HEADER HYDROLASE/IMMUNE SYSTEM 05-DEC-16 5U4M TITLE RTA-V1C7-G29R-NO_SALT COMPND MOL_ID: 1; COMPND 2 MOLECULE: RICIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 40-294; COMPND 5 EC: 3.2.2.22; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: V1C7 VHH ANTIBODY; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS; SOURCE 3 ORGANISM_COMMON: CASTOR BEAN; SOURCE 4 ORGANISM_TAXID: 3988; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 9 ORGANISM_COMMON: ALPACA; SOURCE 10 ORGANISM_TAXID: 30538; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RICIN A CHAIN, VHH CAMELID ANTIBODY, HYDROLASE-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.J.RUDOLPH,N.MANTIS REVDAT 3 11-DEC-19 5U4M 1 REMARK REVDAT 2 26-DEC-18 5U4M 1 JRNL REVDAT 1 13-DEC-17 5U4M 0 JRNL AUTH A.BAZZOLI,D.J.VANCE,M.J.RUDOLPH,Y.RONG,S.K.ANGALAKURTHI, JRNL AUTH 2 R.T.TOTH 4TH.,C.R.MIDDAUGH,D.B.VOLKIN,D.D.WEIS, JRNL AUTH 3 J.KARANICOLAS,N.J.MANTIS JRNL TITL USING HOMOLOGY MODELING TO INTERROGATE BINDING AFFINITY IN JRNL TITL 2 NEUTRALIZATION OF RICIN TOXIN BY A FAMILY OF SINGLE DOMAIN JRNL TITL 3 ANTIBODIES. JRNL REF PROTEINS V. 85 1994 2017 JRNL REFN ESSN 1097-0134 JRNL PMID 28718923 JRNL DOI 10.1002/PROT.25353 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 945 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.8460 - 4.7813 1.00 2764 135 0.1781 0.1949 REMARK 3 2 4.7813 - 3.7955 1.00 2626 117 0.1557 0.2010 REMARK 3 3 3.7955 - 3.3158 1.00 2599 117 0.2256 0.2756 REMARK 3 4 3.3158 - 3.0127 1.00 2527 150 0.2457 0.3248 REMARK 3 5 3.0127 - 2.7968 1.00 2518 154 0.2715 0.3190 REMARK 3 6 2.7968 - 2.6319 1.00 2518 135 0.2819 0.3535 REMARK 3 7 2.6319 - 2.5001 1.00 2493 137 0.2879 0.3429 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 36.60 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.650 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.000 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.65650 REMARK 3 B22 (A**2) : 7.65650 REMARK 3 B33 (A**2) : -15.31310 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3080 REMARK 3 ANGLE : 0.753 4181 REMARK 3 CHIRALITY : 0.056 457 REMARK 3 PLANARITY : 0.003 550 REMARK 3 DIHEDRAL : 13.016 1113 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 5:17) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0443 94.0642 225.4404 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 1.0446 REMARK 3 T33: 0.6582 T12: -0.0252 REMARK 3 T13: 0.0209 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 7.4584 L22: 7.0591 REMARK 3 L33: 5.5611 L12: -0.8683 REMARK 3 L13: 0.0844 L23: 0.8029 REMARK 3 S TENSOR REMARK 3 S11: 0.0633 S12: -0.0423 S13: -0.9500 REMARK 3 S21: 0.0753 S22: -0.9897 S23: 0.4344 REMARK 3 S31: 0.2886 S32: -0.6428 S33: 0.1045 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 18:32) REMARK 3 ORIGIN FOR THE GROUP (A): 27.4007 100.9268 231.6802 REMARK 3 T TENSOR REMARK 3 T11: 0.5532 T22: 1.3141 REMARK 3 T33: 0.4073 T12: 0.2224 REMARK 3 T13: 0.1225 T23: 0.0477 REMARK 3 L TENSOR REMARK 3 L11: 7.1608 L22: 3.6255 REMARK 3 L33: 8.4042 L12: -1.3938 REMARK 3 L13: 4.5865 L23: -1.6023 REMARK 3 S TENSOR REMARK 3 S11: -0.3391 S12: -1.2229 S13: -0.7840 REMARK 3 S21: 0.4288 S22: 0.2727 S23: 0.4876 REMARK 3 S31: -1.0629 S32: -0.7905 S33: -0.0398 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 33:56) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7996 92.0219 243.3213 REMARK 3 T TENSOR REMARK 3 T11: 1.0420 T22: 0.9834 REMARK 3 T33: 0.4882 T12: -0.1866 REMARK 3 T13: 0.0475 T23: 0.1725 REMARK 3 L TENSOR REMARK 3 L11: 1.8187 L22: 4.1346 REMARK 3 L33: 5.7652 L12: 2.4779 REMARK 3 L13: 1.8062 L23: 4.5035 REMARK 3 S TENSOR REMARK 3 S11: 0.5685 S12: -0.3706 S13: 0.0040 REMARK 3 S21: 2.0207 S22: -0.5536 S23: 0.2296 REMARK 3 S31: 0.6460 S32: -0.3051 S33: 0.0697 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 57:97) REMARK 3 ORIGIN FOR THE GROUP (A): 35.7698 89.1725 223.1685 REMARK 3 T TENSOR REMARK 3 T11: 0.4056 T22: 0.8601 REMARK 3 T33: 0.3051 T12: 0.0641 REMARK 3 T13: 0.0235 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 3.0831 L22: 7.0322 REMARK 3 L33: 5.3121 L12: -1.4098 REMARK 3 L13: 2.5105 L23: -2.3843 REMARK 3 S TENSOR REMARK 3 S11: 0.0653 S12: -0.4620 S13: -0.2114 REMARK 3 S21: 0.1664 S22: -0.1005 S23: -0.0926 REMARK 3 S31: 0.2245 S32: -0.6243 S33: 0.0231 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 98:140) REMARK 3 ORIGIN FOR THE GROUP (A): 44.2058 90.1903 221.8975 REMARK 3 T TENSOR REMARK 3 T11: 0.3312 T22: 0.6032 REMARK 3 T33: 0.3773 T12: 0.1699 REMARK 3 T13: -0.0547 T23: 0.0650 REMARK 3 L TENSOR REMARK 3 L11: 2.8388 L22: 5.2603 REMARK 3 L33: 6.3191 L12: 1.6496 REMARK 3 L13: -1.2610 L23: -0.9982 REMARK 3 S TENSOR REMARK 3 S11: -0.1151 S12: -0.0419 S13: -0.4910 REMARK 3 S21: 0.5347 S22: 0.1757 S23: -0.5735 REMARK 3 S31: 0.3557 S32: -0.1104 S33: -0.0494 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 141:174) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7741 96.0533 214.2090 REMARK 3 T TENSOR REMARK 3 T11: 0.3754 T22: 0.6540 REMARK 3 T33: 0.2683 T12: 0.1459 REMARK 3 T13: 0.0212 T23: 0.0895 REMARK 3 L TENSOR REMARK 3 L11: 4.9890 L22: 5.4976 REMARK 3 L33: 4.6724 L12: -0.6852 REMARK 3 L13: 1.9035 L23: 3.3077 REMARK 3 S TENSOR REMARK 3 S11: 0.2696 S12: 0.1295 S13: -0.0235 REMARK 3 S21: -0.4808 S22: -0.3937 S23: 0.3378 REMARK 3 S31: -0.3153 S32: -1.1659 S33: 0.1163 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 175:193) REMARK 3 ORIGIN FOR THE GROUP (A): 34.8084 107.6083 228.7026 REMARK 3 T TENSOR REMARK 3 T11: 0.5382 T22: 0.9336 REMARK 3 T33: 0.3068 T12: 0.2360 REMARK 3 T13: 0.0227 T23: -0.0491 REMARK 3 L TENSOR REMARK 3 L11: 3.8976 L22: 4.9678 REMARK 3 L33: 4.4779 L12: 2.6124 REMARK 3 L13: 3.3832 L23: 0.3375 REMARK 3 S TENSOR REMARK 3 S11: -0.0429 S12: -0.4053 S13: 0.5220 REMARK 3 S21: -0.0438 S22: -0.4866 S23: 0.3822 REMARK 3 S31: -0.5295 S32: -1.3673 S33: 0.3577 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 194:248) REMARK 3 ORIGIN FOR THE GROUP (A): 46.0822 110.2079 235.8430 REMARK 3 T TENSOR REMARK 3 T11: 0.3922 T22: 0.8060 REMARK 3 T33: 0.3430 T12: 0.2610 REMARK 3 T13: 0.0288 T23: 0.1066 REMARK 3 L TENSOR REMARK 3 L11: 2.2520 L22: 3.5794 REMARK 3 L33: 4.6306 L12: 2.9182 REMARK 3 L13: 0.2708 L23: 1.8588 REMARK 3 S TENSOR REMARK 3 S11: -0.0526 S12: -0.2634 S13: 0.1805 REMARK 3 S21: 0.1221 S22: -0.4647 S23: -0.4806 REMARK 3 S31: -0.2939 S32: 0.2417 S33: 0.4476 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 249:259) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6227 101.1531 242.0338 REMARK 3 T TENSOR REMARK 3 T11: 0.6904 T22: 0.8578 REMARK 3 T33: 0.3645 T12: 0.1508 REMARK 3 T13: 0.0400 T23: 0.1525 REMARK 3 L TENSOR REMARK 3 L11: 6.6025 L22: 2.0271 REMARK 3 L33: 1.9372 L12: -0.1575 REMARK 3 L13: -0.3632 L23: 1.4651 REMARK 3 S TENSOR REMARK 3 S11: 0.3208 S12: -0.5836 S13: -0.4754 REMARK 3 S21: 1.2233 S22: -0.8076 S23: 0.4521 REMARK 3 S31: 0.5581 S32: 0.0891 S33: 0.3407 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ -1:12) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8244 99.7938 189.5959 REMARK 3 T TENSOR REMARK 3 T11: 1.0472 T22: 1.0886 REMARK 3 T33: 0.2957 T12: 0.0371 REMARK 3 T13: -0.1596 T23: -0.1999 REMARK 3 L TENSOR REMARK 3 L11: 7.4255 L22: 5.6547 REMARK 3 L33: 6.7853 L12: 3.8483 REMARK 3 L13: -4.2905 L23: -4.0450 REMARK 3 S TENSOR REMARK 3 S11: -0.3207 S12: 0.3777 S13: 0.1832 REMARK 3 S21: -1.4047 S22: 0.5053 S23: 0.8304 REMARK 3 S31: -0.0545 S32: -0.1108 S33: 0.1314 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 13:24) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4465 111.5706 186.8509 REMARK 3 T TENSOR REMARK 3 T11: 1.2532 T22: 1.0898 REMARK 3 T33: 0.5299 T12: -0.0793 REMARK 3 T13: -0.2173 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 2.8166 L22: 5.5465 REMARK 3 L33: 4.1651 L12: 0.5959 REMARK 3 L13: -0.5837 L23: -4.8102 REMARK 3 S TENSOR REMARK 3 S11: -1.5183 S12: 2.1955 S13: 0.9572 REMARK 3 S21: -1.0344 S22: 1.2227 S23: 0.5427 REMARK 3 S31: -1.2000 S32: -0.7671 S33: -0.2353 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 25:42) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0465 99.2269 197.7939 REMARK 3 T TENSOR REMARK 3 T11: 0.7862 T22: 0.8359 REMARK 3 T33: 0.3656 T12: 0.0923 REMARK 3 T13: -0.0647 T23: -0.0982 REMARK 3 L TENSOR REMARK 3 L11: 6.7913 L22: 4.0178 REMARK 3 L33: 1.2705 L12: 2.3482 REMARK 3 L13: 0.2933 L23: 1.9354 REMARK 3 S TENSOR REMARK 3 S11: -0.3292 S12: 0.2744 S13: -0.3673 REMARK 3 S21: -0.6322 S22: -0.1108 S23: 0.0834 REMARK 3 S31: 0.6809 S32: 0.2839 S33: 0.3251 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 43:54) REMARK 3 ORIGIN FOR THE GROUP (A): 43.3543 102.0305 192.7343 REMARK 3 T TENSOR REMARK 3 T11: 0.8386 T22: 1.1822 REMARK 3 T33: 0.6255 T12: 0.2293 REMARK 3 T13: 0.0664 T23: -0.1664 REMARK 3 L TENSOR REMARK 3 L11: 2.7277 L22: 5.0613 REMARK 3 L33: 2.9262 L12: -1.1572 REMARK 3 L13: 0.7084 L23: 3.2634 REMARK 3 S TENSOR REMARK 3 S11: -0.1298 S12: 0.5172 S13: -1.0406 REMARK 3 S21: 0.3733 S22: 0.5166 S23: -0.7178 REMARK 3 S31: -0.1502 S32: 0.7929 S33: 0.1274 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 55:87) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4961 110.2256 198.7822 REMARK 3 T TENSOR REMARK 3 T11: 0.7945 T22: 0.7035 REMARK 3 T33: 0.4918 T12: 0.2268 REMARK 3 T13: -0.1675 T23: -0.0404 REMARK 3 L TENSOR REMARK 3 L11: 7.0553 L22: 5.4994 REMARK 3 L33: 6.0124 L12: 4.8431 REMARK 3 L13: 2.3527 L23: 3.1976 REMARK 3 S TENSOR REMARK 3 S11: -1.6316 S12: -0.1058 S13: 0.3967 REMARK 3 S21: -1.1531 S22: 0.8758 S23: 0.1676 REMARK 3 S31: -0.8673 S32: -0.0439 S33: 0.6963 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 88:127) REMARK 3 ORIGIN FOR THE GROUP (A): 37.9344 102.6190 192.8240 REMARK 3 T TENSOR REMARK 3 T11: 0.6377 T22: 0.9123 REMARK 3 T33: 0.3671 T12: 0.1308 REMARK 3 T13: 0.0693 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 3.3663 L22: 7.2525 REMARK 3 L33: 8.1617 L12: 2.4702 REMARK 3 L13: 0.5921 L23: -2.6086 REMARK 3 S TENSOR REMARK 3 S11: -0.4005 S12: 0.1475 S13: -0.1189 REMARK 3 S21: -0.9413 S22: 0.2412 S23: -0.5980 REMARK 3 S31: 0.0648 S32: 1.0531 S33: 0.1626 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U4M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000225324. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19235 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.73900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 4000 AND 100 MM SODIUM ACETATE REMARK 280 PH 4.6, VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 143.61267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.80633 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 71.80633 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 143.61267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 301 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 404 O HOH A 437 1.86 REMARK 500 NH1 ARG A 85 OD1 ASP A 110 2.12 REMARK 500 NH2 ARG A 166 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 41 -7.87 86.01 REMARK 500 SER B 7 -177.81 -173.68 REMARK 500 ALA B 96 173.33 175.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5U4L RELATED DB: PDB DBREF 5U4M A 5 259 UNP P02879 RICI_RICCO 40 294 DBREF 5U4M B -1 127 PDB 5U4M 5U4M -1 127 SEQRES 1 A 255 GLN TYR PRO ILE ILE ASN PHE THR THR ALA GLY ALA THR SEQRES 2 A 255 VAL GLN SER TYR THR ASN PHE ILE ARG ALA VAL ARG GLY SEQRES 3 A 255 ARG LEU THR THR GLY ALA ASP VAL ARG HIS GLU ILE PRO SEQRES 4 A 255 VAL LEU PRO ASN ARG VAL GLY LEU PRO ILE ASN GLN ARG SEQRES 5 A 255 PHE ILE LEU VAL GLU LEU SER ASN HIS ALA GLU LEU SER SEQRES 6 A 255 VAL THR LEU ALA LEU ASP VAL THR ASN ALA TYR VAL VAL SEQRES 7 A 255 GLY TYR ARG ALA GLY ASN SER ALA TYR PHE PHE HIS PRO SEQRES 8 A 255 ASP ASN GLN GLU ASP ALA GLU ALA ILE THR HIS LEU PHE SEQRES 9 A 255 THR ASP VAL GLN ASN ARG TYR THR PHE ALA PHE GLY GLY SEQRES 10 A 255 ASN TYR ASP ARG LEU GLU GLN LEU ALA GLY ASN LEU ARG SEQRES 11 A 255 GLU ASN ILE GLU LEU GLY ASN GLY PRO LEU GLU GLU ALA SEQRES 12 A 255 ILE SER ALA LEU TYR TYR TYR SER THR GLY GLY THR GLN SEQRES 13 A 255 LEU PRO THR LEU ALA ARG SER PHE ILE ILE CYS ILE GLN SEQRES 14 A 255 MET ILE SER GLU ALA ALA ARG PHE GLN TYR ILE GLU GLY SEQRES 15 A 255 GLU MET ARG THR ARG ILE ARG TYR ASN ARG ARG SER ALA SEQRES 16 A 255 PRO ASP PRO SER VAL ILE THR LEU GLU ASN SER TRP GLY SEQRES 17 A 255 ARG LEU SER THR ALA ILE GLN GLU SER ASN GLN GLY ALA SEQRES 18 A 255 PHE ALA SER PRO ILE GLN LEU GLN ARG ARG ASN GLY SER SEQRES 19 A 255 LYS PHE SER VAL TYR ASP VAL SER ILE LEU ILE PRO ILE SEQRES 20 A 255 ILE ALA LEU MET VAL TYR ARG CYS SEQRES 1 B 129 ASN ALA GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU SEQRES 2 B 129 VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS VAL ALA SEQRES 3 B 129 SER GLU PHE SER ARG PHE THR LEU ASP TYR TYR ALA ILE SEQRES 4 B 129 GLY TRP PHE ARG GLN ALA PRO GLY LYS GLU ARG GLU GLY SEQRES 5 B 129 LEU SER SER ILE SER SER SER SER ASP GLY PHE THR SER SEQRES 6 B 129 TYR SER ASP SER VAL LYS GLY ARG PHE THR ILE SER ARG SEQRES 7 B 129 ASP ASN ALA LYS ASN THR VAL TYR LEU GLN MET ASN SER SEQRES 8 B 129 LEU LYS PRO GLU ASP THR ALA VAL TYR TYR CYS ALA ALA SEQRES 9 B 129 ARG LEU GLY GLY TRP ALA SER PHE SER PRO GLN GLU TYR SEQRES 10 B 129 ASP TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER HET CL A 301 1 HETNAM CL CHLORIDE ION FORMUL 3 CL CL 1- FORMUL 4 HOH *47(H2 O) HELIX 1 AA1 THR A 17 THR A 33 1 17 HELIX 2 AA2 PRO A 52 GLN A 55 5 4 HELIX 3 AA3 ASN A 97 THR A 105 1 9 HELIX 4 AA4 ASN A 122 GLY A 131 1 10 HELIX 5 AA5 LEU A 133 ILE A 137 5 5 HELIX 6 AA6 GLY A 140 SER A 155 1 16 HELIX 7 AA7 GLN A 160 PHE A 181 1 22 HELIX 8 AA8 PHE A 181 TYR A 194 1 14 HELIX 9 AA9 ASP A 201 GLU A 220 1 20 HELIX 10 AB1 VAL A 245 ILE A 249 1 5 HELIX 11 AB2 THR B 31 ASP B 33 5 3 HELIX 12 AB3 LYS B 91 THR B 95 5 5 HELIX 13 AB4 SER B 111 TYR B 115 5 5 SHEET 1 AA1 6 ILE A 8 THR A 12 0 SHEET 2 AA1 6 PHE A 57 SER A 63 1 O GLU A 61 N PHE A 11 SHEET 3 AA1 6 SER A 69 ASP A 75 -1 O VAL A 70 N LEU A 62 SHEET 4 AA1 6 VAL A 81 ALA A 86 -1 O VAL A 82 N ALA A 73 SHEET 5 AA1 6 SER A 89 PHE A 92 -1 O SER A 89 N ALA A 86 SHEET 6 AA1 6 ASN A 113 THR A 116 1 O ASN A 113 N ALA A 90 SHEET 1 AA2 2 VAL A 38 ARG A 39 0 SHEET 2 AA2 2 ILE A 42 PRO A 43 -1 O ILE A 42 N ARG A 39 SHEET 1 AA3 2 ALA A 225 GLN A 233 0 SHEET 2 AA3 2 LYS A 239 ASP A 244 -1 O PHE A 240 N LEU A 232 SHEET 1 AA4 4 LEU B 4 SER B 7 0 SHEET 2 AA4 4 LEU B 18 ALA B 24 -1 O VAL B 23 N VAL B 5 SHEET 3 AA4 4 THR B 82 MET B 87 -1 O MET B 87 N LEU B 18 SHEET 4 AA4 4 PHE B 72 ASP B 77 -1 N ASP B 77 O THR B 82 SHEET 1 AA5 6 GLY B 10 VAL B 12 0 SHEET 2 AA5 6 THR B 122 VAL B 126 1 O THR B 125 N VAL B 12 SHEET 3 AA5 6 ALA B 96 LEU B 104 -1 N TYR B 98 O THR B 122 SHEET 4 AA5 6 TYR B 35 GLN B 42 -1 N PHE B 40 O TYR B 99 SHEET 5 AA5 6 GLU B 49 ILE B 54 -1 O LEU B 51 N TRP B 39 SHEET 6 AA5 6 THR B 62 TYR B 64 -1 O SER B 63 N SER B 53 SHEET 1 AA6 4 GLY B 10 VAL B 12 0 SHEET 2 AA6 4 THR B 122 VAL B 126 1 O THR B 125 N VAL B 12 SHEET 3 AA6 4 ALA B 96 LEU B 104 -1 N TYR B 98 O THR B 122 SHEET 4 AA6 4 TYR B 117 TRP B 118 -1 O TYR B 117 N ALA B 102 SSBOND 1 CYS B 22 CYS B 100 1555 1555 2.04 CISPEP 1 THR A 33 THR A 34 0 -3.43 SITE 1 AC1 1 ALA A 118 CRYST1 64.912 64.912 215.419 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015405 0.008894 0.000000 0.00000 SCALE2 0.000000 0.017789 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004642 0.00000