HEADER UNKNOWN FUNCTION 22-JAN-17 5UKH TITLE STRUCTURE OF TELC FROM STREPTOCOCCUS INTERMEDIUS B196 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 201-552; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS INTERMEDIUS B196; SOURCE 3 ORGANISM_TAXID: 862967; SOURCE 4 GENE: SIR_1489; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ANTIBACTERIAL EFFECTOR PROTEIN, LIPID II PHOSPHATASE, TYPE VII KEYWDS 2 SECRETION, ESX SECRETION, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.C.WHITNEY,M.Q.CHING,D.BRYANT,J.D.MOUGOUS REVDAT 2 11-DEC-19 5UKH 1 REMARK REVDAT 1 26-JUL-17 5UKH 0 JRNL AUTH J.C.WHITNEY,S.B.PETERSON,J.KIM,M.PAZOS,A.J.VERSTER, JRNL AUTH 2 M.C.RADEY,H.D.KULASEKARA,M.Q.CHING,N.P.BULLEN,D.BRYANT, JRNL AUTH 3 Y.A.GOO,M.G.SURETTE,E.BORENSTEIN,W.VOLLMER,J.D.MOUGOUS JRNL TITL A BROADLY DISTRIBUTED TOXIN FAMILY MEDIATES JRNL TITL 2 CONTACT-DEPENDENT ANTAGONISM BETWEEN GRAM-POSITIVE BACTERIA. JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28696203 JRNL DOI 10.7554/ELIFE.26938 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 3 NUMBER OF REFLECTIONS : 30558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.690 REMARK 3 FREE R VALUE TEST SET COUNT : 1740 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2182 - 4.5320 1.00 2887 172 0.1876 0.1855 REMARK 3 2 4.5320 - 3.5976 0.99 2748 170 0.1717 0.1949 REMARK 3 3 3.5976 - 3.1429 0.98 2697 155 0.1999 0.2494 REMARK 3 4 3.1429 - 2.8556 0.94 2558 154 0.2273 0.2814 REMARK 3 5 2.8556 - 2.6509 0.92 2499 151 0.2228 0.2590 REMARK 3 6 2.6509 - 2.4946 0.90 2452 146 0.2303 0.2588 REMARK 3 7 2.4946 - 2.3697 0.86 2333 136 0.2506 0.2617 REMARK 3 8 2.3697 - 2.2665 0.84 2276 138 0.2794 0.3246 REMARK 3 9 2.2665 - 2.1793 0.82 2223 136 0.3130 0.3751 REMARK 3 10 2.1793 - 2.1041 0.81 2176 145 0.3532 0.3366 REMARK 3 11 2.1041 - 2.0383 0.75 2043 120 0.4147 0.4442 REMARK 3 12 2.0383 - 1.9800 0.72 1926 117 0.4545 0.4587 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2586 REMARK 3 ANGLE : 0.884 3492 REMARK 3 CHIRALITY : 0.044 375 REMARK 3 PLANARITY : 0.006 449 REMARK 3 DIHEDRAL : 12.879 1540 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 212 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.3051 41.9070 50.9509 REMARK 3 T TENSOR REMARK 3 T11: 0.8448 T22: 0.6499 REMARK 3 T33: 0.4515 T12: 0.1738 REMARK 3 T13: -0.1291 T23: -0.0307 REMARK 3 L TENSOR REMARK 3 L11: 6.0583 L22: 3.4174 REMARK 3 L33: 2.7403 L12: 0.8736 REMARK 3 L13: -1.0085 L23: -0.7911 REMARK 3 S TENSOR REMARK 3 S11: 0.3985 S12: -0.6489 S13: -0.7534 REMARK 3 S21: 0.6187 S22: -0.1183 S23: -0.9715 REMARK 3 S31: 0.8738 S32: 1.1817 S33: -0.1881 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 328 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9999 55.0535 31.5621 REMARK 3 T TENSOR REMARK 3 T11: 0.5617 T22: 0.3025 REMARK 3 T33: 0.3598 T12: 0.0255 REMARK 3 T13: -0.0069 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 2.3400 L22: 2.3883 REMARK 3 L33: 5.2824 L12: -0.0637 REMARK 3 L13: -1.6288 L23: -0.7667 REMARK 3 S TENSOR REMARK 3 S11: 0.1683 S12: 0.3685 S13: 0.3518 REMARK 3 S21: -0.3242 S22: -0.0052 S23: -0.3228 REMARK 3 S31: -0.3248 S32: 0.3074 S33: -0.1442 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 329 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5072 31.8467 36.5763 REMARK 3 T TENSOR REMARK 3 T11: 0.7287 T22: 0.3566 REMARK 3 T33: 0.2869 T12: 0.0192 REMARK 3 T13: -0.0097 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 2.4170 L22: 3.0780 REMARK 3 L33: 4.1331 L12: -1.0584 REMARK 3 L13: -2.4493 L23: 1.1467 REMARK 3 S TENSOR REMARK 3 S11: -0.2954 S12: 0.3201 S13: -0.2423 REMARK 3 S21: 0.0401 S22: -0.0650 S23: 0.3083 REMARK 3 S31: 0.5841 S32: -0.5041 S33: 0.3439 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 394 THROUGH 413 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2680 48.9149 45.1280 REMARK 3 T TENSOR REMARK 3 T11: 0.5704 T22: 0.3070 REMARK 3 T33: 0.2720 T12: 0.1043 REMARK 3 T13: -0.0127 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 4.2642 L22: 7.0809 REMARK 3 L33: 6.2380 L12: 2.6918 REMARK 3 L13: -2.5095 L23: -1.4898 REMARK 3 S TENSOR REMARK 3 S11: 0.2063 S12: -0.0356 S13: 0.1838 REMARK 3 S21: 0.9008 S22: -0.1968 S23: -0.1719 REMARK 3 S31: -0.7619 S32: 0.1575 S33: -0.0700 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 414 THROUGH 488 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6078 54.3996 49.1396 REMARK 3 T TENSOR REMARK 3 T11: 0.7483 T22: 0.2682 REMARK 3 T33: 0.2817 T12: 0.0683 REMARK 3 T13: -0.0534 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 4.2542 L22: 4.3141 REMARK 3 L33: 2.1922 L12: 0.3732 REMARK 3 L13: -1.6108 L23: 0.7780 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: 0.2304 S13: 0.2921 REMARK 3 S21: 0.0020 S22: 0.1156 S23: 0.0843 REMARK 3 S31: -0.2889 S32: -0.1506 S33: -0.0063 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 489 THROUGH 550 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7667 56.0139 54.4811 REMARK 3 T TENSOR REMARK 3 T11: 0.7076 T22: 0.5388 REMARK 3 T33: 0.4130 T12: 0.0442 REMARK 3 T13: 0.0401 T23: -0.1277 REMARK 3 L TENSOR REMARK 3 L11: 7.7231 L22: 1.4166 REMARK 3 L33: 2.2899 L12: 0.8640 REMARK 3 L13: 4.2245 L23: 0.2029 REMARK 3 S TENSOR REMARK 3 S11: -0.2014 S12: -0.5641 S13: 0.4866 REMARK 3 S21: 0.3761 S22: -0.0422 S23: 0.3248 REMARK 3 S31: -0.0682 S32: -0.5807 S33: 0.2307 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UKH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000226033. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34824 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 49.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 25.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE PH 4.6, 0.1 M REMARK 280 CACL2, 30% PEG400, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.12900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.12900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 63.69150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.34450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 63.69150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.34450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.12900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 63.69150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.34450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 29.12900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 63.69150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 66.34450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 602 LIES ON A SPECIAL POSITION. REMARK 375 CA CA A 603 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 714 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 188 REMARK 465 GLY A 189 REMARK 465 SER A 190 REMARK 465 SER A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 465 HIS A 197 REMARK 465 SER A 198 REMARK 465 GLN A 199 REMARK 465 ASP A 200 REMARK 465 PRO A 201 REMARK 465 SER A 202 REMARK 465 ASP A 203 REMARK 465 LEU A 204 REMARK 465 SER A 205 REMARK 465 TRP A 206 REMARK 465 SER A 207 REMARK 465 LYS A 208 REMARK 465 ARG A 209 REMARK 465 LEU A 210 REMARK 465 SER A 211 REMARK 465 SER A 417 REMARK 465 VAL A 418 REMARK 465 GLN A 419 REMARK 465 LEU A 420 REMARK 465 SER A 421 REMARK 465 ASP A 422 REMARK 465 ILE A 423 REMARK 465 TYR A 424 REMARK 465 GLY A 425 REMARK 465 GLY A 426 REMARK 465 ARG A 427 REMARK 465 LYS A 428 REMARK 465 HIS A 429 REMARK 465 VAL A 430 REMARK 465 LYS A 431 REMARK 465 ASN A 432 REMARK 465 LEU A 433 REMARK 465 ALA A 434 REMARK 465 GLY A 551 REMARK 465 GLN A 552 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 286 CG CD CE NZ REMARK 470 VAL A 307 CG1 CG2 REMARK 470 GLU A 310 CG CD OE1 OE2 REMARK 470 GLN A 312 CG CD OE1 NE2 REMARK 470 GLN A 359 CG CD OE1 NE2 REMARK 470 LYS A 383 CG CD CE NZ REMARK 470 ASN A 443 CG OD1 ND2 REMARK 470 ASN A 445 CG OD1 ND2 REMARK 470 GLU A 446 CG CD OE1 OE2 REMARK 470 ARG A 447 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 448 CG CD CE NZ REMARK 470 LYS A 470 CG CD CE NZ REMARK 470 LYS A 533 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 711 O HOH A 826 1.96 REMARK 500 O HOH A 774 O HOH A 818 2.00 REMARK 500 O HOH A 706 O HOH A 779 2.03 REMARK 500 OH TYR A 483 O HOH A 701 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 219 99.97 119.48 REMARK 500 ASP A 262 -153.48 -144.93 REMARK 500 LYS A 448 -136.42 13.49 REMARK 500 ALA A 523 79.65 -61.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 218 LEU A 219 -144.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 854 DISTANCE = 5.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 401 OD2 REMARK 620 2 ASP A 454 OD2 89.2 REMARK 620 3 ASP A 455 OD1 89.8 87.8 REMARK 620 4 ASP A 455 OD2 139.9 90.1 50.1 REMARK 620 5 HOH A 752 O 76.3 87.1 165.2 143.7 REMARK 620 6 HOH A 810 O 95.2 173.3 97.3 89.7 89.0 REMARK 620 7 HOH A 719 O 155.5 84.4 113.5 64.0 79.7 89.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 499 O REMARK 620 2 HOH A 763 O 80.9 REMARK 620 3 HOH A 831 O 91.4 89.0 REMARK 620 4 HOH A 714 O 65.1 146.0 92.7 REMARK 620 5 LYS A 499 O 0.0 80.9 91.4 65.1 REMARK 620 6 HOH A 763 O 148.8 68.0 86.6 146.0 148.8 REMARK 620 7 HOH A 831 O 90.8 86.6 174.7 92.7 90.8 89.0 REMARK 620 8 HOH A 714 O 65.1 146.1 92.7 0.0 65.1 146.0 92.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 534 OD1 REMARK 620 2 ASN A 534 OD1 0.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 603 DBREF 5UKH A 201 552 UNP T1ZG69 T1ZG69_STRIT 201 552 SEQADV 5UKH MSE A 188 UNP T1ZG69 INITIATING METHIONINE SEQADV 5UKH GLY A 189 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH SER A 190 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH SER A 191 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH HIS A 192 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH HIS A 193 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH HIS A 194 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH HIS A 195 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH HIS A 196 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH HIS A 197 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH SER A 198 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH GLN A 199 UNP T1ZG69 EXPRESSION TAG SEQADV 5UKH ASP A 200 UNP T1ZG69 EXPRESSION TAG SEQRES 1 A 365 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 365 PRO SER ASP LEU SER TRP SER LYS ARG LEU SER ALA TYR SEQRES 3 A 365 ALA ALA LEU LYS ASP LEU THR LEU SER LYS GLN ASP LYS SEQRES 4 A 365 VAL PHE LEU GLU HIS LEU MSE THR GLU TYR GLY PHE ASP SEQRES 5 A 365 SER THR THR ALA ARG GLN ILE LEU LYS LEU LYS GLN GLY SEQRES 6 A 365 LEU GLU ARG LYS PHE SER SER ILE PHE ASP ASP TYR THR SEQRES 7 A 365 GLN GLU GLU ARG ASP TYR LEU LEU PHE ARG ILE ILE GLY SEQRES 8 A 365 SER VAL SER TYR ASN GLY VAL LYS TRP ASP GLU THR ALA SEQRES 9 A 365 GLY TYR LEU SER ARG TYR PHE TYR LYS GLU VAL VAL SER SEQRES 10 A 365 ASN PRO VAL THR GLY GLU LYS GLN LYS VAL PRO LYS SER SEQRES 11 A 365 LEU LEU ASP ILE PHE GLN GLU LEU GLY LEU SER LYS ALA SEQRES 12 A 365 GLU ALA LYS GLN LEU GLN TYR ASN LEU SER LEU GLN HIS SEQRES 13 A 365 GLU MSE ALA GLY GLY THR LEU SER THR THR GLY ASP MSE SEQRES 14 A 365 VAL LYS GLN ASP PRO ASP TYR TYR GLU THR ALA LYS ASN SEQRES 15 A 365 SER TYR LYS LEU VAL TYR GLY THR THR GLU GLY PHE ASP SEQRES 16 A 365 LYS PHE TRP ASP GLU ARG LEU LYS ALA TYR SER ASN ASP SEQRES 17 A 365 GLY ARG GLY ASN ALA ASP PHE THR HIS GLN SER ILE THR SEQRES 18 A 365 MSE ALA THR HIS LEU ASN PRO THR SER VAL GLN LEU SER SEQRES 19 A 365 ASP ILE TYR GLY GLY ARG LYS HIS VAL LYS ASN LEU ALA SEQRES 20 A 365 GLY TRP GLU GLY ASP THR THR TYR ASN ALA ASN GLU ARG SEQRES 21 A 365 LYS PRO SER ILE GLY GLU ASP ASP TYR LYS ALA ASP LEU SEQRES 22 A 365 ASP SER VAL ASN ILE ILE GLY ARG MSE LYS LYS GLY GLN SEQRES 23 A 365 SER TYR GLN SER ALA MSE SER SER TYR TYR SER ASP VAL SEQRES 24 A 365 GLN LYS GLY HIS SER VAL ARG GLU LYS GLU PHE LEU LYS SEQRES 25 A 365 ASN LYS ASP TRP GLU LYS VAL LYS LYS THR ILE TYR ASP SEQRES 26 A 365 SER LEU VAL PRO ASN GLY ILE ASN LYS ASN ALA ASP SER SEQRES 27 A 365 VAL VAL LYS ASP TYR ILE ALA LYS ASN TYR PRO ASP VAL SEQRES 28 A 365 SER LYS PHE LEU SER ARG LEU GLU SER VAL ALA GLY GLY SEQRES 29 A 365 GLN MODRES 5UKH MSE A 233 MET MODIFIED RESIDUE MODRES 5UKH MSE A 345 MET MODIFIED RESIDUE MODRES 5UKH MSE A 356 MET MODIFIED RESIDUE MODRES 5UKH MSE A 409 MET MODIFIED RESIDUE MODRES 5UKH MSE A 469 MET MODIFIED RESIDUE MODRES 5UKH MSE A 479 MET MODIFIED RESIDUE HET MSE A 233 8 HET MSE A 345 8 HET MSE A 356 8 HET MSE A 409 8 HET MSE A 469 8 HET MSE A 479 8 HET CA A 601 1 HET CA A 602 1 HET CA A 603 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 CA 3(CA 2+) FORMUL 5 HOH *154(H2 O) HELIX 1 AA1 TYR A 213 LYS A 217 5 5 HELIX 2 AA2 SER A 222 GLY A 237 1 16 HELIX 3 AA3 ASP A 239 PHE A 257 1 19 HELIX 4 AA4 THR A 265 VAL A 280 1 16 HELIX 5 AA5 GLY A 284 GLY A 292 1 9 HELIX 6 AA6 TYR A 293 TYR A 297 5 5 HELIX 7 AA7 SER A 317 LEU A 325 1 9 HELIX 8 AA8 SER A 328 ALA A 346 1 19 HELIX 9 AA9 THR A 352 ASP A 360 1 9 HELIX 10 AB1 ASP A 360 GLY A 376 1 17 HELIX 11 AB2 GLY A 380 ASN A 394 1 15 HELIX 12 AB3 ASP A 401 ASN A 414 1 14 HELIX 13 AB4 TRP A 436 THR A 440 1 5 HELIX 14 AB5 GLY A 452 LYS A 471 1 20 HELIX 15 AB6 SER A 474 GLY A 489 1 16 HELIX 16 AB7 SER A 491 LYS A 501 1 11 HELIX 17 AB8 ASP A 502 VAL A 515 1 14 HELIX 18 AB9 ALA A 523 TYR A 535 1 13 HELIX 19 AC1 TYR A 535 GLY A 550 1 16 SHEET 1 AA1 2 TYR A 299 VAL A 303 0 SHEET 2 AA1 2 LYS A 311 PRO A 315 -1 O VAL A 314 N LYS A 300 LINK C LEU A 232 N MSE A 233 1555 1555 1.32 LINK C MSE A 233 N THR A 234 1555 1555 1.35 LINK C GLU A 344 N MSE A 345 1555 1555 1.33 LINK C MSE A 345 N ALA A 346 1555 1555 1.34 LINK C ASP A 355 N MSE A 356 1555 1555 1.33 LINK C MSE A 356 N VAL A 357 1555 1555 1.34 LINK OD2 ASP A 401 CA CA A 601 1555 1555 2.30 LINK C THR A 408 N MSE A 409 1555 1555 1.33 LINK C MSE A 409 N ALA A 410 1555 1555 1.33 LINK OD2 ASP A 454 CA CA A 601 1555 1555 2.57 LINK OD1 ASP A 455 CA CA A 601 1555 1555 2.41 LINK OD2 ASP A 455 CA CA A 601 1555 1555 2.76 LINK C ARG A 468 N MSE A 469 1555 1555 1.33 LINK C MSE A 469 N LYS A 470 1555 1555 1.34 LINK C ALA A 478 N MSE A 479 1555 1555 1.33 LINK C MSE A 479 N SER A 480 1555 1555 1.34 LINK O LYS A 499 CA CA A 602 1555 1555 2.44 LINK OD1 ASN A 534 CA CA A 603 1555 1555 2.62 LINK CA CA A 601 O HOH A 752 1555 1555 2.56 LINK CA CA A 601 O HOH A 810 1555 1555 2.81 LINK CA CA A 601 O HOH A 719 1555 1555 1.88 LINK CA CA A 602 O HOH A 763 1555 1555 2.43 LINK CA CA A 602 O HOH A 831 1555 1555 2.36 LINK CA CA A 602 O HOH A 714 1555 1555 2.19 LINK O LYS A 499 CA CA A 602 1555 4567 2.44 LINK OD1 ASN A 534 CA CA A 603 1555 3556 2.62 LINK CA CA A 602 O HOH A 763 1555 4567 2.43 LINK CA CA A 602 O HOH A 831 1555 4567 2.36 LINK CA CA A 602 O HOH A 714 1555 4567 2.19 CISPEP 1 LEU A 219 THR A 220 0 29.85 SITE 1 AC1 6 ASP A 401 ASP A 454 ASP A 455 HOH A 719 SITE 2 AC1 6 HOH A 752 HOH A 810 SITE 1 AC2 4 LYS A 499 HOH A 714 HOH A 763 HOH A 831 SITE 1 AC3 1 ASN A 534 CRYST1 127.383 132.689 58.258 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007850 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007536 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017165 0.00000