HEADER LIGASE 21-MAR-17 5V83 TITLE STRUCTURE OF DCN1 BOUND TO NACM-HIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME,DCN1-LIKE PROTEIN 1 CHIMERA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DCUN1 DOMAIN-CONTAINING PROTEIN 1,DEFECTIVE IN CULLIN COMPND 5 NEDDYLATION PROTEIN 1-LIKE PROTEIN 1,SQUAMOUS CELL CARCINOMA-RELATED COMPND 6 ONCOGENE; COMPND 7 EC: 3.2.1.17; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 10665, 9606; SOURCE 5 GENE: E, T4TP126, DCUN1D1, DCUN1L1, RP42, SCCRO; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSF DUET KEYWDS E3 LIGASE, HYDROLASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR R.K.GUY,B.A.SCHULMAN,D.C.SCOTT,J.T.HAMMILL REVDAT 6 04-OCT-23 5V83 1 REMARK REVDAT 5 01-JAN-20 5V83 1 REMARK REVDAT 4 20-SEP-17 5V83 1 REMARK REVDAT 3 06-SEP-17 5V83 1 JRNL REVDAT 2 21-JUN-17 5V83 1 JRNL REVDAT 1 24-MAY-17 5V83 0 JRNL AUTH D.C.SCOTT,J.T.HAMMILL,J.MIN,D.Y.RHEE,M.CONNELLY, JRNL AUTH 2 V.O.SVIDERSKIY,D.BHASIN,Y.CHEN,S.S.ONG,S.C.CHAI,A.N.GOKTUG, JRNL AUTH 3 G.HUANG,J.K.MONDA,J.LOW,H.S.KIM,J.A.PAULO,J.R.CANNON, JRNL AUTH 4 A.A.SHELAT,T.CHEN,I.R.KELSALL,A.F.ALPI,V.PAGALA,X.WANG, JRNL AUTH 5 J.PENG,B.SINGH,J.W.HARPER,B.A.SCHULMAN,R.K.GUY JRNL TITL BLOCKING AN N-TERMINAL ACETYLATION-DEPENDENT PROTEIN JRNL TITL 2 INTERACTION INHIBITS AN E3 LIGASE. JRNL REF NAT. CHEM. BIOL. V. 13 850 2017 JRNL REFN ESSN 1552-4469 JRNL PMID 28581483 JRNL DOI 10.1038/NCHEMBIO.2386 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25383 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7573 - 4.1627 1.00 2708 158 0.1551 0.1911 REMARK 3 2 4.1627 - 3.3043 1.00 2691 144 0.1456 0.2237 REMARK 3 3 3.3043 - 2.8867 1.00 2673 141 0.1818 0.2377 REMARK 3 4 2.8867 - 2.6228 1.00 2676 156 0.1912 0.2335 REMARK 3 5 2.6228 - 2.4348 1.00 2675 158 0.1926 0.2837 REMARK 3 6 2.4348 - 2.2912 1.00 2658 138 0.1894 0.2564 REMARK 3 7 2.2912 - 2.1765 1.00 2680 122 0.1892 0.2379 REMARK 3 8 2.1765 - 2.0817 1.00 2653 137 0.1960 0.2759 REMARK 3 9 2.0817 - 2.0016 0.99 2675 140 0.2183 0.2674 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3015 REMARK 3 ANGLE : 1.268 4068 REMARK 3 CHIRALITY : 0.051 435 REMARK 3 PLANARITY : 0.006 523 REMARK 3 DIHEDRAL : 13.369 1127 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1062 THROUGH 1082 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2055 19.9692 1.9748 REMARK 3 T TENSOR REMARK 3 T11: 0.1377 T22: 0.4896 REMARK 3 T33: 0.3077 T12: 0.0799 REMARK 3 T13: -0.0278 T23: -0.0654 REMARK 3 L TENSOR REMARK 3 L11: 0.3428 L22: 1.2695 REMARK 3 L33: 2.9610 L12: -0.6308 REMARK 3 L13: 0.9277 L23: -1.8204 REMARK 3 S TENSOR REMARK 3 S11: -0.3157 S12: 0.1913 S13: 0.3983 REMARK 3 S21: 0.3748 S22: -0.1656 S23: 0.5150 REMARK 3 S31: -1.0782 S32: -1.3337 S33: -0.1256 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1083 THROUGH 1118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5943 11.6765 -5.0300 REMARK 3 T TENSOR REMARK 3 T11: 0.2773 T22: 0.3855 REMARK 3 T33: 0.2479 T12: -0.0339 REMARK 3 T13: 0.0242 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 0.3629 L22: 0.4408 REMARK 3 L33: 0.4126 L12: -0.3398 REMARK 3 L13: -0.4271 L23: 0.3467 REMARK 3 S TENSOR REMARK 3 S11: 0.0793 S12: 0.1374 S13: 0.2788 REMARK 3 S21: -0.1605 S22: -0.0878 S23: 0.1115 REMARK 3 S31: 0.0169 S32: -0.3574 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1119 THROUGH 1133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8678 14.2995 6.9746 REMARK 3 T TENSOR REMARK 3 T11: 0.3289 T22: 0.4391 REMARK 3 T33: 0.2844 T12: 0.0345 REMARK 3 T13: -0.0231 T23: -0.0619 REMARK 3 L TENSOR REMARK 3 L11: 0.1530 L22: 0.1771 REMARK 3 L33: 0.3458 L12: -0.1983 REMARK 3 L13: -0.2268 L23: 0.2618 REMARK 3 S TENSOR REMARK 3 S11: -0.1689 S12: -0.4636 S13: 0.4506 REMARK 3 S21: 0.5770 S22: 0.0563 S23: 0.1444 REMARK 3 S31: 0.3330 S32: -0.1876 S33: -0.0041 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1134 THROUGH 1165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7333 4.4680 -0.6074 REMARK 3 T TENSOR REMARK 3 T11: 0.2796 T22: 0.4290 REMARK 3 T33: 0.2938 T12: 0.0478 REMARK 3 T13: 0.0211 T23: 0.0269 REMARK 3 L TENSOR REMARK 3 L11: 0.4538 L22: 1.1972 REMARK 3 L33: 1.6847 L12: -0.2284 REMARK 3 L13: -0.6742 L23: 1.1288 REMARK 3 S TENSOR REMARK 3 S11: -0.2204 S12: -0.5924 S13: 0.1583 REMARK 3 S21: 0.5548 S22: -0.1354 S23: 0.1276 REMARK 3 S31: 0.5514 S32: 0.3824 S33: -0.2454 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1166 THROUGH 1202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6664 -3.9948 -16.1186 REMARK 3 T TENSOR REMARK 3 T11: 0.3298 T22: 0.2323 REMARK 3 T33: 0.2746 T12: 0.0115 REMARK 3 T13: 0.0712 T23: -0.0281 REMARK 3 L TENSOR REMARK 3 L11: 0.2723 L22: 0.9621 REMARK 3 L33: 0.6164 L12: 0.0136 REMARK 3 L13: -0.0391 L23: 0.1514 REMARK 3 S TENSOR REMARK 3 S11: -0.0839 S12: -0.0317 S13: -0.2200 REMARK 3 S21: -0.1284 S22: -0.1877 S23: 0.2418 REMARK 3 S31: 0.0580 S32: 0.1086 S33: -0.0257 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1203 THROUGH 1222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6981 -11.1491 -11.5001 REMARK 3 T TENSOR REMARK 3 T11: 0.3605 T22: 0.2218 REMARK 3 T33: 0.4017 T12: -0.0440 REMARK 3 T13: 0.1979 T23: 0.0278 REMARK 3 L TENSOR REMARK 3 L11: 0.4396 L22: 1.5337 REMARK 3 L33: 1.2320 L12: -0.2451 REMARK 3 L13: -0.5847 L23: 1.1010 REMARK 3 S TENSOR REMARK 3 S11: -0.4585 S12: 0.1428 S13: -0.7375 REMARK 3 S21: 0.4083 S22: -0.1764 S23: 0.4990 REMARK 3 S31: 0.5948 S32: -0.0939 S33: -0.5394 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1223 THROUGH 1252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1946 -17.4367 -17.3071 REMARK 3 T TENSOR REMARK 3 T11: 0.5643 T22: 0.3040 REMARK 3 T33: 0.5947 T12: 0.0603 REMARK 3 T13: 0.2439 T23: 0.1143 REMARK 3 L TENSOR REMARK 3 L11: 0.8765 L22: 0.4563 REMARK 3 L33: 0.3594 L12: -0.4543 REMARK 3 L13: -0.5438 L23: 0.4153 REMARK 3 S TENSOR REMARK 3 S11: -0.5379 S12: -0.0152 S13: -1.2572 REMARK 3 S21: -0.3662 S22: -0.2471 S23: -0.4960 REMARK 3 S31: 0.4899 S32: 0.2058 S33: -0.4393 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -11 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8791 10.5987 24.2009 REMARK 3 T TENSOR REMARK 3 T11: 0.1855 T22: 0.2475 REMARK 3 T33: 0.3576 T12: 0.0196 REMARK 3 T13: -0.0407 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.0825 L22: 0.1760 REMARK 3 L33: 0.5519 L12: 0.0340 REMARK 3 L13: 0.0550 L23: 0.3389 REMARK 3 S TENSOR REMARK 3 S11: -0.2354 S12: -0.1448 S13: -0.3310 REMARK 3 S21: -0.2693 S22: -0.0102 S23: 0.2495 REMARK 3 S31: -0.1352 S32: 0.0088 S33: -0.0323 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2019 -5.8427 16.6516 REMARK 3 T TENSOR REMARK 3 T11: 0.4199 T22: 0.2340 REMARK 3 T33: 0.2877 T12: -0.0227 REMARK 3 T13: 0.0195 T23: -0.0497 REMARK 3 L TENSOR REMARK 3 L11: 0.3690 L22: 1.0373 REMARK 3 L33: 0.7459 L12: -0.5665 REMARK 3 L13: -0.1836 L23: 0.2124 REMARK 3 S TENSOR REMARK 3 S11: -0.0039 S12: 0.0612 S13: -0.2576 REMARK 3 S21: -0.5262 S22: -0.0456 S23: -0.1177 REMARK 3 S31: 0.3816 S32: -0.0754 S33: -0.0013 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3373 3.8663 28.6709 REMARK 3 T TENSOR REMARK 3 T11: 0.2543 T22: 0.2415 REMARK 3 T33: 0.1768 T12: -0.0106 REMARK 3 T13: -0.0496 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.0636 L22: 0.7364 REMARK 3 L33: 0.1654 L12: 0.0165 REMARK 3 L13: -0.0656 L23: 0.0986 REMARK 3 S TENSOR REMARK 3 S11: 0.0110 S12: -0.1706 S13: -0.2852 REMARK 3 S21: 0.1362 S22: 0.0090 S23: 0.1068 REMARK 3 S31: 0.0272 S32: -0.4248 S33: -0.0001 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9586 13.1630 33.9129 REMARK 3 T TENSOR REMARK 3 T11: 0.2037 T22: 0.2072 REMARK 3 T33: 0.1916 T12: -0.0279 REMARK 3 T13: -0.0260 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 0.1893 L22: 0.2893 REMARK 3 L33: 0.3801 L12: 0.0777 REMARK 3 L13: -0.3332 L23: -0.2207 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: -0.0476 S13: 0.0478 REMARK 3 S21: 0.3168 S22: -0.2001 S23: -0.0024 REMARK 3 S31: -0.2118 S32: 0.1747 S33: -0.0057 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4431 22.1207 37.6904 REMARK 3 T TENSOR REMARK 3 T11: 0.3635 T22: 0.3643 REMARK 3 T33: 0.3540 T12: -0.1213 REMARK 3 T13: -0.0987 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.2475 L22: 0.1441 REMARK 3 L33: 1.3303 L12: 0.1193 REMARK 3 L13: -0.2388 L23: -0.4230 REMARK 3 S TENSOR REMARK 3 S11: -0.0777 S12: -0.3066 S13: 0.7586 REMARK 3 S21: 0.7171 S22: -0.3144 S23: -0.2469 REMARK 3 S31: -0.1293 S32: 0.5521 S33: -0.0894 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3446 21.6469 24.0192 REMARK 3 T TENSOR REMARK 3 T11: 0.2318 T22: 0.2147 REMARK 3 T33: 0.2862 T12: -0.0373 REMARK 3 T13: -0.0319 T23: 0.0436 REMARK 3 L TENSOR REMARK 3 L11: 0.2530 L22: 0.7068 REMARK 3 L33: 0.8349 L12: 0.1355 REMARK 3 L13: 0.5772 L23: 0.0725 REMARK 3 S TENSOR REMARK 3 S11: 0.1328 S12: 0.1764 S13: 0.2957 REMARK 3 S21: -0.1167 S22: -0.0862 S23: -0.1234 REMARK 3 S31: -0.2983 S32: 0.1772 S33: -0.0006 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V83 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000227026. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25413 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.61500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: RESIDUES 65-250 OF CHAIN A FROM 3TDU AND RESIDUES REMARK 200 6-158 FROM 2LZM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% PEG3350, 0.2M NH4BR, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.64000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 GLY A 1169 REMARK 465 GLN A 1170 REMARK 465 LYS A 1171 REMARK 465 GLY A 1253 REMARK 465 THR A 1254 REMARK 465 LYS A 1255 REMARK 465 SER A 1256 REMARK 465 THR A 1257 REMARK 465 THR A 1258 REMARK 465 VAL A 1259 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A1062 CG CD NE CZ NH1 NH2 REMARK 470 GLN A1076 CG CD OE1 NE2 REMARK 470 GLN A1120 CG CD OE1 NE2 REMARK 470 GLU A1135 CG CD OE1 OE2 REMARK 470 LYS A1205 CG CD CE NZ REMARK 470 ARG A1206 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1232 CG CD OE1 OE2 REMARK 470 GLU A1233 CG CD OE1 OE2 REMARK 470 ILE A1251 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 596 O HOH A 754 1.38 REMARK 500 OD1 ASN A 53 O HOH A 501 1.85 REMARK 500 O HOH A 746 O HOH A 763 1.88 REMARK 500 O HOH A 764 O HOH A 772 1.91 REMARK 500 O HOH A 756 O HOH A 771 1.93 REMARK 500 O HOH A 651 O HOH A 759 1.98 REMARK 500 O HOH A 659 O HOH A 733 2.03 REMARK 500 O ALA A 82 O HOH A 502 2.03 REMARK 500 OD2 ASP A 1225 O HOH A 503 2.06 REMARK 500 O HOH A 789 O HOH A 791 2.14 REMARK 500 OG1 THR A 1212 O HOH A 504 2.14 REMARK 500 O HOH A 504 O HOH A 753 2.15 REMARK 500 O HOH A 522 O HOH A 592 2.15 REMARK 500 O HOH A 607 O HOH A 767 2.16 REMARK 500 SD MET A 1222 O HOH A 703 2.16 REMARK 500 OD1 ASN A 55 O HOH A 505 2.17 REMARK 500 O 8Z7 A 401 O HOH A 506 2.18 REMARK 500 O HOH A 563 O HOH A 780 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 615 O HOH A 769 1554 1.98 REMARK 500 O HOH A 611 O HOH A 684 1455 2.07 REMARK 500 O HOH A 548 O HOH A 715 2645 2.14 REMARK 500 O HOH A 700 O HOH A 732 1655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 793 DISTANCE = 6.29 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8Z7 A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5V86 RELATED DB: PDB REMARK 900 RELATED ID: 5V88 RELATED DB: PDB REMARK 900 RELATED ID: 5V89 RELATED DB: PDB DBREF 5V83 A 1 164 UNP D9IEF7 D9IEF7_BPT4 1 164 DBREF 5V83 A 1062 1259 UNP Q96GG9 DCNL1_HUMAN 62 259 SEQADV 5V83 MET A -21 UNP D9IEF7 INITIATING METHIONINE SEQADV 5V83 GLY A -20 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 SER A -19 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 SER A -18 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 HIS A -17 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 HIS A -16 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 HIS A -15 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 HIS A -14 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 HIS A -13 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 HIS A -12 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 SER A -11 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 GLN A -10 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 ASP A -9 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 LEU A -8 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 GLU A -7 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 ASN A -6 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 LEU A -5 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 TYR A -4 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 PHE A -3 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 GLN A -2 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 GLY A -1 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 SER A 0 UNP D9IEF7 EXPRESSION TAG SEQADV 5V83 THR A 54 UNP D9IEF7 CYS 54 CONFLICT SEQADV 5V83 ALA A 97 UNP D9IEF7 CYS 97 CONFLICT SEQADV 5V83 THR A 146 UNP D9IEF7 ALA 146 CONFLICT SEQRES 1 A 384 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 384 LEU GLU ASN LEU TYR PHE GLN GLY SER MET ASN ILE PHE SEQRES 3 A 384 GLU MET LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS ILE SEQRES 4 A 384 TYR LYS ASP THR GLU GLY TYR TYR THR ILE GLY ILE GLY SEQRES 5 A 384 HIS LEU LEU THR LYS SER PRO SER LEU ASN ALA ALA LYS SEQRES 6 A 384 SER GLU LEU ASP LYS ALA ILE GLY ARG ASN THR ASN GLY SEQRES 7 A 384 VAL ILE THR LYS ASP GLU ALA GLU LYS LEU PHE ASN GLN SEQRES 8 A 384 ASP VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN ALA SEQRES 9 A 384 LYS LEU LYS PRO VAL TYR ASP SER LEU ASP ALA VAL ARG SEQRES 10 A 384 ARG ALA ALA LEU ILE ASN MET VAL PHE GLN MET GLY GLU SEQRES 11 A 384 THR GLY VAL ALA GLY PHE THR ASN SER LEU ARG MET LEU SEQRES 12 A 384 GLN GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU ALA SEQRES 13 A 384 LYS SER ARG TRP TYR ASN GLN THR PRO ASN ARG THR LYS SEQRES 14 A 384 ARG VAL ILE THR THR PHE ARG THR GLY THR TRP ASP ALA SEQRES 15 A 384 TYR LYS ASN LEU ARG LYS LYS LEU GLU GLN LEU TYR ASN SEQRES 16 A 384 ARG TYR LYS ASP PRO GLN ASP GLU ASN LYS ILE GLY ILE SEQRES 17 A 384 ASP GLY ILE GLN GLN PHE CYS ASP ASP LEU ALA LEU ASP SEQRES 18 A 384 PRO ALA SER ILE SER VAL LEU ILE ILE ALA TRP LYS PHE SEQRES 19 A 384 ARG ALA ALA THR GLN CYS GLU PHE SER LYS GLN GLU PHE SEQRES 20 A 384 MET ASP GLY MET THR GLU LEU GLY CYS ASP SER ILE GLU SEQRES 21 A 384 LYS LEU LYS ALA GLN ILE PRO LYS MET GLU GLN GLU LEU SEQRES 22 A 384 LYS GLU PRO GLY ARG PHE LYS ASP PHE TYR GLN PHE THR SEQRES 23 A 384 PHE ASN PHE ALA LYS ASN PRO GLY GLN LYS GLY LEU ASP SEQRES 24 A 384 LEU GLU MET ALA ILE ALA TYR TRP ASN LEU VAL LEU ASN SEQRES 25 A 384 GLY ARG PHE LYS PHE LEU ASP LEU TRP ASN LYS PHE LEU SEQRES 26 A 384 LEU GLU HIS HIS LYS ARG SER ILE PRO LYS ASP THR TRP SEQRES 27 A 384 ASN LEU LEU LEU ASP PHE SER THR MET ILE ALA ASP ASP SEQRES 28 A 384 MET SER ASN TYR ASP GLU GLU GLY ALA TRP PRO VAL LEU SEQRES 29 A 384 ILE ASP ASP PHE VAL GLU PHE ALA ARG PRO GLN ILE ALA SEQRES 30 A 384 GLY THR LYS SER THR THR VAL HET 8Z7 A 401 27 HETNAM 8Z7 N-(1-BENZYLPIPERIDIN-4-YL)-N'-[3-(TRIFLUOROMETHYL) HETNAM 2 8Z7 PHENYL]UREA FORMUL 2 8Z7 C20 H22 F3 N3 O FORMUL 3 HOH *293(H2 O) HELIX 1 AA1 ASP A -9 TYR A -4 5 6 HELIX 2 AA2 ASN A 2 GLU A 11 1 10 HELIX 3 AA3 SER A 38 GLY A 51 1 14 HELIX 4 AA4 THR A 59 ASN A 81 1 23 HELIX 5 AA5 LEU A 84 LEU A 91 1 8 HELIX 6 AA6 ASP A 92 GLY A 113 1 22 HELIX 7 AA7 PHE A 114 GLN A 123 1 10 HELIX 8 AA8 ARG A 125 ALA A 134 1 10 HELIX 9 AA9 SER A 136 THR A 142 1 7 HELIX 10 AB1 THR A 142 GLY A 156 1 15 HELIX 11 AB2 TRP A 158 ARG A 1071 1 17 HELIX 12 AB3 GLY A 1082 LEU A 1093 1 12 HELIX 13 AB4 SER A 1099 PHE A 1109 1 11 HELIX 14 AB5 LYS A 1119 GLY A 1130 1 12 HELIX 15 AB6 SER A 1133 LEU A 1148 1 16 HELIX 16 AB7 GLU A 1150 LYS A 1166 1 17 HELIX 17 AB8 ASP A 1174 LEU A 1186 1 13 HELIX 18 AB9 PHE A 1192 HIS A 1203 1 12 HELIX 19 AC1 PRO A 1209 ILE A 1223 1 15 HELIX 20 AC2 PRO A 1237 ALA A 1252 1 16 SHEET 1 AA1 3 ARG A 14 LYS A 19 0 SHEET 2 AA1 3 TYR A 25 GLY A 28 -1 O THR A 26 N TYR A 18 SHEET 3 AA1 3 HIS A 31 LEU A 32 -1 O HIS A 31 N ILE A 27 SHEET 1 AA2 2 LYS A1080 ILE A1081 0 SHEET 2 AA2 2 PHE A1117 SER A1118 -1 O PHE A1117 N ILE A1081 SITE 1 AC1 17 ILE A1086 PHE A1089 PRO A1097 ALA A1098 SITE 2 AC1 17 VAL A1102 ILE A1105 ALA A1106 ALA A1111 SITE 3 AC1 17 THR A1113 GLN A1114 GLU A1116 PHE A1117 SITE 4 AC1 17 PHE A1164 ALA A1180 TYR A1181 LEU A1184 SITE 5 AC1 17 HOH A 506 CRYST1 34.966 97.280 58.148 90.00 104.39 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028599 0.000000 0.007339 0.00000 SCALE2 0.000000 0.010280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017755 0.00000