HEADER HYDROLASE/HYDROLASE INHIBITOR 22-MAR-17 5V8R TITLE SMALL MOLECULE INHIBITOR ABS-143 BOUND TO THE BOTULINUM NEUROTOXIN TITLE 2 SEROTYPE A LIGHT CHAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BOTULINUM NEUROTOXIN TYPE A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 1-424; COMPND 5 SYNONYM: BONT/A,BONTOXILYSIN-A,BOTOX; COMPND 6 EC: 3.4.24.69; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM; SOURCE 3 ORGANISM_TAXID: 1491; SOURCE 4 GENE: BOTA, ATX, BNA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS METALLOPROTEASE, DRUG DESIGN, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.N.ALLEN,N.R.SILVAGGI REVDAT 3 04-OCT-23 5V8R 1 LINK REVDAT 2 02-AUG-17 5V8R 1 JRNL REVDAT 1 26-JUL-17 5V8R 0 JRNL AUTH A.R.JACOBSON,M.ADLER,N.R.SILVAGGI,K.N.ALLEN,G.M.SMITH, JRNL AUTH 2 R.A.FREDENBURG,R.L.STEIN,J.B.PARK,X.FENG,C.B.SHOEMAKER, JRNL AUTH 3 S.S.DESHPANDE,M.C.GOODNOUGH,C.J.MALIZIO,E.A.JOHNSON, JRNL AUTH 4 S.PELLETT,W.H.TEPP,S.TZIPORI JRNL TITL SMALL MOLECULE METALLOPROTEASE INHIBITOR WITH IN VITRO, EX JRNL TITL 2 VIVO AND IN VIVO EFFICACY AGAINST BOTULINUM NEUROTOXIN JRNL TITL 3 SEROTYPE A. JRNL REF TOXICON V. 137 36 2017 JRNL REFN ISSN 1879-3150 JRNL PMID 28698055 JRNL DOI 10.1016/J.TOXICON.2017.06.016 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 2009_02_15_2320_3) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 3 NUMBER OF REFLECTIONS : 67754 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3389 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.4880 - 5.4694 0.93 2799 148 0.1935 0.2010 REMARK 3 2 5.4694 - 4.3457 0.96 2842 150 0.1454 0.1845 REMARK 3 3 4.3457 - 3.7976 0.97 2833 149 0.1515 0.1877 REMARK 3 4 3.7976 - 3.4510 0.98 2894 152 0.1677 0.2154 REMARK 3 5 3.4510 - 3.2040 0.99 2854 150 0.1767 0.2369 REMARK 3 6 3.2040 - 3.0153 0.99 2889 153 0.1877 0.2406 REMARK 3 7 3.0153 - 2.8644 0.99 2875 148 0.1885 0.2121 REMARK 3 8 2.8644 - 2.7398 0.98 2830 150 0.1844 0.2601 REMARK 3 9 2.7398 - 2.6344 0.97 2821 150 0.1726 0.2429 REMARK 3 10 2.6344 - 2.5435 0.97 2830 149 0.1667 0.2142 REMARK 3 11 2.5435 - 2.4640 0.97 2804 148 0.1742 0.2396 REMARK 3 12 2.4640 - 2.3936 0.97 2802 147 0.1771 0.2476 REMARK 3 13 2.3936 - 2.3307 0.97 2791 148 0.1678 0.2371 REMARK 3 14 2.3307 - 2.2738 0.95 2761 147 0.1755 0.2578 REMARK 3 15 2.2738 - 2.2221 0.96 2771 147 0.1699 0.2290 REMARK 3 16 2.2221 - 2.1749 0.95 2730 146 0.1710 0.2209 REMARK 3 17 2.1749 - 2.1314 0.94 2724 141 0.1682 0.2360 REMARK 3 18 2.1314 - 2.0912 0.93 2659 142 0.1792 0.2450 REMARK 3 19 2.0912 - 2.0538 0.90 2631 133 0.1778 0.2457 REMARK 3 20 2.0538 - 2.0190 0.89 2596 136 0.1864 0.2630 REMARK 3 21 2.0190 - 1.9865 0.86 2454 134 0.1971 0.2578 REMARK 3 22 1.9865 - 1.9559 0.82 2391 123 0.2042 0.2371 REMARK 3 23 1.9559 - 1.9271 0.75 2162 106 0.2144 0.2795 REMARK 3 24 1.9271 - 1.9000 0.56 1622 92 0.2088 0.2308 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 55.85 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.000 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 6764 REMARK 3 ANGLE : 1.444 9146 REMARK 3 CHIRALITY : 0.102 993 REMARK 3 PLANARITY : 0.007 1179 REMARK 3 DIHEDRAL : 19.030 2464 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -16.4920 -21.3345 -22.2337 REMARK 3 T TENSOR REMARK 3 T11: 0.2110 T22: 0.0577 REMARK 3 T33: 0.1130 T12: -0.0205 REMARK 3 T13: -0.0742 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 0.5254 L22: 1.1152 REMARK 3 L33: 0.6365 L12: 0.0214 REMARK 3 L13: 0.1712 L23: 0.1359 REMARK 3 S TENSOR REMARK 3 S11: 0.0506 S12: 0.0020 S13: -0.0368 REMARK 3 S21: -0.0448 S22: -0.0442 S23: 0.0122 REMARK 3 S31: 0.0037 S32: -0.0549 S33: -0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V8R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000227053. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0809 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69817 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.32200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3BON REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MIX EQUAL VOLUMES OF 10 MG/ML ENZYME REMARK 280 (20 MM HEPES, PH 7.5, 50 MM NACL) WITH CRYSTALLIZATION SOLUTION REMARK 280 (10%-15% POLYETHYLENE GLYCOL MONOMETHYL ETHER 2000, 0.3 M (NH4) REMARK 280 2HPO4, 50 MM TRIS, PH 8.5), VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.81750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 VAL A 27 REMARK 465 GLY A 28 REMARK 465 GLU A 64 REMARK 465 ALA A 65 REMARK 465 LYS A 66 REMARK 465 GLN A 67 REMARK 465 VAL A 68 REMARK 465 PRO A 69 REMARK 465 VAL A 202 REMARK 465 ASP A 203 REMARK 465 THR A 204 REMARK 465 ASN A 205 REMARK 465 VAL A 245 REMARK 465 ASN A 246 REMARK 465 THR A 247 REMARK 465 ASN A 248 REMARK 465 ALA A 249 REMARK 465 TYR A 250 REMARK 465 TYR A 251 REMARK 465 GLU A 252 REMARK 465 MET A 253 REMARK 465 SER A 254 REMARK 465 GLY A 255 REMARK 465 LEU A 256 REMARK 465 GLU A 257 REMARK 465 THR A 306 REMARK 465 THR A 307 REMARK 465 PHE A 369 REMARK 465 PHE A 419 REMARK 465 THR A 420 REMARK 465 GLY A 421 REMARK 465 LEU A 422 REMARK 465 PHE A 423 REMARK 465 GLU A 424 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 PRO B 63 REMARK 465 GLU B 64 REMARK 465 ALA B 65 REMARK 465 LYS B 66 REMARK 465 GLN B 67 REMARK 465 VAL B 68 REMARK 465 PRO B 69 REMARK 465 LYS B 244 REMARK 465 VAL B 245 REMARK 465 ASN B 246 REMARK 465 THR B 247 REMARK 465 ASN B 248 REMARK 465 ALA B 249 REMARK 465 TYR B 250 REMARK 465 TYR B 251 REMARK 465 GLU B 252 REMARK 465 MET B 253 REMARK 465 SER B 254 REMARK 465 GLY B 255 REMARK 465 LEU B 256 REMARK 465 THR B 306 REMARK 465 LYS B 417 REMARK 465 ASN B 418 REMARK 465 PHE B 419 REMARK 465 THR B 420 REMARK 465 GLY B 421 REMARK 465 LEU B 422 REMARK 465 PHE B 423 REMARK 465 GLU B 424 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 199 OG REMARK 470 GLU A 201 CG CD OE1 OE2 REMARK 470 LYS A 417 CG CD CE NZ REMARK 470 ASN A 418 CG OD1 ND2 REMARK 470 VAL B 27 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 351 NH1 ARG B 363 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 623 O HOH B 605 1545 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A -10 -71.96 -98.50 REMARK 500 VAL A 17 -64.53 -123.43 REMARK 500 PRO A 25 90.42 -49.03 REMARK 500 SER A 157 -143.25 -80.60 REMARK 500 LYS A 371 19.74 -146.54 REMARK 500 ASN A 409 47.75 -98.78 REMARK 500 VAL B 17 -53.91 -124.52 REMARK 500 GLN B 29 12.83 59.34 REMARK 500 LEU B 78 37.88 71.22 REMARK 500 SER B 157 -146.60 -84.60 REMARK 500 ASN B 205 89.49 -159.26 REMARK 500 PRO B 239 1.65 -67.85 REMARK 500 ASN B 368 45.04 -73.71 REMARK 500 ASN B 409 45.49 -96.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 16 VAL A 17 -142.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 223 NE2 REMARK 620 2 HIS A 227 NE2 96.2 REMARK 620 3 GLU A 262 OE1 95.4 98.2 REMARK 620 4 90J A 502 S13 124.6 112.6 123.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 223 NE2 REMARK 620 2 HIS B 227 NE2 94.4 REMARK 620 3 GLU B 262 OE1 137.9 91.3 REMARK 620 4 GLU B 262 OE2 83.8 119.6 57.6 REMARK 620 5 90J B 502 S13 113.5 115.8 101.1 120.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 90J A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 90J B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5V8U RELATED DB: PDB REMARK 900 RELATED ID: 5V8P RELATED DB: PDB DBREF 5V8R A 1 424 UNP P10845 BXA1_CLOBO 1 424 DBREF 5V8R B 1 424 UNP P10845 BXA1_CLOBO 1 424 SEQADV 5V8R MET A -19 UNP P10845 INITIATING METHIONINE SEQADV 5V8R GLY A -18 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER A -17 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER A -16 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS A -15 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS A -14 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS A -13 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS A -12 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS A -11 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS A -10 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER A -9 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER A -8 UNP P10845 EXPRESSION TAG SEQADV 5V8R GLY A -7 UNP P10845 EXPRESSION TAG SEQADV 5V8R LEU A -6 UNP P10845 EXPRESSION TAG SEQADV 5V8R VAL A -5 UNP P10845 EXPRESSION TAG SEQADV 5V8R PRO A -4 UNP P10845 EXPRESSION TAG SEQADV 5V8R ARG A -3 UNP P10845 EXPRESSION TAG SEQADV 5V8R GLY A -2 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER A -1 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS A 0 UNP P10845 EXPRESSION TAG SEQADV 5V8R GLN A 2 UNP P10845 PRO 2 CONFLICT SEQADV 5V8R MET B -19 UNP P10845 INITIATING METHIONINE SEQADV 5V8R GLY B -18 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER B -17 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER B -16 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS B -15 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS B -14 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS B -13 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS B -12 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS B -11 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS B -10 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER B -9 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER B -8 UNP P10845 EXPRESSION TAG SEQADV 5V8R GLY B -7 UNP P10845 EXPRESSION TAG SEQADV 5V8R LEU B -6 UNP P10845 EXPRESSION TAG SEQADV 5V8R VAL B -5 UNP P10845 EXPRESSION TAG SEQADV 5V8R PRO B -4 UNP P10845 EXPRESSION TAG SEQADV 5V8R ARG B -3 UNP P10845 EXPRESSION TAG SEQADV 5V8R GLY B -2 UNP P10845 EXPRESSION TAG SEQADV 5V8R SER B -1 UNP P10845 EXPRESSION TAG SEQADV 5V8R HIS B 0 UNP P10845 EXPRESSION TAG SEQADV 5V8R GLN B 2 UNP P10845 PRO 2 CONFLICT SEQRES 1 A 444 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 444 LEU VAL PRO ARG GLY SER HIS MET GLN PHE VAL ASN LYS SEQRES 3 A 444 GLN PHE ASN TYR LYS ASP PRO VAL ASN GLY VAL ASP ILE SEQRES 4 A 444 ALA TYR ILE LYS ILE PRO ASN VAL GLY GLN MET GLN PRO SEQRES 5 A 444 VAL LYS ALA PHE LYS ILE HIS ASN LYS ILE TRP VAL ILE SEQRES 6 A 444 PRO GLU ARG ASP THR PHE THR ASN PRO GLU GLU GLY ASP SEQRES 7 A 444 LEU ASN PRO PRO PRO GLU ALA LYS GLN VAL PRO VAL SER SEQRES 8 A 444 TYR TYR ASP SER THR TYR LEU SER THR ASP ASN GLU LYS SEQRES 9 A 444 ASP ASN TYR LEU LYS GLY VAL THR LYS LEU PHE GLU ARG SEQRES 10 A 444 ILE TYR SER THR ASP LEU GLY ARG MET LEU LEU THR SER SEQRES 11 A 444 ILE VAL ARG GLY ILE PRO PHE TRP GLY GLY SER THR ILE SEQRES 12 A 444 ASP THR GLU LEU LYS VAL ILE ASP THR ASN CYS ILE ASN SEQRES 13 A 444 VAL ILE GLN PRO ASP GLY SER TYR ARG SER GLU GLU LEU SEQRES 14 A 444 ASN LEU VAL ILE ILE GLY PRO SER ALA ASP ILE ILE GLN SEQRES 15 A 444 PHE GLU CYS LYS SER PHE GLY HIS GLU VAL LEU ASN LEU SEQRES 16 A 444 THR ARG ASN GLY TYR GLY SER THR GLN TYR ILE ARG PHE SEQRES 17 A 444 SER PRO ASP PHE THR PHE GLY PHE GLU GLU SER LEU GLU SEQRES 18 A 444 VAL ASP THR ASN PRO LEU LEU GLY ALA GLY LYS PHE ALA SEQRES 19 A 444 THR ASP PRO ALA VAL THR LEU ALA HIS GLU LEU ILE HIS SEQRES 20 A 444 ALA GLY HIS ARG LEU TYR GLY ILE ALA ILE ASN PRO ASN SEQRES 21 A 444 ARG VAL PHE LYS VAL ASN THR ASN ALA TYR TYR GLU MET SEQRES 22 A 444 SER GLY LEU GLU VAL SER PHE GLU GLU LEU ARG THR PHE SEQRES 23 A 444 GLY GLY HIS ASP ALA LYS PHE ILE ASP SER LEU GLN GLU SEQRES 24 A 444 ASN GLU PHE ARG LEU TYR TYR TYR ASN LYS PHE LYS ASP SEQRES 25 A 444 ILE ALA SER THR LEU ASN LYS ALA LYS SER ILE VAL GLY SEQRES 26 A 444 THR THR ALA SER LEU GLN TYR MET LYS ASN VAL PHE LYS SEQRES 27 A 444 GLU LYS TYR LEU LEU SER GLU ASP THR SER GLY LYS PHE SEQRES 28 A 444 SER VAL ASP LYS LEU LYS PHE ASP LYS LEU TYR LYS MET SEQRES 29 A 444 LEU THR GLU ILE TYR THR GLU ASP ASN PHE VAL LYS PHE SEQRES 30 A 444 PHE LYS VAL LEU ASN ARG LYS THR TYR LEU ASN PHE ASP SEQRES 31 A 444 LYS ALA VAL PHE LYS ILE ASN ILE VAL PRO LYS VAL ASN SEQRES 32 A 444 TYR THR ILE TYR ASP GLY PHE ASN LEU ARG ASN THR ASN SEQRES 33 A 444 LEU ALA ALA ASN PHE ASN GLY GLN ASN THR GLU ILE ASN SEQRES 34 A 444 ASN MET ASN PHE THR LYS LEU LYS ASN PHE THR GLY LEU SEQRES 35 A 444 PHE GLU SEQRES 1 B 444 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 444 LEU VAL PRO ARG GLY SER HIS MET GLN PHE VAL ASN LYS SEQRES 3 B 444 GLN PHE ASN TYR LYS ASP PRO VAL ASN GLY VAL ASP ILE SEQRES 4 B 444 ALA TYR ILE LYS ILE PRO ASN VAL GLY GLN MET GLN PRO SEQRES 5 B 444 VAL LYS ALA PHE LYS ILE HIS ASN LYS ILE TRP VAL ILE SEQRES 6 B 444 PRO GLU ARG ASP THR PHE THR ASN PRO GLU GLU GLY ASP SEQRES 7 B 444 LEU ASN PRO PRO PRO GLU ALA LYS GLN VAL PRO VAL SER SEQRES 8 B 444 TYR TYR ASP SER THR TYR LEU SER THR ASP ASN GLU LYS SEQRES 9 B 444 ASP ASN TYR LEU LYS GLY VAL THR LYS LEU PHE GLU ARG SEQRES 10 B 444 ILE TYR SER THR ASP LEU GLY ARG MET LEU LEU THR SER SEQRES 11 B 444 ILE VAL ARG GLY ILE PRO PHE TRP GLY GLY SER THR ILE SEQRES 12 B 444 ASP THR GLU LEU LYS VAL ILE ASP THR ASN CYS ILE ASN SEQRES 13 B 444 VAL ILE GLN PRO ASP GLY SER TYR ARG SER GLU GLU LEU SEQRES 14 B 444 ASN LEU VAL ILE ILE GLY PRO SER ALA ASP ILE ILE GLN SEQRES 15 B 444 PHE GLU CYS LYS SER PHE GLY HIS GLU VAL LEU ASN LEU SEQRES 16 B 444 THR ARG ASN GLY TYR GLY SER THR GLN TYR ILE ARG PHE SEQRES 17 B 444 SER PRO ASP PHE THR PHE GLY PHE GLU GLU SER LEU GLU SEQRES 18 B 444 VAL ASP THR ASN PRO LEU LEU GLY ALA GLY LYS PHE ALA SEQRES 19 B 444 THR ASP PRO ALA VAL THR LEU ALA HIS GLU LEU ILE HIS SEQRES 20 B 444 ALA GLY HIS ARG LEU TYR GLY ILE ALA ILE ASN PRO ASN SEQRES 21 B 444 ARG VAL PHE LYS VAL ASN THR ASN ALA TYR TYR GLU MET SEQRES 22 B 444 SER GLY LEU GLU VAL SER PHE GLU GLU LEU ARG THR PHE SEQRES 23 B 444 GLY GLY HIS ASP ALA LYS PHE ILE ASP SER LEU GLN GLU SEQRES 24 B 444 ASN GLU PHE ARG LEU TYR TYR TYR ASN LYS PHE LYS ASP SEQRES 25 B 444 ILE ALA SER THR LEU ASN LYS ALA LYS SER ILE VAL GLY SEQRES 26 B 444 THR THR ALA SER LEU GLN TYR MET LYS ASN VAL PHE LYS SEQRES 27 B 444 GLU LYS TYR LEU LEU SER GLU ASP THR SER GLY LYS PHE SEQRES 28 B 444 SER VAL ASP LYS LEU LYS PHE ASP LYS LEU TYR LYS MET SEQRES 29 B 444 LEU THR GLU ILE TYR THR GLU ASP ASN PHE VAL LYS PHE SEQRES 30 B 444 PHE LYS VAL LEU ASN ARG LYS THR TYR LEU ASN PHE ASP SEQRES 31 B 444 LYS ALA VAL PHE LYS ILE ASN ILE VAL PRO LYS VAL ASN SEQRES 32 B 444 TYR THR ILE TYR ASP GLY PHE ASN LEU ARG ASN THR ASN SEQRES 33 B 444 LEU ALA ALA ASN PHE ASN GLY GLN ASN THR GLU ILE ASN SEQRES 34 B 444 ASN MET ASN PHE THR LYS LEU LYS ASN PHE THR GLY LEU SEQRES 35 B 444 PHE GLU HET ZN A 501 1 HET 90J A 502 17 HET ZN B 501 1 HET 90J B 502 17 HETNAM ZN ZINC ION HETNAM 90J N-[4-(4-FLUOROPHENYL)-1H-PYRAZOL-3-YL]-2- HETNAM 2 90J SULFANYLACETAMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 90J 2(C11 H10 F N3 O S) FORMUL 7 HOH *345(H2 O) HELIX 1 AA1 THR A 80 SER A 100 1 21 HELIX 2 AA2 THR A 101 GLY A 114 1 14 HELIX 3 AA3 ILE A 130 THR A 132 5 3 HELIX 4 AA4 ASP A 216 TYR A 233 1 18 HELIX 5 AA5 SER A 259 GLY A 267 1 9 HELIX 6 AA6 GLY A 268 ILE A 274 5 7 HELIX 7 AA7 ASP A 275 LYS A 299 1 25 HELIX 8 AA8 SER A 309 LEU A 322 1 14 HELIX 9 AA9 ASP A 334 ILE A 348 1 15 HELIX 10 AB1 THR A 350 LYS A 359 1 10 HELIX 11 AB2 THR A 395 ALA A 399 5 5 HELIX 12 AB3 PHE A 401 ASN A 405 5 5 HELIX 13 AB4 ASN A 409 PHE A 413 5 5 HELIX 14 AB5 THR B 80 SER B 100 1 21 HELIX 15 AB6 THR B 101 GLY B 114 1 14 HELIX 16 AB7 ILE B 130 THR B 132 5 3 HELIX 17 AB8 ASN B 205 GLY B 209 5 5 HELIX 18 AB9 ASP B 216 TYR B 233 1 18 HELIX 19 AC1 SER B 259 GLY B 267 1 9 HELIX 20 AC2 GLY B 268 PHE B 273 5 6 HELIX 21 AC3 ASP B 275 ALA B 300 1 26 HELIX 22 AC4 SER B 309 LEU B 322 1 14 HELIX 23 AC5 ASP B 334 GLU B 347 1 14 HELIX 24 AC6 THR B 350 LYS B 359 1 10 HELIX 25 AC7 PHE B 401 ASN B 405 5 5 HELIX 26 AC8 ASN B 409 PHE B 413 5 5 SHEET 1 AA1 8 TYR A 144 GLU A 148 0 SHEET 2 AA1 8 CYS A 134 ILE A 138 -1 N VAL A 137 O ARG A 145 SHEET 3 AA1 8 ILE A 19 LYS A 23 -1 N TYR A 21 O ILE A 138 SHEET 4 AA1 8 VAL A 33 HIS A 39 -1 O ALA A 35 N ALA A 20 SHEET 5 AA1 8 ILE A 42 ARG A 48 -1 O VAL A 44 N PHE A 36 SHEET 6 AA1 8 LEU A 151 GLY A 155 1 O ILE A 153 N ILE A 45 SHEET 7 AA1 8 GLN A 184 ARG A 187 1 O ILE A 186 N VAL A 152 SHEET 8 AA1 8 GLU A 164 LYS A 166 -1 N LYS A 166 O TYR A 185 SHEET 1 AA2 2 GLU A 126 LEU A 127 0 SHEET 2 AA2 2 SER A 302 ILE A 303 1 O SER A 302 N LEU A 127 SHEET 1 AA3 4 GLY A 211 ALA A 214 0 SHEET 2 AA3 4 PHE A 192 GLU A 198 -1 N PHE A 196 O PHE A 213 SHEET 3 AA3 4 ALA A 372 LYS A 375 -1 O PHE A 374 N THR A 193 SHEET 4 AA3 4 THR A 414 LYS A 415 -1 O THR A 414 N LYS A 375 SHEET 1 AA4 2 SER A 324 GLU A 325 0 SHEET 2 AA4 2 PHE A 331 SER A 332 -1 O SER A 332 N SER A 324 SHEET 1 AA5 8 TYR B 144 GLU B 148 0 SHEET 2 AA5 8 CYS B 134 ILE B 138 -1 N VAL B 137 O ARG B 145 SHEET 3 AA5 8 ILE B 19 LYS B 23 -1 N TYR B 21 O ILE B 138 SHEET 4 AA5 8 VAL B 33 HIS B 39 -1 O ALA B 35 N ALA B 20 SHEET 5 AA5 8 ILE B 42 ARG B 48 -1 O VAL B 44 N PHE B 36 SHEET 6 AA5 8 LEU B 151 GLY B 155 1 O ILE B 153 N ILE B 45 SHEET 7 AA5 8 GLN B 184 ARG B 187 1 O ILE B 186 N VAL B 152 SHEET 8 AA5 8 GLU B 164 LYS B 166 -1 N LYS B 166 O TYR B 185 SHEET 1 AA6 2 GLU B 126 LEU B 127 0 SHEET 2 AA6 2 SER B 302 ILE B 303 1 O SER B 302 N LEU B 127 SHEET 1 AA7 4 LYS B 212 ALA B 214 0 SHEET 2 AA7 4 PHE B 192 GLU B 197 -1 N PHE B 196 O PHE B 213 SHEET 3 AA7 4 VAL B 373 LYS B 375 -1 O PHE B 374 N THR B 193 SHEET 4 AA7 4 THR B 414 LYS B 415 -1 O THR B 414 N LYS B 375 SHEET 1 AA8 2 SER B 324 GLU B 325 0 SHEET 2 AA8 2 PHE B 331 SER B 332 -1 O SER B 332 N SER B 324 LINK NE2 HIS A 223 ZN ZN A 501 1555 1555 2.11 LINK NE2 HIS A 227 ZN ZN A 501 1555 1555 2.29 LINK OE1 GLU A 262 ZN ZN A 501 1555 1555 2.30 LINK ZN ZN A 501 S13 90J A 502 1555 1555 2.53 LINK NE2 HIS B 223 ZN ZN B 501 1555 1555 2.09 LINK NE2 HIS B 227 ZN ZN B 501 1555 1555 2.06 LINK OE1 GLU B 262 ZN ZN B 501 1555 1555 2.43 LINK OE2 GLU B 262 ZN ZN B 501 1555 1555 2.10 LINK ZN ZN B 501 S13 90J B 502 1555 1555 2.33 SITE 1 AC1 4 HIS A 223 HIS A 227 GLU A 262 90J A 502 SITE 1 AC2 14 ILE A 161 GLN A 162 PHE A 163 PHE A 194 SITE 2 AC2 14 THR A 220 HIS A 223 GLU A 224 GLU A 262 SITE 3 AC2 14 GLU A 351 ARG A 363 TYR A 366 ZN A 501 SITE 4 AC2 14 HOH A 618 HOH A 744 SITE 1 AC3 4 HIS B 223 HIS B 227 GLU B 262 90J B 502 SITE 1 AC4 12 ILE B 161 PHE B 163 PHE B 194 THR B 220 SITE 2 AC4 12 HIS B 223 GLU B 224 GLU B 262 GLU B 351 SITE 3 AC4 12 ARG B 363 TYR B 366 PHE B 369 ZN B 501 CRYST1 73.534 67.635 98.112 90.00 104.91 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013599 0.000000 0.003620 0.00000 SCALE2 0.000000 0.014785 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010547 0.00000