HEADER OXIDOREDUCTASE 30-JAN-17 5UNI TITLE CRITICAL ROLE OF WATER MOLECULES FOR PROTON TRANSLOCATION OF THE TITLE 2 MEMBRANE-BOUND TRANSHYDROGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD(P) TRANSHYDROGENASE SUBUNIT ALPHA 2; COMPND 3 CHAIN: A; COMPND 4 EC: 1.6.1.2; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NAD(P) TRANSHYDROGENASE SUBUNIT BETA; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT BETA, COMPND 10 TRANHYDROGENASE CHAIN B; COMPND 11 EC: 1.6.1.2; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 GENE: TT_C1779; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 9 ORGANISM_TAXID: 274; SOURCE 10 GENE: TT_C1778; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSMEMBRANE, PROTON CHANNEL, HIGH RESOLUTION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.S.PADAYATTI,J.H.LEUNG REVDAT 6 06-MAR-24 5UNI 1 REMARK REVDAT 5 01-JAN-20 5UNI 1 REMARK REVDAT 4 13-SEP-17 5UNI 1 REMARK REVDAT 3 19-JUL-17 5UNI 1 JRNL REVDAT 2 12-JUL-17 5UNI 1 JRNL REVDAT 1 10-MAY-17 5UNI 0 JRNL AUTH P.S.PADAYATTI,J.H.LEUNG,P.MAHINTHICHAICHAN,E.TAJKHORSHID, JRNL AUTH 2 A.ISHCHENKO,V.CHEREZOV,S.M.SOLTIS,J.B.JACKSON,C.D.STOUT, JRNL AUTH 3 R.B.GENNIS,Q.ZHANG JRNL TITL CRITICAL ROLE OF WATER MOLECULES IN PROTON TRANSLOCATION BY JRNL TITL 2 THE MEMBRANE-BOUND TRANSHYDROGENASE. JRNL REF STRUCTURE V. 25 1111 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 28648609 JRNL DOI 10.1016/J.STR.2017.05.022 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 23658 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1311 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1747 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2607 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 159 REMARK 3 SOLVENT ATOMS : 49 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.203 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.176 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.115 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2828 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2920 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3796 ; 1.958 ; 2.001 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6659 ; 1.076 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 355 ; 5.711 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;32.893 ;22.267 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 417 ;13.746 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;15.215 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 447 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3042 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 647 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1423 ; 3.935 ; 4.069 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1422 ; 3.930 ; 4.067 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1777 ; 5.695 ; 6.076 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1778 ; 5.696 ; 6.078 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1405 ; 5.626 ; 5.102 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1406 ; 5.624 ; 5.103 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2020 ; 8.197 ; 7.305 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3172 ;13.417 ;35.501 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3168 ;13.425 ;35.310 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5UNI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000226164. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 6.5-6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24963 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 43.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THIN NEEDLES OF 10 X 3 X 1 UM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 60 MG/ML PROTEIN / 1-(8Z REMARK 280 -PENTADECENOYL)-RAC-GLYCEROL (MIXED USING A MECHANICAL SYRINGE REMARK 280 MIXER) IN MAG 8.7 AND PRECIPITANT (30% PEG400, 0.1 M MES, PH 6.5, REMARK 280 0.1-0.4 M MAGNESIUM NITRATE, 1.0-2.5% BENZAMIDINE HYDROCHLORIDE) REMARK 280 , LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.66900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.66900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.42900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.46800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.42900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.46800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.66900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.42900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.46800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.66900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.42900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 54.46800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -186.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 54.66900 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL B 262 REMARK 465 GLY B 263 REMARK 465 GLY B 264 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 57 CG CD OE1 OE2 REMARK 470 GLU B 110 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 415 O HOH B 415 4575 1.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 89 1.00 -54.63 REMARK 500 ARG A 92 -100.60 -101.15 REMARK 500 LYS A 93 100.18 177.26 REMARK 500 ASP B 175 44.59 -105.77 REMARK 500 ASN B 253 78.09 63.09 REMARK 500 ARG B 254 175.53 174.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 438 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH B 439 DISTANCE = 7.26 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 101 REMARK 610 1PE A 102 REMARK 610 OLC B 301 REMARK 610 OLC B 302 REMARK 610 1PE B 303 REMARK 610 1PE B 304 REMARK 610 PEG B 309 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEN B 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEN B 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEN B 312 DBREF 5UNI A 1 94 UNP Q72GR9 Q72GR9_THET2 1 94 DBREF 5UNI B 1 264 UNP Q72GS0 Q72GS0_THET2 1 263 SEQADV 5UNI CYS A 16 UNP Q72GR9 ALA 16 CONFLICT SEQADV 5UNI ILE B 258 UNP Q72GS0 INSERTION SEQRES 1 A 94 MET GLU PHE GLY PHE TRP SER ALA LEU TYR ILE PHE VAL SEQRES 2 A 94 LEU THR CYS PHE LEU GLY TYR GLU LEU ILE THR ARG VAL SEQRES 3 A 94 PRO VAL ILE LEU HIS THR PRO LEU MET SER GLY SER ASN SEQRES 4 A 94 PHE ILE HIS GLY VAL VAL VAL VAL GLY ALA MET VAL VAL SEQRES 5 A 94 LEU GLY HIS ALA GLU THR GLY LEU GLU LYS LEU ILE GLY SEQRES 6 A 94 PHE LEU GLY VAL ILE LEU GLY ALA ALA ASN ALA ALA GLY SEQRES 7 A 94 GLY TYR ALA VAL THR VAL ARG MET LEU GLU MET PHE GLU SEQRES 8 A 94 ARG LYS PRO SEQRES 1 B 264 MET ASP LEU ILE GLN ALA ALA TYR PHE VAL VAL ALA ILE SEQRES 2 B 264 LEU PHE ILE VAL GLY LEU LYS ARG MET ALA HIS PRO THR SEQRES 3 B 264 THR ALA LYS SER GLY ILE VAL TRP ALA GLY TRP GLY MET SEQRES 4 B 264 VAL LEU ALA VAL LEU ALA THR PHE PHE TRP PRO GLY MET SEQRES 5 B 264 GLY ASN PHE ALA LEU ILE LEU LEU ALA LEU LEU LEU GLY SEQRES 6 B 264 SER VAL VAL ALA TRP TRP ALA ALA VAL ARG VAL ALA MET SEQRES 7 B 264 THR ASP MET PRO GLN MET VAL ALA ILE TYR ASN GLY MET SEQRES 8 B 264 GLY GLY GLY ALA ALA ALA THR ILE ALA ALA VAL GLU LEU SEQRES 9 B 264 LEU LYS GLY ALA PHE GLU ASN THR GLY LEU MET ALA LEU SEQRES 10 B 264 ALA ILE LEU GLY GLY LEU ILE GLY SER VAL ALA PHE THR SEQRES 11 B 264 GLY SER LEU ILE ALA PHE ALA LYS LEU GLN GLY ILE MET SEQRES 12 B 264 LYS SER ARG PRO ILE LEU PHE PRO GLY GLN LYS ALA VAL SEQRES 13 B 264 ASN ALA LEU VAL LEU ALA LEU THR VAL VAL ILE GLY LEU SEQRES 14 B 264 SER LEU LEU TRP ASN ASP ALA THR ALA SER ILE VAL LEU SEQRES 15 B 264 PHE PHE LEU LEU ALA LEU LEU PHE GLY VAL LEU MET THR SEQRES 16 B 264 LEU PRO ILE GLY GLY GLY ASP MET PRO VAL ALA ILE SER SEQRES 17 B 264 PHE TYR ASN ALA PHE THR GLY MET ALA VAL GLY PHE GLU SEQRES 18 B 264 GLY PHE ALA VAL GLY ASN PRO ALA LEU MET VAL ALA GLY SEQRES 19 B 264 THR LEU VAL GLY ALA ALA GLY THR LEU LEU THR VAL LEU SEQRES 20 B 264 MET ALA ARG ALA MET ASN ARG SER VAL TRP ILE SER VAL SEQRES 21 B 264 LEU VAL GLY GLY HET 1PE A 101 10 HET 1PE A 102 10 HET PEG A 103 7 HET PEG A 104 7 HET OLC B 301 23 HET OLC B 302 23 HET 1PE B 303 10 HET 1PE B 304 10 HET PEG B 305 7 HET PEG B 306 7 HET PEG B 307 7 HET PEG B 308 7 HET PEG B 309 4 HET BEN B 310 9 HET BEN B 311 9 HET BEN B 312 9 HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM BEN BENZAMIDINE HETSYN 1PE PEG400 HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 3 1PE 4(C10 H22 O6) FORMUL 5 PEG 7(C4 H10 O3) FORMUL 7 OLC 2(C21 H40 O4) FORMUL 16 BEN 3(C7 H8 N2) FORMUL 19 HOH *49(H2 O) HELIX 1 AA1 GLY A 4 ILE A 23 1 20 HELIX 2 AA2 PRO A 27 ILE A 29 5 3 HELIX 3 AA3 LEU A 30 GLY A 43 1 14 HELIX 4 AA4 VAL A 44 ALA A 56 1 13 HELIX 5 AA5 THR A 58 LEU A 87 1 30 HELIX 6 AA6 GLU A 88 PHE A 90 5 3 HELIX 7 AA7 ASP B 2 ALA B 23 1 22 HELIX 8 AA8 HIS B 24 THR B 26 5 3 HELIX 9 AA9 THR B 27 PHE B 47 1 21 HELIX 10 AB1 ASN B 54 VAL B 76 1 23 HELIX 11 AB2 ALA B 77 THR B 79 5 3 HELIX 12 AB3 ASP B 80 LYS B 106 1 27 HELIX 13 AB4 ASN B 111 GLY B 141 1 31 HELIX 14 AB5 GLY B 152 LEU B 171 1 20 HELIX 15 AB6 ALA B 176 LEU B 196 1 21 HELIX 16 AB7 ASP B 202 GLY B 226 1 25 HELIX 17 AB8 ASN B 227 MET B 252 1 26 HELIX 18 AB9 SER B 255 LEU B 261 1 7 SITE 1 AC1 1 GLY B 36 SITE 1 AC2 6 GLU A 2 PHE A 3 ALA A 8 PHE A 12 SITE 2 AC2 6 LEU B 114 PHE B 223 SITE 1 AC3 4 CYS A 16 TYR A 20 PEG A 104 LYS B 20 SITE 1 AC4 3 PHE A 12 CYS A 16 PEG A 103 SITE 1 AC5 8 MET B 1 LEU B 3 ILE B 4 TRP B 34 SITE 2 AC5 8 LEU B 41 ALA B 45 PHE B 48 PEG B 307 SITE 1 AC6 4 PHE B 48 LEU B 185 LEU B 189 BEN B 311 SITE 1 AC7 1 LEU B 44 SITE 1 AC8 2 MET B 84 MET B 91 SITE 1 AC9 1 TRP B 37 SITE 1 AD1 2 ASN B 111 GLY B 113 SITE 1 AD2 1 OLC B 301 SITE 1 AD3 1 LEU B 169 SITE 1 AD4 1 ALA B 97 SITE 1 AD5 5 GLU A 2 GLU B 103 ALA B 108 ALA B 224 SITE 2 AD5 5 VAL B 225 SITE 1 AD6 3 PHE B 55 PHE B 150 OLC B 302 SITE 1 AD7 6 GLN B 153 LYS B 154 ILE B 258 SER B 259 SITE 2 AD7 6 VAL B 260 LEU B 261 CRYST1 84.858 108.936 109.338 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011784 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009180 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009146 0.00000