data_5V4K # _entry.id 5V4K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.357 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5V4K pdb_00005v4k 10.2210/pdb5v4k/pdb WWPDB D_1000226864 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5V4K _pdbx_database_status.recvd_initial_deposition_date 2017-03-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Qiu, Y.' 1 ? 'Zheng, Y.' 2 ? 'Schulman, B.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Protein Sci.' _citation.journal_id_ASTM PRCIEI _citation.journal_id_CSD 0795 _citation.journal_id_ISSN 1469-896X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 1674 _citation.page_last 1680 _citation.title ;Insights into links between autophagy and the ubiquitin system from the structure of LC3B bound to the LIR motif from the E3 ligase NEDD4. ; _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/pro.3186 _citation.pdbx_database_id_PubMed 28470758 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qiu, Y.' 1 ? primary 'Zheng, Y.' 2 ? primary 'Wu, K.P.' 3 ? primary 'Schulman, B.A.' 4 ? # _cell.entry_id 5V4K _cell.length_a 69.570 _cell.length_b 69.570 _cell.length_c 119.620 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V4K _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Microtubule-associated proteins 1A/1B light chain 3B,Microtubule-associated proteins 1A/1B light chain 3B,Microtubule-associated proteins 1A/1B light chain 3B ; 15466.554 2 ? ? 'UNP residues 2-119,UNP residues 2-119,UNP residues 2-119,UNP residues 2-119' ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 135 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Autophagy-related protein LC3 B,Autophagy-related ubiquitin-like modifier LC3 B,MAP1 light chain 3-like protein 2,MAP1A/MAP1B light chain 3 B,MAP1A/MAP1B LC3 B,Microtubule-associated protein 1 light chain 3 beta,Autophagy-related protein LC3 B,Autophagy-related ubiquitin-like modifier LC3 B,MAP1 light chain 3-like protein 2,MAP1A/MAP1B light chain 3 B,MAP1A/MAP1B LC3 B,Microtubule-associated protein 1 light chain 3 beta,Autophagy-related protein LC3 B,Autophagy-related ubiquitin-like modifier LC3 B,MAP1 light chain 3-like protein 2,MAP1A/MAP1B light chain 3 B,MAP1A/MAP1B LC3 B,Microtubule-associated protein 1 light chain 3 beta ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSQESSENWEIIGSPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKII RRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETF ; _entity_poly.pdbx_seq_one_letter_code_can ;GSQESSENWEIIGSPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKII RRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLN n 1 4 GLU n 1 5 SER n 1 6 SER n 1 7 GLU n 1 8 ASN n 1 9 TRP n 1 10 GLU n 1 11 ILE n 1 12 ILE n 1 13 GLY n 1 14 SER n 1 15 PRO n 1 16 SER n 1 17 GLU n 1 18 LYS n 1 19 THR n 1 20 PHE n 1 21 LYS n 1 22 GLN n 1 23 ARG n 1 24 ARG n 1 25 THR n 1 26 PHE n 1 27 GLU n 1 28 GLN n 1 29 ARG n 1 30 VAL n 1 31 GLU n 1 32 ASP n 1 33 VAL n 1 34 ARG n 1 35 LEU n 1 36 ILE n 1 37 ARG n 1 38 GLU n 1 39 GLN n 1 40 HIS n 1 41 PRO n 1 42 THR n 1 43 LYS n 1 44 ILE n 1 45 PRO n 1 46 VAL n 1 47 ILE n 1 48 ILE n 1 49 GLU n 1 50 ARG n 1 51 TYR n 1 52 LYS n 1 53 GLY n 1 54 GLU n 1 55 LYS n 1 56 GLN n 1 57 LEU n 1 58 PRO n 1 59 VAL n 1 60 LEU n 1 61 ASP n 1 62 LYS n 1 63 THR n 1 64 LYS n 1 65 PHE n 1 66 LEU n 1 67 VAL n 1 68 PRO n 1 69 ASP n 1 70 HIS n 1 71 VAL n 1 72 ASN n 1 73 MET n 1 74 SER n 1 75 GLU n 1 76 LEU n 1 77 ILE n 1 78 LYS n 1 79 ILE n 1 80 ILE n 1 81 ARG n 1 82 ARG n 1 83 ARG n 1 84 LEU n 1 85 GLN n 1 86 LEU n 1 87 ASN n 1 88 ALA n 1 89 ASN n 1 90 GLN n 1 91 ALA n 1 92 PHE n 1 93 PHE n 1 94 LEU n 1 95 LEU n 1 96 VAL n 1 97 ASN n 1 98 GLY n 1 99 HIS n 1 100 SER n 1 101 MET n 1 102 VAL n 1 103 SER n 1 104 VAL n 1 105 SER n 1 106 THR n 1 107 PRO n 1 108 ILE n 1 109 SER n 1 110 GLU n 1 111 VAL n 1 112 TYR n 1 113 GLU n 1 114 SER n 1 115 GLU n 1 116 LYS n 1 117 ASP n 1 118 GLU n 1 119 ASP n 1 120 GLY n 1 121 PHE n 1 122 LEU n 1 123 TYR n 1 124 MET n 1 125 VAL n 1 126 TYR n 1 127 ALA n 1 128 SER n 1 129 GLN n 1 130 GLU n 1 131 THR n 1 132 PHE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 14 Human ? 'MAP1LC3B, MAP1ALC3' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 15 132 Human ? 'MAP1LC3B, MAP1ALC3' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5V4K 5V4K ? 1 ? 1 2 UNP MLP3B_HUMAN Q9GZQ8 ? 1 ;PSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFL LVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETF ; 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5V4K A 1 ? 14 ? 5V4K 258 ? 271 ? 258 271 2 2 5V4K A 15 ? 132 ? Q9GZQ8 2 ? 119 ? 1002 1119 3 1 5V4K B 1 ? 14 ? 5V4K 258 ? 271 ? 258 271 4 2 5V4K B 15 ? 132 ? Q9GZQ8 2 ? 119 ? 1002 1119 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5V4K _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M Sodium Acetate pH 5.0, 1.2M Ammonium Sulfate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-06-07 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5V4K _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.10 _reflns.d_resolution_low 45.5 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17887 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5V4K _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17829 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.496 _refine.ls_d_res_high 2.099 _refine.ls_percent_reflns_obs 99.90 _refine.ls_R_factor_obs 0.1845 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1820 _refine.ls_R_factor_R_free 0.2328 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.09 _refine.ls_number_reflns_R_free 907 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.24 _refine.pdbx_overall_phase_error 23.20 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1996 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 2153 _refine_hist.d_res_high 2.099 _refine_hist.d_res_low 45.496 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 2060 'X-RAY DIFFRACTION' ? f_angle_d 0.749 ? ? 2789 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.647 ? ? 1259 'X-RAY DIFFRACTION' ? f_chiral_restr 0.051 ? ? 315 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 358 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.0990 2.2305 2774 0.2177 100.00 0.3144 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.2305 2.4027 2768 0.1952 100.00 0.2584 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.4027 2.6444 2766 0.1937 100.00 0.2538 . . 157 . . . . 'X-RAY DIFFRACTION' . 2.6444 3.0270 2781 0.1966 100.00 0.2567 . . 168 . . . . 'X-RAY DIFFRACTION' . 3.0270 3.8134 2834 0.1777 100.00 0.2234 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.8134 45.5070 2999 0.1631 100.00 0.1957 . . 161 . . . . # _struct.entry_id 5V4K _struct.title 'Crystal structure of NEDD4 LIR-fused human LC3B_2-119' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5V4K _struct_keywords.text 'Autophagy, Ubiquitin E3 ligase, HECT, LIR, LC3, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 19 ? ARG A 24 ? THR A 1006 ARG A 1011 1 ? 6 HELX_P HELX_P2 AA2 THR A 25 ? HIS A 40 ? THR A 1012 HIS A 1027 1 ? 16 HELX_P HELX_P3 AA3 ASN A 72 ? LEU A 84 ? ASN A 1059 LEU A 1071 1 ? 13 HELX_P HELX_P4 AA4 PRO A 107 ? LYS A 116 ? PRO A 1094 LYS A 1103 1 ? 10 HELX_P HELX_P5 AA5 THR B 19 ? ARG B 24 ? THR B 1006 ARG B 1011 1 ? 6 HELX_P HELX_P6 AA6 THR B 25 ? HIS B 40 ? THR B 1012 HIS B 1027 1 ? 16 HELX_P HELX_P7 AA7 ASN B 72 ? GLN B 85 ? ASN B 1059 GLN B 1072 1 ? 14 HELX_P HELX_P8 AA8 PRO B 107 ? LYS B 116 ? PRO B 1094 LYS B 1103 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 64 ? PRO A 68 ? LYS A 1051 PRO A 1055 AA1 2 LYS A 43 ? ARG A 50 ? LYS A 1030 ARG A 1037 AA1 3 LEU A 122 ? ALA A 127 ? LEU A 1109 ALA A 1114 AA1 4 PHE A 93 ? VAL A 96 ? PHE A 1080 VAL A 1083 AA2 1 LYS B 64 ? PRO B 68 ? LYS B 1051 PRO B 1055 AA2 2 LYS B 43 ? ARG B 50 ? LYS B 1030 ARG B 1037 AA2 3 LEU B 122 ? ALA B 127 ? LEU B 1109 ALA B 1114 AA2 4 PHE B 93 ? VAL B 96 ? PHE B 1080 VAL B 1083 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O PHE A 65 ? O PHE A 1052 N VAL A 46 ? N VAL A 1033 AA1 2 3 N ILE A 47 ? N ILE A 1034 O LEU A 122 ? O LEU A 1109 AA1 3 4 O VAL A 125 ? O VAL A 1112 N LEU A 95 ? N LEU A 1082 AA2 1 2 O PHE B 65 ? O PHE B 1052 N VAL B 46 ? N VAL B 1033 AA2 2 3 N ILE B 47 ? N ILE B 1034 O MET B 124 ? O MET B 1111 AA2 3 4 O VAL B 125 ? O VAL B 1112 N LEU B 95 ? N LEU B 1082 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 1201 ? 5 'binding site for residue GOL A 1201' AC2 Software A SO4 1202 ? 4 'binding site for residue SO4 A 1202' AC3 Software B GOL 1201 ? 8 'binding site for residue GOL B 1201' AC4 Software B SO4 1202 ? 5 'binding site for residue SO4 B 1202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLN A 39 ? GLN A 1026 . ? 1_555 ? 2 AC1 5 HIS A 40 ? HIS A 1027 . ? 1_555 ? 3 AC1 5 PRO A 41 ? PRO A 1028 . ? 1_555 ? 4 AC1 5 THR A 42 ? THR A 1029 . ? 1_555 ? 5 AC1 5 LYS A 43 ? LYS A 1030 . ? 1_555 ? 6 AC2 4 ILE A 12 ? ILE A 269 . ? 5_454 ? 7 AC2 4 GLY A 13 ? GLY A 270 . ? 5_454 ? 8 AC2 4 ARG A 82 ? ARG A 1069 . ? 1_555 ? 9 AC2 4 ARG A 83 ? ARG A 1070 . ? 1_555 ? 10 AC3 8 SER A 100 ? SER A 1087 . ? 1_555 ? 11 AC3 8 MET A 101 ? MET A 1088 . ? 1_555 ? 12 AC3 8 VAL A 102 ? VAL A 1089 . ? 1_555 ? 13 AC3 8 SER A 103 ? SER A 1090 . ? 1_555 ? 14 AC3 8 MET B 101 ? MET B 1088 . ? 1_555 ? 15 AC3 8 VAL B 102 ? VAL B 1089 . ? 1_555 ? 16 AC3 8 SER B 103 ? SER B 1090 . ? 1_555 ? 17 AC3 8 GLU B 115 ? GLU B 1102 . ? 1_555 ? 18 AC4 5 GLN B 39 ? GLN B 1026 . ? 1_555 ? 19 AC4 5 HIS B 40 ? HIS B 1027 . ? 1_555 ? 20 AC4 5 PRO B 41 ? PRO B 1028 . ? 1_555 ? 21 AC4 5 THR B 42 ? THR B 1029 . ? 1_555 ? 22 AC4 5 LYS B 43 ? LYS B 1030 . ? 1_555 ? # _atom_sites.entry_id 5V4K _atom_sites.fract_transf_matrix[1][1] 0.014374 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014374 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008360 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 258 ? ? ? A . n A 1 2 SER 2 259 ? ? ? A . n A 1 3 GLN 3 260 ? ? ? A . n A 1 4 GLU 4 261 ? ? ? A . n A 1 5 SER 5 262 ? ? ? A . n A 1 6 SER 6 263 ? ? ? A . n A 1 7 GLU 7 264 264 GLU GLU A . n A 1 8 ASN 8 265 265 ASN ASN A . n A 1 9 TRP 9 266 266 TRP TRP A . n A 1 10 GLU 10 267 267 GLU GLU A . n A 1 11 ILE 11 268 268 ILE ILE A . n A 1 12 ILE 12 269 269 ILE ILE A . n A 1 13 GLY 13 270 270 GLY GLY A . n A 1 14 SER 14 271 271 SER SER A . n A 1 15 PRO 15 1002 1002 PRO PRO A . n A 1 16 SER 16 1003 1003 SER SER A . n A 1 17 GLU 17 1004 1004 GLU GLU A . n A 1 18 LYS 18 1005 1005 LYS LYS A . n A 1 19 THR 19 1006 1006 THR THR A . n A 1 20 PHE 20 1007 1007 PHE PHE A . n A 1 21 LYS 21 1008 1008 LYS LYS A . n A 1 22 GLN 22 1009 1009 GLN GLN A . n A 1 23 ARG 23 1010 1010 ARG ARG A . n A 1 24 ARG 24 1011 1011 ARG ARG A . n A 1 25 THR 25 1012 1012 THR THR A . n A 1 26 PHE 26 1013 1013 PHE PHE A . n A 1 27 GLU 27 1014 1014 GLU GLU A . n A 1 28 GLN 28 1015 1015 GLN GLN A . n A 1 29 ARG 29 1016 1016 ARG ARG A . n A 1 30 VAL 30 1017 1017 VAL VAL A . n A 1 31 GLU 31 1018 1018 GLU GLU A . n A 1 32 ASP 32 1019 1019 ASP ASP A . n A 1 33 VAL 33 1020 1020 VAL VAL A . n A 1 34 ARG 34 1021 1021 ARG ARG A . n A 1 35 LEU 35 1022 1022 LEU LEU A . n A 1 36 ILE 36 1023 1023 ILE ILE A . n A 1 37 ARG 37 1024 1024 ARG ARG A . n A 1 38 GLU 38 1025 1025 GLU GLU A . n A 1 39 GLN 39 1026 1026 GLN GLN A . n A 1 40 HIS 40 1027 1027 HIS HIS A . n A 1 41 PRO 41 1028 1028 PRO PRO A . n A 1 42 THR 42 1029 1029 THR THR A . n A 1 43 LYS 43 1030 1030 LYS LYS A . n A 1 44 ILE 44 1031 1031 ILE ILE A . n A 1 45 PRO 45 1032 1032 PRO PRO A . n A 1 46 VAL 46 1033 1033 VAL VAL A . n A 1 47 ILE 47 1034 1034 ILE ILE A . n A 1 48 ILE 48 1035 1035 ILE ILE A . n A 1 49 GLU 49 1036 1036 GLU GLU A . n A 1 50 ARG 50 1037 1037 ARG ARG A . n A 1 51 TYR 51 1038 1038 TYR TYR A . n A 1 52 LYS 52 1039 1039 LYS LYS A . n A 1 53 GLY 53 1040 1040 GLY GLY A . n A 1 54 GLU 54 1041 1041 GLU GLU A . n A 1 55 LYS 55 1042 1042 LYS LYS A . n A 1 56 GLN 56 1043 1043 GLN GLN A . n A 1 57 LEU 57 1044 1044 LEU LEU A . n A 1 58 PRO 58 1045 1045 PRO PRO A . n A 1 59 VAL 59 1046 1046 VAL VAL A . n A 1 60 LEU 60 1047 1047 LEU LEU A . n A 1 61 ASP 61 1048 1048 ASP ASP A . n A 1 62 LYS 62 1049 1049 LYS LYS A . n A 1 63 THR 63 1050 1050 THR THR A . n A 1 64 LYS 64 1051 1051 LYS LYS A . n A 1 65 PHE 65 1052 1052 PHE PHE A . n A 1 66 LEU 66 1053 1053 LEU LEU A . n A 1 67 VAL 67 1054 1054 VAL VAL A . n A 1 68 PRO 68 1055 1055 PRO PRO A . n A 1 69 ASP 69 1056 1056 ASP ASP A . n A 1 70 HIS 70 1057 1057 HIS HIS A . n A 1 71 VAL 71 1058 1058 VAL VAL A . n A 1 72 ASN 72 1059 1059 ASN ASN A . n A 1 73 MET 73 1060 1060 MET MET A . n A 1 74 SER 74 1061 1061 SER SER A . n A 1 75 GLU 75 1062 1062 GLU GLU A . n A 1 76 LEU 76 1063 1063 LEU LEU A . n A 1 77 ILE 77 1064 1064 ILE ILE A . n A 1 78 LYS 78 1065 1065 LYS LYS A . n A 1 79 ILE 79 1066 1066 ILE ILE A . n A 1 80 ILE 80 1067 1067 ILE ILE A . n A 1 81 ARG 81 1068 1068 ARG ARG A . n A 1 82 ARG 82 1069 1069 ARG ARG A . n A 1 83 ARG 83 1070 1070 ARG ARG A . n A 1 84 LEU 84 1071 1071 LEU LEU A . n A 1 85 GLN 85 1072 1072 GLN GLN A . n A 1 86 LEU 86 1073 1073 LEU LEU A . n A 1 87 ASN 87 1074 1074 ASN ASN A . n A 1 88 ALA 88 1075 1075 ALA ALA A . n A 1 89 ASN 89 1076 1076 ASN ASN A . n A 1 90 GLN 90 1077 1077 GLN GLN A . n A 1 91 ALA 91 1078 1078 ALA ALA A . n A 1 92 PHE 92 1079 1079 PHE PHE A . n A 1 93 PHE 93 1080 1080 PHE PHE A . n A 1 94 LEU 94 1081 1081 LEU LEU A . n A 1 95 LEU 95 1082 1082 LEU LEU A . n A 1 96 VAL 96 1083 1083 VAL VAL A . n A 1 97 ASN 97 1084 1084 ASN ASN A . n A 1 98 GLY 98 1085 1085 GLY GLY A . n A 1 99 HIS 99 1086 1086 HIS HIS A . n A 1 100 SER 100 1087 1087 SER SER A . n A 1 101 MET 101 1088 1088 MET MET A . n A 1 102 VAL 102 1089 1089 VAL VAL A . n A 1 103 SER 103 1090 1090 SER SER A . n A 1 104 VAL 104 1091 1091 VAL VAL A . n A 1 105 SER 105 1092 1092 SER SER A . n A 1 106 THR 106 1093 1093 THR THR A . n A 1 107 PRO 107 1094 1094 PRO PRO A . n A 1 108 ILE 108 1095 1095 ILE ILE A . n A 1 109 SER 109 1096 1096 SER SER A . n A 1 110 GLU 110 1097 1097 GLU GLU A . n A 1 111 VAL 111 1098 1098 VAL VAL A . n A 1 112 TYR 112 1099 1099 TYR TYR A . n A 1 113 GLU 113 1100 1100 GLU GLU A . n A 1 114 SER 114 1101 1101 SER SER A . n A 1 115 GLU 115 1102 1102 GLU GLU A . n A 1 116 LYS 116 1103 1103 LYS LYS A . n A 1 117 ASP 117 1104 1104 ASP ASP A . n A 1 118 GLU 118 1105 1105 GLU GLU A . n A 1 119 ASP 119 1106 1106 ASP ASP A . n A 1 120 GLY 120 1107 1107 GLY GLY A . n A 1 121 PHE 121 1108 1108 PHE PHE A . n A 1 122 LEU 122 1109 1109 LEU LEU A . n A 1 123 TYR 123 1110 1110 TYR TYR A . n A 1 124 MET 124 1111 1111 MET MET A . n A 1 125 VAL 125 1112 1112 VAL VAL A . n A 1 126 TYR 126 1113 1113 TYR TYR A . n A 1 127 ALA 127 1114 1114 ALA ALA A . n A 1 128 SER 128 1115 1115 SER SER A . n A 1 129 GLN 129 1116 1116 GLN GLN A . n A 1 130 GLU 130 1117 1117 GLU GLU A . n A 1 131 THR 131 1118 1118 THR THR A . n A 1 132 PHE 132 1119 ? ? ? A . n B 1 1 GLY 1 258 ? ? ? B . n B 1 2 SER 2 259 ? ? ? B . n B 1 3 GLN 3 260 ? ? ? B . n B 1 4 GLU 4 261 ? ? ? B . n B 1 5 SER 5 262 ? ? ? B . n B 1 6 SER 6 263 ? ? ? B . n B 1 7 GLU 7 264 264 GLU GLU B . n B 1 8 ASN 8 265 265 ASN ASN B . n B 1 9 TRP 9 266 266 TRP TRP B . n B 1 10 GLU 10 267 267 GLU GLU B . n B 1 11 ILE 11 268 268 ILE ILE B . n B 1 12 ILE 12 269 269 ILE ILE B . n B 1 13 GLY 13 270 270 GLY GLY B . n B 1 14 SER 14 271 271 SER SER B . n B 1 15 PRO 15 1002 1002 PRO PRO B . n B 1 16 SER 16 1003 1003 SER SER B . n B 1 17 GLU 17 1004 1004 GLU GLU B . n B 1 18 LYS 18 1005 1005 LYS LYS B . n B 1 19 THR 19 1006 1006 THR THR B . n B 1 20 PHE 20 1007 1007 PHE PHE B . n B 1 21 LYS 21 1008 1008 LYS LYS B . n B 1 22 GLN 22 1009 1009 GLN GLN B . n B 1 23 ARG 23 1010 1010 ARG ARG B . n B 1 24 ARG 24 1011 1011 ARG ARG B . n B 1 25 THR 25 1012 1012 THR THR B . n B 1 26 PHE 26 1013 1013 PHE PHE B . n B 1 27 GLU 27 1014 1014 GLU GLU B . n B 1 28 GLN 28 1015 1015 GLN GLN B . n B 1 29 ARG 29 1016 1016 ARG ARG B . n B 1 30 VAL 30 1017 1017 VAL VAL B . n B 1 31 GLU 31 1018 1018 GLU GLU B . n B 1 32 ASP 32 1019 1019 ASP ASP B . n B 1 33 VAL 33 1020 1020 VAL VAL B . n B 1 34 ARG 34 1021 1021 ARG ARG B . n B 1 35 LEU 35 1022 1022 LEU LEU B . n B 1 36 ILE 36 1023 1023 ILE ILE B . n B 1 37 ARG 37 1024 1024 ARG ARG B . n B 1 38 GLU 38 1025 1025 GLU GLU B . n B 1 39 GLN 39 1026 1026 GLN GLN B . n B 1 40 HIS 40 1027 1027 HIS HIS B . n B 1 41 PRO 41 1028 1028 PRO PRO B . n B 1 42 THR 42 1029 1029 THR THR B . n B 1 43 LYS 43 1030 1030 LYS LYS B . n B 1 44 ILE 44 1031 1031 ILE ILE B . n B 1 45 PRO 45 1032 1032 PRO PRO B . n B 1 46 VAL 46 1033 1033 VAL VAL B . n B 1 47 ILE 47 1034 1034 ILE ILE B . n B 1 48 ILE 48 1035 1035 ILE ILE B . n B 1 49 GLU 49 1036 1036 GLU GLU B . n B 1 50 ARG 50 1037 1037 ARG ARG B . n B 1 51 TYR 51 1038 1038 TYR TYR B . n B 1 52 LYS 52 1039 1039 LYS LYS B . n B 1 53 GLY 53 1040 1040 GLY GLY B . n B 1 54 GLU 54 1041 1041 GLU GLU B . n B 1 55 LYS 55 1042 1042 LYS LYS B . n B 1 56 GLN 56 1043 1043 GLN GLN B . n B 1 57 LEU 57 1044 1044 LEU LEU B . n B 1 58 PRO 58 1045 1045 PRO PRO B . n B 1 59 VAL 59 1046 1046 VAL VAL B . n B 1 60 LEU 60 1047 1047 LEU LEU B . n B 1 61 ASP 61 1048 1048 ASP ASP B . n B 1 62 LYS 62 1049 1049 LYS LYS B . n B 1 63 THR 63 1050 1050 THR THR B . n B 1 64 LYS 64 1051 1051 LYS LYS B . n B 1 65 PHE 65 1052 1052 PHE PHE B . n B 1 66 LEU 66 1053 1053 LEU LEU B . n B 1 67 VAL 67 1054 1054 VAL VAL B . n B 1 68 PRO 68 1055 1055 PRO PRO B . n B 1 69 ASP 69 1056 1056 ASP ASP B . n B 1 70 HIS 70 1057 1057 HIS HIS B . n B 1 71 VAL 71 1058 1058 VAL VAL B . n B 1 72 ASN 72 1059 1059 ASN ASN B . n B 1 73 MET 73 1060 1060 MET MET B . n B 1 74 SER 74 1061 1061 SER SER B . n B 1 75 GLU 75 1062 1062 GLU GLU B . n B 1 76 LEU 76 1063 1063 LEU LEU B . n B 1 77 ILE 77 1064 1064 ILE ILE B . n B 1 78 LYS 78 1065 1065 LYS LYS B . n B 1 79 ILE 79 1066 1066 ILE ILE B . n B 1 80 ILE 80 1067 1067 ILE ILE B . n B 1 81 ARG 81 1068 1068 ARG ARG B . n B 1 82 ARG 82 1069 1069 ARG ARG B . n B 1 83 ARG 83 1070 1070 ARG ARG B . n B 1 84 LEU 84 1071 1071 LEU LEU B . n B 1 85 GLN 85 1072 1072 GLN GLN B . n B 1 86 LEU 86 1073 1073 LEU LEU B . n B 1 87 ASN 87 1074 1074 ASN ASN B . n B 1 88 ALA 88 1075 1075 ALA ALA B . n B 1 89 ASN 89 1076 1076 ASN ASN B . n B 1 90 GLN 90 1077 1077 GLN GLN B . n B 1 91 ALA 91 1078 1078 ALA ALA B . n B 1 92 PHE 92 1079 1079 PHE PHE B . n B 1 93 PHE 93 1080 1080 PHE PHE B . n B 1 94 LEU 94 1081 1081 LEU LEU B . n B 1 95 LEU 95 1082 1082 LEU LEU B . n B 1 96 VAL 96 1083 1083 VAL VAL B . n B 1 97 ASN 97 1084 1084 ASN ASN B . n B 1 98 GLY 98 1085 1085 GLY GLY B . n B 1 99 HIS 99 1086 1086 HIS HIS B . n B 1 100 SER 100 1087 1087 SER SER B . n B 1 101 MET 101 1088 1088 MET MET B . n B 1 102 VAL 102 1089 1089 VAL VAL B . n B 1 103 SER 103 1090 1090 SER SER B . n B 1 104 VAL 104 1091 1091 VAL VAL B . n B 1 105 SER 105 1092 1092 SER SER B . n B 1 106 THR 106 1093 1093 THR THR B . n B 1 107 PRO 107 1094 1094 PRO PRO B . n B 1 108 ILE 108 1095 1095 ILE ILE B . n B 1 109 SER 109 1096 1096 SER SER B . n B 1 110 GLU 110 1097 1097 GLU GLU B . n B 1 111 VAL 111 1098 1098 VAL VAL B . n B 1 112 TYR 112 1099 1099 TYR TYR B . n B 1 113 GLU 113 1100 1100 GLU GLU B . n B 1 114 SER 114 1101 1101 SER SER B . n B 1 115 GLU 115 1102 1102 GLU GLU B . n B 1 116 LYS 116 1103 1103 LYS LYS B . n B 1 117 ASP 117 1104 1104 ASP ASP B . n B 1 118 GLU 118 1105 1105 GLU GLU B . n B 1 119 ASP 119 1106 1106 ASP ASP B . n B 1 120 GLY 120 1107 1107 GLY GLY B . n B 1 121 PHE 121 1108 1108 PHE PHE B . n B 1 122 LEU 122 1109 1109 LEU LEU B . n B 1 123 TYR 123 1110 1110 TYR TYR B . n B 1 124 MET 124 1111 1111 MET MET B . n B 1 125 VAL 125 1112 1112 VAL VAL B . n B 1 126 TYR 126 1113 1113 TYR TYR B . n B 1 127 ALA 127 1114 1114 ALA ALA B . n B 1 128 SER 128 1115 1115 SER SER B . n B 1 129 GLN 129 1116 1116 GLN GLN B . n B 1 130 GLU 130 1117 1117 GLU GLU B . n B 1 131 THR 131 1118 ? ? ? B . n B 1 132 PHE 132 1119 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 1201 2 GOL GOL A . D 3 SO4 1 1202 2 SO4 SO4 A . E 2 GOL 1 1201 3 GOL GOL B . F 3 SO4 1 1202 1 SO4 SO4 B . G 4 HOH 1 1301 135 HOH HOH A . G 4 HOH 2 1302 77 HOH HOH A . G 4 HOH 3 1303 2 HOH HOH A . G 4 HOH 4 1304 63 HOH HOH A . G 4 HOH 5 1305 100 HOH HOH A . G 4 HOH 6 1306 93 HOH HOH A . G 4 HOH 7 1307 81 HOH HOH A . G 4 HOH 8 1308 98 HOH HOH A . G 4 HOH 9 1309 46 HOH HOH A . G 4 HOH 10 1310 1 HOH HOH A . G 4 HOH 11 1311 83 HOH HOH A . G 4 HOH 12 1312 57 HOH HOH A . G 4 HOH 13 1313 102 HOH HOH A . G 4 HOH 14 1314 61 HOH HOH A . G 4 HOH 15 1315 64 HOH HOH A . G 4 HOH 16 1316 47 HOH HOH A . G 4 HOH 17 1317 53 HOH HOH A . G 4 HOH 18 1318 73 HOH HOH A . G 4 HOH 19 1319 3 HOH HOH A . G 4 HOH 20 1320 107 HOH HOH A . G 4 HOH 21 1321 43 HOH HOH A . G 4 HOH 22 1322 113 HOH HOH A . G 4 HOH 23 1323 49 HOH HOH A . G 4 HOH 24 1324 116 HOH HOH A . G 4 HOH 25 1325 120 HOH HOH A . G 4 HOH 26 1326 9 HOH HOH A . G 4 HOH 27 1327 67 HOH HOH A . G 4 HOH 28 1328 97 HOH HOH A . G 4 HOH 29 1329 32 HOH HOH A . G 4 HOH 30 1330 5 HOH HOH A . G 4 HOH 31 1331 103 HOH HOH A . G 4 HOH 32 1332 4 HOH HOH A . G 4 HOH 33 1333 106 HOH HOH A . G 4 HOH 34 1334 13 HOH HOH A . G 4 HOH 35 1335 109 HOH HOH A . G 4 HOH 36 1336 65 HOH HOH A . G 4 HOH 37 1337 12 HOH HOH A . G 4 HOH 38 1338 115 HOH HOH A . G 4 HOH 39 1339 101 HOH HOH A . G 4 HOH 40 1340 126 HOH HOH A . G 4 HOH 41 1341 51 HOH HOH A . G 4 HOH 42 1342 22 HOH HOH A . G 4 HOH 43 1343 40 HOH HOH A . G 4 HOH 44 1344 27 HOH HOH A . G 4 HOH 45 1345 44 HOH HOH A . G 4 HOH 46 1346 54 HOH HOH A . G 4 HOH 47 1347 85 HOH HOH A . G 4 HOH 48 1348 42 HOH HOH A . G 4 HOH 49 1349 60 HOH HOH A . G 4 HOH 50 1350 82 HOH HOH A . G 4 HOH 51 1351 31 HOH HOH A . G 4 HOH 52 1352 26 HOH HOH A . G 4 HOH 53 1353 139 HOH HOH A . G 4 HOH 54 1354 16 HOH HOH A . G 4 HOH 55 1355 20 HOH HOH A . G 4 HOH 56 1356 41 HOH HOH A . G 4 HOH 57 1357 91 HOH HOH A . G 4 HOH 58 1358 52 HOH HOH A . G 4 HOH 59 1359 90 HOH HOH A . G 4 HOH 60 1360 117 HOH HOH A . G 4 HOH 61 1361 108 HOH HOH A . G 4 HOH 62 1362 138 HOH HOH A . G 4 HOH 63 1363 110 HOH HOH A . G 4 HOH 64 1364 55 HOH HOH A . G 4 HOH 65 1365 75 HOH HOH A . G 4 HOH 66 1366 45 HOH HOH A . G 4 HOH 67 1367 125 HOH HOH A . G 4 HOH 68 1368 127 HOH HOH A . G 4 HOH 69 1369 129 HOH HOH A . G 4 HOH 70 1370 59 HOH HOH A . G 4 HOH 71 1371 74 HOH HOH A . G 4 HOH 72 1372 133 HOH HOH A . G 4 HOH 73 1373 50 HOH HOH A . H 4 HOH 1 1301 92 HOH HOH B . H 4 HOH 2 1302 48 HOH HOH B . H 4 HOH 3 1303 62 HOH HOH B . H 4 HOH 4 1304 35 HOH HOH B . H 4 HOH 5 1305 104 HOH HOH B . H 4 HOH 6 1306 84 HOH HOH B . H 4 HOH 7 1307 7 HOH HOH B . H 4 HOH 8 1308 130 HOH HOH B . H 4 HOH 9 1309 58 HOH HOH B . H 4 HOH 10 1310 86 HOH HOH B . H 4 HOH 11 1311 87 HOH HOH B . H 4 HOH 12 1312 37 HOH HOH B . H 4 HOH 13 1313 72 HOH HOH B . H 4 HOH 14 1314 10 HOH HOH B . H 4 HOH 15 1315 119 HOH HOH B . H 4 HOH 16 1316 19 HOH HOH B . H 4 HOH 17 1317 112 HOH HOH B . H 4 HOH 18 1318 24 HOH HOH B . H 4 HOH 19 1319 33 HOH HOH B . H 4 HOH 20 1320 39 HOH HOH B . H 4 HOH 21 1321 23 HOH HOH B . H 4 HOH 22 1322 8 HOH HOH B . H 4 HOH 23 1323 15 HOH HOH B . H 4 HOH 24 1324 21 HOH HOH B . H 4 HOH 25 1325 30 HOH HOH B . H 4 HOH 26 1326 36 HOH HOH B . H 4 HOH 27 1327 6 HOH HOH B . H 4 HOH 28 1328 70 HOH HOH B . H 4 HOH 29 1329 78 HOH HOH B . H 4 HOH 30 1330 14 HOH HOH B . H 4 HOH 31 1331 34 HOH HOH B . H 4 HOH 32 1332 68 HOH HOH B . H 4 HOH 33 1333 25 HOH HOH B . H 4 HOH 34 1334 88 HOH HOH B . H 4 HOH 35 1335 80 HOH HOH B . H 4 HOH 36 1336 66 HOH HOH B . H 4 HOH 37 1337 18 HOH HOH B . H 4 HOH 38 1338 28 HOH HOH B . H 4 HOH 39 1339 99 HOH HOH B . H 4 HOH 40 1340 29 HOH HOH B . H 4 HOH 41 1341 96 HOH HOH B . H 4 HOH 42 1342 17 HOH HOH B . H 4 HOH 43 1343 136 HOH HOH B . H 4 HOH 44 1344 79 HOH HOH B . H 4 HOH 45 1345 111 HOH HOH B . H 4 HOH 46 1346 114 HOH HOH B . H 4 HOH 47 1347 76 HOH HOH B . H 4 HOH 48 1348 69 HOH HOH B . H 4 HOH 49 1349 118 HOH HOH B . H 4 HOH 50 1350 142 HOH HOH B . H 4 HOH 51 1351 122 HOH HOH B . H 4 HOH 52 1352 123 HOH HOH B . H 4 HOH 53 1353 140 HOH HOH B . H 4 HOH 54 1354 121 HOH HOH B . H 4 HOH 55 1355 95 HOH HOH B . H 4 HOH 56 1356 124 HOH HOH B . H 4 HOH 57 1357 134 HOH HOH B . H 4 HOH 58 1358 38 HOH HOH B . H 4 HOH 59 1359 11 HOH HOH B . H 4 HOH 60 1360 89 HOH HOH B . H 4 HOH 61 1361 56 HOH HOH B . H 4 HOH 62 1362 105 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-17 2 'Structure model' 1 1 2017-08-02 3 'Structure model' 1 2 2022-04-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' pdbx_audit_support 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_pdbx_audit_support.funding_organization' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -17.6893 -4.6016 -7.1562 0.2423 0.4038 0.3091 0.1599 0.0420 0.0842 1.7404 6.2651 4.1271 -1.3533 -0.7174 4.0022 0.1734 0.1962 -0.0475 -0.4318 -0.4212 -0.4213 -0.0738 0.1787 0.0530 'X-RAY DIFFRACTION' 2 ? refined -24.7552 8.8277 -15.9553 0.1256 0.1371 0.1865 -0.0334 -0.0196 0.0379 2.0708 2.3354 6.0084 0.1596 -0.8993 -0.7563 -0.2094 0.0049 0.0615 -0.2599 0.0685 -0.0295 0.0613 0.2894 0.1211 'X-RAY DIFFRACTION' 3 ? refined -48.4781 -44.2499 -6.9368 0.4131 0.4094 0.7857 0.3467 -0.0924 0.2278 4.3946 7.4846 5.2744 0.0867 -0.7562 -1.3147 0.3373 0.0100 -0.9555 -0.2763 -0.0011 -0.4130 0.8834 0.4155 -0.1215 'X-RAY DIFFRACTION' 4 ? refined -43.1827 -21.8038 -17.9496 0.5446 0.2621 0.4695 -0.0573 0.0743 0.0647 1.3784 0.2706 1.6587 0.6489 -1.3229 -0.6424 -0.0737 -0.4495 -0.5155 -0.2602 -0.2061 0.2638 -0.4721 0.1986 0.1919 'X-RAY DIFFRACTION' 5 ? refined -45.6535 -10.4273 -32.0947 0.4224 0.2333 0.2657 -0.0633 -0.0048 -0.1038 8.2778 8.9173 3.5450 -7.1910 2.6677 -3.4087 -0.0008 0.5617 -0.5483 -0.7035 -0.1480 0.5711 0.7999 -0.0156 0.1006 'X-RAY DIFFRACTION' 6 ? refined -49.6860 -5.0621 -21.8789 0.3050 0.2144 0.2434 -0.1506 0.0285 -0.0437 2.3718 3.4015 4.6447 -1.4514 1.1585 -2.6535 0.0992 0.0487 -0.5338 0.3866 -0.0958 0.3780 0.4955 -0.5882 -0.1349 'X-RAY DIFFRACTION' 7 ? refined -48.2981 -11.9647 -6.7603 0.8304 0.4154 0.3912 -0.1592 0.1093 0.1934 3.3257 2.9989 4.2115 -0.9893 -3.5005 2.2225 -0.4035 -0.8489 -0.3862 0.4859 0.5275 0.1775 0.8962 0.1818 -0.1054 'X-RAY DIFFRACTION' 8 ? refined -53.4420 0.1518 -14.5793 0.1855 0.3703 0.2490 -0.1071 0.0353 -0.0939 0.6645 2.3058 5.9677 0.0067 1.9404 -0.5341 -0.1037 -0.2883 0.0364 0.1729 -0.0747 0.1189 0.0634 -1.4856 0.1392 'X-RAY DIFFRACTION' 9 ? refined -46.0340 0.5292 -8.1379 0.2657 0.2849 0.2282 -0.1012 -0.0064 -0.0656 2.0592 2.3300 2.4944 -1.7335 0.6878 0.3818 -0.0781 -0.4897 0.3128 -0.0006 0.0105 0.0637 0.3209 -0.1763 0.0129 'X-RAY DIFFRACTION' 10 ? refined -42.0333 -2.6734 -18.4676 0.2604 0.1959 0.1760 -0.0688 0.0156 -0.0305 1.6241 1.6381 4.4195 -0.6837 -0.6267 -2.0252 0.0289 -0.4269 0.0870 0.2979 -0.1672 0.0161 -0.0035 0.3251 0.1317 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 264 through 1026 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1027 through 1118 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 264 through 268 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 269 through 1012 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1013 through 1026 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1027 through 1037 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1038 through 1050 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1051 through 1071 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1072 through 1094 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1095 through 1117 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11.1_2575 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 1316 ? ? O B HOH 1344 ? ? 2.05 2 1 O A HOH 1353 ? ? O A HOH 1362 ? ? 2.10 3 1 O B HOH 1331 ? ? O B HOH 1348 ? ? 2.14 4 1 O A HOH 1365 ? ? O A HOH 1371 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 1362 ? ? 1_555 O B HOH 1352 ? ? 4_445 2.07 2 1 O A HOH 1353 ? ? 1_555 O B HOH 1310 ? ? 4_445 2.14 3 1 O B HOH 1308 ? ? 1_555 O B HOH 1357 ? ? 5_354 2.15 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 264 ? CG ? A GLU 7 CG 2 1 Y 1 A GLU 264 ? CD ? A GLU 7 CD 3 1 Y 1 A GLU 264 ? OE1 ? A GLU 7 OE1 4 1 Y 1 A GLU 264 ? OE2 ? A GLU 7 OE2 5 1 Y 1 A SER 1003 ? OG ? A SER 16 OG 6 1 Y 1 A GLU 1004 ? CG ? A GLU 17 CG 7 1 Y 1 A GLU 1004 ? CD ? A GLU 17 CD 8 1 Y 1 A GLU 1004 ? OE1 ? A GLU 17 OE1 9 1 Y 1 A GLU 1004 ? OE2 ? A GLU 17 OE2 10 1 Y 1 A LYS 1005 ? CG ? A LYS 18 CG 11 1 Y 1 A LYS 1005 ? CD ? A LYS 18 CD 12 1 Y 1 A LYS 1005 ? CE ? A LYS 18 CE 13 1 Y 1 A LYS 1005 ? NZ ? A LYS 18 NZ 14 1 Y 1 A LYS 1039 ? CG ? A LYS 52 CG 15 1 Y 1 A LYS 1039 ? CD ? A LYS 52 CD 16 1 Y 1 A LYS 1039 ? CE ? A LYS 52 CE 17 1 Y 1 A LYS 1039 ? NZ ? A LYS 52 NZ 18 1 Y 1 A ASP 1048 ? CG ? A ASP 61 CG 19 1 Y 1 A ASP 1048 ? OD1 ? A ASP 61 OD1 20 1 Y 1 A ASP 1048 ? OD2 ? A ASP 61 OD2 21 1 Y 1 B GLU 264 ? CG ? B GLU 7 CG 22 1 Y 1 B GLU 264 ? CD ? B GLU 7 CD 23 1 Y 1 B GLU 264 ? OE1 ? B GLU 7 OE1 24 1 Y 1 B GLU 264 ? OE2 ? B GLU 7 OE2 25 1 Y 1 B ASN 265 ? CG ? B ASN 8 CG 26 1 Y 1 B ASN 265 ? OD1 ? B ASN 8 OD1 27 1 Y 1 B ASN 265 ? ND2 ? B ASN 8 ND2 28 1 Y 1 B SER 1003 ? OG ? B SER 16 OG 29 1 Y 1 B GLU 1004 ? CG ? B GLU 17 CG 30 1 Y 1 B GLU 1004 ? CD ? B GLU 17 CD 31 1 Y 1 B GLU 1004 ? OE1 ? B GLU 17 OE1 32 1 Y 1 B GLU 1004 ? OE2 ? B GLU 17 OE2 33 1 Y 1 B ARG 1010 ? CG ? B ARG 23 CG 34 1 Y 1 B ARG 1010 ? CD ? B ARG 23 CD 35 1 Y 1 B ARG 1010 ? NE ? B ARG 23 NE 36 1 Y 1 B ARG 1010 ? CZ ? B ARG 23 CZ 37 1 Y 1 B ARG 1010 ? NH1 ? B ARG 23 NH1 38 1 Y 1 B ARG 1010 ? NH2 ? B ARG 23 NH2 39 1 Y 1 B GLU 1025 ? CG ? B GLU 38 CG 40 1 Y 1 B GLU 1025 ? CD ? B GLU 38 CD 41 1 Y 1 B GLU 1025 ? OE1 ? B GLU 38 OE1 42 1 Y 1 B GLU 1025 ? OE2 ? B GLU 38 OE2 43 1 Y 1 B LYS 1039 ? CG ? B LYS 52 CG 44 1 Y 1 B LYS 1039 ? CD ? B LYS 52 CD 45 1 Y 1 B LYS 1039 ? CE ? B LYS 52 CE 46 1 Y 1 B LYS 1039 ? NZ ? B LYS 52 NZ 47 1 Y 1 B LYS 1042 ? CG ? B LYS 55 CG 48 1 Y 1 B LYS 1042 ? CD ? B LYS 55 CD 49 1 Y 1 B LYS 1042 ? CE ? B LYS 55 CE 50 1 Y 1 B LYS 1042 ? NZ ? B LYS 55 NZ 51 1 Y 1 B ASP 1048 ? CG ? B ASP 61 CG 52 1 Y 1 B ASP 1048 ? OD1 ? B ASP 61 OD1 53 1 Y 1 B ASP 1048 ? OD2 ? B ASP 61 OD2 54 1 Y 1 B LYS 1049 ? CG ? B LYS 62 CG 55 1 Y 1 B LYS 1049 ? CD ? B LYS 62 CD 56 1 Y 1 B LYS 1049 ? CE ? B LYS 62 CE 57 1 Y 1 B LYS 1049 ? NZ ? B LYS 62 NZ 58 1 Y 1 B LYS 1051 ? CG ? B LYS 64 CG 59 1 Y 1 B LYS 1051 ? CD ? B LYS 64 CD 60 1 Y 1 B LYS 1051 ? CE ? B LYS 64 CE 61 1 Y 1 B LYS 1051 ? NZ ? B LYS 64 NZ 62 1 Y 1 B HIS 1057 ? CG ? B HIS 70 CG 63 1 Y 1 B HIS 1057 ? ND1 ? B HIS 70 ND1 64 1 Y 1 B HIS 1057 ? CD2 ? B HIS 70 CD2 65 1 Y 1 B HIS 1057 ? CE1 ? B HIS 70 CE1 66 1 Y 1 B HIS 1057 ? NE2 ? B HIS 70 NE2 67 1 Y 1 B SER 1090 ? OG ? B SER 103 OG 68 1 Y 1 B GLU 1105 ? CG ? B GLU 118 CG 69 1 Y 1 B GLU 1105 ? CD ? B GLU 118 CD 70 1 Y 1 B GLU 1105 ? OE1 ? B GLU 118 OE1 71 1 Y 1 B GLU 1105 ? OE2 ? B GLU 118 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 258 ? A GLY 1 2 1 Y 1 A SER 259 ? A SER 2 3 1 Y 1 A GLN 260 ? A GLN 3 4 1 Y 1 A GLU 261 ? A GLU 4 5 1 Y 1 A SER 262 ? A SER 5 6 1 Y 1 A SER 263 ? A SER 6 7 1 Y 1 A PHE 1119 ? A PHE 132 8 1 Y 1 B GLY 258 ? B GLY 1 9 1 Y 1 B SER 259 ? B SER 2 10 1 Y 1 B GLN 260 ? B GLN 3 11 1 Y 1 B GLU 261 ? B GLU 4 12 1 Y 1 B SER 262 ? B SER 5 13 1 Y 1 B SER 263 ? B SER 6 14 1 Y 1 B THR 1118 ? B THR 131 15 1 Y 1 B PHE 1119 ? B PHE 132 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'SULFATE ION' SO4 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #