HEADER TRANSFERASE 22-FEB-17 5UX6 TITLE STRUCTURE OF HUMAN POFUT1 IN ITS APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PEPTIDE-O-FUCOSYLTRANSFERASE 1,O-FUCT-1; COMPND 5 EC: 2.4.1.221; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POFUT1, FUT12, KIAA0180; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS GDP-FUCOSE, NOTCH SIGNALING, POFUT1, T-ALL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.XU,B.MCMILLAN,S.C.BLACKLOW REVDAT 6 04-OCT-23 5UX6 1 HETSYN REVDAT 5 29-JUL-20 5UX6 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE REVDAT 4 04-DEC-19 5UX6 1 REMARK REVDAT 3 18-APR-18 5UX6 1 JRNL REVDAT 2 27-SEP-17 5UX6 1 REMARK REVDAT 1 05-APR-17 5UX6 0 JRNL AUTH B.J.MCMILLAN,B.ZIMMERMAN,E.D.EGAN,M.LOFGREN,X.XU,A.HESSER, JRNL AUTH 2 S.C.BLACKLOW JRNL TITL STRUCTURE OF HUMAN POFUT1, ITS REQUIREMENT IN JRNL TITL 2 LIGAND-INDEPENDENT ONCOGENIC NOTCH SIGNALING, AND FUNCTIONAL JRNL TITL 3 EFFECTS OF DOWLING-DEGOS MUTATIONS. JRNL REF GLYCOBIOLOGY V. 27 777 2017 JRNL REFN ESSN 1460-2423 JRNL PMID 28334865 JRNL DOI 10.1093/GLYCOB/CWX020 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 52549 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.790 REMARK 3 FREE R VALUE TEST SET COUNT : 1993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.7879 - 5.0284 0.97 3606 146 0.1737 0.2454 REMARK 3 2 5.0284 - 3.9918 0.98 3633 137 0.1240 0.1676 REMARK 3 3 3.9918 - 3.4874 0.99 3649 143 0.1293 0.1824 REMARK 3 4 3.4874 - 3.1686 0.99 3620 150 0.1434 0.1698 REMARK 3 5 3.1686 - 2.9416 0.99 3629 133 0.1646 0.1974 REMARK 3 6 2.9416 - 2.7681 0.99 3604 148 0.1763 0.2180 REMARK 3 7 2.7681 - 2.6295 0.98 3619 139 0.1879 0.2395 REMARK 3 8 2.6295 - 2.5151 0.98 3582 140 0.2025 0.2706 REMARK 3 9 2.5151 - 2.4182 0.99 3624 153 0.2200 0.2326 REMARK 3 10 2.4182 - 2.3348 0.99 3625 132 0.2331 0.2697 REMARK 3 11 2.3348 - 2.2618 0.99 3622 159 0.2488 0.2970 REMARK 3 12 2.2618 - 2.1971 0.99 3623 124 0.2601 0.2942 REMARK 3 13 2.1971 - 2.1393 0.99 3622 164 0.2905 0.3354 REMARK 3 14 2.1393 - 2.0871 0.96 3498 125 0.3202 0.3617 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5875 REMARK 3 ANGLE : 0.710 7989 REMARK 3 CHIRALITY : 0.044 839 REMARK 3 PLANARITY : 0.004 1024 REMARK 3 DIHEDRAL : 13.093 3499 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1985 13.9642 6.4740 REMARK 3 T TENSOR REMARK 3 T11: 0.1993 T22: 0.2236 REMARK 3 T33: 0.1202 T12: -0.0570 REMARK 3 T13: -0.0017 T23: -0.0280 REMARK 3 L TENSOR REMARK 3 L11: 2.2734 L22: 2.5492 REMARK 3 L33: 2.3190 L12: -0.4257 REMARK 3 L13: -0.5335 L23: 0.2221 REMARK 3 S TENSOR REMARK 3 S11: -0.0442 S12: 0.3693 S13: -0.2019 REMARK 3 S21: -0.2429 S22: 0.0396 S23: 0.0762 REMARK 3 S31: 0.1802 S32: -0.2435 S33: -0.0037 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8911 21.0343 28.8299 REMARK 3 T TENSOR REMARK 3 T11: 0.1090 T22: 0.1246 REMARK 3 T33: 0.1429 T12: 0.0004 REMARK 3 T13: -0.0275 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.7562 L22: 1.0071 REMARK 3 L33: 1.3235 L12: -0.4852 REMARK 3 L13: -0.5912 L23: 0.5171 REMARK 3 S TENSOR REMARK 3 S11: -0.0624 S12: 0.0221 S13: -0.0898 REMARK 3 S21: 0.0095 S22: 0.0372 S23: 0.1006 REMARK 3 S31: 0.0516 S32: -0.0372 S33: 0.0308 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8811 58.5677 15.8646 REMARK 3 T TENSOR REMARK 3 T11: 0.1374 T22: 0.1117 REMARK 3 T33: 0.1035 T12: 0.0112 REMARK 3 T13: -0.0074 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 2.9245 L22: 3.0619 REMARK 3 L33: 3.0209 L12: -0.7972 REMARK 3 L13: 0.2283 L23: -0.1939 REMARK 3 S TENSOR REMARK 3 S11: 0.0260 S12: 0.2173 S13: -0.0795 REMARK 3 S21: -0.1605 S22: -0.0351 S23: 0.0916 REMARK 3 S31: 0.0713 S32: 0.0758 S33: -0.0352 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 112 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2825 73.5937 14.9484 REMARK 3 T TENSOR REMARK 3 T11: 0.1765 T22: 0.1888 REMARK 3 T33: 0.1498 T12: 0.0209 REMARK 3 T13: -0.0383 T23: 0.0410 REMARK 3 L TENSOR REMARK 3 L11: 1.8328 L22: 3.1755 REMARK 3 L33: 2.0401 L12: -0.3030 REMARK 3 L13: -0.0343 L23: 0.7126 REMARK 3 S TENSOR REMARK 3 S11: -0.0328 S12: 0.0894 S13: 0.0706 REMARK 3 S21: -0.1581 S22: -0.1092 S23: 0.1978 REMARK 3 S31: -0.3320 S32: -0.0795 S33: 0.1285 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 182 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2321 53.8455 21.4956 REMARK 3 T TENSOR REMARK 3 T11: 0.1482 T22: 0.1195 REMARK 3 T33: 0.1295 T12: -0.0233 REMARK 3 T13: -0.0036 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.4119 L22: 3.3917 REMARK 3 L33: 1.5495 L12: -1.5812 REMARK 3 L13: 0.5629 L23: -1.1262 REMARK 3 S TENSOR REMARK 3 S11: -0.0309 S12: 0.0640 S13: -0.1082 REMARK 3 S21: -0.1513 S22: 0.0103 S23: 0.2406 REMARK 3 S31: 0.1015 S32: -0.0555 S33: 0.0015 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 230 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9671 53.7174 39.7168 REMARK 3 T TENSOR REMARK 3 T11: 0.1237 T22: 0.1157 REMARK 3 T33: 0.1826 T12: 0.0286 REMARK 3 T13: 0.0223 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 0.6987 L22: 2.6420 REMARK 3 L33: 1.5690 L12: 0.0852 REMARK 3 L13: 0.0862 L23: 2.0477 REMARK 3 S TENSOR REMARK 3 S11: 0.0151 S12: 0.0525 S13: 0.0276 REMARK 3 S21: -0.0179 S22: -0.0293 S23: -0.2517 REMARK 3 S31: -0.0653 S32: 0.0659 S33: -0.0218 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 255 THROUGH 286 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4173 60.1735 44.9083 REMARK 3 T TENSOR REMARK 3 T11: 0.2192 T22: 0.3091 REMARK 3 T33: 0.2694 T12: 0.0011 REMARK 3 T13: 0.0175 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 0.5650 L22: 2.4179 REMARK 3 L33: 1.7303 L12: -0.2412 REMARK 3 L13: 0.1656 L23: -0.7311 REMARK 3 S TENSOR REMARK 3 S11: -0.0454 S12: 0.0131 S13: -0.1463 REMARK 3 S21: 0.1743 S22: 0.2214 S23: 0.3859 REMARK 3 S31: 0.0764 S32: -0.5415 S33: -0.1503 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 287 THROUGH 383 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0258 44.0458 38.0292 REMARK 3 T TENSOR REMARK 3 T11: 0.1075 T22: 0.0976 REMARK 3 T33: 0.1353 T12: 0.0303 REMARK 3 T13: 0.0338 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 2.1461 L22: 1.8834 REMARK 3 L33: 2.6788 L12: -0.0695 REMARK 3 L13: 1.0121 L23: -0.7606 REMARK 3 S TENSOR REMARK 3 S11: 0.0191 S12: -0.0113 S13: 0.0846 REMARK 3 S21: 0.0148 S22: -0.0457 S23: -0.1348 REMARK 3 S31: -0.0080 S32: 0.0083 S33: 0.0247 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UX6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226550. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52549 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.087 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3ZY4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16.5% V/V PEG3350, 0.05% W/V OCTYL REMARK 280 -BETA-D-GLUCOSIDE, 0.5% V/V GLYCEROL, AND 100 MM SODIUM CITRATE REMARK 280 PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 66.11800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 24 REMARK 465 PRO A 25 REMARK 465 ALA A 26 REMARK 465 GLY A 27 REMARK 465 LYS A 77 REMARK 465 PRO A 78 REMARK 465 HIS A 385 REMARK 465 HIS A 386 REMARK 465 HIS A 387 REMARK 465 HIS A 388 REMARK 465 HIS A 389 REMARK 465 HIS A 390 REMARK 465 MET B 24 REMARK 465 PRO B 25 REMARK 465 ALA B 26 REMARK 465 GLY B 27 REMARK 465 HIS B 75 REMARK 465 HIS B 76 REMARK 465 LYS B 77 REMARK 465 LEU B 384 REMARK 465 HIS B 385 REMARK 465 HIS B 386 REMARK 465 HIS B 387 REMARK 465 HIS B 388 REMARK 465 HIS B 389 REMARK 465 HIS B 390 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 133 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 138 CG CD CE NZ REMARK 470 LYS A 246 CG CD CE NZ REMARK 470 LYS A 253 CG CD CE NZ REMARK 470 GLU B 144 CG CD OE1 OE2 REMARK 470 GLN B 180 CG CD OE1 NE2 REMARK 470 GLN B 266 CG CD OE1 NE2 REMARK 470 SER B 271 OG REMARK 470 ARG B 272 CG CD NE CZ NH1 NH2 REMARK 470 SER B 273 OG REMARK 470 GLU B 335 CG CD OE1 OE2 REMARK 470 LYS B 383 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR B 34 O HOH B 508 1.52 REMARK 500 O GLN B 266 H VAL B 268 1.56 REMARK 500 HH TYR B 270 O HOH B 502 1.56 REMARK 500 HH TYR A 270 O HOH A 505 1.58 REMARK 500 HZ1 LYS B 111 O HOH B 505 1.59 REMARK 500 O HOH B 671 O HOH B 677 1.89 REMARK 500 O HOH B 641 O HOH B 770 1.92 REMARK 500 O HOH A 533 O HOH A 774 1.94 REMARK 500 O HOH A 603 O HOH A 681 1.95 REMARK 500 O PRO A 150 O HOH A 501 2.02 REMARK 500 O HOH B 730 O HOH B 806 2.03 REMARK 500 OD1 ASP B 244 O HOH B 501 2.04 REMARK 500 O HOH A 680 O HOH A 681 2.06 REMARK 500 O HOH B 519 O HOH B 768 2.06 REMARK 500 O HOH A 802 O HOH A 803 2.07 REMARK 500 O HOH A 501 O HOH A 751 2.09 REMARK 500 OE1 GLN A 88 O HOH A 502 2.11 REMARK 500 O HOH A 680 O HOH A 721 2.12 REMARK 500 O HOH B 754 O HOH B 821 2.12 REMARK 500 O HOH A 783 O HOH A 801 2.13 REMARK 500 OD2 ASP A 286 O HOH A 503 2.13 REMARK 500 O HOH A 718 O HOH A 744 2.13 REMARK 500 O HOH A 742 O HOH A 769 2.14 REMARK 500 O HOH A 599 O HOH A 755 2.15 REMARK 500 O HOH B 746 O HOH B 812 2.17 REMARK 500 O HOH A 701 O HOH A 779 2.18 REMARK 500 O HOH B 780 O HOH B 827 2.18 REMARK 500 OH TYR B 270 O HOH B 502 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 43 -157.00 -93.72 REMARK 500 THR A 81 149.67 -171.15 REMARK 500 LYS A 137 6.21 -68.97 REMARK 500 LYS A 138 21.32 -140.12 REMARK 500 ILE A 241 15.40 -140.31 REMARK 500 MET A 262 -117.56 43.34 REMARK 500 SER A 312 -94.57 -163.04 REMARK 500 ARG B 43 -158.97 -93.63 REMARK 500 TRP B 117 58.64 -140.52 REMARK 500 PHE B 170 35.41 -88.76 REMARK 500 ILE B 241 16.77 -140.63 REMARK 500 HIS B 260 71.00 -112.10 REMARK 500 CYS B 267 -50.10 51.75 REMARK 500 SER B 312 -94.83 -165.37 REMARK 500 MET B 378 89.23 -160.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 802 DISTANCE = 7.27 ANGSTROMS REMARK 525 HOH A 803 DISTANCE = 8.32 ANGSTROMS REMARK 525 HOH B 828 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B 829 DISTANCE = 6.22 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5UXH RELATED DB: PDB DBREF 5UX6 A 24 384 UNP Q9H488 OFUT1_HUMAN 24 384 DBREF 5UX6 B 24 384 UNP Q9H488 OFUT1_HUMAN 24 384 SEQADV 5UX6 ALA A 160 UNP Q9H488 ASN 160 ENGINEERED MUTATION SEQADV 5UX6 HIS A 385 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS A 386 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS A 387 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS A 388 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS A 389 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS A 390 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 ALA B 160 UNP Q9H488 ASN 160 ENGINEERED MUTATION SEQADV 5UX6 HIS B 385 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS B 386 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS B 387 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS B 388 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS B 389 UNP Q9H488 EXPRESSION TAG SEQADV 5UX6 HIS B 390 UNP Q9H488 EXPRESSION TAG SEQRES 1 A 367 MET PRO ALA GLY SER TRP ASP PRO ALA GLY TYR LEU LEU SEQRES 2 A 367 TYR CYS PRO CYS MET GLY ARG PHE GLY ASN GLN ALA ASP SEQRES 3 A 367 HIS PHE LEU GLY SER LEU ALA PHE ALA LYS LEU LEU ASN SEQRES 4 A 367 ARG THR LEU ALA VAL PRO PRO TRP ILE GLU TYR GLN HIS SEQRES 5 A 367 HIS LYS PRO PRO PHE THR ASN LEU HIS VAL SER TYR GLN SEQRES 6 A 367 LYS TYR PHE LYS LEU GLU PRO LEU GLN ALA TYR HIS ARG SEQRES 7 A 367 VAL ILE SER LEU GLU ASP PHE MET GLU LYS LEU ALA PRO SEQRES 8 A 367 THR HIS TRP PRO PRO GLU LYS ARG VAL ALA TYR CYS PHE SEQRES 9 A 367 GLU VAL ALA ALA GLN ARG SER PRO ASP LYS LYS THR CYS SEQRES 10 A 367 PRO MET LYS GLU GLY ASN PRO PHE GLY PRO PHE TRP ASP SEQRES 11 A 367 GLN PHE HIS VAL SER PHE ALA LYS SER GLU LEU PHE THR SEQRES 12 A 367 GLY ILE SER PHE SER ALA SER TYR ARG GLU GLN TRP SER SEQRES 13 A 367 GLN ARG PHE SER PRO LYS GLU HIS PRO VAL LEU ALA LEU SEQRES 14 A 367 PRO GLY ALA PRO ALA GLN PHE PRO VAL LEU GLU GLU HIS SEQRES 15 A 367 ARG PRO LEU GLN LYS TYR MET VAL TRP SER ASP GLU MET SEQRES 16 A 367 VAL LYS THR GLY GLU ALA GLN ILE HIS ALA HIS LEU VAL SEQRES 17 A 367 ARG PRO TYR VAL GLY ILE HIS LEU ARG ILE GLY SER ASP SEQRES 18 A 367 TRP LYS ASN ALA CYS ALA MET LEU LYS ASP GLY THR ALA SEQRES 19 A 367 GLY SER HIS PHE MET ALA SER PRO GLN CYS VAL GLY TYR SEQRES 20 A 367 SER ARG SER THR ALA ALA PRO LEU THR MET THR MET CYS SEQRES 21 A 367 LEU PRO ASP LEU LYS GLU ILE GLN ARG ALA VAL LYS LEU SEQRES 22 A 367 TRP VAL ARG SER LEU ASP ALA GLN SER VAL TYR VAL ALA SEQRES 23 A 367 THR ASP SER GLU SER TYR VAL PRO GLU LEU GLN GLN LEU SEQRES 24 A 367 PHE LYS GLY LYS VAL LYS VAL VAL SER LEU LYS PRO GLU SEQRES 25 A 367 VAL ALA GLN VAL ASP LEU TYR ILE LEU GLY GLN ALA ASP SEQRES 26 A 367 HIS PHE ILE GLY ASN CYS VAL SER SER PHE THR ALA PHE SEQRES 27 A 367 VAL LYS ARG GLU ARG ASP LEU GLN GLY ARG PRO SER SER SEQRES 28 A 367 PHE PHE GLY MET ASP ARG PRO PRO LYS LEU HIS HIS HIS SEQRES 29 A 367 HIS HIS HIS SEQRES 1 B 367 MET PRO ALA GLY SER TRP ASP PRO ALA GLY TYR LEU LEU SEQRES 2 B 367 TYR CYS PRO CYS MET GLY ARG PHE GLY ASN GLN ALA ASP SEQRES 3 B 367 HIS PHE LEU GLY SER LEU ALA PHE ALA LYS LEU LEU ASN SEQRES 4 B 367 ARG THR LEU ALA VAL PRO PRO TRP ILE GLU TYR GLN HIS SEQRES 5 B 367 HIS LYS PRO PRO PHE THR ASN LEU HIS VAL SER TYR GLN SEQRES 6 B 367 LYS TYR PHE LYS LEU GLU PRO LEU GLN ALA TYR HIS ARG SEQRES 7 B 367 VAL ILE SER LEU GLU ASP PHE MET GLU LYS LEU ALA PRO SEQRES 8 B 367 THR HIS TRP PRO PRO GLU LYS ARG VAL ALA TYR CYS PHE SEQRES 9 B 367 GLU VAL ALA ALA GLN ARG SER PRO ASP LYS LYS THR CYS SEQRES 10 B 367 PRO MET LYS GLU GLY ASN PRO PHE GLY PRO PHE TRP ASP SEQRES 11 B 367 GLN PHE HIS VAL SER PHE ALA LYS SER GLU LEU PHE THR SEQRES 12 B 367 GLY ILE SER PHE SER ALA SER TYR ARG GLU GLN TRP SER SEQRES 13 B 367 GLN ARG PHE SER PRO LYS GLU HIS PRO VAL LEU ALA LEU SEQRES 14 B 367 PRO GLY ALA PRO ALA GLN PHE PRO VAL LEU GLU GLU HIS SEQRES 15 B 367 ARG PRO LEU GLN LYS TYR MET VAL TRP SER ASP GLU MET SEQRES 16 B 367 VAL LYS THR GLY GLU ALA GLN ILE HIS ALA HIS LEU VAL SEQRES 17 B 367 ARG PRO TYR VAL GLY ILE HIS LEU ARG ILE GLY SER ASP SEQRES 18 B 367 TRP LYS ASN ALA CYS ALA MET LEU LYS ASP GLY THR ALA SEQRES 19 B 367 GLY SER HIS PHE MET ALA SER PRO GLN CYS VAL GLY TYR SEQRES 20 B 367 SER ARG SER THR ALA ALA PRO LEU THR MET THR MET CYS SEQRES 21 B 367 LEU PRO ASP LEU LYS GLU ILE GLN ARG ALA VAL LYS LEU SEQRES 22 B 367 TRP VAL ARG SER LEU ASP ALA GLN SER VAL TYR VAL ALA SEQRES 23 B 367 THR ASP SER GLU SER TYR VAL PRO GLU LEU GLN GLN LEU SEQRES 24 B 367 PHE LYS GLY LYS VAL LYS VAL VAL SER LEU LYS PRO GLU SEQRES 25 B 367 VAL ALA GLN VAL ASP LEU TYR ILE LEU GLY GLN ALA ASP SEQRES 26 B 367 HIS PHE ILE GLY ASN CYS VAL SER SER PHE THR ALA PHE SEQRES 27 B 367 VAL LYS ARG GLU ARG ASP LEU GLN GLY ARG PRO SER SER SEQRES 28 B 367 PHE PHE GLY MET ASP ARG PRO PRO LYS LEU HIS HIS HIS SEQRES 29 B 367 HIS HIS HIS HET NAG A 401 27 HET GOL A 402 14 HET NAG B 401 28 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 GOL C3 H8 O3 FORMUL 6 HOH *632(H2 O) HELIX 1 AA1 ARG A 43 ASN A 62 1 20 HELIX 2 AA2 SER A 86 PHE A 91 1 6 HELIX 3 AA3 LEU A 93 TYR A 99 5 7 HELIX 4 AA4 LEU A 105 LEU A 112 1 8 HELIX 5 AA5 LEU A 112 TRP A 117 1 6 HELIX 6 AA6 PRO A 118 LYS A 121 5 4 HELIX 7 AA7 GLU A 128 ARG A 133 1 6 HELIX 8 AA8 PRO A 147 GLN A 154 1 8 HELIX 9 AA9 SER A 171 SER A 173 5 3 HELIX 10 AB1 TYR A 174 PHE A 182 1 9 HELIX 11 AB2 LEU A 202 MET A 212 5 11 HELIX 12 AB3 SER A 215 LEU A 230 1 16 HELIX 13 AB4 GLY A 242 ASP A 254 1 13 HELIX 14 AB5 SER A 264 GLY A 269 1 6 HELIX 15 AB6 SER A 271 ALA A 275 5 5 HELIX 16 AB7 THR A 279 LEU A 284 1 6 HELIX 17 AB8 ASP A 286 ASP A 302 1 17 HELIX 18 AB9 TYR A 315 PHE A 323 1 9 HELIX 19 AC1 VAL A 336 GLN A 346 1 11 HELIX 20 AC2 SER A 356 GLY A 370 1 15 HELIX 21 AC3 ARG B 43 ASN B 62 1 20 HELIX 22 AC4 SER B 86 PHE B 91 1 6 HELIX 23 AC5 LEU B 93 ALA B 98 1 6 HELIX 24 AC6 LEU B 105 LEU B 112 1 8 HELIX 25 AC7 LEU B 112 TRP B 117 1 6 HELIX 26 AC8 PRO B 118 LYS B 121 5 4 HELIX 27 AC9 GLU B 128 GLN B 132 1 5 HELIX 28 AD1 PRO B 147 GLN B 154 1 8 HELIX 29 AD2 SER B 171 SER B 173 5 3 HELIX 30 AD3 TYR B 174 PHE B 182 1 9 HELIX 31 AD4 LEU B 202 MET B 212 5 11 HELIX 32 AD5 SER B 215 LEU B 230 1 16 HELIX 33 AD6 GLY B 242 GLY B 255 1 14 HELIX 34 AD7 SER B 264 GLY B 269 1 6 HELIX 35 AD8 SER B 271 ALA B 275 5 5 HELIX 36 AD9 THR B 279 LEU B 284 1 6 HELIX 37 AE1 ASP B 286 ASP B 302 1 17 HELIX 38 AE2 TYR B 315 PHE B 323 1 9 HELIX 39 AE3 VAL B 336 GLN B 346 1 11 HELIX 40 AE4 SER B 356 GLY B 370 1 15 SHEET 1 AA1 4 VAL A 102 SER A 104 0 SHEET 2 AA1 4 THR A 64 VAL A 67 1 N LEU A 65 O ILE A 103 SHEET 3 AA1 4 TYR A 34 TYR A 37 1 N LEU A 35 O ALA A 66 SHEET 4 AA1 4 VAL A 189 LEU A 192 1 O LEU A 190 N LEU A 36 SHEET 1 AA2 2 TRP A 70 GLU A 72 0 SHEET 2 AA2 2 LEU A 83 VAL A 85 -1 O LEU A 83 N GLU A 72 SHEET 1 AA3 2 VAL A 123 PHE A 127 0 SHEET 2 AA3 2 LYS A 161 PHE A 165 1 O GLU A 163 N ALA A 124 SHEET 1 AA4 5 LYS A 328 VAL A 330 0 SHEET 2 AA4 5 SER A 305 THR A 310 1 N VAL A 306 O VAL A 330 SHEET 3 AA4 5 TYR A 234 LEU A 239 1 N ILE A 237 O ALA A 309 SHEET 4 AA4 5 HIS A 349 GLY A 352 1 O HIS A 349 N GLY A 236 SHEET 5 AA4 5 SER A 373 PHE A 375 1 O SER A 374 N PHE A 350 SHEET 1 AA5 4 VAL B 102 SER B 104 0 SHEET 2 AA5 4 THR B 64 VAL B 67 1 N LEU B 65 O ILE B 103 SHEET 3 AA5 4 TYR B 34 TYR B 37 1 N LEU B 35 O ALA B 66 SHEET 4 AA5 4 VAL B 189 LEU B 192 1 O LEU B 190 N LEU B 36 SHEET 1 AA6 2 TRP B 70 GLU B 72 0 SHEET 2 AA6 2 LEU B 83 VAL B 85 -1 O LEU B 83 N GLU B 72 SHEET 1 AA7 2 VAL B 123 PHE B 127 0 SHEET 2 AA7 2 LYS B 161 PHE B 165 1 O GLU B 163 N ALA B 124 SHEET 1 AA8 5 LYS B 328 VAL B 330 0 SHEET 2 AA8 5 SER B 305 THR B 310 1 N VAL B 306 O VAL B 330 SHEET 3 AA8 5 TYR B 234 LEU B 239 1 N LEU B 239 O ALA B 309 SHEET 4 AA8 5 HIS B 349 GLY B 352 1 O HIS B 349 N GLY B 236 SHEET 5 AA8 5 SER B 373 PHE B 375 1 O SER B 374 N GLY B 352 SSBOND 1 CYS A 38 CYS A 40 1555 1555 2.03 SSBOND 2 CYS A 126 CYS A 140 1555 1555 2.03 SSBOND 3 CYS A 249 CYS A 283 1555 1555 2.03 SSBOND 4 CYS A 267 CYS A 354 1555 1555 2.03 SSBOND 5 CYS B 38 CYS B 40 1555 1555 2.03 SSBOND 6 CYS B 126 CYS B 140 1555 1555 2.05 SSBOND 7 CYS B 249 CYS B 283 1555 1555 2.03 SSBOND 8 CYS B 267 CYS B 354 1555 1555 2.03 LINK ND2 ASN A 62 C1 NAG A 401 1555 1555 1.42 LINK ND2 ASN B 62 C1 NAG B 401 1555 1555 1.45 CISPEP 1 ASN A 146 PRO A 147 0 1.40 CISPEP 2 PHE A 199 PRO A 200 0 1.09 CISPEP 3 ARG A 232 PRO A 233 0 -5.24 CISPEP 4 ASN B 146 PRO B 147 0 4.70 CISPEP 5 PHE B 199 PRO B 200 0 0.05 CISPEP 6 ARG B 232 PRO B 233 0 -10.65 CRYST1 50.198 132.236 72.055 90.00 106.44 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019921 0.000000 0.005877 0.00000 SCALE2 0.000000 0.007562 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014470 0.00000