HEADER RNA BINDING PROTEIN 10-MAR-17 5V4R TITLE CRYSTAL STRUCTURE OF LARP1-UNIQUE DOMAIN DM15 BOUND TO M7GTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: LA-RELATED PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LA RIBONUCLEOPROTEIN DOMAIN FAMILY MEMBER 1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LARP1, KIAA0731, LARP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CAP-BINDING, RNA-BINDING, DM15, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.J.BERMAN,R.M.LAHR REVDAT 2 04-OCT-23 5V4R 1 REMARK REVDAT 1 19-APR-17 5V4R 0 JRNL AUTH R.M.LAHR,B.D.FONSECA,G.E.CIOTTI,H.A.AL-ASHTAL,J.J.JIA, JRNL AUTH 2 M.R.NIKLAUS,S.P.BLAGDEN,T.ALAIN,A.J.BERMAN JRNL TITL LA-RELATED PROTEIN 1 (LARP1) BINDS THE MRNA CAP, BLOCKING JRNL TITL 2 EIF4F ASSEMBLY ON TOP MRNAS. JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28379136 JRNL DOI 10.7554/ELIFE.24146 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 81.9 REMARK 3 NUMBER OF REFLECTIONS : 27251 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1923 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.9016 - 4.2636 0.97 2209 165 0.1614 0.2101 REMARK 3 2 4.2636 - 3.3851 0.57 1267 97 0.1525 0.1442 REMARK 3 3 3.3851 - 2.9575 0.99 2195 165 0.1721 0.2203 REMARK 3 4 2.9575 - 2.6872 1.00 2207 166 0.1797 0.2203 REMARK 3 5 2.6872 - 2.4947 0.99 2179 165 0.1877 0.2177 REMARK 3 6 2.4947 - 2.3476 0.99 2193 164 0.1770 0.2035 REMARK 3 7 2.3476 - 2.2301 0.93 1122 83 0.1785 0.1964 REMARK 3 8 2.2301 - 2.1330 0.93 1784 136 0.1862 0.2155 REMARK 3 9 2.1330 - 2.0509 0.95 2079 159 0.1967 0.2455 REMARK 3 10 2.0509 - 1.9801 0.94 2073 159 0.2032 0.2393 REMARK 3 11 1.9801 - 1.9182 0.64 1400 105 0.2101 0.2429 REMARK 3 12 1.9182 - 1.8634 0.53 1158 92 0.2351 0.2948 REMARK 3 13 1.8634 - 1.8144 0.85 1861 146 0.2192 0.2450 REMARK 3 14 1.8144 - 1.7701 0.73 1601 121 0.2370 0.2686 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2769 REMARK 3 ANGLE : 0.481 3722 REMARK 3 CHIRALITY : 0.029 348 REMARK 3 PLANARITY : 0.002 468 REMARK 3 DIHEDRAL : 13.357 1618 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 794 THROUGH 809 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8839 0.2537 -11.4321 REMARK 3 T TENSOR REMARK 3 T11: 0.4028 T22: 0.5424 REMARK 3 T33: 0.5208 T12: 0.1004 REMARK 3 T13: 0.0397 T23: -0.2035 REMARK 3 L TENSOR REMARK 3 L11: 5.6010 L22: 1.0356 REMARK 3 L33: 1.0356 L12: -2.2679 REMARK 3 L13: 0.1153 L23: -0.3748 REMARK 3 S TENSOR REMARK 3 S11: 0.0847 S12: 0.8095 S13: -0.7447 REMARK 3 S21: -0.0355 S22: 0.6732 S23: -0.5396 REMARK 3 S31: 0.4018 S32: 0.5723 S33: -0.4838 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 810 THROUGH 827 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5844 8.8531 0.8806 REMARK 3 T TENSOR REMARK 3 T11: 0.2608 T22: 0.2917 REMARK 3 T33: 0.2984 T12: 0.0157 REMARK 3 T13: -0.0501 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 4.7190 L22: 8.2822 REMARK 3 L33: 5.4461 L12: -1.4164 REMARK 3 L13: 1.0746 L23: 1.2242 REMARK 3 S TENSOR REMARK 3 S11: 0.0127 S12: -0.0543 S13: -0.0181 REMARK 3 S21: 0.5511 S22: -0.0197 S23: -0.5478 REMARK 3 S31: 0.2879 S32: 0.5780 S33: -0.0136 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 828 THROUGH 906 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7859 8.7394 -5.3898 REMARK 3 T TENSOR REMARK 3 T11: 0.2202 T22: 0.2077 REMARK 3 T33: 0.1949 T12: -0.0016 REMARK 3 T13: 0.0096 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 2.3745 L22: 2.1956 REMARK 3 L33: 2.3593 L12: -0.2448 REMARK 3 L13: 0.8459 L23: -0.6284 REMARK 3 S TENSOR REMARK 3 S11: 0.0093 S12: -0.0330 S13: -0.0311 REMARK 3 S21: 0.0704 S22: -0.0129 S23: 0.0004 REMARK 3 S31: -0.0058 S32: -0.0821 S33: 0.0044 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 907 THROUGH 922 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7905 11.5351 -14.8555 REMARK 3 T TENSOR REMARK 3 T11: 0.2299 T22: 0.2500 REMARK 3 T33: 0.2466 T12: 0.0005 REMARK 3 T13: -0.0153 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 2.2884 L22: 9.3064 REMARK 3 L33: 3.0492 L12: -0.3254 REMARK 3 L13: 0.1669 L23: 2.3530 REMARK 3 S TENSOR REMARK 3 S11: -0.0118 S12: 0.1142 S13: 0.1033 REMARK 3 S21: -0.3911 S22: 0.0537 S23: -0.0162 REMARK 3 S31: -0.0662 S32: -0.0251 S33: -0.0203 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 923 THROUGH 931 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9085 0.1757 -11.5267 REMARK 3 T TENSOR REMARK 3 T11: 0.4494 T22: 0.4765 REMARK 3 T33: 0.4889 T12: -0.0572 REMARK 3 T13: 0.0078 T23: 0.0590 REMARK 3 L TENSOR REMARK 3 L11: 2.4624 L22: 4.6106 REMARK 3 L33: 4.5948 L12: 0.4961 REMARK 3 L13: 0.7245 L23: 4.5854 REMARK 3 S TENSOR REMARK 3 S11: -0.0913 S12: -0.2880 S13: -0.6332 REMARK 3 S21: 0.4061 S22: -0.0399 S23: 0.9625 REMARK 3 S31: 0.7646 S32: -0.5068 S33: 0.1620 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 932 THROUGH 944 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2137 14.4830 -13.0644 REMARK 3 T TENSOR REMARK 3 T11: 0.2451 T22: 0.4577 REMARK 3 T33: 0.5522 T12: 0.0647 REMARK 3 T13: -0.0057 T23: 0.1360 REMARK 3 L TENSOR REMARK 3 L11: 0.2323 L22: 2.8007 REMARK 3 L33: 8.2576 L12: 0.8060 REMARK 3 L13: -0.7239 L23: -2.9046 REMARK 3 S TENSOR REMARK 3 S11: 0.0557 S12: 0.2565 S13: 0.3403 REMARK 3 S21: -0.1377 S22: -0.0940 S23: 0.9392 REMARK 3 S31: -0.3397 S32: -0.6490 S33: -0.0978 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 795 THROUGH 803 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2806 21.2342 -28.8666 REMARK 3 T TENSOR REMARK 3 T11: 0.3691 T22: 0.4366 REMARK 3 T33: 0.5067 T12: 0.0168 REMARK 3 T13: -0.0504 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 7.7847 L22: 2.3028 REMARK 3 L33: 3.7099 L12: 2.6753 REMARK 3 L13: -3.6853 L23: -0.2854 REMARK 3 S TENSOR REMARK 3 S11: -0.3750 S12: 0.2690 S13: -0.0361 REMARK 3 S21: -0.3379 S22: 0.0867 S23: 0.9130 REMARK 3 S31: 0.3071 S32: -0.8001 S33: 0.0413 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 804 THROUGH 809 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6203 22.7627 -37.6190 REMARK 3 T TENSOR REMARK 3 T11: 0.6272 T22: 0.4796 REMARK 3 T33: 0.3624 T12: 0.0830 REMARK 3 T13: -0.1028 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 4.1317 L22: 1.9621 REMARK 3 L33: 3.8554 L12: -1.3922 REMARK 3 L13: 2.2572 L23: 0.1896 REMARK 3 S TENSOR REMARK 3 S11: 0.6409 S12: 0.9051 S13: -0.2768 REMARK 3 S21: -1.4850 S22: -0.3589 S23: 0.3273 REMARK 3 S31: 0.5947 S32: 0.2211 S33: -0.2806 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 810 THROUGH 827 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5220 33.3011 -23.1146 REMARK 3 T TENSOR REMARK 3 T11: 0.3105 T22: 0.3384 REMARK 3 T33: 0.3379 T12: 0.0551 REMARK 3 T13: -0.0598 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 2.2816 L22: 3.0786 REMARK 3 L33: 2.8315 L12: 0.5587 REMARK 3 L13: 1.7945 L23: 2.4302 REMARK 3 S TENSOR REMARK 3 S11: -0.1345 S12: -0.0563 S13: 0.3252 REMARK 3 S21: -0.2658 S22: -0.1528 S23: 0.1760 REMARK 3 S31: -0.3940 S32: -0.4887 S33: 0.2821 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 828 THROUGH 868 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.4979 28.9528 -22.9021 REMARK 3 T TENSOR REMARK 3 T11: 0.2971 T22: 0.2814 REMARK 3 T33: 0.3216 T12: 0.0345 REMARK 3 T13: -0.0194 T23: 0.0537 REMARK 3 L TENSOR REMARK 3 L11: 3.3882 L22: 2.5524 REMARK 3 L33: 5.0063 L12: -0.3205 REMARK 3 L13: 0.9907 L23: -0.1369 REMARK 3 S TENSOR REMARK 3 S11: 0.0214 S12: 0.3526 S13: 0.3380 REMARK 3 S21: -0.1080 S22: -0.0244 S23: -0.0927 REMARK 3 S31: -0.2353 S32: -0.0236 S33: 0.0426 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 869 THROUGH 887 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8662 22.4132 -22.4599 REMARK 3 T TENSOR REMARK 3 T11: 0.2278 T22: 0.2860 REMARK 3 T33: 0.2203 T12: 0.0215 REMARK 3 T13: -0.0032 T23: 0.0278 REMARK 3 L TENSOR REMARK 3 L11: 5.4652 L22: 3.9647 REMARK 3 L33: 4.1999 L12: -0.0636 REMARK 3 L13: -0.4198 L23: -1.1038 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: 0.6154 S13: 0.0488 REMARK 3 S21: -0.2059 S22: -0.0784 S23: -0.1311 REMARK 3 S31: 0.1601 S32: 0.1639 S33: 0.0955 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 888 THROUGH 906 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1246 27.8255 -24.8287 REMARK 3 T TENSOR REMARK 3 T11: 0.2884 T22: 0.4723 REMARK 3 T33: 0.3789 T12: 0.0036 REMARK 3 T13: 0.0355 T23: 0.1827 REMARK 3 L TENSOR REMARK 3 L11: 1.7689 L22: 4.3802 REMARK 3 L33: 2.6276 L12: 0.1569 REMARK 3 L13: -0.6962 L23: -0.4736 REMARK 3 S TENSOR REMARK 3 S11: 0.0790 S12: 0.7914 S13: 0.7050 REMARK 3 S21: -0.2630 S22: -0.3005 S23: -0.3149 REMARK 3 S31: -0.6193 S32: 0.3621 S33: 0.1263 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 907 THROUGH 922 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0404 17.8062 -20.7310 REMARK 3 T TENSOR REMARK 3 T11: 0.2432 T22: 0.2817 REMARK 3 T33: 0.2337 T12: 0.0423 REMARK 3 T13: 0.0095 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 3.8630 L22: 3.4682 REMARK 3 L33: 9.0658 L12: -0.3899 REMARK 3 L13: -0.2457 L23: 1.1254 REMARK 3 S TENSOR REMARK 3 S11: 0.1072 S12: 0.3227 S13: -0.0616 REMARK 3 S21: -0.0434 S22: -0.1219 S23: -0.1903 REMARK 3 S31: 0.5162 S32: 0.5212 S33: 0.1123 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 923 THROUGH 931 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1353 21.7128 -31.7603 REMARK 3 T TENSOR REMARK 3 T11: 0.5406 T22: 0.8372 REMARK 3 T33: 0.4570 T12: 0.0120 REMARK 3 T13: 0.0985 T23: 0.1143 REMARK 3 L TENSOR REMARK 3 L11: 9.1076 L22: 9.2637 REMARK 3 L33: 7.6635 L12: 5.9185 REMARK 3 L13: 3.5631 L23: 5.2565 REMARK 3 S TENSOR REMARK 3 S11: -0.2648 S12: 1.6510 S13: -0.0840 REMARK 3 S21: -0.4688 S22: -0.3134 S23: -0.2181 REMARK 3 S31: -0.0710 S32: 0.5973 S33: 0.5671 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 932 THROUGH 946 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7386 17.5793 -17.9443 REMARK 3 T TENSOR REMARK 3 T11: 0.3832 T22: 0.7376 REMARK 3 T33: 0.4992 T12: -0.0367 REMARK 3 T13: -0.0025 T23: 0.1130 REMARK 3 L TENSOR REMARK 3 L11: 1.6000 L22: 7.9061 REMARK 3 L33: 2.0909 L12: -1.8519 REMARK 3 L13: 0.5967 L23: -1.6176 REMARK 3 S TENSOR REMARK 3 S11: 0.1594 S12: 0.3162 S13: 0.1073 REMARK 3 S21: 0.0617 S22: -0.3488 S23: -0.7131 REMARK 3 S31: 0.4011 S32: 0.4207 S33: 0.2523 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V4R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226819. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : CU FINE FOCUS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS HTC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28525 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 33.895 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.0 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 2.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4ZC4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.5 AND 10% PEG 6000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.08150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 785 REMARK 465 HIS A 786 REMARK 465 SER A 787 REMARK 465 GLY A 788 REMARK 465 GLY A 789 REMARK 465 GLY A 790 REMARK 465 GLY A 791 REMARK 465 GLY A 792 REMARK 465 GLY A 793 REMARK 465 ASP A 946 REMARK 465 GLY B 785 REMARK 465 HIS B 786 REMARK 465 SER B 787 REMARK 465 GLY B 788 REMARK 465 GLY B 789 REMARK 465 GLY B 790 REMARK 465 GLY B 791 REMARK 465 GLY B 792 REMARK 465 GLY B 793 REMARK 465 HIS B 794 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 887 CG CD CE NZ REMARK 470 ARG A 942 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 943 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 825 CG CD CE NZ REMARK 470 LYS B 853 CG CD CE NZ REMARK 470 LYS B 926 CG CD CE NZ REMARK 470 LYS B 940 CG CD CE NZ REMARK 470 ARG B 942 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 945 CG CD OE1 OE2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MGT A 1001 DBREF 5V4R A 796 946 UNP Q6PKG0 LARP1_HUMAN 873 1023 DBREF 5V4R B 796 946 UNP Q6PKG0 LARP1_HUMAN 873 1023 SEQADV 5V4R GLY A 785 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R HIS A 786 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R SER A 787 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY A 788 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY A 789 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY A 790 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY A 791 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY A 792 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY A 793 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R HIS A 794 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R MET A 795 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY B 785 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R HIS B 786 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R SER B 787 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY B 788 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY B 789 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY B 790 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY B 791 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY B 792 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R GLY B 793 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R HIS B 794 UNP Q6PKG0 EXPRESSION TAG SEQADV 5V4R MET B 795 UNP Q6PKG0 EXPRESSION TAG SEQRES 1 A 162 GLY HIS SER GLY GLY GLY GLY GLY GLY HIS MET GLN HIS SEQRES 2 A 162 PRO SER HIS GLU LEU LEU LYS GLU ASN GLY PHE THR GLN SEQRES 3 A 162 HIS VAL TYR HIS LYS TYR ARG ARG ARG CYS LEU ASN GLU SEQRES 4 A 162 ARG LYS ARG LEU GLY ILE GLY GLN SER GLN GLU MET ASN SEQRES 5 A 162 THR LEU PHE ARG PHE TRP SER PHE PHE LEU ARG ASP HIS SEQRES 6 A 162 PHE ASN LYS LYS MET TYR GLU GLU PHE LYS GLN LEU ALA SEQRES 7 A 162 LEU GLU ASP ALA LYS GLU GLY TYR ARG TYR GLY LEU GLU SEQRES 8 A 162 CYS LEU PHE ARG TYR TYR SER TYR GLY LEU GLU LYS LYS SEQRES 9 A 162 PHE ARG LEU ASP ILE PHE LYS ASP PHE GLN GLU GLU THR SEQRES 10 A 162 VAL LYS ASP TYR GLU ALA GLY GLN LEU TYR GLY LEU GLU SEQRES 11 A 162 LYS PHE TRP ALA PHE LEU LYS TYR SER LYS ALA LYS ASN SEQRES 12 A 162 LEU ASP ILE ASP PRO LYS LEU GLN GLU TYR LEU GLY LYS SEQRES 13 A 162 PHE ARG ARG LEU GLU ASP SEQRES 1 B 162 GLY HIS SER GLY GLY GLY GLY GLY GLY HIS MET GLN HIS SEQRES 2 B 162 PRO SER HIS GLU LEU LEU LYS GLU ASN GLY PHE THR GLN SEQRES 3 B 162 HIS VAL TYR HIS LYS TYR ARG ARG ARG CYS LEU ASN GLU SEQRES 4 B 162 ARG LYS ARG LEU GLY ILE GLY GLN SER GLN GLU MET ASN SEQRES 5 B 162 THR LEU PHE ARG PHE TRP SER PHE PHE LEU ARG ASP HIS SEQRES 6 B 162 PHE ASN LYS LYS MET TYR GLU GLU PHE LYS GLN LEU ALA SEQRES 7 B 162 LEU GLU ASP ALA LYS GLU GLY TYR ARG TYR GLY LEU GLU SEQRES 8 B 162 CYS LEU PHE ARG TYR TYR SER TYR GLY LEU GLU LYS LYS SEQRES 9 B 162 PHE ARG LEU ASP ILE PHE LYS ASP PHE GLN GLU GLU THR SEQRES 10 B 162 VAL LYS ASP TYR GLU ALA GLY GLN LEU TYR GLY LEU GLU SEQRES 11 B 162 LYS PHE TRP ALA PHE LEU LYS TYR SER LYS ALA LYS ASN SEQRES 12 B 162 LEU ASP ILE ASP PRO LYS LEU GLN GLU TYR LEU GLY LYS SEQRES 13 B 162 PHE ARG ARG LEU GLU ASP HET MGT A1001 98 HETNAM MGT 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE FORMUL 3 MGT C11 H20 N5 O14 P3 FORMUL 4 HOH *175(H2 O) HELIX 1 AA1 HIS A 797 LEU A 803 1 7 HELIX 2 AA2 THR A 809 GLY A 828 1 20 HELIX 3 AA3 SER A 832 HIS A 849 1 18 HELIX 4 AA4 ASN A 851 GLY A 869 1 19 HELIX 5 AA5 ARG A 871 LYS A 888 1 18 HELIX 6 AA6 ARG A 890 ALA A 907 1 18 HELIX 7 AA7 LEU A 910 SER A 923 1 14 HELIX 8 AA8 ASP A 931 GLU A 945 1 15 HELIX 9 AA9 HIS B 797 LYS B 804 1 8 HELIX 10 AB1 THR B 809 GLY B 828 1 20 HELIX 11 AB2 SER B 832 HIS B 849 1 18 HELIX 12 AB3 ASN B 851 GLU B 868 1 18 HELIX 13 AB4 ARG B 871 LYS B 888 1 18 HELIX 14 AB5 ARG B 890 ALA B 907 1 18 HELIX 15 AB6 LEU B 910 SER B 923 1 14 HELIX 16 AB7 ASP B 931 LEU B 938 1 8 HELIX 17 AB8 LEU B 938 GLU B 945 1 8 SITE 1 AC1 17 SER A 882 TYR A 883 GLU A 886 TYR A 911 SITE 2 AC1 17 LYS A 915 ALA A 918 TYR A 922 HOH A1101 SITE 3 AC1 17 ARG B 879 SER B 882 TYR B 883 GLU B 886 SITE 4 AC1 17 TYR B 911 LYS B 915 ALA B 918 TYR B 922 SITE 5 AC1 17 HOH B1023 CRYST1 48.177 60.163 60.609 90.00 101.28 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020757 0.000000 0.004141 0.00000 SCALE2 0.000000 0.016622 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016824 0.00000