HEADER LIGASE 07-MAR-17 5V3O
TITLE CEREBLON IN COMPLEX WITH DDB1 AND CC-220
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA DAMAGE-BINDING PROTEIN 1;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: DDB P127 SUBUNIT,DNA DAMAGE-BINDING PROTEIN A,DDBA,DAMAGE-
COMPND 5 SPECIFIC DNA-BINDING PROTEIN 1,HBV X-ASSOCIATED PROTEIN 1,XAP-1,UV-
COMPND 6 DAMAGED DNA-BINDING FACTOR,UV-DAMAGED DNA-BINDING PROTEIN 1,UV-DDB 1,
COMPND 7 XPE-BINDING FACTOR,XPE-BF,XERODERMA PIGMENTOSUM GROUP E-COMPLEMENTING
COMPND 8 PROTEIN,XPCE;
COMPND 9 ENGINEERED: YES;
COMPND 10 MOL_ID: 2;
COMPND 11 MOLECULE: PROTEIN CEREBLON;
COMPND 12 CHAIN: C;
COMPND 13 FRAGMENT: RESIDUES 40-442;
COMPND 14 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: DDB1, XAP1;
SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108;
SOURCE 9 MOL_ID: 2;
SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 11 ORGANISM_COMMON: HUMAN;
SOURCE 12 ORGANISM_TAXID: 9606;
SOURCE 13 GENE: CRBN, AD-006;
SOURCE 14 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 15 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;
SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108
KEYWDS E3, UBIQUITIN LIGASE, CRL4, DCAF, LIGASE
EXPDTA X-RAY DIFFRACTION
AUTHOR M.MATYSKIELA,B.PAGARIGAN,P.CHAMBERLAIN
REVDAT 3 13-NOV-24 5V3O 1 REMARK
REVDAT 2 07-FEB-18 5V3O 1 JRNL
REVDAT 1 03-MAY-17 5V3O 0
JRNL AUTH M.E.MATYSKIELA,W.ZHANG,H.W.MAN,G.MULLER,G.KHAMBATTA,
JRNL AUTH 2 F.BACULI,M.HICKMAN,L.LEBRUN,B.PAGARIGAN,G.CARMEL,C.C.LU,
JRNL AUTH 3 G.LU,M.RILEY,Y.SATOH,P.SCHAFER,T.O.DANIEL,J.CARMICHAEL,
JRNL AUTH 4 B.E.CATHERS,P.P.CHAMBERLAIN
JRNL TITL A CEREBLON MODULATOR (CC-220) WITH IMPROVED DEGRADATION OF
JRNL TITL 2 IKAROS AND AIOLOS.
JRNL REF J. MED. CHEM. V. 61 535 2018
JRNL REFN ISSN 1520-4804
JRNL PMID 28425720
JRNL DOI 10.1021/ACS.JMEDCHEM.6B01921
REMARK 2
REMARK 2 RESOLUTION. 3.20 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0107
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 3 NUMBER OF REFLECTIONS : 38828
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.207
REMARK 3 R VALUE (WORKING SET) : 0.204
REMARK 3 FREE R VALUE : 0.267
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 2023
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.28
REMARK 3 REFLECTION IN BIN (WORKING SET) : 2766
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.15
REMARK 3 BIN R VALUE (WORKING SET) : 0.2780
REMARK 3 BIN FREE R VALUE SET COUNT : 151
REMARK 3 BIN FREE R VALUE : 0.3290
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 11141
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 34
REMARK 3 SOLVENT ATOMS : 0
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 95.20
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.42000
REMARK 3 B22 (A**2) : 0.09000
REMARK 3 B33 (A**2) : 0.33000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): NULL
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.468
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.344
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 41.998
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.880
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11423 ; 0.009 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): 10793 ; 0.002 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15519 ; 1.506 ; 1.960
REMARK 3 BOND ANGLES OTHERS (DEGREES): 24721 ; 2.068 ; 2.998
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1438 ; 8.430 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 479 ;37.678 ;24.509
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1885 ;18.582 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 54 ;19.117 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1806 ; 0.081 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12897 ; 0.007 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): 2546 ; 0.002 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5800 ; 3.001 ; 7.802
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 5799 ; 2.999 ; 7.801
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7222 ; 5.142 ;11.694
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 7223 ; 5.142 ;11.695
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5623 ; 2.666 ; 8.038
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 5622 ; 2.667 ; 8.038
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 8298 ; 4.632 ;11.962
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 11676 ; 7.571 ;60.336
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 11677 ; 7.571 ;60.337
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 4
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : C 249 C 428
REMARK 3 ORIGIN FOR THE GROUP (A): 33.3628 41.9836 -41.4300
REMARK 3 T TENSOR
REMARK 3 T11: 0.1915 T22: 0.2362
REMARK 3 T33: 0.1769 T12: -0.1036
REMARK 3 T13: 0.0092 T23: 0.0394
REMARK 3 L TENSOR
REMARK 3 L11: 0.9473 L22: 0.9759
REMARK 3 L33: 0.6219 L12: 0.6573
REMARK 3 L13: -0.7289 L23: -0.6708
REMARK 3 S TENSOR
REMARK 3 S11: -0.1549 S12: 0.1829 S13: 0.0060
REMARK 3 S21: 0.0655 S22: 0.0678 S23: -0.1509
REMARK 3 S31: 0.0995 S32: -0.1267 S33: 0.0871
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : C 47 C 186
REMARK 3 ORIGIN FOR THE GROUP (A): 36.5579 48.4540 -20.4681
REMARK 3 T TENSOR
REMARK 3 T11: 0.2186 T22: 0.1705
REMARK 3 T33: 0.2550 T12: 0.0113
REMARK 3 T13: -0.0870 T23: -0.0824
REMARK 3 L TENSOR
REMARK 3 L11: 0.4227 L22: 0.2134
REMARK 3 L33: 2.3797 L12: 0.2888
REMARK 3 L13: -0.9298 L23: -0.6994
REMARK 3 S TENSOR
REMARK 3 S11: -0.0346 S12: -0.1274 S13: 0.0987
REMARK 3 S21: -0.0131 S22: -0.0253 S23: 0.0229
REMARK 3 S31: 0.0926 S32: 0.1382 S33: 0.0598
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 392 A 709
REMARK 3 ORIGIN FOR THE GROUP (A): -51.9673 12.4682 -21.7473
REMARK 3 T TENSOR
REMARK 3 T11: 0.1568 T22: 0.1297
REMARK 3 T33: 0.4093 T12: 0.0500
REMARK 3 T13: 0.0382 T23: -0.1324
REMARK 3 L TENSOR
REMARK 3 L11: 0.9531 L22: 0.9226
REMARK 3 L33: 0.9337 L12: -0.1882
REMARK 3 L13: 0.8676 L23: -0.2514
REMARK 3 S TENSOR
REMARK 3 S11: -0.2649 S12: -0.0526 S13: 0.2059
REMARK 3 S21: 0.0833 S22: -0.1115 S23: 0.1270
REMARK 3 S31: -0.1631 S32: -0.0553 S33: 0.3763
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 NUMBER OF COMPONENTS GROUP : 2
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 2 A 391
REMARK 3 RESIDUE RANGE : A 710 A 1140
REMARK 3 ORIGIN FOR THE GROUP (A): -1.7300 16.0981 -23.5120
REMARK 3 T TENSOR
REMARK 3 T11: 0.2937 T22: 0.1739
REMARK 3 T33: 0.0953 T12: -0.0258
REMARK 3 T13: 0.0498 T23: -0.0551
REMARK 3 L TENSOR
REMARK 3 L11: 0.2146 L22: 0.2810
REMARK 3 L33: 0.3914 L12: 0.0048
REMARK 3 L13: 0.1219 L23: 0.0000
REMARK 3 S TENSOR
REMARK 3 S11: -0.1067 S12: -0.0775 S13: -0.0075
REMARK 3 S21: -0.1073 S22: 0.1425 S23: 0.0099
REMARK 3 S31: 0.0066 S32: 0.0735 S33: -0.0358
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 5V3O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAR-17.
REMARK 100 THE DEPOSITION ID IS D_1000226834.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 11-APR-15
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 21-ID-F
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40911
REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200
REMARK 200 RESOLUTION RANGE LOW (A) : 50.010
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 200 DATA REDUNDANCY : 5.800
REMARK 200 R MERGE (I) : 0.08900
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.8000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 64.83
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 200MM NACL, 20% PEG 3350, VAPOR
REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 55.51450
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.24350
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.44300
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.24350
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.51450
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.44300
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 4300 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 59150 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 GLU A 210
REMARK 465 GLU A 288
REMARK 465 GLU A 289
REMARK 465 GLN A 290
REMARK 465 MET A 291
REMARK 465 ASP A 292
REMARK 465 GLY A 293
REMARK 465 THR A 294
REMARK 465 VAL A 295
REMARK 465 GLY A 547
REMARK 465 ASP A 548
REMARK 465 SER A 549
REMARK 465 ASN A 550
REMARK 465 THR A 745
REMARK 465 SER A 746
REMARK 465 GLY A 747
REMARK 465 GLY A 748
REMARK 465 LEU A 770
REMARK 465 PHE A 771
REMARK 465 SER A 772
REMARK 465 SER A 773
REMARK 465 SER A 774
REMARK 465 THR A 775
REMARK 465 ALA A 776
REMARK 465 PRO A 777
REMARK 465 HIS A 778
REMARK 465 GLU A 779
REMARK 465 THR A 780
REMARK 465 SER A 781
REMARK 465 PHE A 782
REMARK 465 GLY A 783
REMARK 465 SER A 981
REMARK 465 ALA A 982
REMARK 465 ALA A 983
REMARK 465 THR A 984
REMARK 465 THR A 985
REMARK 465 ASP A 986
REMARK 465 GLN A 1015
REMARK 465 ASN A 1016
REMARK 465 LEU A 1017
REMARK 465 GLY A 1018
REMARK 465 GLU A 1019
REMARK 465 THR A 1020
REMARK 465 SER A 1021
REMARK 465 THR A 1022
REMARK 465 PRO A 1023
REMARK 465 GLU A 1079
REMARK 465 ARG A 1080
REMARK 465 GLY A 1117
REMARK 465 SER A 1118
REMARK 465 GLY A 1119
REMARK 465 MET A 1120
REMARK 465 GLY C 37
REMARK 465 SER C 38
REMARK 465 MET C 39
REMARK 465 GLU C 40
REMARK 465 ALA C 41
REMARK 465 LYS C 42
REMARK 465 LYS C 43
REMARK 465 PRO C 44
REMARK 465 ASN C 45
REMARK 465 ILE C 46
REMARK 465 ASN C 127
REMARK 465 VAL C 128
REMARK 465 GLN C 129
REMARK 465 GLU C 130
REMARK 465 ARG C 131
REMARK 465 GLU C 132
REMARK 465 LYS C 211
REMARK 465 PRO C 212
REMARK 465 VAL C 213
REMARK 465 SER C 214
REMARK 465 ARG C 215
REMARK 465 GLU C 216
REMARK 465 ASP C 217
REMARK 465 GLN C 218
REMARK 465 CYS C 219
REMARK 465 GLU C 266
REMARK 465 ASN C 267
REMARK 465 LEU C 268
REMARK 465 LYS C 269
REMARK 465 THR C 429
REMARK 465 GLU C 430
REMARK 465 ASP C 431
REMARK 465 GLU C 432
REMARK 465 ILE C 433
REMARK 465 SER C 434
REMARK 465 PRO C 435
REMARK 465 ASP C 436
REMARK 465 LYS C 437
REMARK 465 VAL C 438
REMARK 465 ILE C 439
REMARK 465 LEU C 440
REMARK 465 CYS C 441
REMARK 465 LEU C 442
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 GLU A 27 CG CD OE1 OE2
REMARK 470 GLU A 47 CG CD OE1 OE2
REMARK 470 SER A 94 OG
REMARK 470 GLU A 96 CG CD OE1 OE2
REMARK 470 ARG A 111 CG CD NE CZ NH1 NH2
REMARK 470 ILE A 112 CG1 CG2 CD1
REMARK 470 ARG A 114 CG CD NE CZ NH1 NH2
REMARK 470 ASP A 148 CG OD1 OD2
REMARK 470 LYS A 150 CG CD CE NZ
REMARK 470 LYS A 153 CG CD CE NZ
REMARK 470 ARG A 158 CG CD NE CZ NH1 NH2
REMARK 470 GLN A 174 CG CD OE1 NE2
REMARK 470 GLN A 186 CG CD OE1 NE2
REMARK 470 ASN A 211 CG OD1 ND2
REMARK 470 LYS A 254 CG CD CE NZ
REMARK 470 ARG A 301 CG CD NE CZ NH1 NH2
REMARK 470 ASN A 319 CG OD1 ND2
REMARK 470 VAL A 338 CG1 CG2
REMARK 470 ASP A 339 CG OD1 OD2
REMARK 470 SER A 340 OG
REMARK 470 ASN A 341 CG OD1 ND2
REMARK 470 GLU A 342 CG CD OE1 OE2
REMARK 470 ARG A 369 CG CD NE CZ NH1 NH2
REMARK 470 ARG A 391 CG CD NE CZ NH1 NH2
REMARK 470 SER A 415 OG
REMARK 470 ARG A 419 CG CD NE CZ NH1 NH2
REMARK 470 GLU A 447 CG CD OE1 OE2
REMARK 470 GLN A 494 CG CD OE1 NE2
REMARK 470 GLU A 535 CG CD OE1 OE2
REMARK 470 HIS A 536 CG ND1 CD2 CE1 NE2
REMARK 470 GLU A 537 CG CD OE1 OE2
REMARK 470 LEU A 552 CG CD1 CD2
REMARK 470 ASP A 563 CG OD1 OD2
REMARK 470 LYS A 570 CG CD CE NZ
REMARK 470 LEU A 571 CG CD1 CD2
REMARK 470 PHE A 574 CG CD1 CD2 CE1 CE2 CZ
REMARK 470 GLU A 575 CG CD OE1 OE2
REMARK 470 LEU A 576 CG CD1 CD2
REMARK 470 LEU A 577 CG CD1 CD2
REMARK 470 HIS A 578 CG ND1 CD2 CE1 NE2
REMARK 470 LYS A 579 CG CD CE NZ
REMARK 470 ARG A 589 CG CD NE CZ NH1 NH2
REMARK 470 SER A 590 OG
REMARK 470 GLU A 619 CG CD OE1 OE2
REMARK 470 THR A 620 OG1 CG2
REMARK 470 LEU A 622 CG CD1 CD2
REMARK 470 LEU A 623 CG CD1 CD2
REMARK 470 LYS A 627 CG CD CE NZ
REMARK 470 GLN A 634 CG CD OE1 NE2
REMARK 470 SER A 643 OG
REMARK 470 LEU A 644 CG CD1 CD2
REMARK 470 SER A 645 OG
REMARK 470 ARG A 655 CG CD NE CZ NH1 NH2
REMARK 470 LYS A 665 CG CD CE NZ
REMARK 470 SER A 669 OG
REMARK 470 LYS A 674 CG CD CE NZ
REMARK 470 THR A 703 OG1 CG2
REMARK 470 GLU A 706 CG CD OE1 OE2
REMARK 470 ILE A 707 CG1 CG2 CD1
REMARK 470 LYS A 709 CG CD CE NZ
REMARK 470 GLN A 743 CG CD OE1 NE2
REMARK 470 ASP A 744 CG OD1 OD2
REMARK 470 SER A 762 OG
REMARK 470 LYS A 769 CG CD CE NZ
REMARK 470 GLU A 784 CG CD OE1 OE2
REMARK 470 GLN A 809 CG CD OE1 NE2
REMARK 470 ASP A 855 CG OD1 OD2
REMARK 470 LYS A 857 CG CD CE NZ
REMARK 470 LYS A 867 CG CD CE NZ
REMARK 470 GLU A 896 CG CD OE1 OE2
REMARK 470 LYS A1081 CG CD CE NZ
REMARK 470 GLN A1113 CG CD OE1 NE2
REMARK 470 LYS A1121 CG CD CE NZ
REMARK 470 GLU A1123 CG CD OE1 OE2
REMARK 470 LEU C 53 CG CD1 CD2
REMARK 470 ASP C 63 CG OD1 OD2
REMARK 470 GLU C 65 CG CD OE1 OE2
REMARK 470 HIS C 68 CG ND1 CD2 CE1 NE2
REMARK 470 LYS C 116 CG CD CE NZ
REMARK 470 SER C 126 OG
REMARK 470 GLU C 146 CG CD OE1 OE2
REMARK 470 GLN C 173 CG CD OE1 NE2
REMARK 470 ASP C 175 CG OD1 OD2
REMARK 470 LYS C 226 CG CD CE NZ
REMARK 470 LYS C 229 CG CD CE NZ
REMARK 470 ARG C 230 CG CD NE CZ NH1 NH2
REMARK 470 ASP C 270 CG OD1 OD2
REMARK 470 ASP C 271 CG OD1 OD2
REMARK 470 LYS C 317 CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OG SER A 530 O PRO A 572 2.13
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 PRO A 358 C - N - CD ANGL. DEV. = 16.1 DEGREES
REMARK 500 ARG A 388 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES
REMARK 500 PRO A 483 CA - N - CD ANGL. DEV. = -11.7 DEGREES
REMARK 500 CYS C 391 CA - CB - SG ANGL. DEV. = 7.3 DEGREES
REMARK 500 PRO C 411 C - N - CD ANGL. DEV. = 15.6 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASN A 36 -92.82 64.63
REMARK 500 VAL A 52 -53.17 -139.81
REMARK 500 LEU A 145 49.91 -101.77
REMARK 500 ILE A 165 -72.91 -88.12
REMARK 500 SER A 217 -39.21 -132.55
REMARK 500 PHE A 226 -68.04 -102.46
REMARK 500 LYS A 254 91.34 -66.15
REMARK 500 GLN A 255 -58.50 -178.78
REMARK 500 ASN A 267 -49.41 -28.60
REMARK 500 LEU A 297 94.07 -60.97
REMARK 500 ASP A 318 157.05 81.50
REMARK 500 ASP A 339 74.56 -59.50
REMARK 500 LYS A 383 -35.21 110.38
REMARK 500 GLN A 494 30.08 -99.51
REMARK 500 SER A 502 119.52 -163.71
REMARK 500 SER A 506 23.48 -147.47
REMARK 500 GLN A 507 102.34 -162.79
REMARK 500 GLN A 524 30.02 39.00
REMARK 500 ILE A 543 32.02 -149.86
REMARK 500 PHE A 574 44.80 74.29
REMARK 500 LYS A 579 80.28 -150.95
REMARK 500 GLU A 597 -106.07 64.39
REMARK 500 ASP A 625 77.60 50.47
REMARK 500 LEU A 644 74.27 66.25
REMARK 500 ASN A 663 63.20 37.35
REMARK 500 ARG A 722 -43.96 -135.54
REMARK 500 LEU A 761 -76.97 -51.26
REMARK 500 SER A 768 176.43 -54.32
REMARK 500 ASN A 810 -3.23 68.99
REMARK 500 SER A 854 -55.14 -128.02
REMARK 500 LYS A 864 108.68 -169.28
REMARK 500 ASN A 885 -123.59 46.32
REMARK 500 LYS A 897 42.01 76.30
REMARK 500 GLU A 902 -75.19 -96.86
REMARK 500 PRO A 951 104.07 -44.18
REMARK 500 GLU A 988 31.82 -95.04
REMARK 500 ARG A 989 60.26 -105.28
REMARK 500 VAL A1065 -73.25 -54.85
REMARK 500 ASP A1090 88.77 -55.05
REMARK 500 ALA A1110 106.40 -56.67
REMARK 500 ASN C 48 55.75 -150.82
REMARK 500 ASP C 50 98.03 -68.92
REMARK 500 HIS C 68 92.24 -60.50
REMARK 500 ARG C 70 -3.55 -160.36
REMARK 500 ASP C 117 -24.74 80.84
REMARK 500 ARG C 118 -6.05 68.23
REMARK 500 ARG C 162 -67.48 -130.90
REMARK 500 LEU C 170 68.98 -154.98
REMARK 500 GLN C 198 129.38 -34.42
REMARK 500 ASP C 271 -170.32 -175.65
REMARK 500
REMARK 500 THIS ENTRY HAS 55 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 ZN C 502 ZN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 CYS C 323 SG
REMARK 620 2 CYS C 326 SG 129.3
REMARK 620 3 CYS C 394 SG 90.6 80.4
REMARK 620 N 1 2
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 8W7 C 501
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 502
DBREF 5V3O A 1 1140 UNP Q16531 DDB1_HUMAN 1 1140
DBREF 5V3O C 40 442 UNP Q96SW2 CRBN_HUMAN 40 442
SEQADV 5V3O GLY C 37 UNP Q96SW2 EXPRESSION TAG
SEQADV 5V3O SER C 38 UNP Q96SW2 EXPRESSION TAG
SEQADV 5V3O MET C 39 UNP Q96SW2 EXPRESSION TAG
SEQRES 1 A 1140 MET SER TYR ASN TYR VAL VAL THR ALA GLN LYS PRO THR
SEQRES 2 A 1140 ALA VAL ASN GLY CYS VAL THR GLY HIS PHE THR SER ALA
SEQRES 3 A 1140 GLU ASP LEU ASN LEU LEU ILE ALA LYS ASN THR ARG LEU
SEQRES 4 A 1140 GLU ILE TYR VAL VAL THR ALA GLU GLY LEU ARG PRO VAL
SEQRES 5 A 1140 LYS GLU VAL GLY MET TYR GLY LYS ILE ALA VAL MET GLU
SEQRES 6 A 1140 LEU PHE ARG PRO LYS GLY GLU SER LYS ASP LEU LEU PHE
SEQRES 7 A 1140 ILE LEU THR ALA LYS TYR ASN ALA CYS ILE LEU GLU TYR
SEQRES 8 A 1140 LYS GLN SER GLY GLU SER ILE ASP ILE ILE THR ARG ALA
SEQRES 9 A 1140 HIS GLY ASN VAL GLN ASP ARG ILE GLY ARG PRO SER GLU
SEQRES 10 A 1140 THR GLY ILE ILE GLY ILE ILE ASP PRO GLU CYS ARG MET
SEQRES 11 A 1140 ILE GLY LEU ARG LEU TYR ASP GLY LEU PHE LYS VAL ILE
SEQRES 12 A 1140 PRO LEU ASP ARG ASP ASN LYS GLU LEU LYS ALA PHE ASN
SEQRES 13 A 1140 ILE ARG LEU GLU GLU LEU HIS VAL ILE ASP VAL LYS PHE
SEQRES 14 A 1140 LEU TYR GLY CYS GLN ALA PRO THR ILE CYS PHE VAL TYR
SEQRES 15 A 1140 GLN ASP PRO GLN GLY ARG HIS VAL LYS THR TYR GLU VAL
SEQRES 16 A 1140 SER LEU ARG GLU LYS GLU PHE ASN LYS GLY PRO TRP LYS
SEQRES 17 A 1140 GLN GLU ASN VAL GLU ALA GLU ALA SER MET VAL ILE ALA
SEQRES 18 A 1140 VAL PRO GLU PRO PHE GLY GLY ALA ILE ILE ILE GLY GLN
SEQRES 19 A 1140 GLU SER ILE THR TYR HIS ASN GLY ASP LYS TYR LEU ALA
SEQRES 20 A 1140 ILE ALA PRO PRO ILE ILE LYS GLN SER THR ILE VAL CYS
SEQRES 21 A 1140 HIS ASN ARG VAL ASP PRO ASN GLY SER ARG TYR LEU LEU
SEQRES 22 A 1140 GLY ASP MET GLU GLY ARG LEU PHE MET LEU LEU LEU GLU
SEQRES 23 A 1140 LYS GLU GLU GLN MET ASP GLY THR VAL THR LEU LYS ASP
SEQRES 24 A 1140 LEU ARG VAL GLU LEU LEU GLY GLU THR SER ILE ALA GLU
SEQRES 25 A 1140 CYS LEU THR TYR LEU ASP ASN GLY VAL VAL PHE VAL GLY
SEQRES 26 A 1140 SER ARG LEU GLY ASP SER GLN LEU VAL LYS LEU ASN VAL
SEQRES 27 A 1140 ASP SER ASN GLU GLN GLY SER TYR VAL VAL ALA MET GLU
SEQRES 28 A 1140 THR PHE THR ASN LEU GLY PRO ILE VAL ASP MET CYS VAL
SEQRES 29 A 1140 VAL ASP LEU GLU ARG GLN GLY GLN GLY GLN LEU VAL THR
SEQRES 30 A 1140 CYS SER GLY ALA PHE LYS GLU GLY SER LEU ARG ILE ILE
SEQRES 31 A 1140 ARG ASN GLY ILE GLY ILE HIS GLU HIS ALA SER ILE ASP
SEQRES 32 A 1140 LEU PRO GLY ILE LYS GLY LEU TRP PRO LEU ARG SER ASP
SEQRES 33 A 1140 PRO ASN ARG GLU THR ASP ASP THR LEU VAL LEU SER PHE
SEQRES 34 A 1140 VAL GLY GLN THR ARG VAL LEU MET LEU ASN GLY GLU GLU
SEQRES 35 A 1140 VAL GLU GLU THR GLU LEU MET GLY PHE VAL ASP ASP GLN
SEQRES 36 A 1140 GLN THR PHE PHE CYS GLY ASN VAL ALA HIS GLN GLN LEU
SEQRES 37 A 1140 ILE GLN ILE THR SER ALA SER VAL ARG LEU VAL SER GLN
SEQRES 38 A 1140 GLU PRO LYS ALA LEU VAL SER GLU TRP LYS GLU PRO GLN
SEQRES 39 A 1140 ALA LYS ASN ILE SER VAL ALA SER CYS ASN SER SER GLN
SEQRES 40 A 1140 VAL VAL VAL ALA VAL GLY ARG ALA LEU TYR TYR LEU GLN
SEQRES 41 A 1140 ILE HIS PRO GLN GLU LEU ARG GLN ILE SER HIS THR GLU
SEQRES 42 A 1140 MET GLU HIS GLU VAL ALA CYS LEU ASP ILE THR PRO LEU
SEQRES 43 A 1140 GLY ASP SER ASN GLY LEU SER PRO LEU CYS ALA ILE GLY
SEQRES 44 A 1140 LEU TRP THR ASP ILE SER ALA ARG ILE LEU LYS LEU PRO
SEQRES 45 A 1140 SER PHE GLU LEU LEU HIS LYS GLU MET LEU GLY GLY GLU
SEQRES 46 A 1140 ILE ILE PRO ARG SER ILE LEU MET THR THR PHE GLU SER
SEQRES 47 A 1140 SER HIS TYR LEU LEU CYS ALA LEU GLY ASP GLY ALA LEU
SEQRES 48 A 1140 PHE TYR PHE GLY LEU ASN ILE GLU THR GLY LEU LEU SER
SEQRES 49 A 1140 ASP ARG LYS LYS VAL THR LEU GLY THR GLN PRO THR VAL
SEQRES 50 A 1140 LEU ARG THR PHE ARG SER LEU SER THR THR ASN VAL PHE
SEQRES 51 A 1140 ALA CYS SER ASP ARG PRO THR VAL ILE TYR SER SER ASN
SEQRES 52 A 1140 HIS LYS LEU VAL PHE SER ASN VAL ASN LEU LYS GLU VAL
SEQRES 53 A 1140 ASN TYR MET CYS PRO LEU ASN SER ASP GLY TYR PRO ASP
SEQRES 54 A 1140 SER LEU ALA LEU ALA ASN ASN SER THR LEU THR ILE GLY
SEQRES 55 A 1140 THR ILE ASP GLU ILE GLN LYS LEU HIS ILE ARG THR VAL
SEQRES 56 A 1140 PRO LEU TYR GLU SER PRO ARG LYS ILE CYS TYR GLN GLU
SEQRES 57 A 1140 VAL SER GLN CYS PHE GLY VAL LEU SER SER ARG ILE GLU
SEQRES 58 A 1140 VAL GLN ASP THR SER GLY GLY THR THR ALA LEU ARG PRO
SEQRES 59 A 1140 SER ALA SER THR GLN ALA LEU SER SER SER VAL SER SER
SEQRES 60 A 1140 SER LYS LEU PHE SER SER SER THR ALA PRO HIS GLU THR
SEQRES 61 A 1140 SER PHE GLY GLU GLU VAL GLU VAL HIS ASN LEU LEU ILE
SEQRES 62 A 1140 ILE ASP GLN HIS THR PHE GLU VAL LEU HIS ALA HIS GLN
SEQRES 63 A 1140 PHE LEU GLN ASN GLU TYR ALA LEU SER LEU VAL SER CYS
SEQRES 64 A 1140 LYS LEU GLY LYS ASP PRO ASN THR TYR PHE ILE VAL GLY
SEQRES 65 A 1140 THR ALA MET VAL TYR PRO GLU GLU ALA GLU PRO LYS GLN
SEQRES 66 A 1140 GLY ARG ILE VAL VAL PHE GLN TYR SER ASP GLY LYS LEU
SEQRES 67 A 1140 GLN THR VAL ALA GLU LYS GLU VAL LYS GLY ALA VAL TYR
SEQRES 68 A 1140 SER MET VAL GLU PHE ASN GLY LYS LEU LEU ALA SER ILE
SEQRES 69 A 1140 ASN SER THR VAL ARG LEU TYR GLU TRP THR THR GLU LYS
SEQRES 70 A 1140 GLU LEU ARG THR GLU CYS ASN HIS TYR ASN ASN ILE MET
SEQRES 71 A 1140 ALA LEU TYR LEU LYS THR LYS GLY ASP PHE ILE LEU VAL
SEQRES 72 A 1140 GLY ASP LEU MET ARG SER VAL LEU LEU LEU ALA TYR LYS
SEQRES 73 A 1140 PRO MET GLU GLY ASN PHE GLU GLU ILE ALA ARG ASP PHE
SEQRES 74 A 1140 ASN PRO ASN TRP MET SER ALA VAL GLU ILE LEU ASP ASP
SEQRES 75 A 1140 ASP ASN PHE LEU GLY ALA GLU ASN ALA PHE ASN LEU PHE
SEQRES 76 A 1140 VAL CYS GLN LYS ASP SER ALA ALA THR THR ASP GLU GLU
SEQRES 77 A 1140 ARG GLN HIS LEU GLN GLU VAL GLY LEU PHE HIS LEU GLY
SEQRES 78 A 1140 GLU PHE VAL ASN VAL PHE CYS HIS GLY SER LEU VAL MET
SEQRES 79 A 1140 GLN ASN LEU GLY GLU THR SER THR PRO THR GLN GLY SER
SEQRES 80 A 1140 VAL LEU PHE GLY THR VAL ASN GLY MET ILE GLY LEU VAL
SEQRES 81 A 1140 THR SER LEU SER GLU SER TRP TYR ASN LEU LEU LEU ASP
SEQRES 82 A 1140 MET GLN ASN ARG LEU ASN LYS VAL ILE LYS SER VAL GLY
SEQRES 83 A 1140 LYS ILE GLU HIS SER PHE TRP ARG SER PHE HIS THR GLU
SEQRES 84 A 1140 ARG LYS THR GLU PRO ALA THR GLY PHE ILE ASP GLY ASP
SEQRES 85 A 1140 LEU ILE GLU SER PHE LEU ASP ILE SER ARG PRO LYS MET
SEQRES 86 A 1140 GLN GLU VAL VAL ALA ASN LEU GLN TYR ASP ASP GLY SER
SEQRES 87 A 1140 GLY MET LYS ARG GLU ALA THR ALA ASP ASP LEU ILE LYS
SEQRES 88 A 1140 VAL VAL GLU GLU LEU THR ARG ILE HIS
SEQRES 1 C 406 GLY SER MET GLU ALA LYS LYS PRO ASN ILE ILE ASN PHE
SEQRES 2 C 406 ASP THR SER LEU PRO THR SER HIS THR TYR LEU GLY ALA
SEQRES 3 C 406 ASP MET GLU GLU PHE HIS GLY ARG THR LEU HIS ASP ASP
SEQRES 4 C 406 ASP SER CYS GLN VAL ILE PRO VAL LEU PRO GLN VAL MET
SEQRES 5 C 406 MET ILE LEU ILE PRO GLY GLN THR LEU PRO LEU GLN LEU
SEQRES 6 C 406 PHE HIS PRO GLN GLU VAL SER MET VAL ARG ASN LEU ILE
SEQRES 7 C 406 GLN LYS ASP ARG THR PHE ALA VAL LEU ALA TYR SER ASN
SEQRES 8 C 406 VAL GLN GLU ARG GLU ALA GLN PHE GLY THR THR ALA GLU
SEQRES 9 C 406 ILE TYR ALA TYR ARG GLU GLU GLN ASP PHE GLY ILE GLU
SEQRES 10 C 406 ILE VAL LYS VAL LYS ALA ILE GLY ARG GLN ARG PHE LYS
SEQRES 11 C 406 VAL LEU GLU LEU ARG THR GLN SER ASP GLY ILE GLN GLN
SEQRES 12 C 406 ALA LYS VAL GLN ILE LEU PRO GLU CYS VAL LEU PRO SER
SEQRES 13 C 406 THR MET SER ALA VAL GLN LEU GLU SER LEU ASN LYS CYS
SEQRES 14 C 406 GLN ILE PHE PRO SER LYS PRO VAL SER ARG GLU ASP GLN
SEQRES 15 C 406 CYS SER TYR LYS TRP TRP GLN LYS TYR GLN LYS ARG LYS
SEQRES 16 C 406 PHE HIS CYS ALA ASN LEU THR SER TRP PRO ARG TRP LEU
SEQRES 17 C 406 TYR SER LEU TYR ASP ALA GLU THR LEU MET ASP ARG ILE
SEQRES 18 C 406 LYS LYS GLN LEU ARG GLU TRP ASP GLU ASN LEU LYS ASP
SEQRES 19 C 406 ASP SER LEU PRO SER ASN PRO ILE ASP PHE SER TYR ARG
SEQRES 20 C 406 VAL ALA ALA CYS LEU PRO ILE ASP ASP VAL LEU ARG ILE
SEQRES 21 C 406 GLN LEU LEU LYS ILE GLY SER ALA ILE GLN ARG LEU ARG
SEQRES 22 C 406 CYS GLU LEU ASP ILE MET ASN LYS CYS THR SER LEU CYS
SEQRES 23 C 406 CYS LYS GLN CYS GLN GLU THR GLU ILE THR THR LYS ASN
SEQRES 24 C 406 GLU ILE PHE SER LEU SER LEU CYS GLY PRO MET ALA ALA
SEQRES 25 C 406 TYR VAL ASN PRO HIS GLY TYR VAL HIS GLU THR LEU THR
SEQRES 26 C 406 VAL TYR LYS ALA CYS ASN LEU ASN LEU ILE GLY ARG PRO
SEQRES 27 C 406 SER THR GLU HIS SER TRP PHE PRO GLY TYR ALA TRP THR
SEQRES 28 C 406 VAL ALA GLN CYS LYS ILE CYS ALA SER HIS ILE GLY TRP
SEQRES 29 C 406 LYS PHE THR ALA THR LYS LYS ASP MET SER PRO GLN LYS
SEQRES 30 C 406 PHE TRP GLY LEU THR ARG SER ALA LEU LEU PRO THR ILE
SEQRES 31 C 406 PRO ASP THR GLU ASP GLU ILE SER PRO ASP LYS VAL ILE
SEQRES 32 C 406 LEU CYS LEU
HET 8W7 C 501 33
HET ZN C 502 1
HETNAM 8W7 (3S)-3-[4-({4-[(MORPHOLIN-4-YL)METHYL]PHENYL}METHOXY)-
HETNAM 2 8W7 1-OXO-1,3-DIHYDRO-2H-ISOINDOL-2-YL]PIPERIDINE-2,6-
HETNAM 3 8W7 DIONE
HETNAM ZN ZINC ION
FORMUL 3 8W7 C25 H27 N3 O5
FORMUL 4 ZN ZN 2+
HELIX 1 AA1 SER A 755 GLN A 759 5 5
HELIX 2 AA2 SER A 1044 ILE A 1062 1 19
HELIX 3 AA3 GLU A 1069 SER A 1075 1 7
HELIX 4 AA4 GLY A 1091 PHE A 1097 1 7
HELIX 5 AA5 LEU A 1098 ILE A 1100 5 3
HELIX 6 AA6 SER A 1101 VAL A 1109 1 9
HELIX 7 AA7 THR A 1125 ARG A 1138 1 14
HELIX 8 AA8 LEU C 53 GLY C 61 5 9
HELIX 9 AA9 HIS C 103 LYS C 116 1 14
HELIX 10 AB1 GLN C 148 ILE C 152 5 5
HELIX 11 AB2 LEU C 202 GLN C 206 5 5
HELIX 12 AB3 TYR C 221 PHE C 232 1 12
HELIX 13 AB4 HIS C 233 THR C 238 5 6
HELIX 14 AB5 PRO C 241 LEU C 247 1 7
HELIX 15 AB6 ASP C 249 ASP C 265 1 17
HELIX 16 AB7 ASN C 276 LEU C 288 1 13
HELIX 17 AB8 ASP C 291 ILE C 301 1 11
HELIX 18 AB9 SER C 303 CYS C 318 1 16
HELIX 19 AC1 ASN C 335 ILE C 337 5 3
SHEET 1 AA1 5 VAL A1004 HIS A1009 0
SHEET 2 AA1 5 GLN A1025 THR A1032 -1 O LEU A1029 N CYS A1008
SHEET 3 AA1 5 ILE A1037 SER A1042 -1 O GLY A1038 N PHE A1030
SHEET 4 AA1 5 ASN A 4 GLN A 10 -1 N TYR A 5 O THR A1041
SHEET 5 AA1 5 PHE A1088 ASP A1090 1 O ILE A1089 N ASN A 4
SHEET 1 AA2 4 GLY A 17 GLY A 21 0
SHEET 2 AA2 4 ASN A 30 LYS A 35 -1 O ASN A 30 N GLY A 21
SHEET 3 AA2 4 ARG A 38 VAL A 44 -1 O TYR A 42 N LEU A 31
SHEET 4 AA2 4 LEU A 49 GLY A 56 -1 O VAL A 55 N LEU A 39
SHEET 1 AA3 4 ILE A 61 PHE A 67 0
SHEET 2 AA3 4 LEU A 76 THR A 81 -1 O PHE A 78 N GLU A 65
SHEET 3 AA3 4 ASN A 85 SER A 94 -1 O LEU A 89 N LEU A 77
SHEET 4 AA3 4 SER A 97 ASN A 107 -1 O ASP A 99 N LYS A 92
SHEET 1 AA4 3 ILE A 121 ILE A 124 0
SHEET 2 AA4 3 MET A 130 ARG A 134 -1 O GLY A 132 N ILE A 123
SHEET 3 AA4 3 LYS A 141 PRO A 144 -1 O LYS A 141 N LEU A 133
SHEET 1 AA5 4 VAL A 164 PHE A 169 0
SHEET 2 AA5 4 THR A 177 GLN A 183 -1 O VAL A 181 N ILE A 165
SHEET 3 AA5 4 ARG A 188 SER A 196 -1 O HIS A 189 N TYR A 182
SHEET 4 AA5 4 GLU A 201 LYS A 208 -1 O ASN A 203 N GLU A 194
SHEET 1 AA6 4 MET A 218 ALA A 221 0
SHEET 2 AA6 4 ALA A 229 ILE A 232 -1 O ILE A 230 N ILE A 220
SHEET 3 AA6 4 ILE A 237 HIS A 240 -1 O THR A 238 N ILE A 231
SHEET 4 AA6 4 TYR A 245 ILE A 248 -1 O ILE A 248 N ILE A 237
SHEET 1 AA7 4 ILE A 258 ARG A 263 0
SHEET 2 AA7 4 ARG A 270 ASP A 275 -1 O GLY A 274 N VAL A 259
SHEET 3 AA7 4 ARG A 279 GLU A 286 -1 O PHE A 281 N LEU A 273
SHEET 4 AA7 4 ASP A 299 GLU A 307 -1 O ARG A 301 N LEU A 284
SHEET 1 AA8 4 ALA A 311 TYR A 316 0
SHEET 2 AA8 4 VAL A 321 SER A 326 -1 O PHE A 323 N THR A 315
SHEET 3 AA8 4 SER A 331 LEU A 336 -1 O GLN A 332 N VAL A 324
SHEET 4 AA8 4 VAL A 347 PHE A 353 -1 O VAL A 348 N LYS A 335
SHEET 1 AA9 4 ILE A 359 VAL A 365 0
SHEET 2 AA9 4 GLN A 374 SER A 379 -1 O CYS A 378 N ASP A 361
SHEET 3 AA9 4 SER A 386 GLY A 393 -1 O SER A 386 N SER A 379
SHEET 4 AA9 4 LYS A 709 PRO A 716 -1 O ARG A 713 N ILE A 389
SHEET 1 AB1 4 ILE A 396 ASP A 403 0
SHEET 2 AB1 4 THR A 698 ILE A 704 -1 O LEU A 699 N ILE A 402
SHEET 3 AB1 4 SER A 690 ALA A 694 -1 N LEU A 693 O THR A 700
SHEET 4 AB1 4 TYR A 678 LEU A 682 -1 N CYS A 680 O ALA A 692
SHEET 1 AB2 4 GLY A 409 LEU A 413 0
SHEET 2 AB2 4 THR A 424 PHE A 429 -1 O VAL A 426 N TRP A 411
SHEET 3 AB2 4 GLN A 432 ASN A 439 -1 O GLN A 432 N PHE A 429
SHEET 4 AB2 4 GLU A 442 THR A 446 -1 O THR A 446 N VAL A 435
SHEET 1 AB3 4 THR A 457 VAL A 463 0
SHEET 2 AB3 4 GLN A 467 THR A 472 -1 O ILE A 471 N PHE A 459
SHEET 3 AB3 4 VAL A 476 SER A 480 -1 O VAL A 479 N LEU A 468
SHEET 4 AB3 4 LEU A 486 TRP A 490 -1 O VAL A 487 N LEU A 478
SHEET 1 AB4 3 GLN A 507 VAL A 508 0
SHEET 2 AB4 3 LEU A 516 HIS A 522 -1 O LEU A 519 N VAL A 508
SHEET 3 AB4 3 GLU A 525 THR A 532 -1 O GLU A 525 N HIS A 522
SHEET 1 AB5 4 VAL A 538 ASP A 542 0
SHEET 2 AB5 4 CYS A 556 LEU A 560 -1 O GLY A 559 N ALA A 539
SHEET 3 AB5 4 SER A 565 LEU A 569 -1 O ARG A 567 N ILE A 558
SHEET 4 AB5 4 HIS A 578 MET A 581 -1 O HIS A 578 N ILE A 568
SHEET 1 AB6 4 PRO A 588 THR A 594 0
SHEET 2 AB6 4 TYR A 601 LEU A 606 -1 O LEU A 603 N LEU A 592
SHEET 3 AB6 4 ALA A 610 GLY A 615 -1 O ALA A 610 N LEU A 606
SHEET 4 AB6 4 SER A 624 THR A 630 -1 O VAL A 629 N LEU A 611
SHEET 1 AB7 4 VAL A 637 ARG A 642 0
SHEET 2 AB7 4 THR A 647 CYS A 652 -1 O PHE A 650 N ARG A 639
SHEET 3 AB7 4 THR A 657 SER A 662 -1 O THR A 657 N ALA A 651
SHEET 4 AB7 4 LYS A 665 VAL A 667 -1 O VAL A 667 N TYR A 660
SHEET 1 AB8 3 SER A 720 GLN A 727 0
SHEET 2 AB8 3 CYS A 732 VAL A 742 -1 O LEU A 736 N ARG A 722
SHEET 3 AB8 3 THR A 750 ALA A 751 -1 O THR A 750 N VAL A 742
SHEET 1 AB9 5 SER A 720 GLN A 727 0
SHEET 2 AB9 5 CYS A 732 VAL A 742 -1 O LEU A 736 N ARG A 722
SHEET 3 AB9 5 GLU A 785 ASP A 795 -1 O ILE A 794 N PHE A 733
SHEET 4 AB9 5 VAL A 801 GLN A 806 -1 O LEU A 802 N ILE A 793
SHEET 5 AB9 5 SER A 764 VAL A 765 1 N SER A 764 O ALA A 804
SHEET 1 AC1 4 GLU A 811 CYS A 819 0
SHEET 2 AC1 4 TYR A 828 MET A 835 -1 O ILE A 830 N VAL A 817
SHEET 3 AC1 4 GLY A 846 TYR A 853 -1 O PHE A 851 N PHE A 829
SHEET 4 AC1 4 LEU A 858 ALA A 862 -1 O GLN A 859 N GLN A 852
SHEET 1 AC2 4 GLU A 811 CYS A 819 0
SHEET 2 AC2 4 TYR A 828 MET A 835 -1 O ILE A 830 N VAL A 817
SHEET 3 AC2 4 GLY A 846 TYR A 853 -1 O PHE A 851 N PHE A 829
SHEET 4 AC2 4 GLU A 865 VAL A 866 -1 O VAL A 866 N GLY A 846
SHEET 1 AC3 4 MET A 873 PHE A 876 0
SHEET 2 AC3 4 LYS A 879 ILE A 884 -1 O LYS A 879 N PHE A 876
SHEET 3 AC3 4 THR A 887 TRP A 893 -1 O THR A 887 N ILE A 884
SHEET 4 AC3 4 LEU A 899 TYR A 906 -1 O ARG A 900 N GLU A 892
SHEET 1 AC4 4 TYR A 913 LYS A 917 0
SHEET 2 AC4 4 PHE A 920 GLY A 924 -1 O LEU A 922 N LYS A 915
SHEET 3 AC4 4 VAL A 930 TYR A 935 -1 O LEU A 933 N ILE A 921
SHEET 4 AC4 4 PHE A 942 ASP A 948 -1 O ILE A 945 N LEU A 932
SHEET 1 AC5 4 MET A 954 ILE A 959 0
SHEET 2 AC5 4 ASN A 964 GLU A 969 -1 O LEU A 966 N GLU A 958
SHEET 3 AC5 4 ASN A 973 GLN A 978 -1 O ASN A 973 N GLU A 969
SHEET 4 AC5 4 GLN A 993 HIS A 999 -1 O GLN A 993 N GLN A 978
SHEET 1 AC6 2 GLN A1113 TYR A1114 0
SHEET 2 AC6 2 ARG A1122 GLU A1123 -1 O ARG A1122 N TYR A1114
SHEET 1 AC7 4 GLU C 65 GLU C 66 0
SHEET 2 AC7 4 PHE C 135 GLU C 147 -1 O TYR C 144 N GLU C 65
SHEET 3 AC7 4 ILE C 154 THR C 172 -1 O GLN C 163 N THR C 138
SHEET 4 AC7 4 THR C 96 LEU C 101 -1 N LEU C 97 O ALA C 159
SHEET 1 AC8 5 CYS C 78 PRO C 82 0
SHEET 2 AC8 5 GLN C 178 ILE C 184 -1 O VAL C 182 N GLN C 79
SHEET 3 AC8 5 ILE C 154 THR C 172 -1 N LYS C 166 O GLN C 183
SHEET 4 AC8 5 PHE C 135 GLU C 147 -1 N THR C 138 O GLN C 163
SHEET 5 AC8 5 THR C 119 ALA C 124 -1 N PHE C 120 O ALA C 139
SHEET 1 AC9 3 GLU C 330 THR C 333 0
SHEET 2 AC9 3 SER C 320 CYS C 323 -1 N LEU C 321 O THR C 332
SHEET 3 AC9 3 LEU C 422 THR C 425 -1 O LEU C 423 N CYS C 322
SHEET 1 AD1 6 MET C 346 VAL C 350 0
SHEET 2 AD1 6 VAL C 356 VAL C 362 -1 O HIS C 357 N TYR C 349
SHEET 3 AD1 6 LYS C 413 THR C 418 -1 O TRP C 415 N VAL C 362
SHEET 4 AD1 6 HIS C 397 ALA C 404 -1 N PHE C 402 O PHE C 414
SHEET 5 AD1 6 TYR C 384 CYS C 391 -1 N ALA C 385 O THR C 403
SHEET 6 AD1 6 LEU C 368 SER C 375 -1 N SER C 375 O TRP C 386
SSBOND 1 CYS A 18 CYS A 313 1555 1555 2.14
LINK SG CYS C 323 ZN ZN C 502 1555 1555 2.18
LINK SG CYS C 326 ZN ZN C 502 1555 1555 2.29
LINK SG CYS C 394 ZN ZN C 502 1555 1555 2.43
CISPEP 1 GLY A 357 PRO A 358 0 2.64
CISPEP 2 SER C 410 PRO C 411 0 -1.81
SITE 1 AC1 9 ASN C 351 PRO C 352 GLU C 377 HIS C 378
SITE 2 AC1 9 SER C 379 TRP C 380 TRP C 386 TRP C 400
SITE 3 AC1 9 PHE C 402
SITE 1 AC2 4 CYS C 323 CYS C 326 CYS C 391 CYS C 394
CRYST1 111.029 126.886 172.487 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009007 0.000000 0.000000 0.00000
SCALE2 0.000000 0.007881 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005798 0.00000