HEADER TRANSCRIPTION 16-DEC-16 5U9E TITLE STRUCTURE OF THE REGULATORY DOMAIN OF THE ARAC FAMILY TRANSCRIPTIONAL TITLE 2 ACTIVATOR RHAR COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 3-165; COMPND 5 SYNONYM: L-RHAMNOSE OPERON TRANSCRIPTIONAL ACTIVATOR RHAR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTERIA LATREILLE ET AL. 1825; SOURCE 3 ORGANISM_TAXID: 629395; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET24B KEYWDS ARAC FAMILY, TRANSCRIPTIONAL ACTIVATOR, RHAR, REGULATORY DOMAIN., KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR H.ZHAO REVDAT 3 04-OCT-23 5U9E 1 HETSYN REVDAT 2 29-JUL-20 5U9E 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 20-DEC-17 5U9E 0 JRNL AUTH J.LIN,H.ZHAO,D.SHAATH,G.WEHMEYE,A.KOLIN,S.EGAN JRNL TITL STRUCTURE OF THE REGULATORY DOMAIN OF THE ARAC FAMILY JRNL TITL 2 TRANSCRIPTIONAL ACTIVATOR RHAR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.210 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 61172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3057 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7827 - 5.6116 1.00 2658 143 0.1847 0.1889 REMARK 3 2 5.6116 - 4.4710 1.00 2639 137 0.1590 0.2022 REMARK 3 3 4.4710 - 3.9108 1.00 2667 137 0.1416 0.1777 REMARK 3 4 3.9108 - 3.5555 1.00 2643 131 0.1525 0.1709 REMARK 3 5 3.5555 - 3.3019 1.00 2638 142 0.1515 0.1709 REMARK 3 6 3.3019 - 3.1080 1.00 2678 139 0.1581 0.2026 REMARK 3 7 3.1080 - 2.9529 1.00 2630 137 0.1552 0.1699 REMARK 3 8 2.9529 - 2.8248 1.00 2669 148 0.1664 0.1851 REMARK 3 9 2.8248 - 2.7163 1.00 2595 154 0.1682 0.2028 REMARK 3 10 2.7163 - 2.6228 1.00 2670 144 0.1687 0.2233 REMARK 3 11 2.6228 - 2.5409 1.00 2667 132 0.1690 0.2240 REMARK 3 12 2.5409 - 2.4684 1.00 2663 128 0.1680 0.1897 REMARK 3 13 2.4684 - 2.4036 1.00 2629 156 0.1747 0.2208 REMARK 3 14 2.4036 - 2.3450 1.00 2656 110 0.1779 0.2523 REMARK 3 15 2.3450 - 2.2918 1.00 2663 146 0.1744 0.1819 REMARK 3 16 2.2918 - 2.2431 1.00 2652 121 0.1788 0.2357 REMARK 3 17 2.2431 - 2.1983 1.00 2630 152 0.1789 0.2416 REMARK 3 18 2.1983 - 2.1569 1.00 2689 122 0.1780 0.2104 REMARK 3 19 2.1569 - 2.1184 1.00 2650 149 0.1800 0.2198 REMARK 3 20 2.1184 - 2.0825 1.00 2652 151 0.2007 0.1822 REMARK 3 21 2.0825 - 2.0490 0.98 2580 149 0.2174 0.2510 REMARK 3 22 2.0490 - 2.0175 0.95 2497 129 0.2491 0.3021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2618 REMARK 3 ANGLE : 1.079 3549 REMARK 3 CHIRALITY : 0.079 384 REMARK 3 PLANARITY : 0.004 462 REMARK 3 DIHEDRAL : 14.473 929 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 3:165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.016 65.089 40.185 REMARK 3 T TENSOR REMARK 3 T11: 0.2437 T22: 0.1976 REMARK 3 T33: 0.1869 T12: -0.0479 REMARK 3 T13: -0.0005 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 3.2147 L22: 4.2212 REMARK 3 L33: 2.3732 L12: -0.1614 REMARK 3 L13: 0.3350 L23: 0.5101 REMARK 3 S TENSOR REMARK 3 S11: 0.0494 S12: -0.3513 S13: 0.4070 REMARK 3 S21: 0.0862 S22: 0.0562 S23: -0.2184 REMARK 3 S31: -0.3312 S32: 0.1991 S33: -0.0670 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 5:165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.216 36.665 24.504 REMARK 3 T TENSOR REMARK 3 T11: 0.3916 T22: 0.2023 REMARK 3 T33: 0.3180 T12: 0.0827 REMARK 3 T13: -0.0299 T23: -0.0281 REMARK 3 L TENSOR REMARK 3 L11: 3.4009 L22: 4.0967 REMARK 3 L33: 1.5540 L12: -1.5660 REMARK 3 L13: 0.3251 L23: -0.1238 REMARK 3 S TENSOR REMARK 3 S11: 0.1327 S12: 0.2872 S13: -0.6824 REMARK 3 S21: -0.3911 S22: -0.0926 S23: 0.1423 REMARK 3 S31: 0.3348 S32: 0.1109 S33: -0.0013 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 201:201 ) OR ( CHAIN B AND RESID REMARK 3 301:301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.128 50.038 33.571 REMARK 3 T TENSOR REMARK 3 T11: 0.3360 T22: 0.2961 REMARK 3 T33: 0.4764 T12: -0.2496 REMARK 3 T13: 0.5036 T23: -0.0447 REMARK 3 L TENSOR REMARK 3 L11: 1.0246 L22: 0.0028 REMARK 3 L33: 0.5016 L12: -0.0383 REMARK 3 L13: -0.2971 L23: -0.0240 REMARK 3 S TENSOR REMARK 3 S11: 0.6108 S12: 0.0789 S13: 0.3520 REMARK 3 S21: 0.1913 S22: 0.2060 S23: -0.0521 REMARK 3 S31: -0.1543 S32: 0.1594 S33: 0.3087 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U9E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225537. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03324 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61172 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 28.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.50200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5U93 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES PH 6.0, 50 MM CA(OAC)2, 12 REMARK 280 % PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.60200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.30900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.30900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.40300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.30900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.30900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.80100 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.30900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.30900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 71.40300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.30900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.30900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 23.80100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 47.60200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 25 REMARK 465 VAL A 26 REMARK 465 PRO A 27 REMARK 465 GLN A 28 REMARK 465 ASP A 29 REMARK 465 HIS B 3 REMARK 465 GLN B 4 REMARK 465 ARG B 25 REMARK 465 VAL B 26 REMARK 465 PRO B 27 REMARK 465 GLN B 28 REMARK 465 ASP B 29 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS B 140 O HOH B 401 1.97 REMARK 500 OD1 ASP A 71 O HOH A 301 1.97 REMARK 500 O HOH A 390 O HOH A 400 1.98 REMARK 500 O HOH B 474 O HOH B 483 2.02 REMARK 500 O HOH A 394 O HOH A 399 2.07 REMARK 500 O HOH B 476 O HOH B 478 2.10 REMARK 500 O HOH B 450 O HOH B 473 2.11 REMARK 500 O HOH A 334 O HOH A 393 2.12 REMARK 500 ND2 ASN B 145 O HOH B 402 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 304 O HOH A 312 4455 2.11 REMARK 500 O HOH B 436 O HOH B 479 3554 2.13 REMARK 500 OD1 ASP A 99 NH1 ARG A 127 3554 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 97 45.86 -87.87 REMARK 500 ASN B 97 30.90 -80.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 202 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 34 NE2 REMARK 620 2 HIS A 36 NE2 91.8 REMARK 620 3 GLU A 40 OE2 170.2 96.6 REMARK 620 4 HIS A 74 NE2 87.5 95.7 86.8 REMARK 620 5 RM4 A 201 O3 87.9 169.8 84.6 94.4 REMARK 620 6 RM4 A 201 O4 87.5 93.5 96.7 169.7 76.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 302 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 34 NE2 REMARK 620 2 HIS B 36 NE2 88.1 REMARK 620 3 GLU B 40 OE2 173.8 92.1 REMARK 620 4 HIS B 74 NE2 87.9 87.0 85.9 REMARK 620 5 RM4 B 301 O3 91.7 174.7 88.6 98.3 REMARK 620 6 RM4 B 301 O4 87.7 96.1 98.5 174.5 78.6 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5U93 RELATED DB: PDB DBREF 5U9E A 3 165 UNP C5A074 RHAR_ECOBW 3 165 DBREF 5U9E B 3 165 UNP C5A074 RHAR_ECOBW 3 165 SEQADV 5U9E VAL A 26 UNP C5A074 TYR 26 CONFLICT SEQADV 5U9E VAL B 26 UNP C5A074 TYR 26 CONFLICT SEQRES 1 A 163 HIS GLN LEU LYS LEU LEU LYS ASP ASP PHE PHE ALA SER SEQRES 2 A 163 ASP GLN GLN ALA VAL ALA VAL ALA ASP ARG VAL PRO GLN SEQRES 3 A 163 ASP VAL PHE ALA GLU HIS THR HIS ASP PHE CYS GLU LEU SEQRES 4 A 163 VAL ILE VAL TRP ARG GLY ASN GLY LEU HIS VAL LEU ASN SEQRES 5 A 163 ASP ARG PRO TYR ARG ILE THR ARG GLY ASP LEU PHE TYR SEQRES 6 A 163 ILE HIS ALA ASP ASP LYS HIS SER TYR ALA SER VAL ASN SEQRES 7 A 163 ASP LEU VAL LEU GLN ASN ILE ILE TYR CYS PRO GLU ARG SEQRES 8 A 163 LEU LYS LEU ASN LEU ASP TRP GLN GLY ALA ILE PRO GLY SEQRES 9 A 163 PHE ASN ALA SER ALA GLY GLN PRO HIS TRP ARG LEU GLY SEQRES 10 A 163 SER MET GLY MET ALA GLN ALA ARG GLN VAL ILE GLY GLN SEQRES 11 A 163 LEU GLU HIS GLU SER SER GLN HIS VAL PRO PHE ALA ASN SEQRES 12 A 163 GLU MET ALA GLU LEU LEU PHE GLY GLN LEU VAL MET LEU SEQRES 13 A 163 LEU ASN ARG HIS ARG TYR THR SEQRES 1 B 163 HIS GLN LEU LYS LEU LEU LYS ASP ASP PHE PHE ALA SER SEQRES 2 B 163 ASP GLN GLN ALA VAL ALA VAL ALA ASP ARG VAL PRO GLN SEQRES 3 B 163 ASP VAL PHE ALA GLU HIS THR HIS ASP PHE CYS GLU LEU SEQRES 4 B 163 VAL ILE VAL TRP ARG GLY ASN GLY LEU HIS VAL LEU ASN SEQRES 5 B 163 ASP ARG PRO TYR ARG ILE THR ARG GLY ASP LEU PHE TYR SEQRES 6 B 163 ILE HIS ALA ASP ASP LYS HIS SER TYR ALA SER VAL ASN SEQRES 7 B 163 ASP LEU VAL LEU GLN ASN ILE ILE TYR CYS PRO GLU ARG SEQRES 8 B 163 LEU LYS LEU ASN LEU ASP TRP GLN GLY ALA ILE PRO GLY SEQRES 9 B 163 PHE ASN ALA SER ALA GLY GLN PRO HIS TRP ARG LEU GLY SEQRES 10 B 163 SER MET GLY MET ALA GLN ALA ARG GLN VAL ILE GLY GLN SEQRES 11 B 163 LEU GLU HIS GLU SER SER GLN HIS VAL PRO PHE ALA ASN SEQRES 12 B 163 GLU MET ALA GLU LEU LEU PHE GLY GLN LEU VAL MET LEU SEQRES 13 B 163 LEU ASN ARG HIS ARG TYR THR HET RM4 A 201 11 HET NI A 202 1 HET RM4 B 301 11 HET NI B 302 1 HETNAM RM4 BETA-L-RHAMNOPYRANOSE HETNAM NI NICKEL (II) ION HETSYN RM4 BETA-L-RHAMNOSE; 6-DEOXY-BETA-L-MANNOPYRANOSE; L- HETSYN 2 RM4 RHAMNOSE; RHAMNOSE FORMUL 3 RM4 2(C6 H12 O5) FORMUL 4 NI 2(NI 2+) FORMUL 7 HOH *194(H2 O) HELIX 1 AA1 LEU A 8 PHE A 13 1 6 HELIX 2 AA2 PRO A 91 LEU A 94 5 4 HELIX 3 AA3 ASP A 99 ILE A 104 1 6 HELIX 4 AA4 GLY A 119 GLU A 136 1 18 HELIX 5 AA5 PHE A 143 HIS A 162 1 20 HELIX 6 AA6 LEU B 8 PHE B 13 1 6 HELIX 7 AA7 PRO B 91 LEU B 94 5 4 HELIX 8 AA8 ASP B 99 ILE B 104 1 6 HELIX 9 AA9 GLY B 119 HIS B 135 1 17 HELIX 10 AB1 PHE B 143 ARG B 163 1 21 SHEET 1 AA1 5 LYS A 6 LEU A 7 0 SHEET 2 AA1 5 PHE A 31 HIS A 36 1 O THR A 35 N LEU A 7 SHEET 3 AA1 5 HIS A 74 TYR A 89 -1 O HIS A 74 N HIS A 34 SHEET 4 AA1 5 CYS A 39 LEU A 53 -1 N LEU A 50 O ALA A 77 SHEET 5 AA1 5 ARG A 56 THR A 61 -1 O TYR A 58 N HIS A 51 SHEET 1 AA2 6 VAL A 20 VAL A 22 0 SHEET 2 AA2 6 HIS A 74 TYR A 89 -1 O ILE A 88 N ALA A 21 SHEET 3 AA2 6 CYS A 39 LEU A 53 -1 N LEU A 50 O ALA A 77 SHEET 4 AA2 6 ASP A 64 ILE A 68 -1 O PHE A 66 N VAL A 42 SHEET 5 AA2 6 HIS A 115 LEU A 118 -1 O TRP A 116 N LEU A 65 SHEET 6 AA2 6 ARG A 163 TYR A 164 -1 O TYR A 164 N ARG A 117 SHEET 1 AA3 5 LYS B 6 LEU B 7 0 SHEET 2 AA3 5 PHE B 31 HIS B 36 1 O THR B 35 N LEU B 7 SHEET 3 AA3 5 HIS B 74 TYR B 89 -1 O HIS B 74 N HIS B 34 SHEET 4 AA3 5 CYS B 39 LEU B 53 -1 N LEU B 41 O ILE B 87 SHEET 5 AA3 5 ARG B 56 THR B 61 -1 O TYR B 58 N HIS B 51 SHEET 1 AA4 5 VAL B 20 VAL B 22 0 SHEET 2 AA4 5 HIS B 74 TYR B 89 -1 O ILE B 88 N ALA B 21 SHEET 3 AA4 5 CYS B 39 LEU B 53 -1 N LEU B 41 O ILE B 87 SHEET 4 AA4 5 ASP B 64 ILE B 68 -1 O ILE B 68 N GLU B 40 SHEET 5 AA4 5 HIS B 115 ARG B 117 -1 O TRP B 116 N LEU B 65 LINK NE2 HIS A 34 NI NI A 202 1555 1555 2.27 LINK NE2 HIS A 36 NI NI A 202 1555 1555 2.11 LINK OE2 GLU A 40 NI NI A 202 1555 1555 2.28 LINK NE2 HIS A 74 NI NI A 202 1555 1555 2.14 LINK O3 RM4 A 201 NI NI A 202 1555 1555 2.18 LINK O4 RM4 A 201 NI NI A 202 1555 1555 2.22 LINK NE2 HIS B 34 NI NI B 302 1555 1555 2.36 LINK NE2 HIS B 36 NI NI B 302 1555 1555 2.29 LINK OE2 GLU B 40 NI NI B 302 1555 1555 2.32 LINK NE2 HIS B 74 NI NI B 302 1555 1555 2.18 LINK O3 RM4 B 301 NI NI B 302 1555 1555 2.10 LINK O4 RM4 B 301 NI NI B 302 1555 1555 2.02 CRYST1 100.618 100.618 95.204 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009939 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009939 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010504 0.00000