 204 603 603 GLN GLN A . n A 1 205 ASN 205 604 604 ASN ASN A . n A 1 206 PHE 206 605 605 PHE PHE A . n A 1 207 PRO 207 606 606 PRO PRO A . n A 1 208 ASP 208 607 607 ASP ASP A . n A 1 209 LEU 209 608 608 LEU LEU A . n A 1 210 ILE 210 609 609 ILE ILE A . n A 1 211 LYS 211 610 610 LYS LYS A . n A 1 212 GLU 212 611 611 GLU GLU A . n A 1 213 LYS 213 612 612 LYS LYS A . n A 1 214 PRO 214 613 613 PRO PRO A . n A 1 215 ALA 215 614 614 ALA ALA A . n A 1 216 ASP 216 615 615 ASP ASP A . n A 1 217 GLU 217 616 616 GLU GLU A . n A 1 218 LEU 218 617 617 LEU LEU A . n A 1 219 ILE 219 618 618 ILE ILE A . n A 1 220 ASN 220 619 619 ASN ASN A . n A 1 221 GLU 221 620 620 GLU GLU A . n A 1 222 CYS 222 621 621 CYS CYS A . n A 1 223 PHE 223 622 622 PHE PHE A . n A 1 224 GLN 224 623 623 GLN GLN A . n A 1 225 LYS 225 624 624 LYS LYS A . n A 1 226 ALA 226 625 625 ALA ALA A . n A 1 227 LEU 227 626 626 LEU LEU A . n A 1 228 ASP 228 627 627 ASP ASP A . n A 1 229 TYR 229 628 628 TYR TYR A . n A 1 230 LYS 230 629 629 LYS LYS A . n A 1 231 PRO 231 630 630 PRO PRO A . n A 1 232 THR 232 631 ? ? ? A . n A 1 233 PHE 233 632 ? ? ? A . n A 1 234 VAL 234 633 ? ? ? A . n A 1 235 LYS 235 634 ? ? ? A . n A 1 236 ASN 236 635 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 701 1 GDP GDP A . C 3 MG 1 702 1 MG MG A . D 4 HOH 1 801 558 HOH HOH A . D 4 HOH 2 802 628 HOH HOH A . D 4 HOH 3 803 595 HOH HOH A . D 4 HOH 4 804 573 HOH HOH A . D 4 HOH 5 805 619 HOH HOH A . D 4 HOH 6 806 615 HOH HOH A . D 4 HOH 7 807 611 HOH HOH A . D 4 HOH 8 808 604 HOH HOH A . D 4 HOH 9 809 547 HOH HOH A . D 4 HOH 10 810 544 HOH HOH A . D 4 HOH 11 811 612 HOH HOH A . D 4 HOH 12 812 542 HOH HOH A . D 4 HOH 13 813 621 HOH HOH A . D 4 HOH 14 814 556 HOH HOH A . D 4 HOH 15 815 3 HOH HOH A . D 4 HOH 16 816 567 HOH HOH A . D 4 HOH 17 817 555 HOH HOH A . D 4 HOH 18 818 571 HOH HOH A . D 4 HOH 19 819 626 HOH HOH A . D 4 HOH 20 820 533 HOH HOH A . D 4 HOH 21 821 545 HOH HOH A . D 4 HOH 22 822 550 HOH HOH A . D 4 HOH 23 823 625 HOH HOH A . D 4 HOH 24 824 566 HOH HOH A . D 4 HOH 25 825 537 HOH HOH A . D 4 HOH 26 826 565 HOH HOH A . D 4 HOH 27 827 620 HOH HOH A . D 4 HOH 28 828 5 HOH HOH A . D 4 HOH 29 829 574 HOH HOH A . D 4 HOH 30 830 586 HOH HOH A . D 4 HOH 31 831 585 HOH HOH A . D 4 HOH 32 832 572 HOH HOH A . D 4 HOH 33 833 6 HOH HOH A . D 4 HOH 34 834 543 HOH HOH A . D 4 HOH 35 835 548 HOH HOH A . D 4 HOH 36 836 549 HOH HOH A . D 4 HOH 37 837 584 HOH HOH A . D 4 HOH 38 838 2 HOH HOH A . D 4 HOH 39 839 557 HOH HOH A . D 4 HOH 40 840 1 HOH HOH A . D 4 HOH 41 841 605 HOH HOH A . D 4 HOH 42 842 536 HOH HOH A . D 4 HOH 43 843 560 HOH HOH A . D 4 HOH 44 844 587 HOH HOH A . D 4 HOH 45 845 538 HOH HOH A . D 4 HOH 46 846 570 HOH HOH A . D 4 HOH 47 847 581 HOH HOH A . D 4 HOH 48 848 624 HOH HOH A . D 4 HOH 49 849 541 HOH HOH A . D 4 HOH 50 850 582 HOH HOH A . D 4 HOH 51 851 540 HOH HOH A . D 4 HOH 52 852 600 HOH HOH A . D 4 HOH 53 853 535 HOH HOH A . D 4 HOH 54 854 596 HOH HOH A . D 4 HOH 55 855 617 HOH HOH A . D 4 HOH 56 856 568 HOH HOH A . D 4 HOH 57 857 551 HOH HOH A . D 4 HOH 58 858 563 HOH HOH A . D 4 HOH 59 859 564 HOH HOH A . D 4 HOH 60 860 590 HOH HOH A . D 4 HOH 61 861 606 HOH HOH A . D 4 HOH 62 862 554 HOH HOH A . D 4 HOH 63 863 552 HOH HOH A . D 4 HOH 64 864 578 HOH HOH A . D 4 HOH 65 865 583 HOH HOH A . D 4 HOH 66 866 576 HOH HOH A . D 4 HOH 67 867 569 HOH HOH A . D 4 HOH 68 868 546 HOH HOH A . D 4 HOH 69 869 559 HOH HOH A . D 4 HOH 70 870 561 HOH HOH A . D 4 HOH 71 871 601 HOH HOH A . D 4 HOH 72 872 562 HOH HOH A . D 4 HOH 73 873 4 HOH HOH A . D 4 HOH 74 874 534 HOH HOH A . D 4 HOH 75 875 614 HOH HOH A . D 4 HOH 76 876 618 HOH HOH A . D 4 HOH 77 877 593 HOH HOH A . D 4 HOH 78 878 589 HOH HOH A . D 4 HOH 79 879 591 HOH HOH A . D 4 HOH 80 880 622 HOH HOH A . D 4 HOH 81 881 532 HOH HOH A . D 4 HOH 82 882 603 HOH HOH A . D 4 HOH 83 883 607 HOH HOH A . D 4 HOH 84 884 539 HOH HOH A . D 4 HOH 85 885 609 HOH HOH A . D 4 HOH 86 886 553 HOH HOH A . D 4 HOH 87 887 613 HOH HOH A . D 4 HOH 88 888 627 HOH HOH A . D 4 HOH 89 889 598 HOH HOH A . D 4 HOH 90 890 594 HOH HOH A . D 4 HOH 91 891 577 HOH HOH A . D 4 HOH 92 892 608 HOH HOH A . D 4 HOH 93 893 630 HOH HOH A . D 4 HOH 94 894 599 HOH HOH A . D 4 HOH 95 895 575 HOH HOH A . D 4 HOH 96 896 602 HOH HOH A . D 4 HOH 97 897 592 HOH HOH A . D 4 HOH 98 898 579 HOH HOH A . D 4 HOH 99 899 588 HOH HOH A . D 4 HOH 100 900 610 HOH HOH A . D 4 HOH 101 901 633 HOH HOH A . D 4 HOH 102 902 580 HOH HOH A . D 4 HOH 103 903 597 HOH HOH A . D 4 HOH 104 904 629 HOH HOH A . D 4 HOH 105 905 632 HOH HOH A . D 4 HOH 106 906 616 HOH HOH A . D 4 HOH 107 907 631 HOH HOH A . D 4 HOH 108 908 623 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXCD ? ? ? . 4 # _cell.entry_id 5U32 _cell.length_a 49.944 _cell.length_b 56.304 _cell.length_c 82.393 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U32 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5U32 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.2M sodium dihydrogen phosphate 20% PEG 3350 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-07-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97920 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97920 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5U32 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.19 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20855 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.percent_possible_obs 90.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.097 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.19 _reflns_shell.d_res_low 2.3 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 542 _reflns_shell.percent_possible_all 85.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.689 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.641 _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5U32 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20855 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.487 _refine.ls_d_res_high 2.191 _refine.ls_percent_reflns_obs 90.38 _refine.ls_R_factor_obs 0.1933 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1877 _refine.ls_R_factor_R_free 0.2456 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.99 _refine.ls_number_reflns_R_free 2083 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 'Hg derivative' _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.28 _refine.pdbx_overall_phase_error 25.53 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1742 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 108 _refine_hist.number_atoms_total 1879 _refine_hist.d_res_high 2.191 _refine_hist.d_res_low 46.487 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 1801 'X-RAY DIFFRACTION' ? f_angle_d 0.979 ? ? 2446 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 5.395 ? ? 1104 'X-RAY DIFFRACTION' ? f_chiral_restr 0.051 ? ? 282 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 313 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.1908 2.2418 951 0.2580 69.00 0.3411 . . 107 . . . . 'X-RAY DIFFRACTION' . 2.2418 2.2978 960 0.2430 70.00 0.2957 . . 102 . . . . 'X-RAY DIFFRACTION' . 2.2978 2.3600 1102 0.2391 79.00 0.3049 . . 118 . . . . 'X-RAY DIFFRACTION' . 2.3600 2.4294 1262 0.2284 90.00 0.2953 . . 133 . . . . 'X-RAY DIFFRACTION' . 2.4294 2.5078 1272 0.2366 92.00 0.3020 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.5078 2.5974 1303 0.2151 94.00 0.2882 . . 144 . . . . 'X-RAY DIFFRACTION' . 2.5974 2.7014 1298 0.2066 95.00 0.2607 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.7014 2.8244 1288 0.2317 94.00 0.2677 . . 148 . . . . 'X-RAY DIFFRACTION' . 2.8244 2.9732 1333 0.2341 96.00 0.2974 . . 154 . . . . 'X-RAY DIFFRACTION' . 2.9732 3.1595 1362 0.2106 97.00 0.3126 . . 151 . . . . 'X-RAY DIFFRACTION' . 3.1595 3.4034 1342 0.1936 98.00 0.2252 . . 148 . . . . 'X-RAY DIFFRACTION' . 3.4034 3.7457 1316 0.1742 95.00 0.2231 . . 147 . . . . 'X-RAY DIFFRACTION' . 3.7457 4.2874 1338 0.1549 97.00 0.2246 . . 153 . . . . 'X-RAY DIFFRACTION' . 4.2874 5.4004 1313 0.1453 95.00 0.1906 . . 149 . . . . 'X-RAY DIFFRACTION' . 5.4004 46.4970 1332 0.1651 96.00 0.2206 . . 147 . . . . # _struct.entry_id 5U32 _struct.title 'Crystal Structure of Fungal RNA Kinase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5U32 _struct_keywords.text 'RNA ligase, RNA repair, polynucleotide kinase, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5U32 _struct_ref.pdbx_db_accession 5U32 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5U32 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 236 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5U32 _struct_ref_seq.db_align_beg 400 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 635 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 400 _struct_ref_seq.pdbx_auth_seq_align_end 635 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 25 ? PHE A 37 ? GLY A 424 PHE A 436 1 ? 13 HELX_P HELX_P2 AA2 ASP A 46 ? ILE A 48 ? ASP A 445 ILE A 447 5 ? 3 HELX_P HELX_P3 AA3 LYS A 55 ? ALA A 63 ? LYS A 454 ALA A 462 1 ? 9 HELX_P HELX_P4 AA4 ALA A 80 ? LEU A 99 ? ALA A 479 LEU A 498 1 ? 20 HELX_P HELX_P5 AA5 SER A 118 ? GLN A 132 ? SER A 517 GLN A 531 1 ? 15 HELX_P HELX_P6 AA6 ASP A 145 ? ARG A 159 ? ASP A 544 ARG A 558 1 ? 15 HELX_P HELX_P7 AA7 PRO A 169 ? PHE A 173 ? PRO A 568 PHE A 572 5 ? 5 HELX_P HELX_P8 AA8 LYS A 189 ? PHE A 206 ? LYS A 588 PHE A 605 1 ? 18 HELX_P HELX_P9 AA9 ALA A 215 ? ASP A 228 ? ALA A 614 ASP A 627 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 27 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 426 A MG 702 1_555 ? ? ? ? ? ? ? 2.163 ? ? metalc2 metalc ? ? B GDP . O1B ? ? ? 1_555 C MG . MG ? ? A GDP 701 A MG 702 1_555 ? ? ? ? ? ? ? 2.270 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 702 A HOH 823 1_555 ? ? ? ? ? ? ? 2.205 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 702 A HOH 841 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 702 A HOH 843 1_555 ? ? ? ? ? ? ? 2.236 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 702 A HOH 848 1_555 ? ? ? ? ? ? ? 2.106 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 27 ? A THR 426 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O1B ? B GDP . ? A GDP 701 ? 1_555 80.7 ? 2 OG1 ? A THR 27 ? A THR 426 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 823 ? 1_555 81.5 ? 3 O1B ? B GDP . ? A GDP 701 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 823 ? 1_555 161.7 ? 4 OG1 ? A THR 27 ? A THR 426 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 841 ? 1_555 104.8 ? 5 O1B ? B GDP . ? A GDP 701 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 841 ? 1_555 92.9 ? 6 O ? D HOH . ? A HOH 823 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 841 ? 1_555 95.7 ? 7 OG1 ? A THR 27 ? A THR 426 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 843 ? 1_555 81.8 ? 8 O1B ? B GDP . ? A GDP 701 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 843 ? 1_555 90.9 ? 9 O ? D HOH . ? A HOH 823 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 843 ? 1_555 82.4 ? 10 O ? D HOH . ? A HOH 841 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 843 ? 1_555 172.8 ? 11 OG1 ? A THR 27 ? A THR 426 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 848 ? 1_555 169.4 ? 12 O1B ? B GDP . ? A GDP 701 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 848 ? 1_555 102.1 ? 13 O ? D HOH . ? A HOH 823 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 848 ? 1_555 94.7 ? 14 O ? D HOH . ? A HOH 841 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 848 ? 1_555 85.4 ? 15 O ? D HOH . ? A HOH 843 ? 1_555 MG ? C MG . ? A MG 702 ? 1_555 O ? D HOH . ? A HOH 848 ? 1_555 87.9 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 168 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 567 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 169 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 568 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.23 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 41 ? GLN A 44 ? THR A 440 GLN A 443 AA1 2 VAL A 71 ? ASP A 75 ? VAL A 470 ASP A 474 AA1 3 THR A 12 ? ILE A 19 ? THR A 411 ILE A 418 AA1 4 ASP A 104 ? ASN A 111 ? ASP A 503 ASN A 510 AA1 5 HIS A 175 ? HIS A 178 ? HIS A 574 HIS A 577 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 41 ? N THR A 440 O LEU A 73 ? O LEU A 472 AA1 2 3 O VAL A 72 ? O VAL A 471 N PHE A 16 ? N PHE A 415 AA1 3 4 N LYS A 13 ? N LYS A 412 O ASP A 104 ? O ASP A 503 AA1 4 5 N ALA A 109 ? N ALA A 508 O ILE A 177 ? O ILE A 576 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDP 701 ? 18 'binding site for residue GDP A 701' AC2 Software A MG 702 ? 7 'binding site for residue MG A 702' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 GLY A 23 ? GLY A 422 . ? 1_555 ? 2 AC1 18 CYS A 24 ? CYS A 423 . ? 1_555 ? 3 AC1 18 GLY A 25 ? GLY A 424 . ? 1_555 ? 4 AC1 18 LYS A 26 ? LYS A 425 . ? 1_555 ? 5 AC1 18 THR A 27 ? THR A 426 . ? 1_555 ? 6 AC1 18 THR A 28 ? THR A 427 . ? 1_555 ? 7 AC1 18 ASP A 184 ? ASP A 583 . ? 1_555 ? 8 AC1 18 LYS A 189 ? LYS A 588 . ? 1_555 ? 9 AC1 18 SER A 190 ? SER A 589 . ? 1_555 ? 10 AC1 18 SER A 191 ? SER A 590 . ? 1_555 ? 11 AC1 18 LEU A 227 ? LEU A 626 . ? 1_555 ? 12 AC1 18 MG C . ? MG A 702 . ? 1_555 ? 13 AC1 18 HOH D . ? HOH A 837 . ? 1_555 ? 14 AC1 18 HOH D . ? HOH A 841 . ? 1_555 ? 15 AC1 18 HOH D . ? HOH A 848 . ? 1_555 ? 16 AC1 18 HOH D . ? HOH A 852 . ? 1_555 ? 17 AC1 18 HOH D . ? HOH A 854 . ? 1_555 ? 18 AC1 18 HOH D . ? HOH A 860 . ? 1_555 ? 19 AC2 7 THR A 27 ? THR A 426 . ? 1_555 ? 20 AC2 7 ASP A 46 ? ASP A 445 . ? 1_555 ? 21 AC2 7 GDP B . ? GDP A 701 . ? 1_555 ? 22 AC2 7 HOH D . ? HOH A 823 . ? 1_555 ? 23 AC2 7 HOH D . ? HOH A 841 . ? 1_555 ? 24 AC2 7 HOH D . ? HOH A 843 . ? 1_555 ? 25 AC2 7 HOH D . ? HOH A 848 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 901 ? ? O A HOH 905 ? ? 1.92 2 1 O A HOH 819 ? ? O A HOH 888 ? ? 1.92 3 1 NE2 A GLN 571 ? ? O A HOH 801 ? ? 1.93 4 1 OE2 A GLU 496 ? ? O A HOH 802 ? ? 1.97 5 1 OG A SER 587 ? ? O A HOH 803 ? ? 2.04 6 1 O A ASP 583 ? ? O A HOH 804 ? ? 2.13 7 1 OH A TYR 628 ? ? O A HOH 805 ? ? 2.14 8 1 ND2 A ASN 619 ? ? O A HOH 806 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 408 ? ? -136.00 -43.10 2 1 THR A 409 ? ? -154.19 75.75 3 1 LYS A 450 ? ? -107.64 63.38 4 1 HIS A 574 ? ? -175.63 148.03 5 1 SER A 586 ? ? 59.66 18.25 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 907 ? 5.97 . 2 1 O ? A HOH 908 ? 6.88 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 400 ? A MET 1 2 1 Y 1 A ALA 401 ? A ALA 2 3 1 Y 1 A ASN 402 ? A ASN 3 4 1 Y 1 A GLY 403 ? A GLY 4 5 1 Y 1 A ASN 404 ? A ASN 5 6 1 Y 1 A GLU 405 ? A GLU 6 7 1 Y 1 A GLY 406 ? A GLY 7 8 1 Y 1 A ARG 532 ? A ARG 133 9 1 Y 1 A GLY 533 ? A GLY 134 10 1 Y 1 A ASP 534 ? A ASP 135 11 1 Y 1 A ASN 535 ? A ASN 136 12 1 Y 1 A HIS 536 ? A HIS 137 13 1 Y 1 A GLN 537 ? A GLN 138 14 1 Y 1 A SER 538 ? A SER 139 15 1 Y 1 A ILE 539 ? A ILE 140 16 1 Y 1 A LYS 540 ? A LYS 141 17 1 Y 1 A SER 541 ? A SER 142 18 1 Y 1 A GLN 542 ? A GLN 143 19 1 Y 1 A THR 631 ? A THR 232 20 1 Y 1 A PHE 632 ? A PHE 233 21 1 Y 1 A VAL 633 ? A VAL 234 22 1 Y 1 A LYS 634 ? A LYS 235 23 1 Y 1 A ASN 635 ? A ASN 236 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM42498 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Hg derivative' # _atom_sites.entry_id 5U32 _atom_sites.fract_transf_matrix[1][1] 0.020022 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017761 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012137 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_