HEADER DE NOVO PROTEIN 06-DEC-16 5U5C TITLE COILED COIL PEPTIDE METAL COORDINATION FRAMEWORK: TETRAMER FOLD COMPND MOL_ID: 1; COMPND 2 MOLECULE: DESIGNED TETRAMERIC COILED COIL PEPTIDE WITH ONE COMPND 3 TERPYRIDINE SIDE CHAIN; COMPND 4 CHAIN: A, B, C, D, E, F; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS DESIGNED PEPTIDE, SYNTHETIC, METAL COORDINATION FRAMEWORK, KEYWDS 2 SUPRAMOLECULAR ASSEMBLY, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.A.TAVENOR,M.J.MURNIN,W.S.HORNE REVDAT 5 15-NOV-23 5U5C 1 LINK REVDAT 4 04-OCT-23 5U5C 1 LINK REVDAT 3 27-NOV-19 5U5C 1 REMARK REVDAT 2 20-SEP-17 5U5C 1 REMARK REVDAT 1 22-FEB-17 5U5C 0 JRNL AUTH N.A.TAVENOR,M.J.MURNIN,W.S.HORNE JRNL TITL SUPRAMOLECULAR METAL-COORDINATION POLYMERS, NETS, AND JRNL TITL 2 FRAMEWORKS FROM SYNTHETIC COILED-COIL PEPTIDES. JRNL REF J. AM. CHEM. SOC. V. 139 2212 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 28161945 JRNL DOI 10.1021/JACS.7B00651 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 11883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.265 REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1190 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.0942 - 4.3639 0.95 1246 138 0.2498 0.2255 REMARK 3 2 4.3639 - 3.4655 0.99 1210 132 0.2209 0.2136 REMARK 3 3 3.4655 - 3.0280 0.99 1196 136 0.2684 0.2973 REMARK 3 4 3.0280 - 2.7514 0.99 1172 135 0.2658 0.3595 REMARK 3 5 2.7514 - 2.5543 0.99 1172 127 0.3105 0.3536 REMARK 3 6 2.5543 - 2.4038 1.00 1187 132 0.2866 0.3235 REMARK 3 7 2.4038 - 2.2834 1.00 1180 131 0.3004 0.2985 REMARK 3 8 2.2834 - 2.1841 1.00 1163 129 0.3277 0.3465 REMARK 3 9 2.1841 - 2.1000 1.00 1167 130 0.3218 0.3114 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1504 REMARK 3 ANGLE : 0.881 2031 REMARK 3 CHIRALITY : 0.042 224 REMARK 3 PLANARITY : 0.002 243 REMARK 3 DIHEDRAL : 20.316 571 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U5C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000225341. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11924 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 29.091 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.370 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.42 REMARK 200 R MERGE FOR SHELL (I) : 0.38800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3R4A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.095 M BIS-TRIS PH 6.5, 9.5 MM REMARK 280 COPPER(II) CHLORIDE, 5 MM SODIUM CITRATE PH 5.6, 0.125 M 1,6- REMARK 280 HEXANEDIOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 57.14850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.32100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.14850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 19.32100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 228.59400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 115.92600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH F 211 O HOH F 212 0.08 REMARK 500 OE1 GLU A 7 O HOH A 201 1.50 REMARK 500 NZ LYS F 6 O HOH F 201 1.82 REMARK 500 O LYS D 27 O HOH D 201 1.98 REMARK 500 O HOH D 213 O HOH D 217 2.09 REMARK 500 OE1 GLU C 7 O HOH C 201 2.10 REMARK 500 O ILE F 26 NE2 GLN F 28 2.11 REMARK 500 O HOH E 209 O HOH E 219 2.13 REMARK 500 OE1 GLU E 7 O HOH E 202 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS D 27 -77.54 -66.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU E 103 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 1 OE2 REMARK 620 2 7WJ E 14 NT2 46.7 REMARK 620 3 7WJ E 14 NU1 42.8 4.1 REMARK 620 4 7WJ E 14 NU3 47.0 1.5 4.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU E 101 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 7WJ A 14 NT2 REMARK 620 2 7WJ A 14 NU1 79.6 REMARK 620 3 7WJ A 14 NU3 79.7 159.3 REMARK 620 4 GLU E 1 OE2 171.4 98.5 101.9 REMARK 620 5 HOH E 210 O 104.3 87.5 97.9 83.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 101 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 7WJ B 14 NT2 REMARK 620 2 7WJ B 14 NU1 79.9 REMARK 620 3 7WJ B 14 NU3 79.9 159.8 REMARK 620 4 HOH B 215 O 90.1 91.7 88.8 REMARK 620 5 GLU C 7 OE2 81.1 132.5 42.7 131.5 REMARK 620 6 HOH C 201 O 79.0 74.0 101.6 163.2 59.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU C 101 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 1 OE2 REMARK 620 2 7WJ C 14 NT2 94.0 REMARK 620 3 7WJ C 14 NU1 97.8 4.3 REMARK 620 4 7WJ C 14 NU3 90.2 3.9 8.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU D 101 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 1 OE2 REMARK 620 2 7WJ F 14 NT2 176.4 REMARK 620 3 7WJ F 14 NU1 99.5 80.0 REMARK 620 4 7WJ F 14 NU3 100.5 79.9 159.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU E 102 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 7WJ D 14 NT2 REMARK 620 2 7WJ D 14 NU1 79.9 REMARK 620 3 7WJ D 14 NU3 79.8 159.8 REMARK 620 4 HOH D 204 O 93.3 75.6 106.0 REMARK 620 5 GLU E 7 OE2 173.7 100.8 99.3 92.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEZ C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU E 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU E 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEZ E 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE B 0 and GLU B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LYS B 13 and 7WJ B REMARK 800 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 7WJ B 14 and GLU B REMARK 800 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLN B 28 and NH2 B REMARK 800 29 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE C 0 and GLU C 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LYS C 13 and 7WJ C REMARK 800 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 7WJ C 14 and GLU C REMARK 800 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLN C 28 and NH2 C REMARK 800 29 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE D 0 and GLU D 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LYS D 13 and 7WJ D REMARK 800 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 7WJ D 14 and GLU D REMARK 800 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLN D 28 and NH2 D REMARK 800 29 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE E 0 and GLU E 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LYS E 13 and 7WJ E REMARK 800 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 7WJ E 14 and GLU E REMARK 800 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLN E 28 and NH2 E REMARK 800 29 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE F 0 and GLU F 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LYS F 13 and 7WJ F REMARK 800 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 7WJ F 14 and GLU F REMARK 800 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLN F 28 and NH2 F REMARK 800 29 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5U59 RELATED DB: PDB REMARK 900 RELATED ID: 5U5A RELATED DB: PDB REMARK 900 RELATED ID: 5U5B RELATED DB: PDB DBREF 5U5C A 0 29 PDB 5U5C 5U5C 0 29 DBREF 5U5C B 0 29 PDB 5U5C 5U5C 0 29 DBREF 5U5C C 0 29 PDB 5U5C 5U5C 0 29 DBREF 5U5C D 0 29 PDB 5U5C 5U5C 0 29 DBREF 5U5C E 0 29 PDB 5U5C 5U5C 0 29 DBREF 5U5C F 0 29 PDB 5U5C 5U5C 0 29 SEQRES 1 A 30 ACE GLU LEU ALA ALA ILE LYS GLU GLU LEU ALA ALA ILE SEQRES 2 A 30 LYS 7WJ GLU LEU ALA ALA ILE LYS GLN GLU LEU ALA ALA SEQRES 3 A 30 ILE LYS GLN NH2 SEQRES 1 B 30 ACE GLU LEU ALA ALA ILE LYS GLU GLU LEU ALA ALA ILE SEQRES 2 B 30 LYS 7WJ GLU LEU ALA ALA ILE LYS GLN GLU LEU ALA ALA SEQRES 3 B 30 ILE LYS GLN NH2 SEQRES 1 C 30 ACE GLU LEU ALA ALA ILE LYS GLU GLU LEU ALA ALA ILE SEQRES 2 C 30 LYS 7WJ GLU LEU ALA ALA ILE LYS GLN GLU LEU ALA ALA SEQRES 3 C 30 ILE LYS GLN NH2 SEQRES 1 D 30 ACE GLU LEU ALA ALA ILE LYS GLU GLU LEU ALA ALA ILE SEQRES 2 D 30 LYS 7WJ GLU LEU ALA ALA ILE LYS GLN GLU LEU ALA ALA SEQRES 3 D 30 ILE LYS GLN NH2 SEQRES 1 E 30 ACE GLU LEU ALA ALA ILE LYS GLU GLU LEU ALA ALA ILE SEQRES 2 E 30 LYS 7WJ GLU LEU ALA ALA ILE LYS GLN GLU LEU ALA ALA SEQRES 3 E 30 ILE LYS GLN NH2 SEQRES 1 F 30 ACE GLU LEU ALA ALA ILE LYS GLU GLU LEU ALA ALA ILE SEQRES 2 F 30 LYS 7WJ GLU LEU ALA ALA ILE LYS GLN GLU LEU ALA ALA SEQRES 3 F 30 ILE LYS GLN NH2 HET ACE A 0 3 HET 7WJ A 14 27 HET NH2 A 29 1 HET ACE B 0 3 HET 7WJ B 14 27 HET NH2 B 29 1 HET ACE C 0 3 HET 7WJ C 14 27 HET NH2 C 29 1 HET ACE D 0 3 HET 7WJ D 14 27 HET NH2 D 29 1 HET ACE E 0 3 HET 7WJ E 14 27 HET NH2 E 29 1 HET ACE F 0 3 HET 7WJ F 14 27 HET NH2 F 29 1 HET CU B 101 1 HET CU C 101 1 HET HEZ C 102 8 HET CU D 101 1 HET CU E 101 1 HET CU E 102 1 HET CU E 103 1 HET HEZ E 104 8 HETNAM ACE ACETYL GROUP HETNAM 7WJ (2S)-2-AMINO-4-[([1~2~,2~2~:2~6~,3~2~-TERPYRIDINE]- HETNAM 2 7WJ 2~4~-CARBONYL)AMINO]BUTANOIC ACID HETNAM NH2 AMINO GROUP HETNAM CU COPPER (II) ION HETNAM HEZ HEXANE-1,6-DIOL FORMUL 1 ACE 6(C2 H4 O) FORMUL 1 7WJ 6(C20 H19 N5 O3) FORMUL 1 NH2 6(H2 N) FORMUL 7 CU 6(CU 2+) FORMUL 9 HEZ 2(C6 H14 O2) FORMUL 15 HOH *105(H2 O) HELIX 1 AA1 GLU A 1 GLN A 28 1 28 HELIX 2 AA2 GLU B 1 GLN B 28 1 28 HELIX 3 AA3 GLU C 1 GLN C 28 1 28 HELIX 4 AA4 GLU D 1 GLN D 28 1 28 HELIX 5 AA5 GLU E 1 GLN E 28 1 28 HELIX 6 AA6 GLU F 1 GLN F 28 1 28 LINK C ACE A 0 N GLU A 1 1555 1555 1.33 LINK C LYS A 13 N 7WJ A 14 1555 1555 1.33 LINK C 7WJ A 14 N GLU A 15 1555 1555 1.33 LINK C GLN A 28 N NH2 A 29 1555 1555 1.33 LINK C ACE B 0 N GLU B 1 1555 1555 1.33 LINK C LYS B 13 N 7WJ B 14 1555 1555 1.33 LINK C 7WJ B 14 N GLU B 15 1555 1555 1.33 LINK C GLN B 28 N NH2 B 29 1555 1555 1.33 LINK C ACE C 0 N GLU C 1 1555 1555 1.33 LINK C LYS C 13 N 7WJ C 14 1555 1555 1.33 LINK C 7WJ C 14 N GLU C 15 1555 1555 1.33 LINK C GLN C 28 N NH2 C 29 1555 1555 1.33 LINK C ACE D 0 N GLU D 1 1555 1555 1.33 LINK C LYS D 13 N 7WJ D 14 1555 1555 1.33 LINK C 7WJ D 14 N GLU D 15 1555 1555 1.33 LINK C GLN D 28 N NH2 D 29 1555 1555 1.33 LINK C ACE E 0 N GLU E 1 1555 1555 1.33 LINK C LYS E 13 N 7WJ E 14 1555 1555 1.33 LINK C 7WJ E 14 N GLU E 15 1555 1555 1.33 LINK C GLN E 28 N NH2 E 29 1555 1555 1.33 LINK C ACE F 0 N GLU F 1 1555 1555 1.33 LINK C LYS F 13 N 7WJ F 14 1555 1555 1.33 LINK C 7WJ F 14 N GLU F 15 1555 1555 1.33 LINK C GLN F 28 N NH2 F 29 1555 1555 1.33 LINK OE2 GLU A 1 CU CU E 103 1555 1545 1.90 LINK NT2 7WJ A 14 CU CU E 101 1555 1555 1.97 LINK NU1 7WJ A 14 CU CU E 101 1555 1555 2.18 LINK NU3 7WJ A 14 CU CU E 101 1555 1555 2.18 LINK NT2 7WJ B 14 CU CU B 101 1555 1555 1.96 LINK NU1 7WJ B 14 CU CU B 101 1555 1555 2.18 LINK NU3 7WJ B 14 CU CU B 101 1555 1555 2.18 LINK CU CU B 101 O HOH B 215 1555 1555 2.65 LINK CU CU B 101 OE2 GLU C 7 3755 1555 1.90 LINK CU CU B 101 O HOH C 201 1555 3745 2.27 LINK OE2 GLU C 1 CU CU C 101 1555 3755 1.90 LINK NT2 7WJ C 14 CU CU C 101 1555 1555 1.96 LINK NU1 7WJ C 14 CU CU C 101 1555 1555 2.18 LINK NU3 7WJ C 14 CU CU C 101 1555 1555 2.18 LINK OE2 GLU D 1 CU CU D 101 1555 1555 1.89 LINK NT2 7WJ D 14 CU CU E 102 1555 1555 1.96 LINK NU1 7WJ D 14 CU CU E 102 1555 1555 2.18 LINK NU3 7WJ D 14 CU CU E 102 1555 1555 2.18 LINK CU CU D 101 NT2 7WJ F 14 1555 1555 1.98 LINK CU CU D 101 NU1 7WJ F 14 1555 1555 2.19 LINK CU CU D 101 NU3 7WJ F 14 1555 1555 2.19 LINK O HOH D 204 CU CU E 102 1555 1555 2.16 LINK OE2 GLU E 1 CU CU E 101 1555 1555 1.90 LINK OE2 GLU E 7 CU CU E 102 1555 1555 1.90 LINK NT2 7WJ E 14 CU CU E 103 1555 1555 1.97 LINK NU1 7WJ E 14 CU CU E 103 1555 1555 2.18 LINK NU3 7WJ E 14 CU CU E 103 1555 1555 2.18 LINK CU CU E 101 O HOH E 210 1555 1555 2.16 SITE 1 AC1 4 7WJ B 14 HOH B 215 GLU C 7 HOH C 201 SITE 1 AC2 3 GLU C 1 7WJ C 14 LYS D 6 SITE 1 AC3 4 GLU A 1 LEU B 2 ILE C 26 LYS C 27 SITE 1 AC4 4 LYS A 6 GLU D 1 7WJ F 14 HOH F 213 SITE 1 AC5 4 7WJ A 14 GLU E 1 HOH E 210 LYS F 6 SITE 1 AC6 4 7WJ D 14 HOH D 204 GLU E 7 HOH E 202 SITE 1 AC7 4 GLU A 1 LYS B 6 HOH B 206 7WJ E 14 SITE 1 AC8 3 GLU E 1 ILE E 26 HOH E 201 SITE 1 AC9 7 LEU B 2 ALA B 3 ALA B 4 ILE B 5 SITE 2 AC9 7 ALA C 3 LYS C 6 GLN C 28 SITE 1 AD1 14 GLU A 8 LEU B 9 ALA B 10 ALA B 11 SITE 2 AD1 14 ILE B 12 GLU B 15 LEU B 16 ALA B 17 SITE 3 AD1 14 ALA B 18 CU B 101 HOH B 203 HOH B 209 SITE 4 AD1 14 GLU C 7 HOH C 201 SITE 1 AD2 15 ALA B 10 ALA B 11 ILE B 12 LYS B 13 SITE 2 AD2 15 LEU B 16 ALA B 17 ALA B 18 ILE B 19 SITE 3 AD2 15 CU B 101 HOH B 203 GLU C 7 LEU C 16 SITE 4 AD2 15 ALA C 17 LYS C 20 HOH C 201 SITE 1 AD3 8 GLU A 1 ALA B 24 ALA B 25 ILE B 26 SITE 2 AD3 8 LYS B 27 HOH B 206 7WJ E 14 GLN E 21 SITE 1 AD4 13 LEU C 2 ALA C 3 ALA C 4 ILE C 5 SITE 2 AD4 13 7WJ C 14 CU C 101 HOH C 204 LEU D 2 SITE 3 AD4 13 LYS D 6 LYS D 27 GLN D 28 NH2 D 29 SITE 4 AD4 13 HOH D 201 SITE 1 AD5 16 GLU B 8 ALA B 11 GLU C 1 LEU C 9 SITE 2 AD5 16 ALA C 10 ALA C 11 ILE C 12 GLU C 15 SITE 3 AD5 16 LEU C 16 ALA C 17 ALA C 18 CU C 101 SITE 4 AD5 16 HOH C 205 HOH C 207 LYS D 6 GLN D 28 SITE 1 AD6 15 GLU C 1 ALA C 10 ALA C 11 ILE C 12 SITE 2 AD6 15 LYS C 13 LEU C 16 ALA C 17 ALA C 18 SITE 3 AD6 15 ILE C 19 CU C 101 HOH C 205 HOH C 207 SITE 4 AD6 15 LYS D 6 LYS D 20 GLN D 28 SITE 1 AD7 8 ACE B 0 GLU B 1 LEU B 2 ALA C 24 SITE 2 AD7 8 ALA C 25 ILE C 26 LYS C 27 HOH C 202 SITE 1 AD8 15 LEU A 2 ALA A 3 LYS A 6 ILE A 26 SITE 2 AD8 15 LYS A 27 GLN A 28 NH2 A 29 HOH A 211 SITE 3 AD8 15 LEU D 2 ALA D 3 ALA D 4 ILE D 5 SITE 4 AD8 15 CU D 101 HOH D 203 7WJ F 14 SITE 1 AD9 13 GLU C 8 LEU D 9 ALA D 10 ALA D 11 SITE 2 AD9 13 ILE D 12 GLU D 15 LEU D 16 ALA D 17 SITE 3 AD9 13 ALA D 18 HOH D 204 GLU E 7 CU E 102 SITE 4 AD9 13 HOH E 202 SITE 1 AE1 16 LEU A 16 ALA A 17 LYS A 20 HOH A 208 SITE 2 AE1 16 ALA D 10 ALA D 11 ILE D 12 LYS D 13 SITE 3 AE1 16 LEU D 16 ALA D 17 ALA D 18 ILE D 19 SITE 4 AE1 16 HOH D 204 GLU E 7 CU E 102 HOH E 202 SITE 1 AE2 7 GLU C 1 7WJ C 14 ALA D 24 ALA D 25 SITE 2 AE2 7 ILE D 26 LYS D 27 HOH D 201 SITE 1 AE3 10 7WJ A 14 LEU E 2 ALA E 3 ALA E 4 SITE 2 AE3 10 ILE E 5 CU E 101 HEZ E 104 HOH E 210 SITE 3 AE3 10 LYS F 6 GLN F 28 SITE 1 AE4 14 GLU A 1 LYS B 6 GLN B 28 LEU E 9 SITE 2 AE4 14 ALA E 10 ALA E 11 ILE E 12 GLU E 15 SITE 3 AE4 14 LEU E 16 ALA E 17 ALA E 18 CU E 103 SITE 4 AE4 14 HOH E 208 HOH E 215 SITE 1 AE5 16 GLU A 1 LYS B 6 GLN B 28 ALA E 10 SITE 2 AE5 16 ALA E 11 ILE E 12 LYS E 13 LEU E 16 SITE 3 AE5 16 ALA E 17 ALA E 18 ILE E 19 CU E 103 SITE 4 AE5 16 HOH E 208 HOH E 209 HOH E 215 LYS F 20 SITE 1 AE6 7 ALA E 24 ALA E 25 ILE E 26 LYS E 27 SITE 2 AE6 7 HOH E 204 HOH E 205 HOH E 217 SITE 1 AE7 5 LEU F 2 ALA F 3 ALA F 4 ILE F 5 SITE 2 AE7 5 HOH F 203 SITE 1 AE8 15 ALA A 3 LYS A 6 GLN A 28 HOH A 211 SITE 2 AE8 15 GLU D 1 CU D 101 LEU F 9 ALA F 10 SITE 3 AE8 15 ALA F 11 ILE F 12 GLU F 15 LEU F 16 SITE 4 AE8 15 ALA F 17 ALA F 18 HOH F 208 SITE 1 AE9 15 ALA A 3 LYS A 6 GLN A 28 HOH A 211 SITE 2 AE9 15 GLU D 1 CU D 101 ALA F 10 ALA F 11 SITE 3 AE9 15 ILE F 12 LYS F 13 LEU F 16 ALA F 17 SITE 4 AE9 15 ALA F 18 ILE F 19 HOH F 214 SITE 1 AF1 9 GLN A 21 GLU E 1 HOH E 210 ALA F 24 SITE 2 AF1 9 ALA F 25 ILE F 26 LYS F 27 HOH F 211 SITE 3 AF1 9 HOH F 212 CRYST1 114.297 38.642 44.198 90.00 90.00 90.00 P 21 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008749 0.000000 0.000000 0.00000 SCALE2 0.000000 0.025878 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022626 0.00000 HETATM 1 C ACE A 0 125.640 36.904 -13.087 1.00 38.64 C HETATM 2 O ACE A 0 125.071 36.838 -11.998 1.00 39.72 O HETATM 3 CH3 ACE A 0 124.910 37.424 -14.321 1.00 40.83 C