HEADER TRANSFERASE 17-FEB-17 5UUO TITLE CRYSTAL STRUCTURE OF SARO_2595 FROM NOVOSPHINGOBIUM AROMATICIVORANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE-LIKE PROTEIN; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOVOSPHINGOBIUM AROMATICIVORANS (STRAIN ATCC SOURCE 3 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199); SOURCE 4 ORGANISM_TAXID: 279238; SOURCE 5 STRAIN: ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199; SOURCE 6 GENE: SARO_2595; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVP302K KEYWDS BIOENERGY, GLBRC, LIGNIN VALORIZATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.A.BINGMAN,W.S.KONTUR,C.N.OLMSTED,B.G.FOX,T.J.DONOHUE REVDAT 5 22-MAY-24 5UUO 1 REMARK REVDAT 4 16-MAR-22 5UUO 1 COMPND HETNAM REVDAT 3 18-APR-18 5UUO 1 COMPND JRNL HETNAM ATOM REVDAT 2 28-MAR-18 5UUO 1 JRNL REVDAT 1 28-FEB-18 5UUO 0 JRNL AUTH W.S.KONTUR,C.A.BINGMAN,C.N.OLMSTED,D.R.WASSARMAN,A.ULBRICH, JRNL AUTH 2 D.L.GALL,R.W.SMITH,L.M.YUSKO,B.G.FOX,D.R.NOGUERA,J.J.COON, JRNL AUTH 3 T.J.DONOHUE JRNL TITL NOVOSPHINGOBIUM AROMATICIVORANSUSES A NU-CLASS JRNL TITL 2 GLUTATHIONES-TRANSFERASE AS A GLUTATHIONE LYASE IN BREAKING JRNL TITL 3 THE BETA-ARYL ETHER BOND OF LIGNIN. JRNL REF J. BIOL. CHEM. V. 293 4955 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29449375 JRNL DOI 10.1074/JBC.RA117.001268 REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 225263 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.130 REMARK 3 FREE R VALUE : 0.132 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 0.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1963 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8186 - 3.0117 1.00 16629 153 0.1315 0.1151 REMARK 3 2 3.0117 - 2.3908 1.00 16174 142 0.1216 0.1372 REMARK 3 3 2.3908 - 2.0887 1.00 16066 103 0.1136 0.1223 REMARK 3 4 2.0887 - 1.8978 1.00 15962 196 0.1196 0.1438 REMARK 3 5 1.8978 - 1.7618 1.00 15953 99 0.1171 0.1103 REMARK 3 6 1.7618 - 1.6579 1.00 15951 169 0.1176 0.1161 REMARK 3 7 1.6579 - 1.5749 1.00 15876 131 0.1176 0.1284 REMARK 3 8 1.5749 - 1.5063 1.00 15894 129 0.1242 0.1317 REMARK 3 9 1.5063 - 1.4483 1.00 15843 156 0.1390 0.1267 REMARK 3 10 1.4483 - 1.3984 1.00 15850 127 0.1571 0.1682 REMARK 3 11 1.3984 - 1.3546 1.00 15772 150 0.1749 0.1671 REMARK 3 12 1.3546 - 1.3159 1.00 15845 132 0.1965 0.2076 REMARK 3 13 1.3159 - 1.2813 1.00 15754 133 0.2306 0.2549 REMARK 3 14 1.2813 - 1.2500 1.00 15731 143 0.2689 0.3145 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5004 REMARK 3 ANGLE : 1.024 6764 REMARK 3 CHIRALITY : 0.077 670 REMARK 3 PLANARITY : 0.007 901 REMARK 3 DIHEDRAL : 14.391 1782 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UUO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226367. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.7749 REMARK 200 MONOCHROMATOR : SILICON 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE MAY 1, 2016 REMARK 200 BUILT=20160617 REMARK 200 DATA SCALING SOFTWARE : XDS VERSION OCT 15, 2015 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 225442 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 29.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.50 REMARK 200 R MERGE (I) : 0.05235 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : 1.29700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.960 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SARO PROTEIN AT 277 MM WAS INCUBATED REMARK 280 WITH 10 MM REDUCED GLUTATHIONE FOR 50 MINUTES PRIOR TO SETTING REMARK 280 UP CRYSTALLIZATION EXPERIMENTS. THE DROPLET YIELDING THE CRYSTAL REMARK 280 WITH THE HIGHEST OBSERVED DIFFRACTING POWER WAS COMPOSED OF 130 REMARK 280 NL PROTEIN AND 85 NL RESERVOIR SOLUTION. THE RESERVOIR SOLUTION REMARK 280 WAS 1.35 M AMMONIUM SULFATE, 0.1 M LITHIUM SULFATE 0.1 M BIS- REMARK 280 TRISPROPANE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.40500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.11500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.19500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.11500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.40500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.19500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 1 REMARK 465 ALA B 2 REMARK 465 ILE B 3 REMARK 465 ALA B 4 REMARK 465 GLY B 5 REMARK 465 MET B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 GLU B 9 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 ILE A 3 REMARK 465 ALA A 4 REMARK 465 GLY A 5 REMARK 465 MET A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 78 HH12 ARG A 272 1.50 REMARK 500 O HOH A 676 O HOH A 689 1.92 REMARK 500 OD2 ASP A 279 O HOH A 401 1.93 REMARK 500 OE2 GLU B 41 O2 EDO B 314 1.95 REMARK 500 O3 SO4 B 303 O HOH B 401 1.97 REMARK 500 O HOH B 677 O HOH B 685 1.98 REMARK 500 O HOH B 658 O HOH B 673 2.03 REMARK 500 O HOH B 470 O HOH B 647 2.04 REMARK 500 O HOH A 401 O HOH A 727 2.07 REMARK 500 O HOH B 693 O HOH B 699 2.07 REMARK 500 O HOH B 579 O HOH B 714 2.07 REMARK 500 O HOH B 618 O HOH B 743 2.09 REMARK 500 O HOH B 682 O HOH A 674 2.11 REMARK 500 O2 EDO B 312 O HOH B 402 2.12 REMARK 500 O2 SO4 A 303 O HOH A 402 2.14 REMARK 500 N TYR B 10 O HOH B 403 2.16 REMARK 500 OE1 GLU A 250 O HOH A 403 2.16 REMARK 500 OE1 GLU B 41 O1 EDO B 314 2.18 REMARK 500 O HOH B 537 O HOH B 586 2.18 REMARK 500 O HOH B 696 O HOH B 701 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 656 O HOH B 664 3755 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 121 129.78 82.09 REMARK 500 LEU B 137 114.14 -164.29 REMARK 500 TYR B 241 73.08 -106.15 REMARK 500 GLU A 121 129.08 83.64 REMARK 500 LEU A 137 115.35 -163.62 REMARK 500 TYR A 241 72.00 -105.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 761 DISTANCE = 5.88 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 312 DBREF 5UUO B 6 293 UNP Q2G542 Q2G542_NOVAD 1 288 DBREF 5UUO A 6 293 UNP Q2G542 Q2G542_NOVAD 1 288 SEQADV 5UUO SER B 1 UNP Q2G542 EXPRESSION TAG SEQADV 5UUO ALA B 2 UNP Q2G542 EXPRESSION TAG SEQADV 5UUO ILE B 3 UNP Q2G542 EXPRESSION TAG SEQADV 5UUO ALA B 4 UNP Q2G542 EXPRESSION TAG SEQADV 5UUO GLY B 5 UNP Q2G542 EXPRESSION TAG SEQADV 5UUO SER A 1 UNP Q2G542 EXPRESSION TAG SEQADV 5UUO ALA A 2 UNP Q2G542 EXPRESSION TAG SEQADV 5UUO ILE A 3 UNP Q2G542 EXPRESSION TAG SEQADV 5UUO ALA A 4 UNP Q2G542 EXPRESSION TAG SEQADV 5UUO GLY A 5 UNP Q2G542 EXPRESSION TAG SEQRES 1 B 293 SER ALA ILE ALA GLY MET SER SER GLU TYR VAL PRO PRO SEQRES 2 B 293 LYS VAL TRP LYS TRP ASP LYS ALA ASN GLY GLY ALA PHE SEQRES 3 B 293 ALA SER VAL ASN ARG PRO VAL ALA GLY PRO THR SER GLU SEQRES 4 B 293 ARG GLU LEU PRO VAL GLY LYS HIS PRO PHE GLN VAL TYR SEQRES 5 B 293 SER LEU GLY THR PRO ASN GLY GLN LYS ALA THR ILE MET SEQRES 6 B 293 LEU GLU GLU LEU LEU GLN LEU GLY PHE SER GLU ALA GLU SEQRES 7 B 293 TYR ASP ALA TRP LEU ILE LYS ILE PHE GLU GLY ASP GLN SEQRES 8 B 293 PHE THR SER GLY PHE VAL ASP ILE ASN PRO ASN SER LYS SEQRES 9 B 293 ILE PRO ALA MET VAL ASP ARG SER GLY PRO GLU PRO PHE SEQRES 10 B 293 ARG VAL PHE GLU SER GLY ALA ILE LEU MET HIS LEU ALA SEQRES 11 B 293 GLU LYS PHE GLY VAL PHE LEU PRO THR SER GLY PRO ALA SEQRES 12 B 293 ARG ALA GLU CYS LEU SER TRP LEU PHE TRP GLN VAL GLY SEQRES 13 B 293 SER ALA PRO PHE ILE GLY GLY GLY PHE GLY HIS PHE TYR SEQRES 14 B 293 ASN TYR ALA PRO ILE LYS ILE GLU TYR ALA ILE ASP ARG SEQRES 15 B 293 TYR ALA MET GLU THR LYS ARG LEU PHE ASP VAL ALA ASN SEQRES 16 B 293 ARG ARG LEU ALA GLU SER ARG TYR LEU ALA GLY ASP GLU SEQRES 17 B 293 TYR THR ILE ALA ASP LEU ALA THR TYR THR TRP PHE GLY SEQRES 18 B 293 ASN ILE TYR ARG GLY GLU ALA TYR GLY GLU ALA ALA THR SEQRES 19 B 293 PHE LEU SER MET HIS GLU TYR GLU HIS VAL GLY ARG TRP SEQRES 20 B 293 VAL GLY GLU ILE ASP ALA ARG PRO GLY VAL LEU ARG GLY SEQRES 21 B 293 ARG LEU VAL ASN SER SER LYS GLY LEU ALA GLU ARG HIS SEQRES 22 B 293 ASP ALA SER ASP PHE ASP ALA LEU PRO PRO GLU SER LEU SEQRES 23 B 293 GLN ALA ILE VAL LYS GLY PHE SEQRES 1 A 293 SER ALA ILE ALA GLY MET SER SER GLU TYR VAL PRO PRO SEQRES 2 A 293 LYS VAL TRP LYS TRP ASP LYS ALA ASN GLY GLY ALA PHE SEQRES 3 A 293 ALA SER VAL ASN ARG PRO VAL ALA GLY PRO THR SER GLU SEQRES 4 A 293 ARG GLU LEU PRO VAL GLY LYS HIS PRO PHE GLN VAL TYR SEQRES 5 A 293 SER LEU GLY THR PRO ASN GLY GLN LYS ALA THR ILE MET SEQRES 6 A 293 LEU GLU GLU LEU LEU GLN LEU GLY PHE SER GLU ALA GLU SEQRES 7 A 293 TYR ASP ALA TRP LEU ILE LYS ILE PHE GLU GLY ASP GLN SEQRES 8 A 293 PHE THR SER GLY PHE VAL ASP ILE ASN PRO ASN SER LYS SEQRES 9 A 293 ILE PRO ALA MET VAL ASP ARG SER GLY PRO GLU PRO PHE SEQRES 10 A 293 ARG VAL PHE GLU SER GLY ALA ILE LEU MET HIS LEU ALA SEQRES 11 A 293 GLU LYS PHE GLY VAL PHE LEU PRO THR SER GLY PRO ALA SEQRES 12 A 293 ARG ALA GLU CYS LEU SER TRP LEU PHE TRP GLN VAL GLY SEQRES 13 A 293 SER ALA PRO PHE ILE GLY GLY GLY PHE GLY HIS PHE TYR SEQRES 14 A 293 ASN TYR ALA PRO ILE LYS ILE GLU TYR ALA ILE ASP ARG SEQRES 15 A 293 TYR ALA MET GLU THR LYS ARG LEU PHE ASP VAL ALA ASN SEQRES 16 A 293 ARG ARG LEU ALA GLU SER ARG TYR LEU ALA GLY ASP GLU SEQRES 17 A 293 TYR THR ILE ALA ASP LEU ALA THR TYR THR TRP PHE GLY SEQRES 18 A 293 ASN ILE TYR ARG GLY GLU ALA TYR GLY GLU ALA ALA THR SEQRES 19 A 293 PHE LEU SER MET HIS GLU TYR GLU HIS VAL GLY ARG TRP SEQRES 20 A 293 VAL GLY GLU ILE ASP ALA ARG PRO GLY VAL LEU ARG GLY SEQRES 21 A 293 ARG LEU VAL ASN SER SER LYS GLY LEU ALA GLU ARG HIS SEQRES 22 A 293 ASP ALA SER ASP PHE ASP ALA LEU PRO PRO GLU SER LEU SEQRES 23 A 293 GLN ALA ILE VAL LYS GLY PHE HET GSH B 301 69 HET GSH B 302 69 HET SO4 B 303 5 HET SO4 B 304 5 HET SO4 B 305 5 HET EDO B 306 10 HET EDO B 307 10 HET EDO B 308 10 HET EDO B 309 10 HET EDO B 310 10 HET EDO B 311 10 HET EDO B 312 10 HET EDO B 313 10 HET EDO B 314 10 HET GSH A 301 69 HET GSH A 302 69 HET SO4 A 303 5 HET EDO A 304 10 HET EDO A 305 10 HET EDO A 306 10 HET EDO A 307 10 HET EDO A 308 10 HET EDO A 309 10 HET EDO A 310 10 HET EDO A 311 10 HET EDO A 312 10 HETNAM GSH GLUTATHIONE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GSH 4(C10 H17 N3 O6 S) FORMUL 5 SO4 4(O4 S 2-) FORMUL 8 EDO 18(C2 H6 O2) FORMUL 29 HOH *762(H2 O) HELIX 1 AA1 GLY B 23 ALA B 27 5 5 HELIX 2 AA2 THR B 56 LEU B 72 1 17 HELIX 3 AA3 PHE B 74 ALA B 77 5 4 HELIX 4 AA4 LYS B 85 PHE B 92 5 8 HELIX 5 AA5 THR B 93 ASN B 100 1 8 HELIX 6 AA6 GLU B 121 GLY B 134 1 14 HELIX 7 AA7 GLY B 141 GLY B 162 1 22 HELIX 8 AA8 GLY B 164 TYR B 171 1 8 HELIX 9 AA9 ILE B 176 ALA B 199 1 24 HELIX 10 AB1 THR B 210 ARG B 225 1 16 HELIX 11 AB2 GLU B 231 LEU B 236 1 6 HELIX 12 AB3 SER B 237 GLU B 240 5 4 HELIX 13 AB4 TYR B 241 ALA B 253 1 13 HELIX 14 AB5 ARG B 254 ARG B 261 1 8 HELIX 15 AB6 ASP B 274 LEU B 281 5 8 HELIX 16 AB7 PRO B 282 GLN B 287 5 6 HELIX 17 AB8 GLY A 23 VAL A 29 5 7 HELIX 18 AB9 THR A 56 LEU A 72 1 17 HELIX 19 AC1 PHE A 74 ALA A 77 5 4 HELIX 20 AC2 GLY A 89 PHE A 92 5 4 HELIX 21 AC3 THR A 93 ASN A 100 1 8 HELIX 22 AC4 GLU A 121 GLY A 134 1 14 HELIX 23 AC5 GLY A 141 GLY A 162 1 22 HELIX 24 AC6 GLY A 164 TYR A 171 1 8 HELIX 25 AC7 ILE A 176 ALA A 199 1 24 HELIX 26 AC8 THR A 210 ARG A 225 1 16 HELIX 27 AC9 GLU A 231 LEU A 236 1 6 HELIX 28 AD1 SER A 237 GLU A 240 5 4 HELIX 29 AD2 TYR A 241 ALA A 253 1 13 HELIX 30 AD3 ARG A 254 ARG A 261 1 8 HELIX 31 AD4 ASP A 274 LEU A 281 5 8 HELIX 32 AD5 PRO A 282 GLN A 287 5 6 SHEET 1 AA1 4 TYR B 79 LEU B 83 0 SHEET 2 AA1 4 PHE B 49 SER B 53 1 N VAL B 51 O ASP B 80 SHEET 3 AA1 4 ALA B 107 ASP B 110 -1 O ALA B 107 N TYR B 52 SHEET 4 AA1 4 PHE B 117 PHE B 120 -1 O PHE B 117 N ASP B 110 SHEET 1 AA2 4 TYR A 79 LEU A 83 0 SHEET 2 AA2 4 PHE A 49 SER A 53 1 N VAL A 51 O ASP A 80 SHEET 3 AA2 4 ALA A 107 ASP A 110 -1 O ALA A 107 N TYR A 52 SHEET 4 AA2 4 PHE A 117 PHE A 120 -1 O PHE A 117 N ASP A 110 LINK SG2BGSH B 301 SG2BGSH B 302 1555 1555 2.01 LINK SG2BGSH A 301 SG2BGSH A 302 1555 1555 2.08 CISPEP 1 ILE B 105 PRO B 106 0 -4.32 CISPEP 2 ILE A 105 PRO A 106 0 -4.78 SITE 1 AC1 14 THR B 56 ASN B 58 GLN B 91 LYS B 104 SITE 2 AC1 14 ILE B 105 GLU B 121 SER B 122 GSH B 302 SITE 3 AC1 14 HOH B 417 HOH B 428 HOH B 429 HOH B 472 SITE 4 AC1 14 HOH B 485 HOH B 584 SITE 1 AC2 20 ARG A 182 PHE B 26 ASN B 30 THR B 56 SITE 2 AC2 20 ASN B 58 ALA B 158 PRO B 159 GLY B 162 SITE 3 AC2 20 GLY B 163 TRP B 219 GSH B 301 EDO B 313 SITE 4 AC2 20 HOH B 416 HOH B 428 HOH B 429 HOH B 474 SITE 5 AC2 20 HOH B 514 HOH B 569 HOH B 584 HOH B 651 SITE 1 AC3 3 ARG B 202 SER B 266 HOH B 401 SITE 1 AC4 3 HOH A 462 ARG B 196 HOH B 427 SITE 1 AC5 4 PRO B 13 LYS B 14 VAL B 15 LYS B 17 SITE 1 AC6 2 SER B 265 SER B 266 SITE 1 AC7 8 ARG B 196 ARG B 197 GLU B 200 HOH B 452 SITE 2 AC7 8 HOH B 511 HOH B 512 HOH B 526 HOH B 563 SITE 1 AC8 7 ASP A 181 MET A 185 TRP B 16 LYS B 17 SITE 2 AC8 7 ASP B 19 LYS B 20 ASN B 22 SITE 1 AC9 5 LYS B 85 SER B 265 SER B 266 HOH B 595 SITE 2 AC9 5 HOH B 618 SITE 1 AD1 5 ASP B 98 PRO B 116 HOH B 422 HOH B 445 SITE 2 AD1 5 HOH B 540 SITE 1 AD2 6 ALA B 253 ARG B 254 HOH B 405 HOH B 413 SITE 2 AD2 6 HOH B 455 HOH B 534 SITE 1 AD3 4 TYR B 224 MET B 238 HOH B 402 HOH B 537 SITE 1 AD4 8 GLY B 162 GLY B 166 HIS B 167 TYR B 171 SITE 2 AD4 8 TYR B 229 GSH B 302 HOH B 416 HOH B 423 SITE 1 AD5 6 GLU B 41 SER B 94 GLY B 95 ASP B 98 SITE 2 AD5 6 HOH B 404 HOH B 518 SITE 1 AD6 16 THR A 56 ASN A 58 ILE A 86 GLN A 91 SITE 2 AD6 16 SER A 103 LYS A 104 ILE A 105 GLU A 121 SITE 3 AD6 16 SER A 122 GSH A 302 HOH A 422 HOH A 447 SITE 4 AD6 16 HOH A 450 HOH A 473 HOH A 552 HOH A 623 SITE 1 AD7 21 PHE A 26 ASN A 30 THR A 56 ASN A 58 SITE 2 AD7 21 ALA A 158 PRO A 159 GLY A 162 GLY A 163 SITE 3 AD7 21 TRP A 219 GSH A 301 EDO A 310 HOH A 441 SITE 4 AD7 21 HOH A 447 HOH A 450 HOH A 451 HOH A 567 SITE 5 AD7 21 HOH A 575 HOH A 623 HOH A 674 HOH A 676 SITE 6 AD7 21 ARG B 182 SITE 1 AD8 5 ARG A 196 HOH A 402 HOH A 404 HOH A 405 SITE 2 AD8 5 HOH A 544 SITE 1 AD9 9 GLN A 60 ARG A 261 LEU A 262 SER A 265 SITE 2 AD9 9 VAL A 290 GLY A 292 HOH A 411 HOH A 471 SITE 3 AD9 9 HOH A 596 SITE 1 AE1 8 ARG A 196 ARG A 197 GLU A 200 HOH A 478 SITE 2 AE1 8 HOH A 500 HOH A 503 HOH A 506 HOH A 584 SITE 1 AE2 6 ASP A 98 ILE A 99 PRO A 116 HOH A 419 SITE 2 AE2 6 HOH A 432 HOH A 490 SITE 1 AE3 2 SER A 266 HOH A 578 SITE 1 AE4 7 GLY A 24 ALA A 25 ARG A 259 HOH A 424 SITE 2 AE4 7 HOH A 445 HOH A 507 HOH A 558 SITE 1 AE5 4 ASN A 264 SER A 265 SER A 266 HOH A 685 SITE 1 AE6 5 PRO A 57 TYR A 229 GSH A 302 HOH A 426 SITE 2 AE6 5 HOH A 511 SITE 1 AE7 3 TYR A 224 HIS A 239 HOH A 431 SITE 1 AE8 5 PRO A 13 LYS A 14 VAL A 15 HOH A 494 SITE 2 AE8 5 HOH A 553 CRYST1 68.810 70.390 168.230 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014533 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014207 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005944 0.00000