HEADER OXYGEN TRANSPORT 02-DEC-16 5U3I
TITLE CRYSTAL STRUCTURE OF CARBONMONOXY HEMOGLOBIN S (LIGANDED SICKLE CELL
TITLE 2 HEMOGLOBIN) COMPLEXED WITH GBT COMPOUND 31
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HEMOGLOBIN SUBUNIT ALPHA;
COMPND 3 CHAIN: A, C;
COMPND 4 SYNONYM: ALPHA-GLOBIN,HEMOGLOBIN ALPHA CHAIN;
COMPND 5 MOL_ID: 2;
COMPND 6 MOLECULE: HEMOGLOBIN SUBUNIT BETA;
COMPND 7 CHAIN: B, D;
COMPND 8 SYNONYM: BETA-GLOBIN,HEMOGLOBIN BETA CHAIN;
COMPND 9 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 MOL_ID: 2;
SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 7 ORGANISM_COMMON: HUMAN;
SOURCE 8 ORGANISM_TAXID: 9606
KEYWDS R2 QUATERNARY STATE, OXYGEN TRANSPORT
EXPDTA X-RAY DIFFRACTION
AUTHOR J.R.PARTRIDGE,R.M.CHOY,Z.LI,B.METCALF
REVDAT 4 04-OCT-23 5U3I 1 LINK
REVDAT 3 27-NOV-19 5U3I 1 REMARK
REVDAT 2 12-APR-17 5U3I 1 JRNL
REVDAT 1 22-FEB-17 5U3I 0
JRNL AUTH B.METCALF,C.CHUANG,K.DUFU,M.P.PATEL,A.SILVA-GARCIA,
JRNL AUTH 2 C.JOHNSON,Q.LU,J.R.PARTRIDGE,L.PATSKOVSKA,Y.PATSKOVSKY,
JRNL AUTH 3 S.C.ALMO,M.P.JACOBSON,L.HUA,Q.XU,S.L.GWALTNEY,C.YEE,
JRNL AUTH 4 J.HARRIS,B.P.MORGAN,J.JAMES,D.XU,A.HUTCHALEELAHA,
JRNL AUTH 5 K.PAULVANNAN,D.OKSENBERG,Z.LI
JRNL TITL DISCOVERY OF GBT440, AN ORALLY BIOAVAILABLE R-STATE
JRNL TITL 2 STABILIZER OF SICKLE CELL HEMOGLOBIN.
JRNL REF ACS MED CHEM LETT V. 8 321 2017
JRNL REFN ISSN 1948-5875
JRNL PMID 28337324
JRNL DOI 10.1021/ACSMEDCHEMLETT.6B00491
REMARK 2
REMARK 2 RESOLUTION. 1.95 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (1.10.1_2155)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.81
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 3 NUMBER OF REFLECTIONS : 43667
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.208
REMARK 3 R VALUE (WORKING SET) : 0.206
REMARK 3 FREE R VALUE : 0.253
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.590
REMARK 3 FREE R VALUE TEST SET COUNT : 2003
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 29.8083 - 4.6941 1.00 3195 153 0.1607 0.2030
REMARK 3 2 4.6941 - 3.7281 1.00 3035 145 0.1658 0.2111
REMARK 3 3 3.7281 - 3.2575 1.00 3014 143 0.2069 0.2626
REMARK 3 4 3.2575 - 2.9600 1.00 2975 148 0.2431 0.2757
REMARK 3 5 2.9600 - 2.7480 1.00 2978 138 0.2467 0.2814
REMARK 3 6 2.7480 - 2.5861 1.00 2949 148 0.2553 0.3200
REMARK 3 7 2.5861 - 2.4566 1.00 2961 139 0.2438 0.2915
REMARK 3 8 2.4566 - 2.3497 1.00 2945 144 0.2485 0.2831
REMARK 3 9 2.3497 - 2.2593 1.00 2966 149 0.2678 0.3318
REMARK 3 10 2.2593 - 2.1814 1.00 2922 135 0.2749 0.3209
REMARK 3 11 2.1814 - 2.1132 1.00 2902 138 0.2840 0.3283
REMARK 3 12 2.1132 - 2.0528 1.00 2935 137 0.3152 0.3710
REMARK 3 13 2.0528 - 1.9988 1.00 2969 141 0.3398 0.4349
REMARK 3 14 1.9988 - 1.9500 1.00 2918 145 0.3469 0.3802
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.980
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 48.57
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.009 4739
REMARK 3 ANGLE : 0.971 6506
REMARK 3 CHIRALITY : 0.045 705
REMARK 3 PLANARITY : 0.006 811
REMARK 3 DIHEDRAL : 15.534 2690
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 1
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: ALL
REMARK 3 ORIGIN FOR THE GROUP (A): 16.8883 -2.5457 -21.6640
REMARK 3 T TENSOR
REMARK 3 T11: 0.2906 T22: 0.2821
REMARK 3 T33: 0.4237 T12: -0.0402
REMARK 3 T13: 0.0953 T23: 0.0456
REMARK 3 L TENSOR
REMARK 3 L11: 2.1171 L22: 3.7542
REMARK 3 L33: 9.9408 L12: 0.6146
REMARK 3 L13: 0.8858 L23: 3.8759
REMARK 3 S TENSOR
REMARK 3 S11: 0.0555 S12: -0.1106 S13: 0.2133
REMARK 3 S21: 0.5324 S22: -0.2851 S23: 0.3433
REMARK 3 S31: 0.8970 S32: -0.2368 S33: 0.0889
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5U3I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-DEC-16.
REMARK 100 THE DEPOSITION ID IS D_1000225259.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 19-OCT-16
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ALS
REMARK 200 BEAMLINE : 8.3.1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.11
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43683
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950
REMARK 200 RESOLUTION RANGE LOW (A) : 30.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 200 DATA REDUNDANCY : 12.80
REMARK 200 R MERGE (I) : 0.06000
REMARK 200 R SYM (I) : 0.06000
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 13.40
REMARK 200 R MERGE FOR SHELL (I) : 1.70000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 5E83
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 47.83
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.4 20 MM NACL 30 %
REMARK 280 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.69250
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.31850
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.52000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.31850
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.69250
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.52000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 11960 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 23350 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 VAL D 1
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 N VAL A 1 C06 7SJ A 203 0.47
REMARK 500 N VAL A 1 H1 7SJ A 203 1.42
REMARK 500 FE HEM D 201 C CMO D 202 1.46
REMARK 500 FE HEM C 201 C CMO C 202 1.68
REMARK 500 CA VAL A 1 C06 7SJ A 203 1.70
REMARK 500 N VAL A 1 C05 7SJ A 203 1.79
REMARK 500 FE HEM A 201 C CMO A 202 1.83
REMARK 500 FE HEM B 201 C CMO B 202 1.96
REMARK 500 NZ LYS C 7 OD1 ASP C 74 2.12
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 LEU C 29 CB - CG - CD2 ANGL. DEV. = -16.1 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 75 42.03 -141.29
REMARK 500 LEU A 113 56.07 -145.59
REMARK 500 GLU B 22 -34.12 -134.29
REMARK 500 ASP C 75 51.00 -145.67
REMARK 500 LEU C 113 59.32 -119.65
REMARK 500
REMARK 500 REMARK: NULL
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 7SJ A 203
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 HEM A 201 FE
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 87 NE2
REMARK 620 2 HEM A 201 NA 93.9
REMARK 620 3 HEM A 201 NB 103.9 84.5
REMARK 620 4 HEM A 201 NC 84.9 176.9 93.0
REMARK 620 5 HEM A 201 ND 75.1 94.2 178.4 88.2
REMARK 620 6 CMO A 202 O 176.3 86.6 79.8 94.8 101.2
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 HEM B 201 FE
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS B 92 NE2
REMARK 620 2 HEM B 201 NA 85.6
REMARK 620 3 HEM B 201 NB 86.4 90.4
REMARK 620 4 HEM B 201 NC 90.2 175.7 88.1
REMARK 620 5 HEM B 201 ND 90.5 88.9 176.9 92.4
REMARK 620 N 1 2 3 4
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 HEM C 201 FE
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS C 87 NE2
REMARK 620 2 HEM C 201 NA 87.4
REMARK 620 3 HEM C 201 NB 90.8 92.1
REMARK 620 4 HEM C 201 NC 98.7 173.8 87.6
REMARK 620 5 HEM C 201 ND 99.5 87.2 169.6 92.0
REMARK 620 6 CMO C 202 O 161.6 94.8 70.9 79.2 98.9
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 HEM D 201 FE
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS D 92 NE2
REMARK 620 2 HEM D 201 NA 77.7
REMARK 620 3 HEM D 201 NB 85.0 88.7
REMARK 620 4 HEM D 201 NC 96.1 173.5 88.6
REMARK 620 5 HEM D 201 ND 91.8 90.4 176.8 92.0
REMARK 620 6 CMO D 202 O 174.3 96.6 95.1 89.6 88.1
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CMO A 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 7SJ A 203
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CMO B 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue HEM C 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CMO C 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue HEM D 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CMO D 202
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5UFJ RELATED DB: PDB
DBREF 5U3I A 1 141 UNP P69905 HBA_HUMAN 2 142
DBREF 5U3I B 1 146 UNP P68871 HBB_HUMAN 2 147
DBREF 5U3I C 1 141 UNP P69905 HBA_HUMAN 2 142
DBREF 5U3I D 1 146 UNP P68871 HBB_HUMAN 2 147
SEQADV 5U3I VAL B 6 UNP P68871 GLU 7 ENGINEERED MUTATION
SEQADV 5U3I VAL D 6 UNP P68871 GLU 7 ENGINEERED MUTATION
SEQRES 1 A 141 VAL LEU SER PRO ALA ASP LYS THR ASN VAL LYS ALA ALA
SEQRES 2 A 141 TRP GLY LYS VAL GLY ALA HIS ALA GLY GLU TYR GLY ALA
SEQRES 3 A 141 GLU ALA LEU GLU ARG MET PHE LEU SER PHE PRO THR THR
SEQRES 4 A 141 LYS THR TYR PHE PRO HIS PHE ASP LEU SER HIS GLY SER
SEQRES 5 A 141 ALA GLN VAL LYS GLY HIS GLY LYS LYS VAL ALA ASP ALA
SEQRES 6 A 141 LEU THR ASN ALA VAL ALA HIS VAL ASP ASP MET PRO ASN
SEQRES 7 A 141 ALA LEU SER ALA LEU SER ASP LEU HIS ALA HIS LYS LEU
SEQRES 8 A 141 ARG VAL ASP PRO VAL ASN PHE LYS LEU LEU SER HIS CYS
SEQRES 9 A 141 LEU LEU VAL THR LEU ALA ALA HIS LEU PRO ALA GLU PHE
SEQRES 10 A 141 THR PRO ALA VAL HIS ALA SER LEU ASP LYS PHE LEU ALA
SEQRES 11 A 141 SER VAL SER THR VAL LEU THR SER LYS TYR ARG
SEQRES 1 B 146 VAL HIS LEU THR PRO VAL GLU LYS SER ALA VAL THR ALA
SEQRES 2 B 146 LEU TRP GLY LYS VAL ASN VAL ASP GLU VAL GLY GLY GLU
SEQRES 3 B 146 ALA LEU GLY ARG LEU LEU VAL VAL TYR PRO TRP THR GLN
SEQRES 4 B 146 ARG PHE PHE GLU SER PHE GLY ASP LEU SER THR PRO ASP
SEQRES 5 B 146 ALA VAL MET GLY ASN PRO LYS VAL LYS ALA HIS GLY LYS
SEQRES 6 B 146 LYS VAL LEU GLY ALA PHE SER ASP GLY LEU ALA HIS LEU
SEQRES 7 B 146 ASP ASN LEU LYS GLY THR PHE ALA THR LEU SER GLU LEU
SEQRES 8 B 146 HIS CYS ASP LYS LEU HIS VAL ASP PRO GLU ASN PHE ARG
SEQRES 9 B 146 LEU LEU GLY ASN VAL LEU VAL CYS VAL LEU ALA HIS HIS
SEQRES 10 B 146 PHE GLY LYS GLU PHE THR PRO PRO VAL GLN ALA ALA TYR
SEQRES 11 B 146 GLN LYS VAL VAL ALA GLY VAL ALA ASN ALA LEU ALA HIS
SEQRES 12 B 146 LYS TYR HIS
SEQRES 1 C 141 VAL LEU SER PRO ALA ASP LYS THR ASN VAL LYS ALA ALA
SEQRES 2 C 141 TRP GLY LYS VAL GLY ALA HIS ALA GLY GLU TYR GLY ALA
SEQRES 3 C 141 GLU ALA LEU GLU ARG MET PHE LEU SER PHE PRO THR THR
SEQRES 4 C 141 LYS THR TYR PHE PRO HIS PHE ASP LEU SER HIS GLY SER
SEQRES 5 C 141 ALA GLN VAL LYS GLY HIS GLY LYS LYS VAL ALA ASP ALA
SEQRES 6 C 141 LEU THR ASN ALA VAL ALA HIS VAL ASP ASP MET PRO ASN
SEQRES 7 C 141 ALA LEU SER ALA LEU SER ASP LEU HIS ALA HIS LYS LEU
SEQRES 8 C 141 ARG VAL ASP PRO VAL ASN PHE LYS LEU LEU SER HIS CYS
SEQRES 9 C 141 LEU LEU VAL THR LEU ALA ALA HIS LEU PRO ALA GLU PHE
SEQRES 10 C 141 THR PRO ALA VAL HIS ALA SER LEU ASP LYS PHE LEU ALA
SEQRES 11 C 141 SER VAL SER THR VAL LEU THR SER LYS TYR ARG
SEQRES 1 D 146 VAL HIS LEU THR PRO VAL GLU LYS SER ALA VAL THR ALA
SEQRES 2 D 146 LEU TRP GLY LYS VAL ASN VAL ASP GLU VAL GLY GLY GLU
SEQRES 3 D 146 ALA LEU GLY ARG LEU LEU VAL VAL TYR PRO TRP THR GLN
SEQRES 4 D 146 ARG PHE PHE GLU SER PHE GLY ASP LEU SER THR PRO ASP
SEQRES 5 D 146 ALA VAL MET GLY ASN PRO LYS VAL LYS ALA HIS GLY LYS
SEQRES 6 D 146 LYS VAL LEU GLY ALA PHE SER ASP GLY LEU ALA HIS LEU
SEQRES 7 D 146 ASP ASN LEU LYS GLY THR PHE ALA THR LEU SER GLU LEU
SEQRES 8 D 146 HIS CYS ASP LYS LEU HIS VAL ASP PRO GLU ASN PHE ARG
SEQRES 9 D 146 LEU LEU GLY ASN VAL LEU VAL CYS VAL LEU ALA HIS HIS
SEQRES 10 D 146 PHE GLY LYS GLU PHE THR PRO PRO VAL GLN ALA ALA TYR
SEQRES 11 D 146 GLN LYS VAL VAL ALA GLY VAL ALA ASN ALA LEU ALA HIS
SEQRES 12 D 146 LYS TYR HIS
HET HEM A 201 43
HET CMO A 202 2
HET 7SJ A 203 45
HET HEM B 201 43
HET CMO B 202 2
HET HEM C 201 43
HET CMO C 202 2
HET HEM D 201 43
HET CMO D 202 2
HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE
HETNAM CMO CARBON MONOXIDE
HETNAM 7SJ 2-METHOXY-5-({2-[1-(PROPAN-2-YL)-1H-PYRAZOL-5-
HETNAM 2 7SJ YL]PYRIDIN-3-YL}METHOXY)PYRIDINE-4-CARBALDEHYDE
HETSYN HEM HEME
FORMUL 5 HEM 4(C34 H32 FE N4 O4)
FORMUL 6 CMO 4(C O)
FORMUL 7 7SJ C19 H20 N4 O3
FORMUL 14 HOH *55(H2 O)
HELIX 1 AA1 SER A 3 LYS A 16 1 14
HELIX 2 AA2 VAL A 17 ALA A 19 5 3
HELIX 3 AA3 HIS A 20 PHE A 36 1 17
HELIX 4 AA4 PRO A 37 PHE A 43 5 7
HELIX 5 AA5 SER A 52 HIS A 72 1 21
HELIX 6 AA6 ASP A 75 LEU A 80 1 6
HELIX 7 AA7 LEU A 80 ALA A 88 1 9
HELIX 8 AA8 ASP A 94 LEU A 113 1 20
HELIX 9 AA9 THR A 118 SER A 138 1 21
HELIX 10 AB1 THR B 4 GLY B 16 1 13
HELIX 11 AB2 GLU B 22 TYR B 35 1 14
HELIX 12 AB3 PRO B 36 GLY B 46 5 11
HELIX 13 AB4 THR B 50 GLY B 56 1 7
HELIX 14 AB5 ASN B 57 ALA B 76 1 20
HELIX 15 AB6 HIS B 77 ASP B 79 5 3
HELIX 16 AB7 ASN B 80 PHE B 85 1 6
HELIX 17 AB8 PHE B 85 ASP B 94 1 10
HELIX 18 AB9 PRO B 100 GLY B 119 1 20
HELIX 19 AC1 LYS B 120 PHE B 122 5 3
HELIX 20 AC2 THR B 123 ALA B 142 1 20
HELIX 21 AC3 HIS B 143 HIS B 146 5 4
HELIX 22 AC4 SER C 3 GLY C 18 1 16
HELIX 23 AC5 HIS C 20 PHE C 36 1 17
HELIX 24 AC6 PRO C 37 PHE C 43 5 7
HELIX 25 AC7 SER C 52 HIS C 72 1 21
HELIX 26 AC8 ASP C 75 LEU C 80 1 6
HELIX 27 AC9 LEU C 80 HIS C 89 1 10
HELIX 28 AD1 ASP C 94 LEU C 113 1 20
HELIX 29 AD2 THR C 118 SER C 138 1 21
HELIX 30 AD3 THR D 4 VAL D 18 1 15
HELIX 31 AD4 GLU D 22 TYR D 35 1 14
HELIX 32 AD5 PRO D 36 GLY D 46 5 11
HELIX 33 AD6 THR D 50 ASN D 57 1 8
HELIX 34 AD7 ASN D 57 HIS D 77 1 21
HELIX 35 AD8 ASN D 80 PHE D 85 1 6
HELIX 36 AD9 PHE D 85 LYS D 95 1 11
HELIX 37 AE1 PRO D 100 GLY D 119 1 20
HELIX 38 AE2 LYS D 120 PHE D 122 5 3
HELIX 39 AE3 THR D 123 ALA D 142 1 20
HELIX 40 AE4 HIS D 143 HIS D 146 5 4
LINK NE2 HIS A 87 FE HEM A 201 1555 1555 2.33
LINK FE HEM A 201 O CMO A 202 1555 1555 2.76
LINK NE2 HIS B 92 FE HEM B 201 1555 1555 2.31
LINK NE2 HIS C 87 FE HEM C 201 1555 1555 2.26
LINK FE HEM C 201 O CMO C 202 1555 1555 2.73
LINK NE2 HIS D 92 FE HEM D 201 1555 1555 2.43
LINK FE HEM D 201 O CMO D 202 1555 1555 2.55
SITE 1 AC1 16 TYR A 42 PHE A 43 HIS A 45 PHE A 46
SITE 2 AC1 16 HIS A 58 LYS A 61 ALA A 65 LEU A 66
SITE 3 AC1 16 LEU A 83 HIS A 87 LEU A 91 ASN A 97
SITE 4 AC1 16 PHE A 98 LEU A 101 LEU A 136 CMO A 202
SITE 1 AC2 3 HIS A 58 VAL A 62 HEM A 201
SITE 1 AC3 9 VAL A 1 LEU A 2 ALA A 130 SER A 131
SITE 2 AC3 9 THR A 134 VAL C 1 SER C 131 VAL C 135
SITE 3 AC3 9 SER C 138
SITE 1 AC4 12 PHE B 41 PHE B 42 HIS B 63 VAL B 67
SITE 2 AC4 12 ALA B 70 PHE B 71 HIS B 92 ASN B 102
SITE 3 AC4 12 PHE B 103 LEU B 106 LEU B 141 CMO B 202
SITE 1 AC5 3 PHE B 42 HIS B 63 HEM B 201
SITE 1 AC6 15 TYR C 42 PHE C 43 HIS C 45 HIS C 58
SITE 2 AC6 15 LYS C 61 VAL C 62 LEU C 86 HIS C 87
SITE 3 AC6 15 LEU C 91 ASN C 97 PHE C 98 LEU C 101
SITE 4 AC6 15 LEU C 136 CMO C 202 HOH C 305
SITE 1 AC7 3 HIS C 58 VAL C 62 HEM C 201
SITE 1 AC8 12 PHE D 41 PHE D 45 HIS D 63 LYS D 66
SITE 2 AC8 12 VAL D 67 HIS D 92 LEU D 96 ASN D 102
SITE 3 AC8 12 PHE D 103 LEU D 106 LEU D 141 CMO D 202
SITE 1 AC9 2 HIS D 63 HEM D 201
CRYST1 57.385 59.040 172.637 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017426 0.000000 0.000000 0.00000
SCALE2 0.000000 0.016938 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005793 0.00000