HEADER HYDROLASE 06-DEC-16 5U4U TITLE PSEUDOGTPASE DOMAIN (PG1) OF P190RHOGAP-A COMPND MOL_ID: 1; COMPND 2 MOLECULE: MGC81300 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 587-762; COMPND 5 SYNONYM: P190RHOGAP-A; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 GENE: ARHGAP35, MGC81300; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET32 MODIFIED KEYWDS GTPASE, PSEUDOGTPASE, G DOMAIN, RHO, GAP, ARHGAP5, ARHGAP35, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.L.STIEGLER,T.J.BOGGON REVDAT 4 04-OCT-23 5U4U 1 REMARK REVDAT 3 18-DEC-19 5U4U 1 REMARK REVDAT 2 27-SEP-17 5U4U 1 JRNL REVDAT 1 20-SEP-17 5U4U 0 JRNL AUTH A.L.STIEGLER,T.J.BOGGON JRNL TITL P190RHOGAP PROTEINS CONTAIN PSEUDOGTPASE DOMAINS. JRNL REF NAT COMMUN V. 8 506 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28894085 JRNL DOI 10.1038/S41467-017-00483-X REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15634 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 802 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1000 - 3.4523 1.00 2663 148 0.1664 0.1836 REMARK 3 2 3.4523 - 2.7403 1.00 2492 131 0.1704 0.2129 REMARK 3 3 2.7403 - 2.3939 1.00 2452 144 0.1805 0.2014 REMARK 3 4 2.3939 - 2.1751 1.00 2424 117 0.1788 0.2524 REMARK 3 5 2.1751 - 2.0192 1.00 2408 145 0.2077 0.2718 REMARK 3 6 2.0192 - 1.9001 1.00 2393 117 0.2766 0.3575 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1323 REMARK 3 ANGLE : 0.952 1789 REMARK 3 CHIRALITY : 0.043 209 REMARK 3 PLANARITY : 0.003 237 REMARK 3 DIHEDRAL : 11.641 512 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 586 THROUGH 602 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8620 31.4061 4.1563 REMARK 3 T TENSOR REMARK 3 T11: 0.1822 T22: 0.1153 REMARK 3 T33: 0.1491 T12: -0.0234 REMARK 3 T13: 0.0156 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 9.6897 L22: 2.4398 REMARK 3 L33: 3.8455 L12: -1.3750 REMARK 3 L13: -2.3871 L23: 0.6690 REMARK 3 S TENSOR REMARK 3 S11: -0.2970 S12: 0.4448 S13: -0.6198 REMARK 3 S21: 0.0152 S22: 0.1765 S23: -0.0102 REMARK 3 S31: 0.4930 S32: 0.0517 S33: -0.0426 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 603 THROUGH 654 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3105 31.1569 2.5099 REMARK 3 T TENSOR REMARK 3 T11: 0.2676 T22: 0.1512 REMARK 3 T33: 0.2447 T12: 0.0055 REMARK 3 T13: 0.0179 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 2.9287 L22: 2.6424 REMARK 3 L33: 3.2570 L12: 1.0950 REMARK 3 L13: -0.5022 L23: -0.9718 REMARK 3 S TENSOR REMARK 3 S11: -0.0875 S12: 0.0356 S13: -0.3451 REMARK 3 S21: -0.2180 S22: -0.0167 S23: -0.1817 REMARK 3 S31: 0.4967 S32: 0.0152 S33: 0.0582 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 655 THROUGH 742 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.2495 38.5439 14.1944 REMARK 3 T TENSOR REMARK 3 T11: 0.1268 T22: 0.1740 REMARK 3 T33: 0.1887 T12: -0.0340 REMARK 3 T13: 0.0065 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 3.7879 L22: 2.4535 REMARK 3 L33: 4.1395 L12: 0.8641 REMARK 3 L13: -1.1637 L23: 0.3046 REMARK 3 S TENSOR REMARK 3 S11: -0.1135 S12: 0.2170 S13: 0.0864 REMARK 3 S21: -0.0204 S22: 0.0277 S23: 0.1903 REMARK 3 S31: 0.0923 S32: -0.2861 S33: 0.0070 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 743 THROUGH 762 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9747 38.3421 11.3240 REMARK 3 T TENSOR REMARK 3 T11: 0.2371 T22: 0.1784 REMARK 3 T33: 0.2644 T12: 0.0120 REMARK 3 T13: -0.0029 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 1.8116 L22: 2.8110 REMARK 3 L33: 5.3016 L12: -1.4469 REMARK 3 L13: 2.0195 L23: -0.8936 REMARK 3 S TENSOR REMARK 3 S11: 0.0775 S12: -0.0988 S13: -0.1367 REMARK 3 S21: -0.0126 S22: 0.0284 S23: -0.2413 REMARK 3 S31: 0.5165 S32: 0.2167 S33: 0.0338 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U4U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000224796. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15922 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.01800 REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3IHW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7-1.8 M LITHIUM SULFATE, 0.1 M N-(2 REMARK 280 -ACETAMIDO)IMINODIACETIC ACID (ADA), PH 6.3, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.34467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.67233 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 80.50850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 26.83617 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 134.18083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 107.34467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 53.67233 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 26.83617 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 80.50850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 134.18083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 678 REMARK 465 SER A 679 REMARK 465 SER A 680 REMARK 465 LEU A 681 REMARK 465 GLY A 682 REMARK 465 ARG A 683 REMARK 465 LYS A 684 REMARK 465 GLU A 685 REMARK 465 ASN A 686 REMARK 465 HIS A 687 REMARK 465 ARG A 701 REMARK 465 GLY A 702 REMARK 465 ASP A 703 REMARK 465 THR A 704 REMARK 465 SER A 705 REMARK 465 SER A 706 REMARK 465 GLU A 707 REMARK 465 GLY A 734 REMARK 465 LEU A 735 REMARK 465 GLY A 736 REMARK 465 TYR A 737 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 954 O HOH A 979 2.15 REMARK 500 O HOH A 951 O HOH A 968 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 618 30.73 -96.62 REMARK 500 ASN A 661 19.48 -153.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 805 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 586 OG REMARK 620 2 ASP A 587 O 98.9 REMARK 620 3 VAL A 590 O 113.2 74.1 REMARK 620 4 HOH A 955 O 157.8 95.9 86.8 REMARK 620 5 HOH A 958 O 88.8 168.7 110.6 74.4 REMARK 620 6 HOH A 964 O 79.1 97.4 165.7 82.7 75.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 804 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 631 OG REMARK 620 2 MLI A 802 O8 46.7 REMARK 620 3 HOH A 953 O 85.9 95.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 803 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 632 O REMARK 620 2 MLI A 801 O7 97.1 REMARK 620 3 MLI A 801 O9 100.0 77.2 REMARK 620 4 MLI A 802 O6 92.1 96.0 166.7 REMARK 620 5 HOH A 957 O 166.9 93.0 90.3 78.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLI A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLI A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 805 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5U4V RELATED DB: PDB DBREF 5U4U A 587 762 UNP Q6NU25 Q6NU25_XENLA 587 762 SEQADV 5U4U GLY A 585 UNP Q6NU25 EXPRESSION TAG SEQADV 5U4U SER A 586 UNP Q6NU25 EXPRESSION TAG SEQRES 1 A 178 GLY SER ASP PRO ASN VAL ASP ARG ILE ASN LEU VAL ILE SEQRES 2 A 178 LEU GLY ARG ASP GLY LEU ALA ARG GLU LEU ALA ASN GLU SEQRES 3 A 178 ILE ARG ALA LEU CYS THR ASN ASP ASP LYS TYR VAL ILE SEQRES 4 A 178 ASP GLY LYS MET TYR GLU LEU SER LEU ARG PRO ILE GLU SEQRES 5 A 178 GLY ASN VAL ARG LEU PRO VAL ASN SER PHE GLN THR SER SEQRES 6 A 178 THR PHE GLN PRO HIS GLY CYS LEU CYS LEU TYR ASN SER SEQRES 7 A 178 LYS GLU SER LEU SER TYR VAL VAL GLU SER ILE GLU LYS SEQRES 8 A 178 SER ARG GLU SER SER LEU GLY ARG LYS GLU ASN HIS LEU SEQRES 9 A 178 ILE ASN LEU PRO LEU THR LEU ILE LEU VAL ASN ARG ARG SEQRES 10 A 178 GLY ASP THR SER SER GLU THR ALA HIS SER LEU ILE GLN SEQRES 11 A 178 HIS GLY GLN GLN VAL ALA SER LYS LEU GLN CYS VAL PHE SEQRES 12 A 178 LEU ASP ALA ALA SER THR GLY LEU GLY TYR GLY ARG ASN SEQRES 13 A 178 ILE ASN GLU LYS GLN ILE SER LEU ILE LEU ARG GLY LEU SEQRES 14 A 178 LEU GLU SER LYS ARG ASN LEU ASN LEU HET MLI A 801 7 HET MLI A 802 7 HET NA A 803 1 HET NA A 804 1 HET NA A 805 1 HETNAM MLI MALONATE ION HETNAM NA SODIUM ION FORMUL 2 MLI 2(C3 H2 O4 2-) FORMUL 4 NA 3(NA 1+) FORMUL 7 HOH *81(H2 O) HELIX 1 AA1 GLY A 602 LEU A 614 1 13 HELIX 2 AA2 LEU A 641 SER A 645 5 5 HELIX 3 AA3 SER A 662 ARG A 677 1 16 HELIX 4 AA4 ALA A 709 GLN A 724 1 16 HELIX 5 AA5 ASN A 742 ASN A 761 1 20 SHEET 1 AA1 6 LYS A 620 ILE A 623 0 SHEET 2 AA1 6 LYS A 626 ILE A 635 -1 O TYR A 628 N TYR A 621 SHEET 3 AA1 6 ARG A 592 LEU A 598 1 N ILE A 597 O ILE A 635 SHEET 4 AA1 6 GLY A 655 TYR A 660 1 O LEU A 659 N LEU A 598 SHEET 5 AA1 6 LEU A 693 LEU A 697 1 O ILE A 696 N CYS A 658 SHEET 6 AA1 6 VAL A 726 ASP A 729 1 O VAL A 726 N LEU A 695 LINK OG SER A 586 NA NA A 805 1555 1555 2.35 LINK O ASP A 587 NA NA A 805 1555 1555 2.34 LINK O VAL A 590 NA NA A 805 1555 1555 2.40 LINK OG BSER A 631 NA NA A 804 1555 1555 3.14 LINK O LEU A 632 NA NA A 803 1555 1555 2.34 LINK O7 MLI A 801 NA NA A 803 1555 1555 2.24 LINK O9 MLI A 801 NA NA A 803 1555 1555 2.49 LINK O6 MLI A 802 NA NA A 803 1555 1555 2.40 LINK O8 MLI A 802 NA NA A 804 1555 1555 2.75 LINK NA NA A 803 O HOH A 957 1555 1555 2.56 LINK NA NA A 804 O HOH A 953 1555 1555 2.94 LINK NA NA A 805 O HOH A 955 1555 1555 2.93 LINK NA NA A 805 O HOH A 958 1555 1555 2.34 LINK NA NA A 805 O HOH A 964 1555 1555 2.81 SITE 1 AC1 7 ARG A 612 LEU A 632 PRO A 634 MLI A 802 SITE 2 AC1 7 NA A 803 NA A 804 HOH A 911 SITE 1 AC2 8 SER A 631 LEU A 632 ARG A 633 PHE A 651 SITE 2 AC2 8 MLI A 801 NA A 803 NA A 804 HOH A 911 SITE 1 AC3 5 LEU A 632 MLI A 801 MLI A 802 NA A 804 SITE 2 AC3 5 HOH A 957 SITE 1 AC4 7 ARG A 612 SER A 631 LEU A 632 MLI A 801 SITE 2 AC4 7 MLI A 802 NA A 803 HOH A 953 SITE 1 AC5 6 SER A 586 ASP A 587 VAL A 590 HOH A 955 SITE 2 AC5 6 HOH A 958 HOH A 964 CRYST1 62.937 62.937 161.017 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015889 0.009173 0.000000 0.00000 SCALE2 0.000000 0.018347 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006211 0.00000