data_5U66
#
_entry.id 5U66
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.381
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 5U66 pdb_00005u66 10.2210/pdb5u66/pdb
WWPDB D_1000225345 ? ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 5U66
_pdbx_database_status.recvd_initial_deposition_date 2016-12-07
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Ultsch, M.H.' 1 ?
'Eigenbrot, C.' 2 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country UK
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Protein Eng. Des. Sel.'
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 1741-0134
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 30
_citation.language ?
_citation.page_first 619
_citation.page_last 625
_citation.title
'3-2-1: Structural insights from stepwise shrinkage of a three-helix Fc-binding domain to a single helix.'
_citation.year 2017
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1093/protein/gzx029
_citation.pdbx_database_id_PubMed 28475752
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Ultsch, M.' 1 ?
primary 'Braisted, A.' 2 ?
primary 'Maun, H.R.' 3 ?
primary 'Eigenbrot, C.' 4 ?
#
_cell.entry_id 5U66
_cell.length_a 49.165
_cell.length_b 126.812
_cell.length_c 91.927
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 5U66
_symmetry.space_group_name_H-M 'C 2 2 21'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 20
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'STAPLED PEPTIDE FROM DOMAIN B OF PROTEIN A' 2040.327 1 ? ? ? ?
2 polymer man 'IgG1 fc derived from CD4-fc fusion' 23579.660 1 ? ? ? ?
3 branched man
;beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
;
1276.157 1 ? ? ? ?
4 water nat water 18.015 224 ? ? ? ?
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no yes '(SIN)FNM(85J)QQRRFY(85G)ALH' XFNMXQQRRFYXALH B ?
2 'polypeptide(L)' no no
;GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG
KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSL
;
;GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG
KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSL
;
A ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 SIN n
1 2 PHE n
1 3 ASN n
1 4 MET n
1 5 85J n
1 6 GLN n
1 7 GLN n
1 8 ARG n
1 9 ARG n
1 10 PHE n
1 11 TYR n
1 12 85G n
1 13 ALA n
1 14 LEU n
1 15 HIS n
2 1 GLY n
2 2 PRO n
2 3 SER n
2 4 VAL n
2 5 PHE n
2 6 LEU n
2 7 PHE n
2 8 PRO n
2 9 PRO n
2 10 LYS n
2 11 PRO n
2 12 LYS n
2 13 ASP n
2 14 THR n
2 15 LEU n
2 16 MET n
2 17 ILE n
2 18 SER n
2 19 ARG n
2 20 THR n
2 21 PRO n
2 22 GLU n
2 23 VAL n
2 24 THR n
2 25 CYS n
2 26 VAL n
2 27 VAL n
2 28 VAL n
2 29 ASP n
2 30 VAL n
2 31 SER n
2 32 HIS n
2 33 GLU n
2 34 ASP n
2 35 PRO n
2 36 GLU n
2 37 VAL n
2 38 LYS n
2 39 PHE n
2 40 ASN n
2 41 TRP n
2 42 TYR n
2 43 VAL n
2 44 ASP n
2 45 GLY n
2 46 VAL n
2 47 GLU n
2 48 VAL n
2 49 HIS n
2 50 ASN n
2 51 ALA n
2 52 LYS n
2 53 THR n
2 54 LYS n
2 55 PRO n
2 56 ARG n
2 57 GLU n
2 58 GLU n
2 59 GLN n
2 60 TYR n
2 61 ASN n
2 62 SER n
2 63 THR n
2 64 TYR n
2 65 ARG n
2 66 VAL n
2 67 VAL n
2 68 SER n
2 69 VAL n
2 70 LEU n
2 71 THR n
2 72 VAL n
2 73 LEU n
2 74 HIS n
2 75 GLN n
2 76 ASP n
2 77 TRP n
2 78 LEU n
2 79 ASN n
2 80 GLY n
2 81 LYS n
2 82 GLU n
2 83 TYR n
2 84 LYS n
2 85 CYS n
2 86 LYS n
2 87 VAL n
2 88 SER n
2 89 ASN n
2 90 LYS n
2 91 ALA n
2 92 LEU n
2 93 PRO n
2 94 ALA n
2 95 PRO n
2 96 ILE n
2 97 GLU n
2 98 LYS n
2 99 THR n
2 100 ILE n
2 101 SER n
2 102 LYS n
2 103 ALA n
2 104 LYS n
2 105 GLY n
2 106 GLN n
2 107 PRO n
2 108 ARG n
2 109 GLU n
2 110 PRO n
2 111 GLN n
2 112 VAL n
2 113 TYR n
2 114 THR n
2 115 LEU n
2 116 PRO n
2 117 PRO n
2 118 SER n
2 119 ARG n
2 120 GLU n
2 121 GLU n
2 122 MET n
2 123 THR n
2 124 LYS n
2 125 ASN n
2 126 GLN n
2 127 VAL n
2 128 SER n
2 129 LEU n
2 130 THR n
2 131 CYS n
2 132 LEU n
2 133 VAL n
2 134 LYS n
2 135 GLY n
2 136 PHE n
2 137 TYR n
2 138 PRO n
2 139 SER n
2 140 ASP n
2 141 ILE n
2 142 ALA n
2 143 VAL n
2 144 GLU n
2 145 TRP n
2 146 GLU n
2 147 SER n
2 148 ASN n
2 149 GLY n
2 150 GLN n
2 151 PRO n
2 152 GLU n
2 153 ASN n
2 154 ASN n
2 155 TYR n
2 156 LYS n
2 157 THR n
2 158 THR n
2 159 PRO n
2 160 PRO n
2 161 VAL n
2 162 LEU n
2 163 ASP n
2 164 SER n
2 165 ASP n
2 166 GLY n
2 167 SER n
2 168 PHE n
2 169 PHE n
2 170 LEU n
2 171 TYR n
2 172 SER n
2 173 LYS n
2 174 LEU n
2 175 THR n
2 176 VAL n
2 177 ASP n
2 178 LYS n
2 179 SER n
2 180 ARG n
2 181 TRP n
2 182 GLN n
2 183 GLN n
2 184 GLY n
2 185 ASN n
2 186 VAL n
2 187 PHE n
2 188 SER n
2 189 CYS n
2 190 SER n
2 191 VAL n
2 192 MET n
2 193 HIS n
2 194 GLU n
2 195 ALA n
2 196 LEU n
2 197 HIS n
2 198 ASN n
2 199 HIS n
2 200 TYR n
2 201 THR n
2 202 GLN n
2 203 LYS n
2 204 SER n
2 205 LEU n
2 206 SER n
2 207 LEU n
#
_entity_src_gen.entity_id 2
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type 'Biological sequence'
_entity_src_gen.pdbx_beg_seq_num 1
_entity_src_gen.pdbx_end_seq_num 207
_entity_src_gen.gene_src_common_name Human
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene DKFZp686C11235
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Cricetulus griseus'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 10029
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 15
_pdbx_entity_src_syn.organism_scientific 'Staphylococcus aureus'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 1280
_pdbx_entity_src_syn.details ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
1 PDB 5U66 5U66 ? 1 ? 1
2 UNP Q6MZV7_HUMAN Q6MZV7 ? 2
;GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG
KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSL
;
263
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 5U66 B 1 ? 15 ? 5U66 5000 ? 5014 ? 5000 5014
2 2 5U66 A 1 ? 207 ? Q6MZV7 263 ? 469 ? 237 443
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
85G 'L-peptide linking' . N-ethyl-L-glutamine ? 'C7 H14 N2 O3' 174.198
85J 'L-peptide linking' . N-propyl-L-glutamine ? 'C8 H16 N2 O3' 188.224
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6'
180.156
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose'
'C6 H12 O6' 180.156
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6'
180.156
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose
;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
;
'C8 H15 N O6' 221.208
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
SIN non-polymer . 'SUCCINIC ACID' ? 'C4 H6 O4' 118.088
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 5U66
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 2.80
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 56.01
_exptl_crystal.description Blocks.
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 7.2
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details
;20% PEG 4000, 0.1M HEPES pH 7.2,
5mg/mL protein concentration.
;
_exptl_crystal_grow.pdbx_pH_range 7.0-7.5
#
loop_
_diffrn.ambient_environment
_diffrn.ambient_temp
_diffrn.ambient_temp_details
_diffrn.ambient_temp_esd
_diffrn.crystal_id
_diffrn.crystal_support
_diffrn.crystal_treatment
_diffrn.details
_diffrn.id
_diffrn.ambient_pressure
_diffrn.ambient_pressure_esd
_diffrn.ambient_pressure_gt
_diffrn.ambient_pressure_lt
_diffrn.ambient_temp_gt
_diffrn.ambient_temp_lt
? 80 ? ? 1 ? ? ? 1 ? ? ? ? ? ?
? 80 ? ? 1 ? ? ? 2 ? ? ? ? ? ?
#
loop_
_diffrn_detector.details
_diffrn_detector.detector
_diffrn_detector.diffrn_id
_diffrn_detector.type
_diffrn_detector.area_resol_mean
_diffrn_detector.dtime
_diffrn_detector.pdbx_frames_total
_diffrn_detector.pdbx_collection_time_total
_diffrn_detector.pdbx_collection_date
? CCD 1 'MARMOSAIC 300 mm CCD' ? ? ? ? 1997-05-15
? CCD 2 'MARMOSAIC 300 mm CCD' ? ? ? ? 1997-04-19
#
loop_
_diffrn_radiation.collimation
_diffrn_radiation.diffrn_id
_diffrn_radiation.filter_edge
_diffrn_radiation.inhomogeneity
_diffrn_radiation.monochromator
_diffrn_radiation.polarisn_norm
_diffrn_radiation.polarisn_ratio
_diffrn_radiation.probe
_diffrn_radiation.type
_diffrn_radiation.xray_symbol
_diffrn_radiation.wavelength_id
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l
_diffrn_radiation.pdbx_wavelength_list
_diffrn_radiation.pdbx_wavelength
_diffrn_radiation.pdbx_diffrn_protocol
_diffrn_radiation.pdbx_analyzer
_diffrn_radiation.pdbx_scattering_type
? 1 ? ? ? ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray
? 2 ? ? ? ? ? ? ? ? 2 M ? ? 'SINGLE WAVELENGTH' ? x-ray
#
loop_
_diffrn_radiation_wavelength.id
_diffrn_radiation_wavelength.wavelength
_diffrn_radiation_wavelength.wt
1 0.98 1.0
2 1.0 1.0
#
loop_
_diffrn_source.current
_diffrn_source.details
_diffrn_source.diffrn_id
_diffrn_source.power
_diffrn_source.size
_diffrn_source.source
_diffrn_source.target
_diffrn_source.type
_diffrn_source.voltage
_diffrn_source.take-off_angle
_diffrn_source.pdbx_wavelength_list
_diffrn_source.pdbx_wavelength
_diffrn_source.pdbx_synchrotron_beamline
_diffrn_source.pdbx_synchrotron_site
? ? 1 ? ? SYNCHROTRON ? 'SSRL BEAMLINE BL7-1' ? ? 0.98 ? BL7-1 SSRL
? ? 2 ? ? 'ROTATING ANODE' ? 'RIGAKU RU300' ? ? 1.0 ? ? ?
#
_reflns.pdbx_diffrn_id 1,2
_reflns.pdbx_ordinal 1
_reflns.entry_id 5U66
_reflns.observed_criterion_sigma_I 2.000
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 41.000
_reflns.d_resolution_high 1.700
_reflns.number_obs 29486
_reflns.number_all ?
_reflns.percent_possible_obs 96.4
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value 0.07400
_reflns.pdbx_netI_over_sigmaI 29.8000
_reflns.B_iso_Wilson_estimate 18.20
_reflns.pdbx_redundancy 5.700
#
_reflns_shell.pdbx_diffrn_id 1,2
_reflns_shell.pdbx_ordinal 1
_reflns_shell.d_res_high 1.70
_reflns_shell.d_res_low 1.73
_reflns_shell.percent_possible_all 93.2
_reflns_shell.Rmerge_I_obs 0.22900
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 4.700
_reflns_shell.pdbx_redundancy 3.10
#
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.entry_id 5U66
_refine.pdbx_diffrn_id 1,2
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs 26544
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 41.02
_refine.ls_d_res_high 1.70
_refine.ls_percent_reflns_obs 92.3
_refine.ls_R_factor_obs 0.164
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.157
_refine.ls_R_factor_R_free 0.227
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 10.000
_refine.ls_number_reflns_R_free 2942
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.968
_refine.correlation_coeff_Fo_to_Fc_free 0.934
_refine.B_iso_mean 35.31
_refine.aniso_B[1][1] -0.83000
_refine.aniso_B[2][2] 0.36000
_refine.aniso_B[3][3] 0.47000
_refine.aniso_B[1][2] 0.00000
_refine.aniso_B[1][3] 0.00000
_refine.aniso_B[2][3] 0.00000
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details
;HYDROGENS HAVE BEEN ADDED IN THE RIDING
POSITIONS
;
_refine.pdbx_starting_model 5U52
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.150
_refine.pdbx_overall_ESU_R_Free 0.116
_refine.overall_SU_ML 0.075
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B 5.143
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1802
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 86
_refine_hist.number_atoms_solvent 224
_refine_hist.number_atoms_total 2112
_refine_hist.d_res_high 1.70
_refine_hist.d_res_low 41.02
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.019 0.019 ? 1942 'X-RAY DIFFRACTION' ?
r_bond_other_d 0.002 0.020 ? 1800 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 1.964 2.013 ? 2637 'X-RAY DIFFRACTION' ?
r_angle_other_deg 3.847 3.000 ? 4188 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg 6.722 5.000 ? 215 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg 35.350 24.588 ? 85 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg 13.807 15.000 ? 313 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg 19.009 15.000 ? 8 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.128 0.200 ? 304 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.014 0.021 ? 2050 'X-RAY DIFFRACTION' ?
r_gen_planes_other 0.003 0.020 ? 414 'X-RAY DIFFRACTION' ?
r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_it 5.954 2.136 ? 881 'X-RAY DIFFRACTION' ?
r_mcbond_other 5.950 2.134 ? 880 'X-RAY DIFFRACTION' ?
r_mcangle_it 7.425 3.214 ? 1088 'X-RAY DIFFRACTION' ?
r_mcangle_other 7.424 3.216 ? 1089 'X-RAY DIFFRACTION' ?
r_scbond_it 6.967 2.819 ? 1061 'X-RAY DIFFRACTION' ?
r_scbond_other 6.968 2.821 ? 1062 'X-RAY DIFFRACTION' ?
r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
r_scangle_other 8.310 4.057 ? 1549 'X-RAY DIFFRACTION' ?
r_long_range_B_refined 8.697 28.479 ? 2027 'X-RAY DIFFRACTION' ?
r_long_range_B_other 8.695 28.501 ? 2028 'X-RAY DIFFRACTION' ?
r_rigid_bond_restr 4.661 3.000 ? 3740 'X-RAY DIFFRACTION' ?
r_sphericity_free 31.501 5.000 ? 154 'X-RAY DIFFRACTION' ?
r_sphericity_bonded 25.131 5.000 ? 3759 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 1.70
_refine_ls_shell.d_res_low 1.75
_refine_ls_shell.number_reflns_R_work 1645
_refine_ls_shell.R_factor_R_work 0.1780
_refine_ls_shell.percent_reflns_obs 79.15
_refine_ls_shell.R_factor_R_free 0.2620
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 208
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
#
_struct.entry_id 5U66
_struct.title 'Modified single helix from the B-domain of protein A bound to IgG1 Fc'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 5U66
_struct_keywords.text 'IgG1 Fc, staple peptide, Protein A, B-domain, immune system-inhibitor complex'
_struct_keywords.pdbx_keywords 'immune system/inhibitor'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 4 ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 ASN A 3 ? ALA A 13 ? ASN B 5002 ALA B 5012 1 ? 11
HELX_P HELX_P2 AA2 LYS B 10 ? MET B 16 ? LYS A 246 MET A 252 1 ? 7
HELX_P HELX_P3 AA3 LEU B 73 ? ASN B 79 ? LEU A 309 ASN A 315 1 ? 7
HELX_P HELX_P4 AA4 SER B 118 ? LYS B 124 ? SER A 354 LYS A 360 5 ? 7
HELX_P HELX_P5 AA5 LYS B 178 ? GLN B 183 ? LYS A 414 GLN A 419 1 ? 6
HELX_P HELX_P6 AA6 LEU B 196 ? ASN B 198 ? LEU A 432 ASN A 434 5 ? 3
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 85 SG ? ? A CYS 261 A CYS 321 1_555 ? ? ? ? ? ? ? 2.030 ? ?
disulf2 disulf ? ? B CYS 131 SG ? ? ? 1_555 B CYS 189 SG ? ? A CYS 367 A CYS 425 1_555 ? ? ? ? ? ? ? 2.051 ? ?
covale1 covale both ? A SIN 1 C1 ? ? ? 1_555 A PHE 2 N ? ? B SIN 5000 B PHE 5001 1_555 ? ? ? ? ? ? ? 1.336 ? ?
covale2 covale both ? A MET 4 C ? ? ? 1_555 A 85J 5 N ? ? B MET 5003 B 85J 5004 1_555 ? ? ? ? ? ? ? 1.403 ? ?
covale3 covale both ? A 85J 5 C ? ? ? 1_555 A GLN 6 N ? ? B 85J 5004 B GLN 5005 1_555 ? ? ? ? ? ? ? 1.497 ? ?
covale4 covale none ? A 85J 5 CI ? ? ? 1_555 A 85G 12 CK ? ? B 85J 5004 B 85G 5011 1_555 ? ? ? ? ? ? ? 1.505 ? ?
covale5 covale both ? A TYR 11 C ? ? ? 1_555 A 85G 12 N ? ? B TYR 5010 B 85G 5011 1_555 ? ? ? ? ? ? ? 1.554 ? ?
covale6 covale both ? A 85G 12 C ? ? ? 1_555 A ALA 13 N ? ? B 85G 5011 B ALA 5012 1_555 ? ? ? ? ? ? ? 1.481 ? ?
covale7 covale one ? B ASN 61 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 297 C NAG 1 1_555 ? ? ? ? ? ? ? 1.464 ?
N-Glycosylation
covale8 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.449 ? ?
covale9 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.442 ? ?
covale10 covale both ? C BMA . O6 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.452 ? ?
covale11 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 7 1_555 ? ? ? ? ? ? ? 1.454 ? ?
covale12 covale both ? C MAN . O2 ? ? ? 1_555 C NAG . C1 ? ? C MAN 4 C NAG 5 1_555 ? ? ? ? ? ? ? 1.455 ? ?
covale13 covale both ? C NAG . O4 ? ? ? 1_555 C GAL . C1 ? ? C NAG 5 C GAL 6 1_555 ? ? ? ? ? ? ? 1.462 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id TYR
_struct_mon_prot_cis.label_seq_id 137
_struct_mon_prot_cis.label_asym_id B
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code ?
_struct_mon_prot_cis.auth_comp_id TYR
_struct_mon_prot_cis.auth_seq_id 373
_struct_mon_prot_cis.auth_asym_id A
_struct_mon_prot_cis.pdbx_label_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_label_seq_id_2 138
_struct_mon_prot_cis.pdbx_label_asym_id_2 B
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 ?
_struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_auth_seq_id_2 374
_struct_mon_prot_cis.pdbx_auth_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle -3.10
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA1 ? 4 ?
AA2 ? 4 ?
AA3 ? 4 ?
AA4 ? 4 ?
AA5 ? 4 ?
AA6 ? 4 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? anti-parallel
AA1 2 3 ? anti-parallel
AA1 3 4 ? anti-parallel
AA2 1 2 ? anti-parallel
AA2 2 3 ? anti-parallel
AA2 3 4 ? anti-parallel
AA3 1 2 ? anti-parallel
AA3 2 3 ? anti-parallel
AA3 3 4 ? anti-parallel
AA4 1 2 ? anti-parallel
AA4 2 3 ? anti-parallel
AA4 3 4 ? anti-parallel
AA5 1 2 ? anti-parallel
AA5 2 3 ? anti-parallel
AA5 3 4 ? anti-parallel
AA6 1 2 ? anti-parallel
AA6 2 3 ? anti-parallel
AA6 3 4 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 SER B 3 ? PHE B 7 ? SER A 239 PHE A 243
AA1 2 GLU B 22 ? SER B 31 ? GLU A 258 SER A 267
AA1 3 THR B 63 ? THR B 71 ? THR A 299 THR A 307
AA1 4 LYS B 52 ? THR B 53 ? LYS A 288 THR A 289
AA2 1 SER B 3 ? PHE B 7 ? SER A 239 PHE A 243
AA2 2 GLU B 22 ? SER B 31 ? GLU A 258 SER A 267
AA2 3 THR B 63 ? THR B 71 ? THR A 299 THR A 307
AA2 4 GLU B 57 ? GLU B 58 ? GLU A 293 GLU A 294
AA3 1 VAL B 46 ? VAL B 48 ? VAL A 282 VAL A 284
AA3 2 LYS B 38 ? VAL B 43 ? LYS A 274 VAL A 279
AA3 3 TYR B 83 ? SER B 88 ? TYR A 319 SER A 324
AA3 4 ILE B 96 ? ILE B 100 ? ILE A 332 ILE A 336
AA4 1 GLN B 111 ? LEU B 115 ? GLN A 347 LEU A 351
AA4 2 GLN B 126 ? PHE B 136 ? GLN A 362 PHE A 372
AA4 3 PHE B 168 ? ASP B 177 ? PHE A 404 ASP A 413
AA4 4 TYR B 155 ? THR B 157 ? TYR A 391 THR A 393
AA5 1 GLN B 111 ? LEU B 115 ? GLN A 347 LEU A 351
AA5 2 GLN B 126 ? PHE B 136 ? GLN A 362 PHE A 372
AA5 3 PHE B 168 ? ASP B 177 ? PHE A 404 ASP A 413
AA5 4 VAL B 161 ? LEU B 162 ? VAL A 397 LEU A 398
AA6 1 GLN B 150 ? GLU B 152 ? GLN A 386 GLU A 388
AA6 2 ALA B 142 ? SER B 147 ? ALA A 378 SER A 383
AA6 3 PHE B 187 ? MET B 192 ? PHE A 423 MET A 428
AA6 4 TYR B 200 ? LEU B 205 ? TYR A 436 LEU A 441
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N PHE B 7 ? N PHE A 243 O THR B 24 ? O THR A 260
AA1 2 3 N VAL B 30 ? N VAL A 266 O TYR B 64 ? O TYR A 300
AA1 3 4 O VAL B 69 ? O VAL A 305 N LYS B 52 ? N LYS A 288
AA2 1 2 N PHE B 7 ? N PHE A 243 O THR B 24 ? O THR A 260
AA2 2 3 N VAL B 30 ? N VAL A 266 O TYR B 64 ? O TYR A 300
AA2 3 4 O ARG B 65 ? O ARG A 301 N GLU B 57 ? N GLU A 293
AA3 1 2 O VAL B 46 ? O VAL A 282 N VAL B 43 ? N VAL A 279
AA3 2 3 N ASN B 40 ? N ASN A 276 O LYS B 86 ? O LYS A 322
AA3 3 4 N TYR B 83 ? N TYR A 319 O ILE B 100 ? O ILE A 336
AA4 1 2 N LEU B 115 ? N LEU A 351 O THR B 130 ? O THR A 366
AA4 2 3 N LEU B 129 ? N LEU A 365 O LEU B 174 ? O LEU A 410
AA4 3 4 O LYS B 173 ? O LYS A 409 N LYS B 156 ? N LYS A 392
AA5 1 2 N LEU B 115 ? N LEU A 351 O THR B 130 ? O THR A 366
AA5 2 3 N LEU B 129 ? N LEU A 365 O LEU B 174 ? O LEU A 410
AA5 3 4 O PHE B 169 ? O PHE A 405 N VAL B 161 ? N VAL A 397
AA6 1 2 O GLU B 152 ? O GLU A 388 N TRP B 145 ? N TRP A 381
AA6 2 3 N GLU B 144 ? N GLU A 380 O SER B 190 ? O SER A 426
AA6 3 4 N PHE B 187 ? N PHE A 423 O LEU B 205 ? O LEU A 441
#
_atom_sites.entry_id 5U66
_atom_sites.fract_transf_matrix[1][1] 0.020340
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.007886
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.010878
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 SIN 1 5000 5000 SIN SIN B . n
A 1 2 PHE 2 5001 5001 PHE PHE B . n
A 1 3 ASN 3 5002 5002 ASN ASN B . n
A 1 4 MET 4 5003 5003 MET MET B . n
A 1 5 85J 5 5004 5004 85J 85J B . n
A 1 6 GLN 6 5005 5005 GLN GLN B . n
A 1 7 GLN 7 5006 5006 GLN GLN B . n
A 1 8 ARG 8 5007 5007 ARG ARG B . n
A 1 9 ARG 9 5008 5008 ARG ARG B . n
A 1 10 PHE 10 5009 5009 PHE PHE B . n
A 1 11 TYR 11 5010 5010 TYR TYR B . n
A 1 12 85G 12 5011 5011 85G 85G B . n
A 1 13 ALA 13 5012 5012 ALA ALA B . n
A 1 14 LEU 14 5013 5013 LEU LEU B . n
A 1 15 HIS 15 5014 5014 HIS HIS B . n
B 2 1 GLY 1 237 237 GLY GLY A . n
B 2 2 PRO 2 238 238 PRO PRO A . n
B 2 3 SER 3 239 239 SER SER A . n
B 2 4 VAL 4 240 240 VAL VAL A . n
B 2 5 PHE 5 241 241 PHE PHE A . n
B 2 6 LEU 6 242 242 LEU LEU A . n
B 2 7 PHE 7 243 243 PHE PHE A . n
B 2 8 PRO 8 244 244 PRO PRO A . n
B 2 9 PRO 9 245 245 PRO PRO A . n
B 2 10 LYS 10 246 246 LYS LYS A . n
B 2 11 PRO 11 247 247 PRO PRO A . n
B 2 12 LYS 12 248 248 LYS LYS A . n
B 2 13 ASP 13 249 249 ASP ASP A . n
B 2 14 THR 14 250 250 THR THR A . n
B 2 15 LEU 15 251 251 LEU LEU A . n
B 2 16 MET 16 252 252 MET MET A . n
B 2 17 ILE 17 253 253 ILE ILE A . n
B 2 18 SER 18 254 254 SER SER A . n
B 2 19 ARG 19 255 255 ARG ARG A . n
B 2 20 THR 20 256 256 THR THR A . n
B 2 21 PRO 21 257 257 PRO PRO A . n
B 2 22 GLU 22 258 258 GLU GLU A . n
B 2 23 VAL 23 259 259 VAL VAL A . n
B 2 24 THR 24 260 260 THR THR A . n
B 2 25 CYS 25 261 261 CYS CYS A . n
B 2 26 VAL 26 262 262 VAL VAL A . n
B 2 27 VAL 27 263 263 VAL VAL A . n
B 2 28 VAL 28 264 264 VAL VAL A . n
B 2 29 ASP 29 265 265 ASP ASP A . n
B 2 30 VAL 30 266 266 VAL VAL A . n
B 2 31 SER 31 267 267 SER SER A . n
B 2 32 HIS 32 268 268 HIS HIS A . n
B 2 33 GLU 33 269 269 GLU GLU A . n
B 2 34 ASP 34 270 270 ASP ASP A . n
B 2 35 PRO 35 271 271 PRO PRO A . n
B 2 36 GLU 36 272 272 GLU GLU A . n
B 2 37 VAL 37 273 273 VAL VAL A . n
B 2 38 LYS 38 274 274 LYS LYS A . n
B 2 39 PHE 39 275 275 PHE PHE A . n
B 2 40 ASN 40 276 276 ASN ASN A . n
B 2 41 TRP 41 277 277 TRP TRP A . n
B 2 42 TYR 42 278 278 TYR TYR A . n
B 2 43 VAL 43 279 279 VAL VAL A . n
B 2 44 ASP 44 280 280 ASP ASP A . n
B 2 45 GLY 45 281 281 GLY GLY A . n
B 2 46 VAL 46 282 282 VAL VAL A . n
B 2 47 GLU 47 283 283 GLU GLU A . n
B 2 48 VAL 48 284 284 VAL VAL A . n
B 2 49 HIS 49 285 285 HIS HIS A . n
B 2 50 ASN 50 286 286 ASN ASN A . n
B 2 51 ALA 51 287 287 ALA ALA A . n
B 2 52 LYS 52 288 288 LYS LYS A . n
B 2 53 THR 53 289 289 THR THR A . n
B 2 54 LYS 54 290 290 LYS LYS A . n
B 2 55 PRO 55 291 291 PRO PRO A . n
B 2 56 ARG 56 292 292 ARG ARG A . n
B 2 57 GLU 57 293 293 GLU GLU A . n
B 2 58 GLU 58 294 294 GLU GLU A . n
B 2 59 GLN 59 295 295 GLN GLN A . n
B 2 60 TYR 60 296 296 TYR TYR A . n
B 2 61 ASN 61 297 297 ASN ASN A . n
B 2 62 SER 62 298 298 SER SER A . n
B 2 63 THR 63 299 299 THR THR A . n
B 2 64 TYR 64 300 300 TYR TYR A . n
B 2 65 ARG 65 301 301 ARG ARG A . n
B 2 66 VAL 66 302 302 VAL VAL A . n
B 2 67 VAL 67 303 303 VAL VAL A . n
B 2 68 SER 68 304 304 SER SER A . n
B 2 69 VAL 69 305 305 VAL VAL A . n
B 2 70 LEU 70 306 306 LEU LEU A . n
B 2 71 THR 71 307 307 THR THR A . n
B 2 72 VAL 72 308 308 VAL VAL A . n
B 2 73 LEU 73 309 309 LEU LEU A . n
B 2 74 HIS 74 310 310 HIS HIS A . n
B 2 75 GLN 75 311 311 GLN GLN A . n
B 2 76 ASP 76 312 312 ASP ASP A . n
B 2 77 TRP 77 313 313 TRP TRP A . n
B 2 78 LEU 78 314 314 LEU LEU A . n
B 2 79 ASN 79 315 315 ASN ASN A . n
B 2 80 GLY 80 316 316 GLY GLY A . n
B 2 81 LYS 81 317 317 LYS LYS A . n
B 2 82 GLU 82 318 318 GLU GLU A . n
B 2 83 TYR 83 319 319 TYR TYR A . n
B 2 84 LYS 84 320 320 LYS LYS A . n
B 2 85 CYS 85 321 321 CYS CYS A . n
B 2 86 LYS 86 322 322 LYS LYS A . n
B 2 87 VAL 87 323 323 VAL VAL A . n
B 2 88 SER 88 324 324 SER SER A . n
B 2 89 ASN 89 325 325 ASN ASN A . n
B 2 90 LYS 90 326 326 LYS LYS A . n
B 2 91 ALA 91 327 327 ALA ALA A . n
B 2 92 LEU 92 328 328 LEU LEU A . n
B 2 93 PRO 93 329 329 PRO PRO A . n
B 2 94 ALA 94 330 330 ALA ALA A . n
B 2 95 PRO 95 331 331 PRO PRO A . n
B 2 96 ILE 96 332 332 ILE ILE A . n
B 2 97 GLU 97 333 333 GLU GLU A . n
B 2 98 LYS 98 334 334 LYS LYS A . n
B 2 99 THR 99 335 335 THR THR A . n
B 2 100 ILE 100 336 336 ILE ILE A . n
B 2 101 SER 101 337 337 SER SER A . n
B 2 102 LYS 102 338 338 LYS LYS A . n
B 2 103 ALA 103 339 339 ALA ALA A . n
B 2 104 LYS 104 340 340 LYS LYS A . n
B 2 105 GLY 105 341 341 GLY GLY A . n
B 2 106 GLN 106 342 342 GLN GLN A . n
B 2 107 PRO 107 343 343 PRO PRO A . n
B 2 108 ARG 108 344 344 ARG ARG A . n
B 2 109 GLU 109 345 345 GLU GLU A . n
B 2 110 PRO 110 346 346 PRO PRO A . n
B 2 111 GLN 111 347 347 GLN GLN A . n
B 2 112 VAL 112 348 348 VAL VAL A . n
B 2 113 TYR 113 349 349 TYR TYR A . n
B 2 114 THR 114 350 350 THR THR A . n
B 2 115 LEU 115 351 351 LEU LEU A . n
B 2 116 PRO 116 352 352 PRO PRO A . n
B 2 117 PRO 117 353 353 PRO PRO A . n
B 2 118 SER 118 354 354 SER SER A . n
B 2 119 ARG 119 355 355 ARG ARG A . n
B 2 120 GLU 120 356 356 GLU GLU A . n
B 2 121 GLU 121 357 357 GLU GLU A . n
B 2 122 MET 122 358 358 MET MET A . n
B 2 123 THR 123 359 359 THR THR A . n
B 2 124 LYS 124 360 360 LYS LYS A . n
B 2 125 ASN 125 361 361 ASN ASN A . n
B 2 126 GLN 126 362 362 GLN GLN A . n
B 2 127 VAL 127 363 363 VAL VAL A . n
B 2 128 SER 128 364 364 SER SER A . n
B 2 129 LEU 129 365 365 LEU LEU A . n
B 2 130 THR 130 366 366 THR THR A . n
B 2 131 CYS 131 367 367 CYS CYS A . n
B 2 132 LEU 132 368 368 LEU LEU A . n
B 2 133 VAL 133 369 369 VAL VAL A . n
B 2 134 LYS 134 370 370 LYS LYS A . n
B 2 135 GLY 135 371 371 GLY GLY A . n
B 2 136 PHE 136 372 372 PHE PHE A . n
B 2 137 TYR 137 373 373 TYR TYR A . n
B 2 138 PRO 138 374 374 PRO PRO A . n
B 2 139 SER 139 375 375 SER SER A . n
B 2 140 ASP 140 376 376 ASP ASP A . n
B 2 141 ILE 141 377 377 ILE ILE A . n
B 2 142 ALA 142 378 378 ALA ALA A . n
B 2 143 VAL 143 379 379 VAL VAL A . n
B 2 144 GLU 144 380 380 GLU GLU A . n
B 2 145 TRP 145 381 381 TRP TRP A . n
B 2 146 GLU 146 382 382 GLU GLU A . n
B 2 147 SER 147 383 383 SER SER A . n
B 2 148 ASN 148 384 384 ASN ASN A . n
B 2 149 GLY 149 385 385 GLY GLY A . n
B 2 150 GLN 150 386 386 GLN GLN A . n
B 2 151 PRO 151 387 387 PRO PRO A . n
B 2 152 GLU 152 388 388 GLU GLU A . n
B 2 153 ASN 153 389 389 ASN ASN A . n
B 2 154 ASN 154 390 390 ASN ASN A . n
B 2 155 TYR 155 391 391 TYR TYR A . n
B 2 156 LYS 156 392 392 LYS LYS A . n
B 2 157 THR 157 393 393 THR THR A . n
B 2 158 THR 158 394 394 THR THR A . n
B 2 159 PRO 159 395 395 PRO PRO A . n
B 2 160 PRO 160 396 396 PRO PRO A . n
B 2 161 VAL 161 397 397 VAL VAL A . n
B 2 162 LEU 162 398 398 LEU LEU A . n
B 2 163 ASP 163 399 399 ASP ASP A . n
B 2 164 SER 164 400 400 SER SER A . n
B 2 165 ASP 165 401 401 ASP ASP A . n
B 2 166 GLY 166 402 402 GLY GLY A . n
B 2 167 SER 167 403 403 SER SER A . n
B 2 168 PHE 168 404 404 PHE PHE A . n
B 2 169 PHE 169 405 405 PHE PHE A . n
B 2 170 LEU 170 406 406 LEU LEU A . n
B 2 171 TYR 171 407 407 TYR TYR A . n
B 2 172 SER 172 408 408 SER SER A . n
B 2 173 LYS 173 409 409 LYS LYS A . n
B 2 174 LEU 174 410 410 LEU LEU A . n
B 2 175 THR 175 411 411 THR THR A . n
B 2 176 VAL 176 412 412 VAL VAL A . n
B 2 177 ASP 177 413 413 ASP ASP A . n
B 2 178 LYS 178 414 414 LYS LYS A . n
B 2 179 SER 179 415 415 SER SER A . n
B 2 180 ARG 180 416 416 ARG ARG A . n
B 2 181 TRP 181 417 417 TRP TRP A . n
B 2 182 GLN 182 418 418 GLN GLN A . n
B 2 183 GLN 183 419 419 GLN GLN A . n
B 2 184 GLY 184 420 420 GLY GLY A . n
B 2 185 ASN 185 421 421 ASN ASN A . n
B 2 186 VAL 186 422 422 VAL VAL A . n
B 2 187 PHE 187 423 423 PHE PHE A . n
B 2 188 SER 188 424 424 SER SER A . n
B 2 189 CYS 189 425 425 CYS CYS A . n
B 2 190 SER 190 426 426 SER SER A . n
B 2 191 VAL 191 427 427 VAL VAL A . n
B 2 192 MET 192 428 428 MET MET A . n
B 2 193 HIS 193 429 429 HIS HIS A . n
B 2 194 GLU 194 430 430 GLU GLU A . n
B 2 195 ALA 195 431 431 ALA ALA A . n
B 2 196 LEU 196 432 432 LEU LEU A . n
B 2 197 HIS 197 433 433 HIS HIS A . n
B 2 198 ASN 198 434 434 ASN ASN A . n
B 2 199 HIS 199 435 435 HIS HIS A . n
B 2 200 TYR 200 436 436 TYR TYR A . n
B 2 201 THR 201 437 437 THR THR A . n
B 2 202 GLN 202 438 438 GLN GLN A . n
B 2 203 LYS 203 439 439 LYS LYS A . n
B 2 204 SER 204 440 440 SER SER A . n
B 2 205 LEU 205 441 441 LEU LEU A . n
B 2 206 SER 206 442 442 SER SER A . n
B 2 207 LEU 207 443 443 LEU LEU A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 HOH 1 5101 5101 HOH HOH B .
D 4 HOH 2 5102 794 HOH HOH B .
D 4 HOH 3 5103 5102 HOH HOH B .
D 4 HOH 4 5104 5103 HOH HOH B .
D 4 HOH 5 5105 758 HOH HOH B .
D 4 HOH 6 5106 5104 HOH HOH B .
D 4 HOH 7 5107 753 HOH HOH B .
D 4 HOH 8 5108 5105 HOH HOH B .
D 4 HOH 9 5109 5106 HOH HOH B .
D 4 HOH 10 5110 5107 HOH HOH B .
D 4 HOH 11 5111 702 HOH HOH B .
D 4 HOH 12 5112 790 HOH HOH B .
D 4 HOH 13 5113 773 HOH HOH B .
D 4 HOH 14 5114 770 HOH HOH B .
D 4 HOH 15 5115 5112 HOH HOH B .
D 4 HOH 16 5116 5109 HOH HOH B .
D 4 HOH 17 5117 5110 HOH HOH B .
D 4 HOH 18 5118 5111 HOH HOH B .
D 4 HOH 19 5119 5113 HOH HOH B .
D 4 HOH 20 5120 5117 HOH HOH B .
D 4 HOH 21 5121 5118 HOH HOH B .
D 4 HOH 22 5122 5122 HOH HOH B .
D 4 HOH 23 5123 5124 HOH HOH B .
E 4 HOH 1 601 601 HOH HOH A .
E 4 HOH 2 602 705 HOH HOH A .
E 4 HOH 3 603 746 HOH HOH A .
E 4 HOH 4 604 5108 HOH HOH A .
E 4 HOH 5 605 603 HOH HOH A .
E 4 HOH 6 606 605 HOH HOH A .
E 4 HOH 7 607 606 HOH HOH A .
E 4 HOH 8 608 607 HOH HOH A .
E 4 HOH 9 609 608 HOH HOH A .
E 4 HOH 10 610 609 HOH HOH A .
E 4 HOH 11 611 610 HOH HOH A .
E 4 HOH 12 612 701 HOH HOH A .
E 4 HOH 13 613 611 HOH HOH A .
E 4 HOH 14 614 612 HOH HOH A .
E 4 HOH 15 615 613 HOH HOH A .
E 4 HOH 16 616 614 HOH HOH A .
E 4 HOH 17 617 615 HOH HOH A .
E 4 HOH 18 618 616 HOH HOH A .
E 4 HOH 19 619 617 HOH HOH A .
E 4 HOH 20 620 618 HOH HOH A .
E 4 HOH 21 621 619 HOH HOH A .
E 4 HOH 22 622 620 HOH HOH A .
E 4 HOH 23 623 783 HOH HOH A .
E 4 HOH 24 624 621 HOH HOH A .
E 4 HOH 25 625 736 HOH HOH A .
E 4 HOH 26 626 622 HOH HOH A .
E 4 HOH 27 627 623 HOH HOH A .
E 4 HOH 28 628 624 HOH HOH A .
E 4 HOH 29 629 625 HOH HOH A .
E 4 HOH 30 630 734 HOH HOH A .
E 4 HOH 31 631 626 HOH HOH A .
E 4 HOH 32 632 793 HOH HOH A .
E 4 HOH 33 633 627 HOH HOH A .
E 4 HOH 34 634 628 HOH HOH A .
E 4 HOH 35 635 5130 HOH HOH A .
E 4 HOH 36 636 629 HOH HOH A .
E 4 HOH 37 637 630 HOH HOH A .
E 4 HOH 38 638 604 HOH HOH A .
E 4 HOH 39 639 631 HOH HOH A .
E 4 HOH 40 640 632 HOH HOH A .
E 4 HOH 41 641 633 HOH HOH A .
E 4 HOH 42 642 634 HOH HOH A .
E 4 HOH 43 643 635 HOH HOH A .
E 4 HOH 44 644 636 HOH HOH A .
E 4 HOH 45 645 637 HOH HOH A .
E 4 HOH 46 646 638 HOH HOH A .
E 4 HOH 47 647 744 HOH HOH A .
E 4 HOH 48 648 639 HOH HOH A .
E 4 HOH 49 649 640 HOH HOH A .
E 4 HOH 50 650 641 HOH HOH A .
E 4 HOH 51 651 642 HOH HOH A .
E 4 HOH 52 652 643 HOH HOH A .
E 4 HOH 53 653 644 HOH HOH A .
E 4 HOH 54 654 772 HOH HOH A .
E 4 HOH 55 655 645 HOH HOH A .
E 4 HOH 56 656 646 HOH HOH A .
E 4 HOH 57 657 647 HOH HOH A .
E 4 HOH 58 658 648 HOH HOH A .
E 4 HOH 59 659 649 HOH HOH A .
E 4 HOH 60 660 650 HOH HOH A .
E 4 HOH 61 661 651 HOH HOH A .
E 4 HOH 62 662 652 HOH HOH A .
E 4 HOH 63 663 653 HOH HOH A .
E 4 HOH 64 664 5114 HOH HOH A .
E 4 HOH 65 665 654 HOH HOH A .
E 4 HOH 66 666 655 HOH HOH A .
E 4 HOH 67 667 683 HOH HOH A .
E 4 HOH 68 668 5126 HOH HOH A .
E 4 HOH 69 669 656 HOH HOH A .
E 4 HOH 70 670 657 HOH HOH A .
E 4 HOH 71 671 658 HOH HOH A .
E 4 HOH 72 672 659 HOH HOH A .
E 4 HOH 73 673 660 HOH HOH A .
E 4 HOH 74 674 661 HOH HOH A .
E 4 HOH 75 675 748 HOH HOH A .
E 4 HOH 76 676 662 HOH HOH A .
E 4 HOH 77 677 663 HOH HOH A .
E 4 HOH 78 678 664 HOH HOH A .
E 4 HOH 79 679 665 HOH HOH A .
E 4 HOH 80 680 774 HOH HOH A .
E 4 HOH 81 681 666 HOH HOH A .
E 4 HOH 82 682 667 HOH HOH A .
E 4 HOH 83 683 668 HOH HOH A .
E 4 HOH 84 684 669 HOH HOH A .
E 4 HOH 85 685 670 HOH HOH A .
E 4 HOH 86 686 5127 HOH HOH A .
E 4 HOH 87 687 769 HOH HOH A .
E 4 HOH 88 688 671 HOH HOH A .
E 4 HOH 89 689 672 HOH HOH A .
E 4 HOH 90 690 673 HOH HOH A .
E 4 HOH 91 691 674 HOH HOH A .
E 4 HOH 92 692 675 HOH HOH A .
E 4 HOH 93 693 676 HOH HOH A .
E 4 HOH 94 694 677 HOH HOH A .
E 4 HOH 95 695 678 HOH HOH A .
E 4 HOH 96 696 679 HOH HOH A .
E 4 HOH 97 697 680 HOH HOH A .
E 4 HOH 98 698 681 HOH HOH A .
E 4 HOH 99 699 682 HOH HOH A .
E 4 HOH 100 700 684 HOH HOH A .
E 4 HOH 101 701 685 HOH HOH A .
E 4 HOH 102 702 686 HOH HOH A .
E 4 HOH 103 703 687 HOH HOH A .
E 4 HOH 104 704 5129 HOH HOH A .
E 4 HOH 105 705 5116 HOH HOH A .
E 4 HOH 106 706 688 HOH HOH A .
E 4 HOH 107 707 689 HOH HOH A .
E 4 HOH 108 708 690 HOH HOH A .
E 4 HOH 109 709 691 HOH HOH A .
E 4 HOH 110 710 779 HOH HOH A .
E 4 HOH 111 711 692 HOH HOH A .
E 4 HOH 112 712 789 HOH HOH A .
E 4 HOH 113 713 693 HOH HOH A .
E 4 HOH 114 714 5123 HOH HOH A .
E 4 HOH 115 715 694 HOH HOH A .
E 4 HOH 116 716 695 HOH HOH A .
E 4 HOH 117 717 696 HOH HOH A .
E 4 HOH 118 718 697 HOH HOH A .
E 4 HOH 119 719 698 HOH HOH A .
E 4 HOH 120 720 5120 HOH HOH A .
E 4 HOH 121 721 700 HOH HOH A .
E 4 HOH 122 722 704 HOH HOH A .
E 4 HOH 123 723 706 HOH HOH A .
E 4 HOH 124 724 707 HOH HOH A .
E 4 HOH 125 725 725 HOH HOH A .
E 4 HOH 126 726 708 HOH HOH A .
E 4 HOH 127 727 709 HOH HOH A .
E 4 HOH 128 728 5115 HOH HOH A .
E 4 HOH 129 729 710 HOH HOH A .
E 4 HOH 130 730 756 HOH HOH A .
E 4 HOH 131 731 711 HOH HOH A .
E 4 HOH 132 732 712 HOH HOH A .
E 4 HOH 133 733 713 HOH HOH A .
E 4 HOH 134 734 714 HOH HOH A .
E 4 HOH 135 735 740 HOH HOH A .
E 4 HOH 136 736 715 HOH HOH A .
E 4 HOH 137 737 716 HOH HOH A .
E 4 HOH 138 738 717 HOH HOH A .
E 4 HOH 139 739 718 HOH HOH A .
E 4 HOH 140 740 719 HOH HOH A .
E 4 HOH 141 741 5121 HOH HOH A .
E 4 HOH 142 742 720 HOH HOH A .
E 4 HOH 143 743 721 HOH HOH A .
E 4 HOH 144 744 722 HOH HOH A .
E 4 HOH 145 745 723 HOH HOH A .
E 4 HOH 146 746 724 HOH HOH A .
E 4 HOH 147 747 730 HOH HOH A .
E 4 HOH 148 748 726 HOH HOH A .
E 4 HOH 149 749 727 HOH HOH A .
E 4 HOH 150 750 728 HOH HOH A .
E 4 HOH 151 751 729 HOH HOH A .
E 4 HOH 152 752 5119 HOH HOH A .
E 4 HOH 153 753 731 HOH HOH A .
E 4 HOH 154 754 733 HOH HOH A .
E 4 HOH 155 755 735 HOH HOH A .
E 4 HOH 156 756 737 HOH HOH A .
E 4 HOH 157 757 738 HOH HOH A .
E 4 HOH 158 758 739 HOH HOH A .
E 4 HOH 159 759 5125 HOH HOH A .
E 4 HOH 160 760 741 HOH HOH A .
E 4 HOH 161 761 742 HOH HOH A .
E 4 HOH 162 762 743 HOH HOH A .
E 4 HOH 163 763 765 HOH HOH A .
E 4 HOH 164 764 745 HOH HOH A .
E 4 HOH 165 765 747 HOH HOH A .
E 4 HOH 166 766 776 HOH HOH A .
E 4 HOH 167 767 792 HOH HOH A .
E 4 HOH 168 768 749 HOH HOH A .
E 4 HOH 169 769 750 HOH HOH A .
E 4 HOH 170 770 602 HOH HOH A .
E 4 HOH 171 771 751 HOH HOH A .
E 4 HOH 172 772 766 HOH HOH A .
E 4 HOH 173 773 752 HOH HOH A .
E 4 HOH 174 774 5128 HOH HOH A .
E 4 HOH 175 775 754 HOH HOH A .
E 4 HOH 176 776 755 HOH HOH A .
E 4 HOH 177 777 757 HOH HOH A .
E 4 HOH 178 778 764 HOH HOH A .
E 4 HOH 179 779 767 HOH HOH A .
E 4 HOH 180 780 777 HOH HOH A .
E 4 HOH 181 781 759 HOH HOH A .
E 4 HOH 182 782 760 HOH HOH A .
E 4 HOH 183 783 761 HOH HOH A .
E 4 HOH 184 784 762 HOH HOH A .
E 4 HOH 185 785 763 HOH HOH A .
E 4 HOH 186 786 775 HOH HOH A .
E 4 HOH 187 787 786 HOH HOH A .
E 4 HOH 188 788 768 HOH HOH A .
E 4 HOH 189 789 771 HOH HOH A .
E 4 HOH 190 790 699 HOH HOH A .
E 4 HOH 191 791 778 HOH HOH A .
E 4 HOH 192 792 782 HOH HOH A .
E 4 HOH 193 793 780 HOH HOH A .
E 4 HOH 194 794 781 HOH HOH A .
E 4 HOH 195 795 703 HOH HOH A .
E 4 HOH 196 796 784 HOH HOH A .
E 4 HOH 197 797 785 HOH HOH A .
E 4 HOH 198 798 791 HOH HOH A .
E 4 HOH 199 799 787 HOH HOH A .
E 4 HOH 200 800 788 HOH HOH A .
E 4 HOH 201 801 732 HOH HOH A .
#
_pdbx_molecule_features.prd_id PRD_002261
_pdbx_molecule_features.name 'STAPLED PEPTIDE FROM DOMAIN B OF PROTEIN A'
_pdbx_molecule_features.type Oligopeptide
_pdbx_molecule_features.class Inhibitor
_pdbx_molecule_features.details 'single helix from the B-domain of protein A bound to IgG1 Fc'
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_002261
_pdbx_molecule.asym_id A
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details tetrameric
_pdbx_struct_assembly.oligomeric_count 4
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 9470 ?
1 MORE 38 ?
1 'SSA (A^2)' 23150 ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 45.9635000000
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id B
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 5119
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id D
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2017-05-24
2 'Structure model' 1 1 2017-11-08
3 'Structure model' 2 0 2020-07-29
4 'Structure model' 3 0 2020-12-16
5 'Structure model' 3 1 2023-10-04
6 'Structure model' 3 2 2023-11-15
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Atomic model'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Structure summary'
6 4 'Structure model' Advisory
7 4 'Structure model' 'Atomic model'
8 4 'Structure model' 'Data collection'
9 4 'Structure model' 'Derived calculations'
10 4 'Structure model' 'Structure summary'
11 5 'Structure model' 'Data collection'
12 5 'Structure model' 'Database references'
13 5 'Structure model' 'Refinement description'
14 6 'Structure model' 'Data collection'
15 6 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 3 'Structure model' atom_site
3 3 'Structure model' atom_site_anisotrop
4 3 'Structure model' chem_comp
5 3 'Structure model' entity
6 3 'Structure model' pdbx_branch_scheme
7 3 'Structure model' pdbx_chem_comp_identifier
8 3 'Structure model' pdbx_entity_branch
9 3 'Structure model' pdbx_entity_branch_descriptor
10 3 'Structure model' pdbx_entity_branch_link
11 3 'Structure model' pdbx_entity_branch_list
12 3 'Structure model' pdbx_entity_nonpoly
13 3 'Structure model' pdbx_nonpoly_scheme
14 3 'Structure model' pdbx_struct_assembly_gen
15 3 'Structure model' pdbx_struct_special_symmetry
16 3 'Structure model' struct_asym
17 3 'Structure model' struct_conn
18 3 'Structure model' struct_site
19 3 'Structure model' struct_site_gen
20 4 'Structure model' atom_site
21 4 'Structure model' atom_site_anisotrop
22 4 'Structure model' chem_comp
23 4 'Structure model' pdbx_distant_solvent_atoms
24 4 'Structure model' pdbx_nonpoly_scheme
25 4 'Structure model' pdbx_struct_assembly
26 4 'Structure model' pdbx_struct_assembly_gen
27 4 'Structure model' pdbx_struct_assembly_prop
28 4 'Structure model' pdbx_struct_oper_list
29 4 'Structure model' pdbx_validate_close_contact
30 4 'Structure model' struct_conn
31 5 'Structure model' chem_comp_atom
32 5 'Structure model' chem_comp_bond
33 5 'Structure model' database_2
34 5 'Structure model' pdbx_initial_refinement_model
35 6 'Structure model' chem_comp_atom
36 6 'Structure model' chem_comp_bond
37 6 'Structure model' struct_conn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_volume'
2 2 'Structure model' '_citation.page_first'
3 2 'Structure model' '_citation.page_last'
4 3 'Structure model' '_atom_site.B_iso_or_equiv'
5 3 'Structure model' '_atom_site.Cartn_x'
6 3 'Structure model' '_atom_site.Cartn_y'
7 3 'Structure model' '_atom_site.Cartn_z'
8 3 'Structure model' '_atom_site.auth_asym_id'
9 3 'Structure model' '_atom_site.auth_comp_id'
10 3 'Structure model' '_atom_site.auth_seq_id'
11 3 'Structure model' '_atom_site.label_asym_id'
12 3 'Structure model' '_atom_site.label_comp_id'
13 3 'Structure model' '_atom_site.label_entity_id'
14 3 'Structure model' '_atom_site_anisotrop.U[1][1]'
15 3 'Structure model' '_atom_site_anisotrop.U[1][2]'
16 3 'Structure model' '_atom_site_anisotrop.U[1][3]'
17 3 'Structure model' '_atom_site_anisotrop.U[2][2]'
18 3 'Structure model' '_atom_site_anisotrop.U[2][3]'
19 3 'Structure model' '_atom_site_anisotrop.U[3][3]'
20 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id'
21 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id'
22 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id'
23 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id'
24 3 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id'
25 3 'Structure model' '_chem_comp.name'
26 3 'Structure model' '_chem_comp.type'
27 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
28 3 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id'
29 3 'Structure model' '_struct_conn.pdbx_dist_value'
30 3 'Structure model' '_struct_conn.pdbx_role'
31 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
32 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
33 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
34 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'
35 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
36 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
37 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
38 4 'Structure model' '_atom_site.B_iso_or_equiv'
39 4 'Structure model' '_atom_site.Cartn_x'
40 4 'Structure model' '_atom_site.Cartn_y'
41 4 'Structure model' '_atom_site.Cartn_z'
42 4 'Structure model' '_atom_site_anisotrop.U[1][1]'
43 4 'Structure model' '_atom_site_anisotrop.U[1][2]'
44 4 'Structure model' '_atom_site_anisotrop.U[1][3]'
45 4 'Structure model' '_atom_site_anisotrop.U[2][2]'
46 4 'Structure model' '_atom_site_anisotrop.U[2][3]'
47 4 'Structure model' '_atom_site_anisotrop.U[3][3]'
48 4 'Structure model' '_chem_comp.pdbx_synonyms'
49 4 'Structure model' '_pdbx_distant_solvent_atoms.auth_seq_id'
50 4 'Structure model' '_pdbx_nonpoly_scheme.auth_seq_num'
51 4 'Structure model' '_pdbx_struct_assembly.oligomeric_count'
52 4 'Structure model' '_pdbx_struct_assembly.oligomeric_details'
53 4 'Structure model' '_pdbx_struct_assembly_gen.oper_expression'
54 4 'Structure model' '_pdbx_struct_assembly_prop.value'
55 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1'
56 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2'
57 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
58 5 'Structure model' '_database_2.pdbx_DOI'
59 5 'Structure model' '_database_2.pdbx_database_accession'
60 6 'Structure model' '_chem_comp_atom.atom_id'
61 6 'Structure model' '_chem_comp_bond.atom_id_1'
62 6 'Structure model' '_chem_comp_bond.atom_id_2'
63 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
loop_
_pdbx_refine_tls.pdbx_refine_id
_pdbx_refine_tls.id
_pdbx_refine_tls.details
_pdbx_refine_tls.method
_pdbx_refine_tls.origin_x
_pdbx_refine_tls.origin_y
_pdbx_refine_tls.origin_z
_pdbx_refine_tls.T[1][1]
_pdbx_refine_tls.T[2][2]
_pdbx_refine_tls.T[3][3]
_pdbx_refine_tls.T[1][2]
_pdbx_refine_tls.T[1][3]
_pdbx_refine_tls.T[2][3]
_pdbx_refine_tls.L[1][1]
_pdbx_refine_tls.L[2][2]
_pdbx_refine_tls.L[3][3]
_pdbx_refine_tls.L[1][2]
_pdbx_refine_tls.L[1][3]
_pdbx_refine_tls.L[2][3]
_pdbx_refine_tls.S[1][1]
_pdbx_refine_tls.S[1][2]
_pdbx_refine_tls.S[1][3]
_pdbx_refine_tls.S[2][1]
_pdbx_refine_tls.S[2][2]
_pdbx_refine_tls.S[2][3]
_pdbx_refine_tls.S[3][1]
_pdbx_refine_tls.S[3][2]
_pdbx_refine_tls.S[3][3]
'X-RAY DIFFRACTION' 1 ? refined 2.3485 43.8933 32.4682 0.2431 0.0624 0.2250 0.0696 0.1062 0.0096 3.2657 5.9602 3.4817 4.3122
2.1148 2.1006 -0.0919 -0.1483 0.5122 -0.0795 -0.2043 0.7413 0.1009 0.0242 0.2962
'X-RAY DIFFRACTION' 2 ? refined 24.7516 67.4886 39.4259 0.1421 0.1300 0.0677 -0.0024 -0.0023 -0.0007 0.2299 0.1451 1.0655 -0.0603
-0.4587 0.2579 0.0170 -0.0194 0.0034 -0.0076 0.0127 -0.0076 -0.0364 0.0405 -0.0297
'X-RAY DIFFRACTION' 3 ? refined 9.2791 56.3909 33.4242 0.1397 0.1262 0.0689 -0.0007 0.0053 -0.0021 0.0625 0.0145 0.2059 0.0255
0.0515 0.0442 -0.0015 -0.0103 0.0108 0.0039 -0.0102 -0.0005 0.0448 -0.0027 0.0117
#
loop_
_pdbx_refine_tls_group.pdbx_refine_id
_pdbx_refine_tls_group.id
_pdbx_refine_tls_group.refine_tls_id
_pdbx_refine_tls_group.beg_auth_asym_id
_pdbx_refine_tls_group.beg_auth_seq_id
_pdbx_refine_tls_group.beg_label_asym_id
_pdbx_refine_tls_group.beg_label_seq_id
_pdbx_refine_tls_group.end_auth_asym_id
_pdbx_refine_tls_group.end_auth_seq_id
_pdbx_refine_tls_group.end_label_asym_id
_pdbx_refine_tls_group.end_label_seq_id
_pdbx_refine_tls_group.selection
_pdbx_refine_tls_group.selection_details
'X-RAY DIFFRACTION' 1 1 A 501 ? ? A 507 ? ? ? ?
'X-RAY DIFFRACTION' 2 2 B 5000 ? ? B 5014 ? ? ? ?
'X-RAY DIFFRACTION' 3 3 A 237 ? ? A 443 ? ? ? ?
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0155 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 3
? phasing ? ? ? ? ? ? ? ? ? ? ? AMoRE ? ? ? . 4
#
_pdbx_entry_details.entry_id 5U66
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.compound_details 'stapled peptide derived from the B-domain of protein A bound to IgG1 Fc'
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest ?
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 O A HOH 710 ? ? O A HOH 781 ? ? 2.15
2 1 O B HOH 5106 ? ? O B HOH 5110 ? ? 2.18
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 C B 85J 5004 ? ? N B GLN 5005 ? ? 1.497 1.336 0.161 0.023 Y
2 1 C B TYR 5010 ? ? N B 85G 5011 ? ? 1.554 1.336 0.218 0.023 Y
3 1 C B 85G 5011 ? ? N B ALA 5012 ? ? 1.481 1.336 0.145 0.023 Y
4 1 CD A GLU 430 ? ? OE2 A GLU 430 ? ? 1.335 1.252 0.083 0.011 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 NE B ARG 5007 ? ? CZ B ARG 5007 ? ? NH1 B ARG 5007 ? ? 125.04 120.30 4.74 0.50 N
2 1 NE A ARG 344 ? ? CZ A ARG 344 ? ? NH1 A ARG 344 ? ? 117.24 120.30 -3.06 0.50 N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 SER A 298 ? ? 66.01 -0.18
2 1 ALA A 327 ? ? -63.05 2.54
#
loop_
_pdbx_distant_solvent_atoms.id
_pdbx_distant_solvent_atoms.PDB_model_num
_pdbx_distant_solvent_atoms.auth_atom_id
_pdbx_distant_solvent_atoms.label_alt_id
_pdbx_distant_solvent_atoms.auth_asym_id
_pdbx_distant_solvent_atoms.auth_comp_id
_pdbx_distant_solvent_atoms.auth_seq_id
_pdbx_distant_solvent_atoms.PDB_ins_code
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance
_pdbx_distant_solvent_atoms.neighbor_ligand_distance
1 1 O ? A HOH 797 ? 5.81 .
2 1 O ? A HOH 798 ? 5.91 .
3 1 O ? A HOH 799 ? 6.26 .
4 1 O ? A HOH 800 ? 6.71 .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
85G N N N N 1
85G CA C N S 2
85G C C N N 3
85G O O N N 4
85G CB C N N 5
85G CG C N N 6
85G CD C N N 7
85G OE1 O N N 8
85G CK C N N 9
85G CY C N N 10
85G NM N N N 11
85G H H N N 12
85G H2 H N N 13
85G HA H N N 14
85G H6 H N N 15
85G H7 H N N 16
85G H8 H N N 17
85G H9 H N N 18
85G H10 H N N 19
85G H11 H N N 20
85G H12 H N N 21
85G H13 H N N 22
85G H14 H N N 23
85G H15 H N N 24
85G OXT O N N 25
85G HXT H N N 26
85J N N N N 27
85J CA C N S 28
85J C C N N 29
85J O O N N 30
85J CB C N N 31
85J CG C N N 32
85J CD C N N 33
85J OE1 O N N 34
85J NE2 N N N 35
85J CZ C N N 36
85J CT C N N 37
85J CI C N N 38
85J OXT O N N 39
85J H2 H N N 40
85J H H N N 41
85J HA H N N 42
85J H5 H N N 43
85J H6 H N N 44
85J H7 H N N 45
85J H8 H N N 46
85J H9 H N N 47
85J H10 H N N 48
85J H11 H N N 49
85J H12 H N N 50
85J H13 H N N 51
85J H14 H N N 52
85J H15 H N N 53
85J H16 H N N 54
85J HXT H N N 55
ALA N N N N 56
ALA CA C N S 57
ALA C C N N 58
ALA O O N N 59
ALA CB C N N 60
ALA OXT O N N 61
ALA H H N N 62
ALA H2 H N N 63
ALA HA H N N 64
ALA HB1 H N N 65
ALA HB2 H N N 66
ALA HB3 H N N 67
ALA HXT H N N 68
ARG N N N N 69
ARG CA C N S 70
ARG C C N N 71
ARG O O N N 72
ARG CB C N N 73
ARG CG C N N 74
ARG CD C N N 75
ARG NE N N N 76
ARG CZ C N N 77
ARG NH1 N N N 78
ARG NH2 N N N 79
ARG OXT O N N 80
ARG H H N N 81
ARG H2 H N N 82
ARG HA H N N 83
ARG HB2 H N N 84
ARG HB3 H N N 85
ARG HG2 H N N 86
ARG HG3 H N N 87
ARG HD2 H N N 88
ARG HD3 H N N 89
ARG HE H N N 90
ARG HH11 H N N 91
ARG HH12 H N N 92
ARG HH21 H N N 93
ARG HH22 H N N 94
ARG HXT H N N 95
ASN N N N N 96
ASN CA C N S 97
ASN C C N N 98
ASN O O N N 99
ASN CB C N N 100
ASN CG C N N 101
ASN OD1 O N N 102
ASN ND2 N N N 103
ASN OXT O N N 104
ASN H H N N 105
ASN H2 H N N 106
ASN HA H N N 107
ASN HB2 H N N 108
ASN HB3 H N N 109
ASN HD21 H N N 110
ASN HD22 H N N 111
ASN HXT H N N 112
ASP N N N N 113
ASP CA C N S 114
ASP C C N N 115
ASP O O N N 116
ASP CB C N N 117
ASP CG C N N 118
ASP OD1 O N N 119
ASP OD2 O N N 120
ASP OXT O N N 121
ASP H H N N 122
ASP H2 H N N 123
ASP HA H N N 124
ASP HB2 H N N 125
ASP HB3 H N N 126
ASP HD2 H N N 127
ASP HXT H N N 128
BMA C1 C N R 129
BMA C2 C N S 130
BMA C3 C N S 131
BMA C4 C N S 132
BMA C5 C N R 133
BMA C6 C N N 134
BMA O1 O N N 135
BMA O2 O N N 136
BMA O3 O N N 137
BMA O4 O N N 138
BMA O5 O N N 139
BMA O6 O N N 140
BMA H1 H N N 141
BMA H2 H N N 142
BMA H3 H N N 143
BMA H4 H N N 144
BMA H5 H N N 145
BMA H61 H N N 146
BMA H62 H N N 147
BMA HO1 H N N 148
BMA HO2 H N N 149
BMA HO3 H N N 150
BMA HO4 H N N 151
BMA HO6 H N N 152
CYS N N N N 153
CYS CA C N R 154
CYS C C N N 155
CYS O O N N 156
CYS CB C N N 157
CYS SG S N N 158
CYS OXT O N N 159
CYS H H N N 160
CYS H2 H N N 161
CYS HA H N N 162
CYS HB2 H N N 163
CYS HB3 H N N 164
CYS HG H N N 165
CYS HXT H N N 166
GAL C1 C N R 167
GAL C2 C N R 168
GAL C3 C N S 169
GAL C4 C N R 170
GAL C5 C N R 171
GAL C6 C N N 172
GAL O1 O N N 173
GAL O2 O N N 174
GAL O3 O N N 175
GAL O4 O N N 176
GAL O5 O N N 177
GAL O6 O N N 178
GAL H1 H N N 179
GAL H2 H N N 180
GAL H3 H N N 181
GAL H4 H N N 182
GAL H5 H N N 183
GAL H61 H N N 184
GAL H62 H N N 185
GAL HO1 H N N 186
GAL HO2 H N N 187
GAL HO3 H N N 188
GAL HO4 H N N 189
GAL HO6 H N N 190
GLN N N N N 191
GLN CA C N S 192
GLN C C N N 193
GLN O O N N 194
GLN CB C N N 195
GLN CG C N N 196
GLN CD C N N 197
GLN OE1 O N N 198
GLN NE2 N N N 199
GLN OXT O N N 200
GLN H H N N 201
GLN H2 H N N 202
GLN HA H N N 203
GLN HB2 H N N 204
GLN HB3 H N N 205
GLN HG2 H N N 206
GLN HG3 H N N 207
GLN HE21 H N N 208
GLN HE22 H N N 209
GLN HXT H N N 210
GLU N N N N 211
GLU CA C N S 212
GLU C C N N 213
GLU O O N N 214
GLU CB C N N 215
GLU CG C N N 216
GLU CD C N N 217
GLU OE1 O N N 218
GLU OE2 O N N 219
GLU OXT O N N 220
GLU H H N N 221
GLU H2 H N N 222
GLU HA H N N 223
GLU HB2 H N N 224
GLU HB3 H N N 225
GLU HG2 H N N 226
GLU HG3 H N N 227
GLU HE2 H N N 228
GLU HXT H N N 229
GLY N N N N 230
GLY CA C N N 231
GLY C C N N 232
GLY O O N N 233
GLY OXT O N N 234
GLY H H N N 235
GLY H2 H N N 236
GLY HA2 H N N 237
GLY HA3 H N N 238
GLY HXT H N N 239
HIS N N N N 240
HIS CA C N S 241
HIS C C N N 242
HIS O O N N 243
HIS CB C N N 244
HIS CG C Y N 245
HIS ND1 N Y N 246
HIS CD2 C Y N 247
HIS CE1 C Y N 248
HIS NE2 N Y N 249
HIS OXT O N N 250
HIS H H N N 251
HIS H2 H N N 252
HIS HA H N N 253
HIS HB2 H N N 254
HIS HB3 H N N 255
HIS HD1 H N N 256
HIS HD2 H N N 257
HIS HE1 H N N 258
HIS HE2 H N N 259
HIS HXT H N N 260
HOH O O N N 261
HOH H1 H N N 262
HOH H2 H N N 263
ILE N N N N 264
ILE CA C N S 265
ILE C C N N 266
ILE O O N N 267
ILE CB C N S 268
ILE CG1 C N N 269
ILE CG2 C N N 270
ILE CD1 C N N 271
ILE OXT O N N 272
ILE H H N N 273
ILE H2 H N N 274
ILE HA H N N 275
ILE HB H N N 276
ILE HG12 H N N 277
ILE HG13 H N N 278
ILE HG21 H N N 279
ILE HG22 H N N 280
ILE HG23 H N N 281
ILE HD11 H N N 282
ILE HD12 H N N 283
ILE HD13 H N N 284
ILE HXT H N N 285
LEU N N N N 286
LEU CA C N S 287
LEU C C N N 288
LEU O O N N 289
LEU CB C N N 290
LEU CG C N N 291
LEU CD1 C N N 292
LEU CD2 C N N 293
LEU OXT O N N 294
LEU H H N N 295
LEU H2 H N N 296
LEU HA H N N 297
LEU HB2 H N N 298
LEU HB3 H N N 299
LEU HG H N N 300
LEU HD11 H N N 301
LEU HD12 H N N 302
LEU HD13 H N N 303
LEU HD21 H N N 304
LEU HD22 H N N 305
LEU HD23 H N N 306
LEU HXT H N N 307
LYS N N N N 308
LYS CA C N S 309
LYS C C N N 310
LYS O O N N 311
LYS CB C N N 312
LYS CG C N N 313
LYS CD C N N 314
LYS CE C N N 315
LYS NZ N N N 316
LYS OXT O N N 317
LYS H H N N 318
LYS H2 H N N 319
LYS HA H N N 320
LYS HB2 H N N 321
LYS HB3 H N N 322
LYS HG2 H N N 323
LYS HG3 H N N 324
LYS HD2 H N N 325
LYS HD3 H N N 326
LYS HE2 H N N 327
LYS HE3 H N N 328
LYS HZ1 H N N 329
LYS HZ2 H N N 330
LYS HZ3 H N N 331
LYS HXT H N N 332
MAN C1 C N S 333
MAN C2 C N S 334
MAN C3 C N S 335
MAN C4 C N S 336
MAN C5 C N R 337
MAN C6 C N N 338
MAN O1 O N N 339
MAN O2 O N N 340
MAN O3 O N N 341
MAN O4 O N N 342
MAN O5 O N N 343
MAN O6 O N N 344
MAN H1 H N N 345
MAN H2 H N N 346
MAN H3 H N N 347
MAN H4 H N N 348
MAN H5 H N N 349
MAN H61 H N N 350
MAN H62 H N N 351
MAN HO1 H N N 352
MAN HO2 H N N 353
MAN HO3 H N N 354
MAN HO4 H N N 355
MAN HO6 H N N 356
MET N N N N 357
MET CA C N S 358
MET C C N N 359
MET O O N N 360
MET CB C N N 361
MET CG C N N 362
MET SD S N N 363
MET CE C N N 364
MET OXT O N N 365
MET H H N N 366
MET H2 H N N 367
MET HA H N N 368
MET HB2 H N N 369
MET HB3 H N N 370
MET HG2 H N N 371
MET HG3 H N N 372
MET HE1 H N N 373
MET HE2 H N N 374
MET HE3 H N N 375
MET HXT H N N 376
NAG C1 C N R 377
NAG C2 C N R 378
NAG C3 C N R 379
NAG C4 C N S 380
NAG C5 C N R 381
NAG C6 C N N 382
NAG C7 C N N 383
NAG C8 C N N 384
NAG N2 N N N 385
NAG O1 O N N 386
NAG O3 O N N 387
NAG O4 O N N 388
NAG O5 O N N 389
NAG O6 O N N 390
NAG O7 O N N 391
NAG H1 H N N 392
NAG H2 H N N 393
NAG H3 H N N 394
NAG H4 H N N 395
NAG H5 H N N 396
NAG H61 H N N 397
NAG H62 H N N 398
NAG H81 H N N 399
NAG H82 H N N 400
NAG H83 H N N 401
NAG HN2 H N N 402
NAG HO1 H N N 403
NAG HO3 H N N 404
NAG HO4 H N N 405
NAG HO6 H N N 406
PHE N N N N 407
PHE CA C N S 408
PHE C C N N 409
PHE O O N N 410
PHE CB C N N 411
PHE CG C Y N 412
PHE CD1 C Y N 413
PHE CD2 C Y N 414
PHE CE1 C Y N 415
PHE CE2 C Y N 416
PHE CZ C Y N 417
PHE OXT O N N 418
PHE H H N N 419
PHE H2 H N N 420
PHE HA H N N 421
PHE HB2 H N N 422
PHE HB3 H N N 423
PHE HD1 H N N 424
PHE HD2 H N N 425
PHE HE1 H N N 426
PHE HE2 H N N 427
PHE HZ H N N 428
PHE HXT H N N 429
PRO N N N N 430
PRO CA C N S 431
PRO C C N N 432
PRO O O N N 433
PRO CB C N N 434
PRO CG C N N 435
PRO CD C N N 436
PRO OXT O N N 437
PRO H H N N 438
PRO HA H N N 439
PRO HB2 H N N 440
PRO HB3 H N N 441
PRO HG2 H N N 442
PRO HG3 H N N 443
PRO HD2 H N N 444
PRO HD3 H N N 445
PRO HXT H N N 446
SER N N N N 447
SER CA C N S 448
SER C C N N 449
SER O O N N 450
SER CB C N N 451
SER OG O N N 452
SER OXT O N N 453
SER H H N N 454
SER H2 H N N 455
SER HA H N N 456
SER HB2 H N N 457
SER HB3 H N N 458
SER HG H N N 459
SER HXT H N N 460
SIN C1 C N N 461
SIN O1 O N N 462
SIN O2 O N N 463
SIN C2 C N N 464
SIN C3 C N N 465
SIN C4 C N N 466
SIN O3 O N N 467
SIN O4 O N N 468
SIN HO2 H N N 469
SIN H21 H N N 470
SIN H22 H N N 471
SIN H31 H N N 472
SIN H32 H N N 473
SIN HO4 H N N 474
THR N N N N 475
THR CA C N S 476
THR C C N N 477
THR O O N N 478
THR CB C N R 479
THR OG1 O N N 480
THR CG2 C N N 481
THR OXT O N N 482
THR H H N N 483
THR H2 H N N 484
THR HA H N N 485
THR HB H N N 486
THR HG1 H N N 487
THR HG21 H N N 488
THR HG22 H N N 489
THR HG23 H N N 490
THR HXT H N N 491
TRP N N N N 492
TRP CA C N S 493
TRP C C N N 494
TRP O O N N 495
TRP CB C N N 496
TRP CG C Y N 497
TRP CD1 C Y N 498
TRP CD2 C Y N 499
TRP NE1 N Y N 500
TRP CE2 C Y N 501
TRP CE3 C Y N 502
TRP CZ2 C Y N 503
TRP CZ3 C Y N 504
TRP CH2 C Y N 505
TRP OXT O N N 506
TRP H H N N 507
TRP H2 H N N 508
TRP HA H N N 509
TRP HB2 H N N 510
TRP HB3 H N N 511
TRP HD1 H N N 512
TRP HE1 H N N 513
TRP HE3 H N N 514
TRP HZ2 H N N 515
TRP HZ3 H N N 516
TRP HH2 H N N 517
TRP HXT H N N 518
TYR N N N N 519
TYR CA C N S 520
TYR C C N N 521
TYR O O N N 522
TYR CB C N N 523
TYR CG C Y N 524
TYR CD1 C Y N 525
TYR CD2 C Y N 526
TYR CE1 C Y N 527
TYR CE2 C Y N 528
TYR CZ C Y N 529
TYR OH O N N 530
TYR OXT O N N 531
TYR H H N N 532
TYR H2 H N N 533
TYR HA H N N 534
TYR HB2 H N N 535
TYR HB3 H N N 536
TYR HD1 H N N 537
TYR HD2 H N N 538
TYR HE1 H N N 539
TYR HE2 H N N 540
TYR HH H N N 541
TYR HXT H N N 542
VAL N N N N 543
VAL CA C N S 544
VAL C C N N 545
VAL O O N N 546
VAL CB C N N 547
VAL CG1 C N N 548
VAL CG2 C N N 549
VAL OXT O N N 550
VAL H H N N 551
VAL H2 H N N 552
VAL HA H N N 553
VAL HB H N N 554
VAL HG11 H N N 555
VAL HG12 H N N 556
VAL HG13 H N N 557
VAL HG21 H N N 558
VAL HG22 H N N 559
VAL HG23 H N N 560
VAL HXT H N N 561
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
85G O C doub N N 1
85G CA C sing N N 2
85G CA N sing N N 3
85G CA CB sing N N 4
85G CG CB sing N N 5
85G CG CD sing N N 6
85G CD NM sing N N 7
85G CD OE1 doub N N 8
85G NM CY sing N N 9
85G CY CK sing N N 10
85G N H sing N N 11
85G N H2 sing N N 12
85G CA HA sing N N 13
85G CB H6 sing N N 14
85G CB H7 sing N N 15
85G CG H8 sing N N 16
85G CG H9 sing N N 17
85G CK H10 sing N N 18
85G CK H11 sing N N 19
85G CK H12 sing N N 20
85G CY H13 sing N N 21
85G CY H14 sing N N 22
85G NM H15 sing N N 23
85G C OXT sing N N 24
85G OXT HXT sing N N 25
85J CI CT sing N N 26
85J CT CZ sing N N 27
85J OE1 CD doub N N 28
85J O C doub N N 29
85J CZ NE2 sing N N 30
85J C CA sing N N 31
85J CA N sing N N 32
85J CA CB sing N N 33
85J CD NE2 sing N N 34
85J CD CG sing N N 35
85J CG CB sing N N 36
85J C OXT sing N N 37
85J N H2 sing N N 38
85J N H sing N N 39
85J CA HA sing N N 40
85J CB H5 sing N N 41
85J CB H6 sing N N 42
85J CG H7 sing N N 43
85J CG H8 sing N N 44
85J NE2 H9 sing N N 45
85J CZ H10 sing N N 46
85J CZ H11 sing N N 47
85J CT H12 sing N N 48
85J CT H13 sing N N 49
85J CI H14 sing N N 50
85J CI H15 sing N N 51
85J CI H16 sing N N 52
85J OXT HXT sing N N 53
ALA N CA sing N N 54
ALA N H sing N N 55
ALA N H2 sing N N 56
ALA CA C sing N N 57
ALA CA CB sing N N 58
ALA CA HA sing N N 59
ALA C O doub N N 60
ALA C OXT sing N N 61
ALA CB HB1 sing N N 62
ALA CB HB2 sing N N 63
ALA CB HB3 sing N N 64
ALA OXT HXT sing N N 65
ARG N CA sing N N 66
ARG N H sing N N 67
ARG N H2 sing N N 68
ARG CA C sing N N 69
ARG CA CB sing N N 70
ARG CA HA sing N N 71
ARG C O doub N N 72
ARG C OXT sing N N 73
ARG CB CG sing N N 74
ARG CB HB2 sing N N 75
ARG CB HB3 sing N N 76
ARG CG CD sing N N 77
ARG CG HG2 sing N N 78
ARG CG HG3 sing N N 79
ARG CD NE sing N N 80
ARG CD HD2 sing N N 81
ARG CD HD3 sing N N 82
ARG NE CZ sing N N 83
ARG NE HE sing N N 84
ARG CZ NH1 sing N N 85
ARG CZ NH2 doub N N 86
ARG NH1 HH11 sing N N 87
ARG NH1 HH12 sing N N 88
ARG NH2 HH21 sing N N 89
ARG NH2 HH22 sing N N 90
ARG OXT HXT sing N N 91
ASN N CA sing N N 92
ASN N H sing N N 93
ASN N H2 sing N N 94
ASN CA C sing N N 95
ASN CA CB sing N N 96
ASN CA HA sing N N 97
ASN C O doub N N 98
ASN C OXT sing N N 99
ASN CB CG sing N N 100
ASN CB HB2 sing N N 101
ASN CB HB3 sing N N 102
ASN CG OD1 doub N N 103
ASN CG ND2 sing N N 104
ASN ND2 HD21 sing N N 105
ASN ND2 HD22 sing N N 106
ASN OXT HXT sing N N 107
ASP N CA sing N N 108
ASP N H sing N N 109
ASP N H2 sing N N 110
ASP CA C sing N N 111
ASP CA CB sing N N 112
ASP CA HA sing N N 113
ASP C O doub N N 114
ASP C OXT sing N N 115
ASP CB CG sing N N 116
ASP CB HB2 sing N N 117
ASP CB HB3 sing N N 118
ASP CG OD1 doub N N 119
ASP CG OD2 sing N N 120
ASP OD2 HD2 sing N N 121
ASP OXT HXT sing N N 122
BMA C1 C2 sing N N 123
BMA C1 O1 sing N N 124
BMA C1 O5 sing N N 125
BMA C1 H1 sing N N 126
BMA C2 C3 sing N N 127
BMA C2 O2 sing N N 128
BMA C2 H2 sing N N 129
BMA C3 C4 sing N N 130
BMA C3 O3 sing N N 131
BMA C3 H3 sing N N 132
BMA C4 C5 sing N N 133
BMA C4 O4 sing N N 134
BMA C4 H4 sing N N 135
BMA C5 C6 sing N N 136
BMA C5 O5 sing N N 137
BMA C5 H5 sing N N 138
BMA C6 O6 sing N N 139
BMA C6 H61 sing N N 140
BMA C6 H62 sing N N 141
BMA O1 HO1 sing N N 142
BMA O2 HO2 sing N N 143
BMA O3 HO3 sing N N 144
BMA O4 HO4 sing N N 145
BMA O6 HO6 sing N N 146
CYS N CA sing N N 147
CYS N H sing N N 148
CYS N H2 sing N N 149
CYS CA C sing N N 150
CYS CA CB sing N N 151
CYS CA HA sing N N 152
CYS C O doub N N 153
CYS C OXT sing N N 154
CYS CB SG sing N N 155
CYS CB HB2 sing N N 156
CYS CB HB3 sing N N 157
CYS SG HG sing N N 158
CYS OXT HXT sing N N 159
GAL C1 C2 sing N N 160
GAL C1 O1 sing N N 161
GAL C1 O5 sing N N 162
GAL C1 H1 sing N N 163
GAL C2 C3 sing N N 164
GAL C2 O2 sing N N 165
GAL C2 H2 sing N N 166
GAL C3 C4 sing N N 167
GAL C3 O3 sing N N 168
GAL C3 H3 sing N N 169
GAL C4 C5 sing N N 170
GAL C4 O4 sing N N 171
GAL C4 H4 sing N N 172
GAL C5 C6 sing N N 173
GAL C5 O5 sing N N 174
GAL C5 H5 sing N N 175
GAL C6 O6 sing N N 176
GAL C6 H61 sing N N 177
GAL C6 H62 sing N N 178
GAL O1 HO1 sing N N 179
GAL O2 HO2 sing N N 180
GAL O3 HO3 sing N N 181
GAL O4 HO4 sing N N 182
GAL O6 HO6 sing N N 183
GLN N CA sing N N 184
GLN N H sing N N 185
GLN N H2 sing N N 186
GLN CA C sing N N 187
GLN CA CB sing N N 188
GLN CA HA sing N N 189
GLN C O doub N N 190
GLN C OXT sing N N 191
GLN CB CG sing N N 192
GLN CB HB2 sing N N 193
GLN CB HB3 sing N N 194
GLN CG CD sing N N 195
GLN CG HG2 sing N N 196
GLN CG HG3 sing N N 197
GLN CD OE1 doub N N 198
GLN CD NE2 sing N N 199
GLN NE2 HE21 sing N N 200
GLN NE2 HE22 sing N N 201
GLN OXT HXT sing N N 202
GLU N CA sing N N 203
GLU N H sing N N 204
GLU N H2 sing N N 205
GLU CA C sing N N 206
GLU CA CB sing N N 207
GLU CA HA sing N N 208
GLU C O doub N N 209
GLU C OXT sing N N 210
GLU CB CG sing N N 211
GLU CB HB2 sing N N 212
GLU CB HB3 sing N N 213
GLU CG CD sing N N 214
GLU CG HG2 sing N N 215
GLU CG HG3 sing N N 216
GLU CD OE1 doub N N 217
GLU CD OE2 sing N N 218
GLU OE2 HE2 sing N N 219
GLU OXT HXT sing N N 220
GLY N CA sing N N 221
GLY N H sing N N 222
GLY N H2 sing N N 223
GLY CA C sing N N 224
GLY CA HA2 sing N N 225
GLY CA HA3 sing N N 226
GLY C O doub N N 227
GLY C OXT sing N N 228
GLY OXT HXT sing N N 229
HIS N CA sing N N 230
HIS N H sing N N 231
HIS N H2 sing N N 232
HIS CA C sing N N 233
HIS CA CB sing N N 234
HIS CA HA sing N N 235
HIS C O doub N N 236
HIS C OXT sing N N 237
HIS CB CG sing N N 238
HIS CB HB2 sing N N 239
HIS CB HB3 sing N N 240
HIS CG ND1 sing Y N 241
HIS CG CD2 doub Y N 242
HIS ND1 CE1 doub Y N 243
HIS ND1 HD1 sing N N 244
HIS CD2 NE2 sing Y N 245
HIS CD2 HD2 sing N N 246
HIS CE1 NE2 sing Y N 247
HIS CE1 HE1 sing N N 248
HIS NE2 HE2 sing N N 249
HIS OXT HXT sing N N 250
HOH O H1 sing N N 251
HOH O H2 sing N N 252
ILE N CA sing N N 253
ILE N H sing N N 254
ILE N H2 sing N N 255
ILE CA C sing N N 256
ILE CA CB sing N N 257
ILE CA HA sing N N 258
ILE C O doub N N 259
ILE C OXT sing N N 260
ILE CB CG1 sing N N 261
ILE CB CG2 sing N N 262
ILE CB HB sing N N 263
ILE CG1 CD1 sing N N 264
ILE CG1 HG12 sing N N 265
ILE CG1 HG13 sing N N 266
ILE CG2 HG21 sing N N 267
ILE CG2 HG22 sing N N 268
ILE CG2 HG23 sing N N 269
ILE CD1 HD11 sing N N 270
ILE CD1 HD12 sing N N 271
ILE CD1 HD13 sing N N 272
ILE OXT HXT sing N N 273
LEU N CA sing N N 274
LEU N H sing N N 275
LEU N H2 sing N N 276
LEU CA C sing N N 277
LEU CA CB sing N N 278
LEU CA HA sing N N 279
LEU C O doub N N 280
LEU C OXT sing N N 281
LEU CB CG sing N N 282
LEU CB HB2 sing N N 283
LEU CB HB3 sing N N 284
LEU CG CD1 sing N N 285
LEU CG CD2 sing N N 286
LEU CG HG sing N N 287
LEU CD1 HD11 sing N N 288
LEU CD1 HD12 sing N N 289
LEU CD1 HD13 sing N N 290
LEU CD2 HD21 sing N N 291
LEU CD2 HD22 sing N N 292
LEU CD2 HD23 sing N N 293
LEU OXT HXT sing N N 294
LYS N CA sing N N 295
LYS N H sing N N 296
LYS N H2 sing N N 297
LYS CA C sing N N 298
LYS CA CB sing N N 299
LYS CA HA sing N N 300
LYS C O doub N N 301
LYS C OXT sing N N 302
LYS CB CG sing N N 303
LYS CB HB2 sing N N 304
LYS CB HB3 sing N N 305
LYS CG CD sing N N 306
LYS CG HG2 sing N N 307
LYS CG HG3 sing N N 308
LYS CD CE sing N N 309
LYS CD HD2 sing N N 310
LYS CD HD3 sing N N 311
LYS CE NZ sing N N 312
LYS CE HE2 sing N N 313
LYS CE HE3 sing N N 314
LYS NZ HZ1 sing N N 315
LYS NZ HZ2 sing N N 316
LYS NZ HZ3 sing N N 317
LYS OXT HXT sing N N 318
MAN C1 C2 sing N N 319
MAN C1 O1 sing N N 320
MAN C1 O5 sing N N 321
MAN C1 H1 sing N N 322
MAN C2 C3 sing N N 323
MAN C2 O2 sing N N 324
MAN C2 H2 sing N N 325
MAN C3 C4 sing N N 326
MAN C3 O3 sing N N 327
MAN C3 H3 sing N N 328
MAN C4 C5 sing N N 329
MAN C4 O4 sing N N 330
MAN C4 H4 sing N N 331
MAN C5 C6 sing N N 332
MAN C5 O5 sing N N 333
MAN C5 H5 sing N N 334
MAN C6 O6 sing N N 335
MAN C6 H61 sing N N 336
MAN C6 H62 sing N N 337
MAN O1 HO1 sing N N 338
MAN O2 HO2 sing N N 339
MAN O3 HO3 sing N N 340
MAN O4 HO4 sing N N 341
MAN O6 HO6 sing N N 342
MET N CA sing N N 343
MET N H sing N N 344
MET N H2 sing N N 345
MET CA C sing N N 346
MET CA CB sing N N 347
MET CA HA sing N N 348
MET C O doub N N 349
MET C OXT sing N N 350
MET CB CG sing N N 351
MET CB HB2 sing N N 352
MET CB HB3 sing N N 353
MET CG SD sing N N 354
MET CG HG2 sing N N 355
MET CG HG3 sing N N 356
MET SD CE sing N N 357
MET CE HE1 sing N N 358
MET CE HE2 sing N N 359
MET CE HE3 sing N N 360
MET OXT HXT sing N N 361
NAG C1 C2 sing N N 362
NAG C1 O1 sing N N 363
NAG C1 O5 sing N N 364
NAG C1 H1 sing N N 365
NAG C2 C3 sing N N 366
NAG C2 N2 sing N N 367
NAG C2 H2 sing N N 368
NAG C3 C4 sing N N 369
NAG C3 O3 sing N N 370
NAG C3 H3 sing N N 371
NAG C4 C5 sing N N 372
NAG C4 O4 sing N N 373
NAG C4 H4 sing N N 374
NAG C5 C6 sing N N 375
NAG C5 O5 sing N N 376
NAG C5 H5 sing N N 377
NAG C6 O6 sing N N 378
NAG C6 H61 sing N N 379
NAG C6 H62 sing N N 380
NAG C7 C8 sing N N 381
NAG C7 N2 sing N N 382
NAG C7 O7 doub N N 383
NAG C8 H81 sing N N 384
NAG C8 H82 sing N N 385
NAG C8 H83 sing N N 386
NAG N2 HN2 sing N N 387
NAG O1 HO1 sing N N 388
NAG O3 HO3 sing N N 389
NAG O4 HO4 sing N N 390
NAG O6 HO6 sing N N 391
PHE N CA sing N N 392
PHE N H sing N N 393
PHE N H2 sing N N 394
PHE CA C sing N N 395
PHE CA CB sing N N 396
PHE CA HA sing N N 397
PHE C O doub N N 398
PHE C OXT sing N N 399
PHE CB CG sing N N 400
PHE CB HB2 sing N N 401
PHE CB HB3 sing N N 402
PHE CG CD1 doub Y N 403
PHE CG CD2 sing Y N 404
PHE CD1 CE1 sing Y N 405
PHE CD1 HD1 sing N N 406
PHE CD2 CE2 doub Y N 407
PHE CD2 HD2 sing N N 408
PHE CE1 CZ doub Y N 409
PHE CE1 HE1 sing N N 410
PHE CE2 CZ sing Y N 411
PHE CE2 HE2 sing N N 412
PHE CZ HZ sing N N 413
PHE OXT HXT sing N N 414
PRO N CA sing N N 415
PRO N CD sing N N 416
PRO N H sing N N 417
PRO CA C sing N N 418
PRO CA CB sing N N 419
PRO CA HA sing N N 420
PRO C O doub N N 421
PRO C OXT sing N N 422
PRO CB CG sing N N 423
PRO CB HB2 sing N N 424
PRO CB HB3 sing N N 425
PRO CG CD sing N N 426
PRO CG HG2 sing N N 427
PRO CG HG3 sing N N 428
PRO CD HD2 sing N N 429
PRO CD HD3 sing N N 430
PRO OXT HXT sing N N 431
SER N CA sing N N 432
SER N H sing N N 433
SER N H2 sing N N 434
SER CA C sing N N 435
SER CA CB sing N N 436
SER CA HA sing N N 437
SER C O doub N N 438
SER C OXT sing N N 439
SER CB OG sing N N 440
SER CB HB2 sing N N 441
SER CB HB3 sing N N 442
SER OG HG sing N N 443
SER OXT HXT sing N N 444
SIN C1 O1 doub N N 445
SIN C1 O2 sing N N 446
SIN C1 C2 sing N N 447
SIN O2 HO2 sing N N 448
SIN C2 C3 sing N N 449
SIN C2 H21 sing N N 450
SIN C2 H22 sing N N 451
SIN C3 C4 sing N N 452
SIN C3 H31 sing N N 453
SIN C3 H32 sing N N 454
SIN C4 O3 doub N N 455
SIN C4 O4 sing N N 456
SIN O4 HO4 sing N N 457
THR N CA sing N N 458
THR N H sing N N 459
THR N H2 sing N N 460
THR CA C sing N N 461
THR CA CB sing N N 462
THR CA HA sing N N 463
THR C O doub N N 464
THR C OXT sing N N 465
THR CB OG1 sing N N 466
THR CB CG2 sing N N 467
THR CB HB sing N N 468
THR OG1 HG1 sing N N 469
THR CG2 HG21 sing N N 470
THR CG2 HG22 sing N N 471
THR CG2 HG23 sing N N 472
THR OXT HXT sing N N 473
TRP N CA sing N N 474
TRP N H sing N N 475
TRP N H2 sing N N 476
TRP CA C sing N N 477
TRP CA CB sing N N 478
TRP CA HA sing N N 479
TRP C O doub N N 480
TRP C OXT sing N N 481
TRP CB CG sing N N 482
TRP CB HB2 sing N N 483
TRP CB HB3 sing N N 484
TRP CG CD1 doub Y N 485
TRP CG CD2 sing Y N 486
TRP CD1 NE1 sing Y N 487
TRP CD1 HD1 sing N N 488
TRP CD2 CE2 doub Y N 489
TRP CD2 CE3 sing Y N 490
TRP NE1 CE2 sing Y N 491
TRP NE1 HE1 sing N N 492
TRP CE2 CZ2 sing Y N 493
TRP CE3 CZ3 doub Y N 494
TRP CE3 HE3 sing N N 495
TRP CZ2 CH2 doub Y N 496
TRP CZ2 HZ2 sing N N 497
TRP CZ3 CH2 sing Y N 498
TRP CZ3 HZ3 sing N N 499
TRP CH2 HH2 sing N N 500
TRP OXT HXT sing N N 501
TYR N CA sing N N 502
TYR N H sing N N 503
TYR N H2 sing N N 504
TYR CA C sing N N 505
TYR CA CB sing N N 506
TYR CA HA sing N N 507
TYR C O doub N N 508
TYR C OXT sing N N 509
TYR CB CG sing N N 510
TYR CB HB2 sing N N 511
TYR CB HB3 sing N N 512
TYR CG CD1 doub Y N 513
TYR CG CD2 sing Y N 514
TYR CD1 CE1 sing Y N 515
TYR CD1 HD1 sing N N 516
TYR CD2 CE2 doub Y N 517
TYR CD2 HD2 sing N N 518
TYR CE1 CZ doub Y N 519
TYR CE1 HE1 sing N N 520
TYR CE2 CZ sing Y N 521
TYR CE2 HE2 sing N N 522
TYR CZ OH sing N N 523
TYR OH HH sing N N 524
TYR OXT HXT sing N N 525
VAL N CA sing N N 526
VAL N H sing N N 527
VAL N H2 sing N N 528
VAL CA C sing N N 529
VAL CA CB sing N N 530
VAL CA HA sing N N 531
VAL C O doub N N 532
VAL C OXT sing N N 533
VAL CB CG1 sing N N 534
VAL CB CG2 sing N N 535
VAL CB HB sing N N 536
VAL CG1 HG11 sing N N 537
VAL CG1 HG12 sing N N 538
VAL CG1 HG13 sing N N 539
VAL CG2 HG21 sing N N 540
VAL CG2 HG22 sing N N 541
VAL CG2 HG23 sing N N 542
VAL OXT HXT sing N N 543
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
C 3 NAG 1 C NAG 1 A NAG 501 n
C 3 NAG 2 C NAG 2 A NAG 502 n
C 3 BMA 3 C BMA 3 A BMA 503 n
C 3 MAN 4 C MAN 4 A MAN 504 n
C 3 NAG 5 C NAG 5 A NAG 505 n
C 3 GAL 6 C GAL 6 A GAL 507 n
C 3 MAN 7 C MAN 7 A MAN 506 n
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb
BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose
BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp
BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man
GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb
GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose
GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp
GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal
MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa
MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose
MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp
MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man
NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb
NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine
NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc
NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
_pdbx_entity_branch.entity_id 3
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 3 'DGalpb1-4DGlcpNAcb1-2DManpa1-6[DManpa1-3]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0
2 3
;WURCS=2.0/4,7,6/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5]/1-1-2-3-3-1-4/a4-b1_b4-c1_c3-d1_c6-e1_e2-f1_f4-g1
;
WURCS PDB2Glycan 1.1.0
3 3
;[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{}}}}}}}
;
LINUCS PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ?
2 3 3 BMA C1 O1 2 NAG O4 HO4 sing ?
3 3 4 MAN C1 O1 3 BMA O6 HO6 sing ?
4 3 5 NAG C1 O1 4 MAN O2 HO2 sing ?
5 3 6 GAL C1 O1 5 NAG O4 HO4 sing ?
6 3 7 MAN C1 O1 3 BMA O3 HO3 sing ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
3 NAG 1 n
3 NAG 2 n
3 BMA 3 n
3 MAN 4 n
3 NAG 5 n
3 GAL 6 n
3 MAN 7 n
#
_pdbx_entity_nonpoly.entity_id 4
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 5U52
_pdbx_initial_refinement_model.details ?
#