HEADER TRANSFERASE/TRANSFERASE INHIBITOR 01-FEB-17 5UOX
TITLE STRUCTURE-BASED DESIGN OF ASK1 INHIBITORS AS POTENTIAL FIRST-IN-CLASS
TITLE 2 AGENTS FOR HEART FAILURE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5;
COMPND 3 CHAIN: A, B;
COMPND 4 FRAGMENT: UNP RESIDUES 670-940;
COMPND 5 SYNONYM: APOPTOSIS SIGNAL-REGULATING KINASE 1,ASK-1,MAPK/ERK KINASE
COMPND 6 KINASE 5,MEKK 5;
COMPND 7 EC: 2.7.11.25;
COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: MAP3K5, ASK1, MAPKKK5, MEKK5;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3) PLYSS;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEH8
KEYWDS TRANSFERASE, METAL-BINDING, APOPTOSIS, TRANSFERASE-TRANSFERASE
KEYWDS 2 INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR D.R.DOUGAN
REVDAT 3 06-MAR-24 5UOX 1 REMARK
REVDAT 2 27-SEP-17 5UOX 1 REMARK
REVDAT 1 07-JUN-17 5UOX 0
JRNL AUTH M.LANIER,J.PICKENS,S.V.BIGI,E.L.BRADSHAW-PIERCE,A.CHAMBERS,
JRNL AUTH 2 Z.S.CHERUVALLATH,D.COLE,D.R.DOUGAN,J.ERMOLIEFF,T.GIBSON,
JRNL AUTH 3 P.HALKOWYCZ,A.HIROKAWA,A.IVETAC,J.MIURA,E.NUNEZ,M.SABAT,
JRNL AUTH 4 J.TYHONAS,H.WANG,X.WANG,S.SWANN
JRNL TITL STRUCTURE-BASED DESIGN OF ASK1 INHIBITORS AS POTENTIAL
JRNL TITL 2 AGENTS FOR HEART FAILURE.
JRNL REF ACS MED CHEM LETT V. 8 316 2017
JRNL REFN ISSN 1948-5875
JRNL PMID 28337323
JRNL DOI 10.1021/ACSMEDCHEMLETT.6B00481
REMARK 2
REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.7.0025
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 3 NUMBER OF REFLECTIONS : 27373
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.229
REMARK 3 R VALUE (WORKING SET) : 0.228
REMARK 3 FREE R VALUE : 0.253
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100
REMARK 3 FREE R VALUE TEST SET COUNT : 1468
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1953
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.76
REMARK 3 BIN R VALUE (WORKING SET) : 0.3430
REMARK 3 BIN FREE R VALUE SET COUNT : 104
REMARK 3 BIN FREE R VALUE : 0.4560
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 4097
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 58
REMARK 3 SOLVENT ATOMS : 70
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.27
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 2.15000
REMARK 3 B22 (A**2) : 2.15000
REMARK 3 B33 (A**2) : -3.23000
REMARK 3 B12 (A**2) : 1.08000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.369
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.253
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.210
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.145
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4251 ; 0.008 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5735 ; 1.152 ; 1.990
REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 509 ; 5.354 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 191 ;39.036 ;24.607
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 755 ;14.774 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;20.890 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 610 ; 0.078 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3202 ; 0.005 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 9
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 671 A 704
REMARK 3 ORIGIN FOR THE GROUP (A): -7.5391 1.4220 21.3235
REMARK 3 T TENSOR
REMARK 3 T11: 0.3842 T22: 0.1388
REMARK 3 T33: 0.3535 T12: -0.1530
REMARK 3 T13: -0.0268 T23: 0.0371
REMARK 3 L TENSOR
REMARK 3 L11: 3.5090 L22: 0.3013
REMARK 3 L33: 4.7789 L12: -0.9148
REMARK 3 L13: 1.0145 L23: 0.0873
REMARK 3 S TENSOR
REMARK 3 S11: 0.1392 S12: -0.0321 S13: -0.0543
REMARK 3 S21: -0.1083 S22: 0.0422 S23: 0.0943
REMARK 3 S31: 0.0172 S32: 0.0058 S33: -0.1814
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 705 A 768
REMARK 3 ORIGIN FOR THE GROUP (A): 3.5139 3.6972 18.2112
REMARK 3 T TENSOR
REMARK 3 T11: 0.2415 T22: 0.3242
REMARK 3 T33: 0.2743 T12: -0.1598
REMARK 3 T13: 0.0541 T23: -0.0126
REMARK 3 L TENSOR
REMARK 3 L11: 1.9572 L22: 2.7326
REMARK 3 L33: 8.4856 L12: 0.8522
REMARK 3 L13: 1.4978 L23: 3.3573
REMARK 3 S TENSOR
REMARK 3 S11: -0.1241 S12: 0.4523 S13: -0.1225
REMARK 3 S21: -0.2645 S22: 0.3528 S23: -0.0974
REMARK 3 S31: -0.0831 S32: 1.0977 S33: -0.2287
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 769 A 796
REMARK 3 ORIGIN FOR THE GROUP (A): 13.3285 12.1344 36.4646
REMARK 3 T TENSOR
REMARK 3 T11: 0.2088 T22: 0.4996
REMARK 3 T33: 0.3010 T12: -0.2051
REMARK 3 T13: 0.0043 T23: -0.0008
REMARK 3 L TENSOR
REMARK 3 L11: 2.9901 L22: 3.4638
REMARK 3 L33: 10.8645 L12: 1.1856
REMARK 3 L13: 0.0531 L23: 2.5723
REMARK 3 S TENSOR
REMARK 3 S11: -0.1747 S12: 0.2055 S13: -0.1008
REMARK 3 S21: 0.3574 S22: 0.3203 S23: -0.3308
REMARK 3 S31: -0.1264 S32: 1.7196 S33: -0.1456
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 797 A 820
REMARK 3 ORIGIN FOR THE GROUP (A): 10.1859 8.9560 27.8508
REMARK 3 T TENSOR
REMARK 3 T11: 0.2054 T22: 0.4794
REMARK 3 T33: 0.2355 T12: -0.1981
REMARK 3 T13: 0.0522 T23: -0.0687
REMARK 3 L TENSOR
REMARK 3 L11: 1.9752 L22: 2.3785
REMARK 3 L33: 10.4631 L12: 2.1185
REMARK 3 L13: 0.1723 L23: -0.6732
REMARK 3 S TENSOR
REMARK 3 S11: -0.0941 S12: 0.2893 S13: -0.2735
REMARK 3 S21: -0.0885 S22: 0.2053 S23: -0.2684
REMARK 3 S31: -0.2215 S32: 1.7715 S33: -0.1112
REMARK 3
REMARK 3 TLS GROUP : 5
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 821 A 876
REMARK 3 ORIGIN FOR THE GROUP (A): 16.0951 18.8072 21.4035
REMARK 3 T TENSOR
REMARK 3 T11: 0.8667 T22: 1.0224
REMARK 3 T33: 0.4967 T12: -0.7233
REMARK 3 T13: 0.2024 T23: -0.1121
REMARK 3 L TENSOR
REMARK 3 L11: 0.1441 L22: 5.0891
REMARK 3 L33: 9.7743 L12: -0.2540
REMARK 3 L13: 0.4174 L23: 2.4142
REMARK 3 S TENSOR
REMARK 3 S11: -0.2549 S12: 0.1772 S13: -0.1250
REMARK 3 S21: -1.0471 S22: 0.5190 S23: -0.4172
REMARK 3 S31: -1.9782 S32: 2.6960 S33: -0.2641
REMARK 3
REMARK 3 TLS GROUP : 6
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 877 A 939
REMARK 3 ORIGIN FOR THE GROUP (A): 18.6351 24.9307 31.8573
REMARK 3 T TENSOR
REMARK 3 T11: 0.7528 T22: 0.7893
REMARK 3 T33: 0.4172 T12: -0.7694
REMARK 3 T13: 0.0063 T23: -0.0357
REMARK 3 L TENSOR
REMARK 3 L11: 0.8239 L22: 6.4621
REMARK 3 L33: 12.2802 L12: 0.9068
REMARK 3 L13: 0.0427 L23: 1.0776
REMARK 3 S TENSOR
REMARK 3 S11: -0.1946 S12: 0.1812 S13: 0.0670
REMARK 3 S21: -0.5754 S22: 0.5243 S23: -0.1074
REMARK 3 S31: -2.2975 S32: 2.3851 S33: -0.3296
REMARK 3
REMARK 3 TLS GROUP : 7
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 670 B 704
REMARK 3 ORIGIN FOR THE GROUP (A): 53.0469 4.5989 13.8335
REMARK 3 T TENSOR
REMARK 3 T11: 0.2668 T22: 0.1462
REMARK 3 T33: 0.1609 T12: -0.0497
REMARK 3 T13: 0.0194 T23: 0.0133
REMARK 3 L TENSOR
REMARK 3 L11: 3.9904 L22: 2.0028
REMARK 3 L33: 4.8214 L12: -0.0685
REMARK 3 L13: 0.6221 L23: -0.5757
REMARK 3 S TENSOR
REMARK 3 S11: 0.2692 S12: -0.0895 S13: 0.1294
REMARK 3 S21: 0.4810 S22: -0.1634 S23: 0.0366
REMARK 3 S31: -0.1376 S32: -0.6150 S33: -0.1059
REMARK 3
REMARK 3 TLS GROUP : 8
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 705 B 755
REMARK 3 ORIGIN FOR THE GROUP (A): 43.8293 13.2213 15.6952
REMARK 3 T TENSOR
REMARK 3 T11: 0.4227 T22: 0.4831
REMARK 3 T33: 0.3279 T12: 0.1168
REMARK 3 T13: 0.1244 T23: 0.0081
REMARK 3 L TENSOR
REMARK 3 L11: 2.9128 L22: 2.3692
REMARK 3 L33: 6.5971 L12: -0.7134
REMARK 3 L13: 1.1168 L23: -0.4653
REMARK 3 S TENSOR
REMARK 3 S11: 0.0625 S12: -0.1834 S13: 0.2878
REMARK 3 S21: 0.5102 S22: -0.0709 S23: 0.2826
REMARK 3 S31: -0.8973 S32: -1.2179 S33: 0.0085
REMARK 3
REMARK 3 TLS GROUP : 9
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 756 B 939
REMARK 3 ORIGIN FOR THE GROUP (A): 43.4549 22.9497 -6.3587
REMARK 3 T TENSOR
REMARK 3 T11: 0.7832 T22: 0.3985
REMARK 3 T33: 0.3284 T12: 0.5272
REMARK 3 T13: 0.0666 T23: 0.0765
REMARK 3 L TENSOR
REMARK 3 L11: 1.1139 L22: 3.4364
REMARK 3 L33: 6.9665 L12: 0.1246
REMARK 3 L13: -0.8395 L23: 0.7668
REMARK 3 S TENSOR
REMARK 3 S11: 0.4378 S12: 0.1597 S13: 0.2812
REMARK 3 S21: -0.6087 S22: -0.3547 S23: 0.2793
REMARK 3 S31: -1.9171 S32: -1.2918 S33: -0.0831
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED
REMARK 4
REMARK 4 5UOX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-FEB-17.
REMARK 100 THE DEPOSITION ID IS D_1000226222.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 28-JUN-14
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 24-ID-C
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200 DATA SCALING SOFTWARE : HKL-2000, SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28981
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 10.40
REMARK 200 R MERGE (I) : 0.08200
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.4000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 9.90
REMARK 200 R MERGE FOR SHELL (I) : 0.66500
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 61.16
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 6% POLYETHYLENE GLYCOL 2000 MME ,0.05M
REMARK 280 AMMONIUM SULPHATE, 0.1M MES, PH 6.0, VAPOR DIFFUSION, SITTING
REMARK 280 DROP, TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+1/6
REMARK 290 6555 X-Y,X,Z+5/6
REMARK 290 7555 Y,X,-Z+2/3
REMARK 290 8555 X-Y,-Y,-Z
REMARK 290 9555 -X,-X+Y,-Z+1/3
REMARK 290 10555 -Y,-X,-Z+1/6
REMARK 290 11555 -X+Y,Y,-Z+1/2
REMARK 290 12555 X,X-Y,-Z+5/6
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 289.35200
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 144.67600
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 217.01400
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 72.33800
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 361.69000
REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 289.35200
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 144.67600
REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 72.33800
REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 217.01400
REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 361.69000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 ALA A 830
REMARK 465 GLY A 831
REMARK 465 ILE A 832
REMARK 465 ASN A 833
REMARK 465 PRO A 834
REMARK 465 CYS A 835
REMARK 465 THR A 836
REMARK 465 GLU A 837
REMARK 465 ASP B 715
REMARK 465 SER B 716
REMARK 465 ARG B 717
REMARK 465 TYR B 718
REMARK 465 ALA B 830
REMARK 465 GLY B 831
REMARK 465 ILE B 832
REMARK 465 ASN B 833
REMARK 465 PRO B 834
REMARK 465 CYS B 835
REMARK 465 THR B 836
REMARK 465 GLU B 837
REMARK 465 ASP B 852
REMARK 465 LYS B 853
REMARK 465 GLY B 854
REMARK 465 PRO B 855
REMARK 465 ARG B 856
REMARK 465 GLY B 857
REMARK 465 VAL B 940
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 LYS A 898 C LYS A 898 O 0.185
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASN A 747 37.07 39.74
REMARK 500 LYS A 769 -49.35 -130.33
REMARK 500 ASP A 803 38.41 -153.99
REMARK 500 ASP A 822 92.72 55.09
REMARK 500 ARG B 802 -0.50 80.04
REMARK 500 ASP B 803 42.11 -145.72
REMARK 500 ASP B 822 94.50 57.73
REMARK 500 PHE B 839 146.62 173.40
REMARK 500 GLU B 849 2.72 -65.14
REMARK 500 ILE B 850 70.47 -101.62
REMARK 500 GLU B 883 -7.48 -50.69
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 8GY A 1000
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 8GY B 1000
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5UOR RELATED DB: PDB
REMARK 900 RELATED ID: 5UP3 RELATED DB: PDB
DBREF 5UOX A 670 940 UNP Q99683 M3K5_HUMAN 670 940
DBREF 5UOX B 670 940 UNP Q99683 M3K5_HUMAN 670 940
SEQRES 1 A 271 LEU LEU GLU TYR ASP TYR GLU TYR ASP GLU ASN GLY ASP
SEQRES 2 A 271 ARG VAL VAL LEU GLY LYS GLY THR TYR GLY ILE VAL TYR
SEQRES 3 A 271 ALA GLY ARG ASP LEU SER ASN GLN VAL ARG ILE ALA ILE
SEQRES 4 A 271 LYS GLU ILE PRO GLU ARG ASP SER ARG TYR SER GLN PRO
SEQRES 5 A 271 LEU HIS GLU GLU ILE ALA LEU HIS LYS HIS LEU LYS HIS
SEQRES 6 A 271 LYS ASN ILE VAL GLN TYR LEU GLY SER PHE SER GLU ASN
SEQRES 7 A 271 GLY PHE ILE LYS ILE PHE MET GLU GLN VAL PRO GLY GLY
SEQRES 8 A 271 SER LEU SER ALA LEU LEU ARG SER LYS TRP GLY PRO LEU
SEQRES 9 A 271 LYS ASP ASN GLU GLN THR ILE GLY PHE TYR THR LYS GLN
SEQRES 10 A 271 ILE LEU GLU GLY LEU LYS TYR LEU HIS ASP ASN GLN ILE
SEQRES 11 A 271 VAL HIS ARG ASP ILE LYS GLY ASP ASN VAL LEU ILE ASN
SEQRES 12 A 271 THR TYR SER GLY VAL LEU LYS ILE SER ASP PHE GLY THR
SEQRES 13 A 271 SER LYS ARG LEU ALA GLY ILE ASN PRO CYS THR GLU THR
SEQRES 14 A 271 PHE THR GLY THR LEU GLN TYR MET ALA PRO GLU ILE ILE
SEQRES 15 A 271 ASP LYS GLY PRO ARG GLY TYR GLY LYS ALA ALA ASP ILE
SEQRES 16 A 271 TRP SER LEU GLY CYS THR ILE ILE GLU MET ALA THR GLY
SEQRES 17 A 271 LYS PRO PRO PHE TYR GLU LEU GLY GLU PRO GLN ALA ALA
SEQRES 18 A 271 MET PHE LYS VAL GLY MET PHE LYS VAL HIS PRO GLU ILE
SEQRES 19 A 271 PRO GLU SER MET SER ALA GLU ALA LYS ALA PHE ILE LEU
SEQRES 20 A 271 LYS CYS PHE GLU PRO ASP PRO ASP LYS ARG ALA CYS ALA
SEQRES 21 A 271 ASN ASP LEU LEU VAL ASP GLU PHE LEU LYS VAL
SEQRES 1 B 271 LEU LEU GLU TYR ASP TYR GLU TYR ASP GLU ASN GLY ASP
SEQRES 2 B 271 ARG VAL VAL LEU GLY LYS GLY THR TYR GLY ILE VAL TYR
SEQRES 3 B 271 ALA GLY ARG ASP LEU SER ASN GLN VAL ARG ILE ALA ILE
SEQRES 4 B 271 LYS GLU ILE PRO GLU ARG ASP SER ARG TYR SER GLN PRO
SEQRES 5 B 271 LEU HIS GLU GLU ILE ALA LEU HIS LYS HIS LEU LYS HIS
SEQRES 6 B 271 LYS ASN ILE VAL GLN TYR LEU GLY SER PHE SER GLU ASN
SEQRES 7 B 271 GLY PHE ILE LYS ILE PHE MET GLU GLN VAL PRO GLY GLY
SEQRES 8 B 271 SER LEU SER ALA LEU LEU ARG SER LYS TRP GLY PRO LEU
SEQRES 9 B 271 LYS ASP ASN GLU GLN THR ILE GLY PHE TYR THR LYS GLN
SEQRES 10 B 271 ILE LEU GLU GLY LEU LYS TYR LEU HIS ASP ASN GLN ILE
SEQRES 11 B 271 VAL HIS ARG ASP ILE LYS GLY ASP ASN VAL LEU ILE ASN
SEQRES 12 B 271 THR TYR SER GLY VAL LEU LYS ILE SER ASP PHE GLY THR
SEQRES 13 B 271 SER LYS ARG LEU ALA GLY ILE ASN PRO CYS THR GLU THR
SEQRES 14 B 271 PHE THR GLY THR LEU GLN TYR MET ALA PRO GLU ILE ILE
SEQRES 15 B 271 ASP LYS GLY PRO ARG GLY TYR GLY LYS ALA ALA ASP ILE
SEQRES 16 B 271 TRP SER LEU GLY CYS THR ILE ILE GLU MET ALA THR GLY
SEQRES 17 B 271 LYS PRO PRO PHE TYR GLU LEU GLY GLU PRO GLN ALA ALA
SEQRES 18 B 271 MET PHE LYS VAL GLY MET PHE LYS VAL HIS PRO GLU ILE
SEQRES 19 B 271 PRO GLU SER MET SER ALA GLU ALA LYS ALA PHE ILE LEU
SEQRES 20 B 271 LYS CYS PHE GLU PRO ASP PRO ASP LYS ARG ALA CYS ALA
SEQRES 21 B 271 ASN ASP LEU LEU VAL ASP GLU PHE LEU LYS VAL
HET 8GY A1000 29
HET 8GY B1000 29
HETNAM 8GY 2-(6-{4-[(2R)-1-HYDROXYPROPAN-2-YL]-4H-1,2,4-TRIAZOL-3-
HETNAM 2 8GY YL}PYRIDIN-2-YL)-6-[(PROPAN-2-YL)OXY]-2,3-DIHYDRO-1H-
HETNAM 3 8GY ISOINDOL-1-ONE
FORMUL 3 8GY 2(C21 H23 N5 O3)
FORMUL 5 HOH *70(H2 O)
HELIX 1 AA1 TYR A 718 LYS A 730 1 13
HELIX 2 AA2 SER A 761 LYS A 769 1 9
HELIX 3 AA3 ASN A 776 ASN A 797 1 22
HELIX 4 AA4 LYS A 805 ASP A 807 5 3
HELIX 5 AA5 THR A 842 MET A 846 5 5
HELIX 6 AA6 ALA A 847 GLY A 854 1 8
HELIX 7 AA7 PRO A 855 TYR A 858 5 4
HELIX 8 AA8 GLY A 859 GLY A 877 1 19
HELIX 9 AA9 PHE A 881 GLY A 885 5 5
HELIX 10 AB1 GLU A 886 LYS A 898 1 13
HELIX 11 AB2 SER A 908 PHE A 919 1 12
HELIX 12 AB3 CYS A 928 ASP A 935 1 8
HELIX 13 AB4 GLU A 936 LYS A 939 5 4
HELIX 14 AB5 GLN B 720 LYS B 730 1 11
HELIX 15 AB6 SER B 761 LYS B 769 1 9
HELIX 16 AB7 ASN B 776 ASP B 796 1 21
HELIX 17 AB8 LYS B 805 ASP B 807 5 3
HELIX 18 AB9 THR B 842 MET B 846 5 5
HELIX 19 AC1 GLY B 859 GLY B 877 1 19
HELIX 20 AC2 PHE B 881 GLY B 885 5 5
HELIX 21 AC3 GLU B 886 LYS B 898 1 13
HELIX 22 AC4 SER B 908 PHE B 919 1 12
HELIX 23 AC5 CYS B 928 VAL B 934 1 7
HELIX 24 AC6 ASP B 935 LYS B 939 5 5
SHEET 1 AA1 3 TYR A 673 TYR A 675 0
SHEET 2 AA1 3 ILE A 693 ASP A 699 -1 O ARG A 698 N ASP A 674
SHEET 3 AA1 3 VAL A 685 LYS A 688 -1 N GLY A 687 O VAL A 694
SHEET 1 AA2 5 TYR A 673 TYR A 675 0
SHEET 2 AA2 5 ILE A 693 ASP A 699 -1 O ARG A 698 N ASP A 674
SHEET 3 AA2 5 ARG A 705 PRO A 712 -1 O ILE A 708 N TYR A 695
SHEET 4 AA2 5 PHE A 749 GLU A 755 -1 O MET A 754 N ALA A 707
SHEET 5 AA2 5 TYR A 740 GLU A 746 -1 N GLU A 746 O PHE A 749
SHEET 1 AA3 2 ILE A 799 VAL A 800 0
SHEET 2 AA3 2 LYS A 827 ARG A 828 -1 O LYS A 827 N VAL A 800
SHEET 1 AA4 2 VAL A 809 ILE A 811 0
SHEET 2 AA4 2 LEU A 818 ILE A 820 -1 O LYS A 819 N LEU A 810
SHEET 1 AA5 3 TYR B 673 TYR B 675 0
SHEET 2 AA5 3 GLY B 692 ASP B 699 -1 O ARG B 698 N ASP B 674
SHEET 3 AA5 3 VAL B 685 GLY B 689 -1 N GLY B 689 O GLY B 692
SHEET 1 AA6 5 TYR B 673 TYR B 675 0
SHEET 2 AA6 5 GLY B 692 ASP B 699 -1 O ARG B 698 N ASP B 674
SHEET 3 AA6 5 ARG B 705 PRO B 712 -1 O ILE B 708 N TYR B 695
SHEET 4 AA6 5 PHE B 749 GLU B 755 -1 O ILE B 752 N LYS B 709
SHEET 5 AA6 5 TYR B 740 GLU B 746 -1 N GLY B 742 O PHE B 753
SHEET 1 AA7 2 ILE B 799 VAL B 800 0
SHEET 2 AA7 2 LYS B 827 ARG B 828 -1 O LYS B 827 N VAL B 800
SHEET 1 AA8 2 VAL B 809 ILE B 811 0
SHEET 2 AA8 2 LEU B 818 ILE B 820 -1 O LYS B 819 N LEU B 810
SITE 1 AC1 18 LEU A 686 LYS A 688 GLY A 689 ALA A 707
SITE 2 AC1 18 LYS A 709 VAL A 738 MET A 754 GLU A 755
SITE 3 AC1 18 GLN A 756 VAL A 757 GLY A 759 GLY A 760
SITE 4 AC1 18 ASP A 807 ASN A 808 LEU A 810 SER A 821
SITE 5 AC1 18 ASP A 822 HOH A1124
SITE 1 AC2 16 LEU B 686 LYS B 688 GLY B 689 ALA B 707
SITE 2 AC2 16 LYS B 709 MET B 754 GLU B 755 GLN B 756
SITE 3 AC2 16 VAL B 757 GLY B 760 ASP B 807 ASN B 808
SITE 4 AC2 16 LEU B 810 TYR B 814 SER B 821 ASP B 822
CRYST1 78.544 78.544 434.028 90.00 90.00 120.00 P 65 2 2 24
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.012732 0.007351 0.000000 0.00000
SCALE2 0.000000 0.014701 0.000000 0.00000
SCALE3 0.000000 0.000000 0.002304 0.00000