HEADER TRANSFERASE/TRANSFERASE INHIBITOR 01-APR-17 5VD4 TITLE CRYSTAL STRUCTURE OF HUMAN WEE1 KINASE DOMAIN IN COMPLEX WITH RAC-IV- TITLE 2 016, A MK1775 ANALOUGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: WEE1-LIKE PROTEIN KINASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 291-575; COMPND 5 SYNONYM: WEE1HU,WEE1A KINASE; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: WEE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS KINASE DOMAIN, CELL CYCLE, WEE1, TRANSFERASE, INHIBITOR, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.-Y.ZHU,E.SCHONBRUNN REVDAT 3 04-OCT-23 5VD4 1 REMARK REVDAT 2 11-DEC-19 5VD4 1 REMARK REVDAT 1 04-APR-18 5VD4 0 JRNL AUTH J.-Y.ZHU,E.SCHONBRUNN JRNL TITL STRUCTURAL BASIS OF WEE FAMILY KINASE INHIBITION BY SMALL JRNL TITL 2 MOLECULES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 18103 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 63.2176 - 3.6703 0.99 2945 156 0.1788 0.2176 REMARK 3 2 3.6703 - 2.9132 0.98 2834 149 0.1977 0.2486 REMARK 3 3 2.9132 - 2.5449 0.99 2859 150 0.2332 0.2800 REMARK 3 4 2.5449 - 2.3122 1.00 2857 151 0.2246 0.2586 REMARK 3 5 2.3122 - 2.1465 1.00 2874 151 0.2176 0.2716 REMARK 3 6 2.1465 - 2.0199 0.99 2828 149 0.2313 0.2943 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2181 REMARK 3 ANGLE : 0.928 2943 REMARK 3 CHIRALITY : 0.033 315 REMARK 3 PLANARITY : 0.003 373 REMARK 3 DIHEDRAL : 15.739 811 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 293 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8196 -2.2912 7.4124 REMARK 3 T TENSOR REMARK 3 T11: 0.3246 T22: 0.2596 REMARK 3 T33: 0.3459 T12: 0.0811 REMARK 3 T13: 0.0727 T23: 0.0883 REMARK 3 L TENSOR REMARK 3 L11: 6.0375 L22: 3.9466 REMARK 3 L33: 2.2418 L12: -0.0768 REMARK 3 L13: 0.9199 L23: 1.6346 REMARK 3 S TENSOR REMARK 3 S11: 0.0313 S12: 0.3223 S13: -0.4908 REMARK 3 S21: -0.4921 S22: -0.3949 S23: -0.2292 REMARK 3 S31: 0.2174 S32: 0.0813 S33: 0.0736 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 319 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1948 -4.0772 12.0753 REMARK 3 T TENSOR REMARK 3 T11: 0.2927 T22: 0.2191 REMARK 3 T33: 0.3370 T12: 0.0193 REMARK 3 T13: -0.0205 T23: 0.0659 REMARK 3 L TENSOR REMARK 3 L11: 6.6898 L22: 3.7754 REMARK 3 L33: 1.7006 L12: -1.2202 REMARK 3 L13: 0.2878 L23: 0.4485 REMARK 3 S TENSOR REMARK 3 S11: -0.0432 S12: -0.1181 S13: -0.3574 REMARK 3 S21: -0.2406 S22: 0.2092 S23: 0.3775 REMARK 3 S31: 0.3742 S32: -0.0097 S33: 0.0459 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 332 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5292 -10.5445 9.1373 REMARK 3 T TENSOR REMARK 3 T11: 0.4971 T22: 0.3320 REMARK 3 T33: 0.4110 T12: -0.0093 REMARK 3 T13: -0.0827 T23: -0.1717 REMARK 3 L TENSOR REMARK 3 L11: 2.3733 L22: 3.3098 REMARK 3 L33: 3.6676 L12: 1.0196 REMARK 3 L13: 2.0980 L23: 2.8802 REMARK 3 S TENSOR REMARK 3 S11: 0.1660 S12: 0.1666 S13: -0.3643 REMARK 3 S21: 0.3196 S22: 0.2966 S23: -0.2892 REMARK 3 S31: -0.4032 S32: 0.5054 S33: -0.5875 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 351 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0698 -6.3582 16.0859 REMARK 3 T TENSOR REMARK 3 T11: 0.2650 T22: 0.2245 REMARK 3 T33: 0.1530 T12: 0.0456 REMARK 3 T13: 0.0317 T23: 0.0729 REMARK 3 L TENSOR REMARK 3 L11: 5.4281 L22: 3.9059 REMARK 3 L33: 1.2057 L12: 1.3350 REMARK 3 L13: 2.2246 L23: 1.2594 REMARK 3 S TENSOR REMARK 3 S11: 0.0901 S12: -0.3481 S13: -0.1118 REMARK 3 S21: 0.1696 S22: -0.2247 S23: 0.3013 REMARK 3 S31: 0.1623 S32: 0.2298 S33: -0.1174 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 378 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4312 18.3783 13.9488 REMARK 3 T TENSOR REMARK 3 T11: 0.3527 T22: 0.3103 REMARK 3 T33: 0.6758 T12: 0.0369 REMARK 3 T13: -0.0295 T23: 0.0917 REMARK 3 L TENSOR REMARK 3 L11: 0.9709 L22: 2.2201 REMARK 3 L33: 2.0612 L12: -0.1127 REMARK 3 L13: -1.2986 L23: -0.8659 REMARK 3 S TENSOR REMARK 3 S11: 0.2801 S12: 0.0898 S13: 0.7469 REMARK 3 S21: 0.3566 S22: -0.2068 S23: 0.0395 REMARK 3 S31: -0.5828 S32: 0.0620 S33: -0.2043 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 400 THROUGH 461 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3626 7.6115 22.7581 REMARK 3 T TENSOR REMARK 3 T11: 0.1998 T22: 0.2031 REMARK 3 T33: 0.2409 T12: 0.0215 REMARK 3 T13: 0.0145 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 4.5775 L22: 2.5463 REMARK 3 L33: 3.0650 L12: 0.0093 REMARK 3 L13: -0.1843 L23: 0.2545 REMARK 3 S TENSOR REMARK 3 S11: 0.2129 S12: -0.2452 S13: 0.2209 REMARK 3 S21: 0.1181 S22: -0.1807 S23: 0.1600 REMARK 3 S31: -0.0558 S32: -0.1540 S33: -0.0876 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 462 THROUGH 484 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5629 -0.8571 13.2740 REMARK 3 T TENSOR REMARK 3 T11: 0.4170 T22: 0.3284 REMARK 3 T33: 0.4370 T12: 0.1102 REMARK 3 T13: 0.1047 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.9752 L22: 2.5956 REMARK 3 L33: 1.0446 L12: 0.6761 REMARK 3 L13: 0.5166 L23: 0.0655 REMARK 3 S TENSOR REMARK 3 S11: -0.1013 S12: 0.3038 S13: -0.5265 REMARK 3 S21: -1.0087 S22: -0.2387 S23: -0.4095 REMARK 3 S31: 0.5624 S32: 0.3462 S33: 0.0163 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 485 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3576 10.4736 13.3361 REMARK 3 T TENSOR REMARK 3 T11: 0.2530 T22: 0.2726 REMARK 3 T33: 0.3069 T12: 0.0128 REMARK 3 T13: 0.0302 T23: 0.0581 REMARK 3 L TENSOR REMARK 3 L11: 4.3189 L22: 3.9283 REMARK 3 L33: 2.2066 L12: -0.3204 REMARK 3 L13: -0.8665 L23: 0.7859 REMARK 3 S TENSOR REMARK 3 S11: 0.1956 S12: 0.3389 S13: 0.1699 REMARK 3 S21: -0.3204 S22: -0.0618 S23: -0.2071 REMARK 3 S31: -0.1579 S32: 0.2140 S33: -0.0705 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 528 THROUGH 550 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7540 21.5976 21.4096 REMARK 3 T TENSOR REMARK 3 T11: 0.3395 T22: 0.2228 REMARK 3 T33: 0.6422 T12: -0.0695 REMARK 3 T13: 0.0093 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 1.4049 L22: 4.6576 REMARK 3 L33: 5.8950 L12: -2.1748 REMARK 3 L13: -0.3791 L23: -2.0894 REMARK 3 S TENSOR REMARK 3 S11: 0.3188 S12: -0.2796 S13: 0.8827 REMARK 3 S21: -0.2841 S22: -0.3014 S23: -0.3445 REMARK 3 S31: -0.6528 S32: 0.7827 S33: 0.6882 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 551 THROUGH 571 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4451 10.6985 28.8754 REMARK 3 T TENSOR REMARK 3 T11: 0.1916 T22: 0.4094 REMARK 3 T33: 0.2040 T12: 0.0136 REMARK 3 T13: -0.1350 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 3.1201 L22: 2.0577 REMARK 3 L33: 4.8225 L12: 0.1194 REMARK 3 L13: -1.2474 L23: 1.0322 REMARK 3 S TENSOR REMARK 3 S11: 0.0049 S12: -0.9904 S13: 0.2794 REMARK 3 S21: 0.2570 S22: 0.1917 S23: -0.5601 REMARK 3 S31: 0.2031 S32: 0.5184 S33: 0.3160 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VD4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000227251. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18106 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 63.187 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.554 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.53 REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.860 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5V5Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5.0 MG/ML WEE1, 25 MM NA/K PHOSPHATE, REMARK 280 1 MM DTT, 0.05 M AMMONIUM SULFATE, 0.05 M BIS-TRIS (PH 5.5), 7.5 REMARK 280 % PEG 3350, 1 MM RAC-IV-016, PH 6.9, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.89000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 287 REMARK 465 ALA A 288 REMARK 465 GLY A 289 REMARK 465 SER A 290 REMARK 465 MET A 291 REMARK 465 LYS A 292 REMARK 465 SER A 438 REMARK 465 ILE A 439 REMARK 465 PRO A 440 REMARK 465 ASN A 441 REMARK 465 ALA A 442 REMARK 465 ALA A 443 REMARK 465 SER A 444 REMARK 465 GLU A 445 REMARK 465 GLU A 446 REMARK 465 GLY A 447 REMARK 465 ASP A 448 REMARK 465 GLU A 449 REMARK 465 ASP A 450 REMARK 465 ASP A 451 REMARK 465 TRP A 452 REMARK 465 ALA A 453 REMARK 465 SER A 454 REMARK 465 ASN A 455 REMARK 465 ALA A 572 REMARK 465 SER A 573 REMARK 465 ARG A 574 REMARK 465 LYS A 575 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 337 171.39 -59.20 REMARK 500 MET A 395 48.50 73.89 REMARK 500 ASP A 426 43.47 -147.09 REMARK 500 ASP A 463 72.30 50.10 REMARK 500 SER A 472 60.95 -157.26 REMARK 500 ASN A 519 -168.40 -170.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 99J A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 607 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VC3 RELATED DB: PDB REMARK 900 RELATED ID: 5VC4 RELATED DB: PDB REMARK 900 RELATED ID: 5VC5 RELATED DB: PDB REMARK 900 RELATED ID: 5VD2 RELATED DB: PDB REMARK 900 RELATED ID: 5VC6 RELATED DB: PDB REMARK 900 RELATED ID: 5VD9 RELATED DB: PDB REMARK 900 RELATED ID: 5VD8 RELATED DB: PDB REMARK 900 RELATED ID: 5VD7 RELATED DB: PDB REMARK 900 RELATED ID: 5VD5 RELATED DB: PDB REMARK 900 RELATED ID: 5VDA RELATED DB: PDB DBREF 5VD4 A 291 575 UNP P30291 WEE1_HUMAN 291 575 SEQADV 5VD4 GLY A 287 UNP P30291 EXPRESSION TAG SEQADV 5VD4 ALA A 288 UNP P30291 EXPRESSION TAG SEQADV 5VD4 GLY A 289 UNP P30291 EXPRESSION TAG SEQADV 5VD4 SER A 290 UNP P30291 EXPRESSION TAG SEQRES 1 A 289 GLY ALA GLY SER MET LYS SER ARG TYR THR THR GLU PHE SEQRES 2 A 289 HIS GLU LEU GLU LYS ILE GLY SER GLY GLU PHE GLY SER SEQRES 3 A 289 VAL PHE LYS CYS VAL LYS ARG LEU ASP GLY CYS ILE TYR SEQRES 4 A 289 ALA ILE LYS ARG SER LYS LYS PRO LEU ALA GLY SER VAL SEQRES 5 A 289 ASP GLU GLN ASN ALA LEU ARG GLU VAL TYR ALA HIS ALA SEQRES 6 A 289 VAL LEU GLY GLN HIS SER HIS VAL VAL ARG TYR PHE SER SEQRES 7 A 289 ALA TRP ALA GLU ASP ASP HIS MET LEU ILE GLN ASN GLU SEQRES 8 A 289 TYR CYS ASN GLY GLY SER LEU ALA ASP ALA ILE SER GLU SEQRES 9 A 289 ASN TYR ARG ILE MET SER TYR PHE LYS GLU ALA GLU LEU SEQRES 10 A 289 LYS ASP LEU LEU LEU GLN VAL GLY ARG GLY LEU ARG TYR SEQRES 11 A 289 ILE HIS SER MET SER LEU VAL HIS MET ASP ILE LYS PRO SEQRES 12 A 289 SER ASN ILE PHE ILE SER ARG THR SER ILE PRO ASN ALA SEQRES 13 A 289 ALA SER GLU GLU GLY ASP GLU ASP ASP TRP ALA SER ASN SEQRES 14 A 289 LYS VAL MET PHE LYS ILE GLY ASP LEU GLY HIS VAL THR SEQRES 15 A 289 ARG ILE SER SER PRO GLN VAL GLU GLU GLY ASP SER ARG SEQRES 16 A 289 PHE LEU ALA ASN GLU VAL LEU GLN GLU ASN TYR THR HIS SEQRES 17 A 289 LEU PRO LYS ALA ASP ILE PHE ALA LEU ALA LEU THR VAL SEQRES 18 A 289 VAL CYS ALA ALA GLY ALA GLU PRO LEU PRO ARG ASN GLY SEQRES 19 A 289 ASP GLN TRP HIS GLU ILE ARG GLN GLY ARG LEU PRO ARG SEQRES 20 A 289 ILE PRO GLN VAL LEU SER GLN GLU PHE THR GLU LEU LEU SEQRES 21 A 289 LYS VAL MET ILE HIS PRO ASP PRO GLU ARG ARG PRO SER SEQRES 22 A 289 ALA MET ALA LEU VAL LYS HIS SER VAL LEU LEU SER ALA SEQRES 23 A 289 SER ARG LYS HET 99J A 601 66 HET PO4 A 602 5 HET PO4 A 603 5 HET EDO A 604 10 HET EDO A 605 10 HET EDO A 606 10 HET CL A 607 1 HETNAM 99J 6-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}-2-(PROP-2- HETNAM 2 99J EN-1-YL)-1-{6-[(1S)-2,2,2-TRIFLUORO-1- HETNAM 3 99J HYDROXYETHYL]PYRIDIN-2-YL}-1,2-DIHYDRO-3H-PYRAZOLO[3, HETNAM 4 99J 4-D]PYRIMIDIN-3-ONE HETNAM PO4 PHOSPHATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN 99J RAC-IV-016 HETSYN EDO ETHYLENE GLYCOL FORMUL 2 99J C26 H27 F3 N8 O2 FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 EDO 3(C2 H6 O2) FORMUL 8 CL CL 1- FORMUL 9 HOH *48(H2 O) HELIX 1 AA1 SER A 293 GLU A 298 1 6 HELIX 2 AA2 SER A 337 GLY A 354 1 18 HELIX 3 AA3 SER A 383 ILE A 394 1 12 HELIX 4 AA4 LYS A 399 MET A 420 1 22 HELIX 5 AA5 LYS A 428 SER A 430 5 3 HELIX 6 AA6 ASP A 479 LEU A 483 5 5 HELIX 7 AA7 ALA A 484 GLN A 489 1 6 HELIX 8 AA8 LEU A 495 GLY A 512 1 18 HELIX 9 AA9 ASN A 519 GLN A 528 1 10 HELIX 10 AB1 SER A 539 ILE A 550 1 12 HELIX 11 AB2 ASP A 553 ARG A 557 5 5 HELIX 12 AB3 SER A 559 LYS A 565 1 7 HELIX 13 AB4 HIS A 566 LEU A 570 5 5 SHEET 1 AA1 5 PHE A 299 SER A 307 0 SHEET 2 AA1 5 GLY A 311 LYS A 318 -1 O LYS A 315 N GLU A 303 SHEET 3 AA1 5 ILE A 324 LYS A 331 -1 O ARG A 329 N SER A 312 SHEET 4 AA1 5 HIS A 371 GLU A 377 -1 O MET A 372 N SER A 330 SHEET 5 AA1 5 TYR A 362 GLU A 368 -1 N TRP A 366 O LEU A 373 SHEET 1 AA2 2 LEU A 422 VAL A 423 0 SHEET 2 AA2 2 THR A 468 ARG A 469 -1 O THR A 468 N VAL A 423 SHEET 1 AA3 2 ILE A 432 SER A 435 0 SHEET 2 AA3 2 MET A 458 ILE A 461 -1 O LYS A 460 N PHE A 433 SITE 1 AC1 16 GLU A 303 ILE A 305 GLY A 306 PHE A 310 SITE 2 AC1 16 VAL A 313 ALA A 326 LYS A 328 VAL A 360 SITE 3 AC1 16 ASN A 376 GLU A 377 TYR A 378 CYS A 379 SITE 4 AC1 16 GLY A 382 ASP A 386 PHE A 433 ASP A 463 SITE 1 AC2 4 PRO A 558 SER A 559 ALA A 562 HOH A 701 SITE 1 AC3 3 ASN A 519 GLY A 520 HIS A 524 SITE 1 AC4 2 SER A 430 ARG A 481 SITE 1 AC5 3 HIS A 356 ARG A 412 ARG A 415 SITE 1 AC6 5 GLN A 522 ARG A 530 LEU A 531 PRO A 532 SITE 2 AC6 5 ARG A 533 SITE 1 AC7 1 ARG A 518 CRYST1 50.310 43.780 64.860 90.00 103.04 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019877 0.000000 0.004605 0.00000 SCALE2 0.000000 0.022841 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015826 0.00000