data_5VDC # _entry.id 5VDC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5VDC pdb_00005vdc 10.2210/pdb5vdc/pdb WWPDB D_1000227260 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-24 2 'Structure model' 1 1 2017-06-07 3 'Structure model' 1 2 2017-06-21 4 'Structure model' 1 3 2017-09-27 5 'Structure model' 1 4 2019-11-20 6 'Structure model' 1 5 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Author supporting evidence' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 5 'Structure model' pdbx_audit_support 4 6 'Structure model' chem_comp_atom 5 6 'Structure model' chem_comp_bond 6 6 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.country' 2 3 'Structure model' '_citation.journal_id_ASTM' 3 3 'Structure model' '_citation.journal_id_CSD' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 4 'Structure model' '_pdbx_audit_support.funding_organization' 8 5 'Structure model' '_pdbx_audit_support.funding_organization' 9 6 'Structure model' '_database_2.pdbx_DOI' 10 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VDC _pdbx_database_status.recvd_initial_deposition_date 2017-04-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Huber, F.M.' 1 ? 'Davenport, A.M.' 2 ? 'Hoelz, A.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 114 _citation.language ? _citation.page_first 6016 _citation.page_last 6021 _citation.title 'Histone-binding of DPF2 mediates its repressive role in myeloid differentiation.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1700328114 _citation.pdbx_database_id_PubMed 28533407 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huber, F.M.' 1 ? primary 'Greenblatt, S.M.' 2 ? primary 'Davenport, A.M.' 3 ? primary 'Martinez, C.' 4 ? primary 'Xu, Y.' 5 ? primary 'Vu, L.P.' 6 ? primary 'Nimer, S.D.' 7 ? primary 'Hoelz, A.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Zinc finger protein ubi-d4' 14063.899 1 ? ? 'DPF2 tandem PHD finger domain (UNP residues 270-391)' ? 2 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 5 water nat water 18.015 117 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Apoptosis response zinc finger protein,BRG1-associated factor 45D,BAF45D,D4,zinc and double PHD fingers family 2,Protein requiem' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GMGSNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFC DDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS ; _entity_poly.pdbx_seq_one_letter_code_can ;GMGSNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFC DDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 GLYCEROL GOL 4 1,2-ETHANEDIOL EDO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MET n 1 3 GLY n 1 4 SER n 1 5 ASN n 1 6 ASN n 1 7 TYR n 1 8 CYS n 1 9 ASP n 1 10 PHE n 1 11 CYS n 1 12 LEU n 1 13 GLY n 1 14 ASP n 1 15 SER n 1 16 LYS n 1 17 ILE n 1 18 ASN n 1 19 LYS n 1 20 LYS n 1 21 THR n 1 22 GLY n 1 23 GLN n 1 24 PRO n 1 25 GLU n 1 26 GLU n 1 27 LEU n 1 28 VAL n 1 29 SER n 1 30 CYS n 1 31 SER n 1 32 ASP n 1 33 CYS n 1 34 GLY n 1 35 ARG n 1 36 SER n 1 37 GLY n 1 38 HIS n 1 39 PRO n 1 40 SER n 1 41 CYS n 1 42 LEU n 1 43 GLN n 1 44 PHE n 1 45 THR n 1 46 PRO n 1 47 VAL n 1 48 MET n 1 49 MET n 1 50 ALA n 1 51 ALA n 1 52 VAL n 1 53 LYS n 1 54 THR n 1 55 TYR n 1 56 ARG n 1 57 TRP n 1 58 GLN n 1 59 CYS n 1 60 ILE n 1 61 GLU n 1 62 CYS n 1 63 LYS n 1 64 CYS n 1 65 CYS n 1 66 ASN n 1 67 ILE n 1 68 CYS n 1 69 GLY n 1 70 THR n 1 71 SER n 1 72 GLU n 1 73 ASN n 1 74 ASP n 1 75 ASP n 1 76 GLN n 1 77 LEU n 1 78 LEU n 1 79 PHE n 1 80 CYS n 1 81 ASP n 1 82 ASP n 1 83 CYS n 1 84 ASP n 1 85 ARG n 1 86 GLY n 1 87 TYR n 1 88 HIS n 1 89 MET n 1 90 TYR n 1 91 CYS n 1 92 LEU n 1 93 THR n 1 94 PRO n 1 95 SER n 1 96 MET n 1 97 SER n 1 98 GLU n 1 99 PRO n 1 100 PRO n 1 101 GLU n 1 102 GLY n 1 103 SER n 1 104 TRP n 1 105 SER n 1 106 CYS n 1 107 HIS n 1 108 LEU n 1 109 CYS n 1 110 LEU n 1 111 ASP n 1 112 LEU n 1 113 LEU n 1 114 LYS n 1 115 GLU n 1 116 LYS n 1 117 ALA n 1 118 SER n 1 119 ILE n 1 120 TYR n 1 121 GLN n 1 122 ASN n 1 123 GLN n 1 124 ASN n 1 125 SER n 1 126 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 126 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DPF2, BAF45D, REQ, UBID4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 MET 2 -2 ? ? ? A . n A 1 3 GLY 3 -1 ? ? ? A . n A 1 4 SER 4 0 ? ? ? A . n A 1 5 ASN 5 1 1 ASN ASN A . n A 1 6 ASN 6 2 2 ASN ASN A . n A 1 7 TYR 7 3 3 TYR TYR A . n A 1 8 CYS 8 4 4 CYS CYS A . n A 1 9 ASP 9 5 5 ASP ASP A . n A 1 10 PHE 10 6 6 PHE PHE A . n A 1 11 CYS 11 7 7 CYS CYS A . n A 1 12 LEU 12 8 8 LEU LEU A . n A 1 13 GLY 13 9 9 GLY GLY A . n A 1 14 ASP 14 10 10 ASP ASP A . n A 1 15 SER 15 11 11 SER SER A . n A 1 16 LYS 16 12 12 LYS LYS A . n A 1 17 ILE 17 13 13 ILE ILE A . n A 1 18 ASN 18 14 14 ASN ASN A . n A 1 19 LYS 19 15 15 LYS LYS A . n A 1 20 LYS 20 16 16 LYS LYS A . n A 1 21 THR 21 17 17 THR THR A . n A 1 22 GLY 22 18 18 GLY GLY A . n A 1 23 GLN 23 19 19 GLN GLN A . n A 1 24 PRO 24 20 20 PRO PRO A . n A 1 25 GLU 25 21 21 GLU GLU A . n A 1 26 GLU 26 22 22 GLU GLU A . n A 1 27 LEU 27 23 23 LEU LEU A . n A 1 28 VAL 28 24 24 VAL VAL A . n A 1 29 SER 29 25 25 SER SER A . n A 1 30 CYS 30 26 26 CYS CYS A . n A 1 31 SER 31 27 27 SER SER A . n A 1 32 ASP 32 28 28 ASP ASP A . n A 1 33 CYS 33 29 29 CYS CYS A . n A 1 34 GLY 34 30 30 GLY GLY A . n A 1 35 ARG 35 31 31 ARG ARG A . n A 1 36 SER 36 32 32 SER SER A . n A 1 37 GLY 37 33 33 GLY GLY A . n A 1 38 HIS 38 34 34 HIS HIS A . n A 1 39 PRO 39 35 35 PRO PRO A . n A 1 40 SER 40 36 36 SER SER A . n A 1 41 CYS 41 37 37 CYS CYS A . n A 1 42 LEU 42 38 38 LEU LEU A . n A 1 43 GLN 43 39 39 GLN GLN A . n A 1 44 PHE 44 40 40 PHE PHE A . n A 1 45 THR 45 41 41 THR THR A . n A 1 46 PRO 46 42 42 PRO PRO A . n A 1 47 VAL 47 43 43 VAL VAL A . n A 1 48 MET 48 44 44 MET MET A . n A 1 49 MET 49 45 45 MET MET A . n A 1 50 ALA 50 46 46 ALA ALA A . n A 1 51 ALA 51 47 47 ALA ALA A . n A 1 52 VAL 52 48 48 VAL VAL A . n A 1 53 LYS 53 49 49 LYS LYS A . n A 1 54 THR 54 50 50 THR THR A . n A 1 55 TYR 55 51 51 TYR TYR A . n A 1 56 ARG 56 52 52 ARG ARG A . n A 1 57 TRP 57 53 53 TRP TRP A . n A 1 58 GLN 58 54 54 GLN GLN A . n A 1 59 CYS 59 55 55 CYS CYS A . n A 1 60 ILE 60 56 56 ILE ILE A . n A 1 61 GLU 61 57 57 GLU GLU A . n A 1 62 CYS 62 58 58 CYS CYS A . n A 1 63 LYS 63 59 59 LYS LYS A . n A 1 64 CYS 64 60 60 CYS CYS A . n A 1 65 CYS 65 61 61 CYS CYS A . n A 1 66 ASN 66 62 62 ASN ASN A . n A 1 67 ILE 67 63 63 ILE ILE A . n A 1 68 CYS 68 64 64 CYS CYS A . n A 1 69 GLY 69 65 65 GLY GLY A . n A 1 70 THR 70 66 66 THR THR A . n A 1 71 SER 71 67 67 SER SER A . n A 1 72 GLU 72 68 68 GLU GLU A . n A 1 73 ASN 73 69 69 ASN ASN A . n A 1 74 ASP 74 70 70 ASP ASP A . n A 1 75 ASP 75 71 71 ASP ASP A . n A 1 76 GLN 76 72 72 GLN GLN A . n A 1 77 LEU 77 73 73 LEU LEU A . n A 1 78 LEU 78 74 74 LEU LEU A . n A 1 79 PHE 79 75 75 PHE PHE A . n A 1 80 CYS 80 76 76 CYS CYS A . n A 1 81 ASP 81 77 77 ASP ASP A . n A 1 82 ASP 82 78 78 ASP ASP A . n A 1 83 CYS 83 79 79 CYS CYS A . n A 1 84 ASP 84 80 80 ASP ASP A . n A 1 85 ARG 85 81 81 ARG ARG A . n A 1 86 GLY 86 82 82 GLY GLY A . n A 1 87 TYR 87 83 83 TYR TYR A . n A 1 88 HIS 88 84 84 HIS HIS A . n A 1 89 MET 89 85 85 MET MET A . n A 1 90 TYR 90 86 86 TYR TYR A . n A 1 91 CYS 91 87 87 CYS CYS A . n A 1 92 LEU 92 88 88 LEU LEU A . n A 1 93 THR 93 89 89 THR THR A . n A 1 94 PRO 94 90 90 PRO PRO A . n A 1 95 SER 95 91 91 SER SER A . n A 1 96 MET 96 92 92 MET MET A . n A 1 97 SER 97 93 93 SER SER A . n A 1 98 GLU 98 94 94 GLU GLU A . n A 1 99 PRO 99 95 95 PRO PRO A . n A 1 100 PRO 100 96 96 PRO PRO A . n A 1 101 GLU 101 97 97 GLU GLU A . n A 1 102 GLY 102 98 98 GLY GLY A . n A 1 103 SER 103 99 99 SER SER A . n A 1 104 TRP 104 100 100 TRP TRP A . n A 1 105 SER 105 101 101 SER SER A . n A 1 106 CYS 106 102 102 CYS CYS A . n A 1 107 HIS 107 103 103 HIS HIS A . n A 1 108 LEU 108 104 104 LEU LEU A . n A 1 109 CYS 109 105 105 CYS CYS A . n A 1 110 LEU 110 106 106 LEU LEU A . n A 1 111 ASP 111 107 107 ASP ASP A . n A 1 112 LEU 112 108 108 LEU LEU A . n A 1 113 LEU 113 109 109 LEU LEU A . n A 1 114 LYS 114 110 110 LYS LYS A . n A 1 115 GLU 115 111 111 GLU GLU A . n A 1 116 LYS 116 112 112 LYS LYS A . n A 1 117 ALA 117 113 113 ALA ALA A . n A 1 118 SER 118 114 114 SER SER A . n A 1 119 ILE 119 115 115 ILE ILE A . n A 1 120 TYR 120 116 116 TYR TYR A . n A 1 121 GLN 121 117 117 GLN GLN A . n A 1 122 ASN 122 118 ? ? ? A . n A 1 123 GLN 123 119 ? ? ? A . n A 1 124 ASN 124 120 ? ? ? A . n A 1 125 SER 125 121 ? ? ? A . n A 1 126 SER 126 122 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 201 1 ZN ZN A . C 2 ZN 1 202 1 ZN ZN A . D 2 ZN 1 203 1 ZN ZN A . E 2 ZN 1 204 1 ZN ZN A . F 3 GOL 1 205 1 GOL GOL A . G 3 GOL 1 206 2 GOL GOL A . H 4 EDO 1 207 1 EDO EDO A . I 4 EDO 1 208 2 EDO EDO A . J 4 EDO 1 209 3 EDO EDO A . K 5 HOH 1 301 77 HOH HOH A . K 5 HOH 2 302 144 HOH HOH A . K 5 HOH 3 303 137 HOH HOH A . K 5 HOH 4 304 62 HOH HOH A . K 5 HOH 5 305 122 HOH HOH A . K 5 HOH 6 306 95 HOH HOH A . K 5 HOH 7 307 26 HOH HOH A . K 5 HOH 8 308 142 HOH HOH A . K 5 HOH 9 309 102 HOH HOH A . K 5 HOH 10 310 120 HOH HOH A . K 5 HOH 11 311 140 HOH HOH A . K 5 HOH 12 312 16 HOH HOH A . K 5 HOH 13 313 25 HOH HOH A . K 5 HOH 14 314 119 HOH HOH A . K 5 HOH 15 315 60 HOH HOH A . K 5 HOH 16 316 43 HOH HOH A . K 5 HOH 17 317 103 HOH HOH A . K 5 HOH 18 318 27 HOH HOH A . K 5 HOH 19 319 72 HOH HOH A . K 5 HOH 20 320 36 HOH HOH A . K 5 HOH 21 321 37 HOH HOH A . K 5 HOH 22 322 33 HOH HOH A . K 5 HOH 23 323 82 HOH HOH A . K 5 HOH 24 324 31 HOH HOH A . K 5 HOH 25 325 96 HOH HOH A . K 5 HOH 26 326 56 HOH HOH A . K 5 HOH 27 327 44 HOH HOH A . K 5 HOH 28 328 97 HOH HOH A . K 5 HOH 29 329 131 HOH HOH A . K 5 HOH 30 330 83 HOH HOH A . K 5 HOH 31 331 139 HOH HOH A . K 5 HOH 32 332 8 HOH HOH A . K 5 HOH 33 333 30 HOH HOH A . K 5 HOH 34 334 38 HOH HOH A . K 5 HOH 35 335 4 HOH HOH A . K 5 HOH 36 336 70 HOH HOH A . K 5 HOH 37 337 90 HOH HOH A . K 5 HOH 38 338 64 HOH HOH A . K 5 HOH 39 339 47 HOH HOH A . K 5 HOH 40 340 14 HOH HOH A . K 5 HOH 41 341 39 HOH HOH A . K 5 HOH 42 342 11 HOH HOH A . K 5 HOH 43 343 80 HOH HOH A . K 5 HOH 44 344 141 HOH HOH A . K 5 HOH 45 345 42 HOH HOH A . K 5 HOH 46 346 87 HOH HOH A . K 5 HOH 47 347 7 HOH HOH A . K 5 HOH 48 348 136 HOH HOH A . K 5 HOH 49 349 114 HOH HOH A . K 5 HOH 50 350 76 HOH HOH A . K 5 HOH 51 351 74 HOH HOH A . K 5 HOH 52 352 41 HOH HOH A . K 5 HOH 53 353 9 HOH HOH A . K 5 HOH 54 354 67 HOH HOH A . K 5 HOH 55 355 92 HOH HOH A . K 5 HOH 56 356 75 HOH HOH A . K 5 HOH 57 357 5 HOH HOH A . K 5 HOH 58 358 15 HOH HOH A . K 5 HOH 59 359 28 HOH HOH A . K 5 HOH 60 360 24 HOH HOH A . K 5 HOH 61 361 20 HOH HOH A . K 5 HOH 62 362 23 HOH HOH A . K 5 HOH 63 363 100 HOH HOH A . K 5 HOH 64 364 121 HOH HOH A . K 5 HOH 65 365 22 HOH HOH A . K 5 HOH 66 366 3 HOH HOH A . K 5 HOH 67 367 124 HOH HOH A . K 5 HOH 68 368 108 HOH HOH A . K 5 HOH 69 369 17 HOH HOH A . K 5 HOH 70 370 68 HOH HOH A . K 5 HOH 71 371 19 HOH HOH A . K 5 HOH 72 372 88 HOH HOH A . K 5 HOH 73 373 86 HOH HOH A . K 5 HOH 74 374 59 HOH HOH A . K 5 HOH 75 375 134 HOH HOH A . K 5 HOH 76 376 32 HOH HOH A . K 5 HOH 77 377 12 HOH HOH A . K 5 HOH 78 378 63 HOH HOH A . K 5 HOH 79 379 57 HOH HOH A . K 5 HOH 80 380 98 HOH HOH A . K 5 HOH 81 381 79 HOH HOH A . K 5 HOH 82 382 132 HOH HOH A . K 5 HOH 83 383 46 HOH HOH A . K 5 HOH 84 384 143 HOH HOH A . K 5 HOH 85 385 69 HOH HOH A . K 5 HOH 86 386 29 HOH HOH A . K 5 HOH 87 387 130 HOH HOH A . K 5 HOH 88 388 99 HOH HOH A . K 5 HOH 89 389 111 HOH HOH A . K 5 HOH 90 390 112 HOH HOH A . K 5 HOH 91 391 126 HOH HOH A . K 5 HOH 92 392 81 HOH HOH A . K 5 HOH 93 393 94 HOH HOH A . K 5 HOH 94 394 34 HOH HOH A . K 5 HOH 95 395 135 HOH HOH A . K 5 HOH 96 396 129 HOH HOH A . K 5 HOH 97 397 109 HOH HOH A . K 5 HOH 98 398 58 HOH HOH A . K 5 HOH 99 399 51 HOH HOH A . K 5 HOH 100 400 115 HOH HOH A . K 5 HOH 101 401 106 HOH HOH A . K 5 HOH 102 402 127 HOH HOH A . K 5 HOH 103 403 61 HOH HOH A . K 5 HOH 104 404 45 HOH HOH A . K 5 HOH 105 405 138 HOH HOH A . K 5 HOH 106 406 48 HOH HOH A . K 5 HOH 107 407 128 HOH HOH A . K 5 HOH 108 408 133 HOH HOH A . K 5 HOH 109 409 93 HOH HOH A . K 5 HOH 110 410 89 HOH HOH A . K 5 HOH 111 411 40 HOH HOH A . K 5 HOH 112 412 54 HOH HOH A . K 5 HOH 113 413 91 HOH HOH A . K 5 HOH 114 414 104 HOH HOH A . K 5 HOH 115 415 125 HOH HOH A . K 5 HOH 116 416 123 HOH HOH A . K 5 HOH 117 417 116 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.2_1309 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5VDC _cell.details ? _cell.formula_units_Z ? _cell.length_a 107.500 _cell.length_a_esd ? _cell.length_b 107.500 _cell.length_b_esd ? _cell.length_c 53.300 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VDC _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VDC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.2 M Ammonium sulfate, 0.15 M Ammonium citrate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-11-20 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.2818 1.0 2 0.9795 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list '1.2818, 0.9795' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5VDC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.6 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20713 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 26.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 28.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.6 _reflns_shell.d_res_low 1.69 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3249 _reflns_shell.percent_possible_all 98.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 26.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.78 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5VDC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.600 _refine.ls_d_res_low 47.753 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20701 _refine.ls_number_reflns_R_free 1035 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.03 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1431 _refine.ls_R_factor_R_free 0.1906 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1406 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 18.56 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.13 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 908 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 1053 _refine_hist.d_res_high 1.600 _refine_hist.d_res_low 47.753 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 ? 1024 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.285 ? 1386 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 14.418 ? 389 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.080 ? 140 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 187 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.6000 1.6844 . . 146 2733 98.00 . . . 0.2659 . 0.1824 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6844 1.7899 . . 146 2759 99.00 . . . 0.2349 . 0.1411 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7899 1.9281 . . 144 2761 99.00 . . . 0.1643 . 0.1157 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9281 2.1222 . . 145 2803 99.00 . . . 0.1498 . 0.1113 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1222 2.4292 . . 148 2795 99.00 . . . 0.1663 . 0.1157 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4292 3.0605 . . 149 2845 99.00 . . . 0.2077 . 0.1540 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0605 47.7739 . . 157 2970 99.00 . . . 0.1943 . 0.1472 . . . . . . . . . . # _struct.entry_id 5VDC _struct.title 'Crystal structure of the human DPF2 tandem PHD finger domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VDC _struct_keywords.text 'Histone Reader, Tandem PHD Finger, AML, Myeloid Differentiation, GENE REGULATION' _struct_keywords.pdbx_keywords 'GENE REGULATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code REQU_HUMAN _struct_ref.pdbx_db_accession Q92785 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCD RGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS ; _struct_ref.pdbx_align_begin 270 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5VDC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 126 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q92785 _struct_ref_seq.db_align_beg 270 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 391 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 122 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5VDC GLY A 1 ? UNP Q92785 ? ? 'expression tag' -3 1 1 5VDC MET A 2 ? UNP Q92785 ? ? 'expression tag' -2 2 1 5VDC GLY A 3 ? UNP Q92785 ? ? 'expression tag' -1 3 1 5VDC SER A 4 ? UNP Q92785 ? ? 'expression tag' 0 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 45 ? VAL A 52 ? THR A 41 VAL A 48 1 ? 8 HELX_P HELX_P2 AA2 ASN A 73 ? ASP A 75 ? ASN A 69 ASP A 71 5 ? 3 HELX_P HELX_P3 AA3 CYS A 106 ? LYS A 114 ? CYS A 102 LYS A 110 1 ? 9 HELX_P HELX_P4 AA4 GLU A 115 ? ALA A 117 ? GLU A 111 ALA A 113 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 8 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 4 A ZN 201 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc2 metalc ? ? A CYS 11 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 7 A ZN 201 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc3 metalc ? ? A CYS 30 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 26 A ZN 202 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc4 metalc ? ? A CYS 33 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 29 A ZN 202 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc5 metalc ? ? A HIS 38 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 34 A ZN 201 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc6 metalc ? ? A CYS 41 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 37 A ZN 201 1_555 ? ? ? ? ? ? ? 2.276 ? ? metalc7 metalc ? ? A CYS 59 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 55 A ZN 202 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc8 metalc ? ? A CYS 62 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 58 A ZN 202 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc9 metalc ? ? A CYS 65 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 61 A ZN 204 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc10 metalc ? ? A CYS 68 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 64 A ZN 204 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc11 metalc ? ? A CYS 80 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 76 A ZN 203 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc12 metalc ? ? A CYS 83 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 79 A ZN 203 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc13 metalc ? ? A HIS 88 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 84 A ZN 204 1_555 ? ? ? ? ? ? ? 2.052 ? ? metalc14 metalc ? ? A CYS 91 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 87 A ZN 204 1_555 ? ? ? ? ? ? ? 2.243 ? ? metalc15 metalc ? ? A CYS 106 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 102 A ZN 203 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc16 metalc ? ? A CYS 109 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 105 A ZN 203 1_555 ? ? ? ? ? ? ? 2.321 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 8 ? A CYS 4 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 11 ? A CYS 7 ? 1_555 110.8 ? 2 SG ? A CYS 8 ? A CYS 4 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 38 ? A HIS 34 ? 1_555 102.1 ? 3 SG ? A CYS 11 ? A CYS 7 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 38 ? A HIS 34 ? 1_555 100.2 ? 4 SG ? A CYS 8 ? A CYS 4 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 41 ? A CYS 37 ? 1_555 113.1 ? 5 SG ? A CYS 11 ? A CYS 7 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 41 ? A CYS 37 ? 1_555 114.7 ? 6 ND1 ? A HIS 38 ? A HIS 34 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 41 ? A CYS 37 ? 1_555 114.7 ? 7 SG ? A CYS 30 ? A CYS 26 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 SG ? A CYS 33 ? A CYS 29 ? 1_555 112.2 ? 8 SG ? A CYS 30 ? A CYS 26 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 SG ? A CYS 59 ? A CYS 55 ? 1_555 113.6 ? 9 SG ? A CYS 33 ? A CYS 29 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 SG ? A CYS 59 ? A CYS 55 ? 1_555 109.9 ? 10 SG ? A CYS 30 ? A CYS 26 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 SG ? A CYS 62 ? A CYS 58 ? 1_555 103.9 ? 11 SG ? A CYS 33 ? A CYS 29 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 SG ? A CYS 62 ? A CYS 58 ? 1_555 109.4 ? 12 SG ? A CYS 59 ? A CYS 55 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 SG ? A CYS 62 ? A CYS 58 ? 1_555 107.4 ? 13 SG ? A CYS 65 ? A CYS 61 ? 1_555 ZN ? E ZN . ? A ZN 204 ? 1_555 SG ? A CYS 68 ? A CYS 64 ? 1_555 110.4 ? 14 SG ? A CYS 65 ? A CYS 61 ? 1_555 ZN ? E ZN . ? A ZN 204 ? 1_555 ND1 ? A HIS 88 ? A HIS 84 ? 1_555 101.2 ? 15 SG ? A CYS 68 ? A CYS 64 ? 1_555 ZN ? E ZN . ? A ZN 204 ? 1_555 ND1 ? A HIS 88 ? A HIS 84 ? 1_555 97.5 ? 16 SG ? A CYS 65 ? A CYS 61 ? 1_555 ZN ? E ZN . ? A ZN 204 ? 1_555 SG ? A CYS 91 ? A CYS 87 ? 1_555 117.1 ? 17 SG ? A CYS 68 ? A CYS 64 ? 1_555 ZN ? E ZN . ? A ZN 204 ? 1_555 SG ? A CYS 91 ? A CYS 87 ? 1_555 112.6 ? 18 ND1 ? A HIS 88 ? A HIS 84 ? 1_555 ZN ? E ZN . ? A ZN 204 ? 1_555 SG ? A CYS 91 ? A CYS 87 ? 1_555 115.9 ? 19 SG ? A CYS 80 ? A CYS 76 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 83 ? A CYS 79 ? 1_555 106.5 ? 20 SG ? A CYS 80 ? A CYS 76 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 106 ? A CYS 102 ? 1_555 111.5 ? 21 SG ? A CYS 83 ? A CYS 79 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 106 ? A CYS 102 ? 1_555 112.5 ? 22 SG ? A CYS 80 ? A CYS 76 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 109 ? A CYS 105 ? 1_555 110.3 ? 23 SG ? A CYS 83 ? A CYS 79 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 109 ? A CYS 105 ? 1_555 104.6 ? 24 SG ? A CYS 106 ? A CYS 102 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 109 ? A CYS 105 ? 1_555 111.2 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 93 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 89 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 94 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 90 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.82 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 28 ? SER A 29 ? VAL A 24 SER A 25 AA1 2 SER A 36 ? GLY A 37 ? SER A 32 GLY A 33 AA2 1 LEU A 77 ? PHE A 79 ? LEU A 73 PHE A 75 AA2 2 GLY A 86 ? HIS A 88 ? GLY A 82 HIS A 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 28 ? N VAL A 24 O GLY A 37 ? O GLY A 33 AA2 1 2 N LEU A 78 ? N LEU A 74 O TYR A 87 ? O TYR A 83 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 201 ? 4 'binding site for residue ZN A 201' AC2 Software A ZN 202 ? 4 'binding site for residue ZN A 202' AC3 Software A ZN 203 ? 4 'binding site for residue ZN A 203' AC4 Software A ZN 204 ? 4 'binding site for residue ZN A 204' AC5 Software A GOL 205 ? 5 'binding site for residue GOL A 205' AC6 Software A GOL 206 ? 2 'binding site for residue GOL A 206' AC7 Software A EDO 207 ? 9 'binding site for residue EDO A 207' AC8 Software A EDO 208 ? 6 'binding site for residue EDO A 208' AC9 Software A EDO 209 ? 10 'binding site for residue EDO A 209' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 8 ? CYS A 4 . ? 1_555 ? 2 AC1 4 CYS A 11 ? CYS A 7 . ? 1_555 ? 3 AC1 4 HIS A 38 ? HIS A 34 . ? 1_555 ? 4 AC1 4 CYS A 41 ? CYS A 37 . ? 1_555 ? 5 AC2 4 CYS A 30 ? CYS A 26 . ? 1_555 ? 6 AC2 4 CYS A 33 ? CYS A 29 . ? 1_555 ? 7 AC2 4 CYS A 59 ? CYS A 55 . ? 1_555 ? 8 AC2 4 CYS A 62 ? CYS A 58 . ? 1_555 ? 9 AC3 4 CYS A 80 ? CYS A 76 . ? 1_555 ? 10 AC3 4 CYS A 83 ? CYS A 79 . ? 1_555 ? 11 AC3 4 CYS A 106 ? CYS A 102 . ? 1_555 ? 12 AC3 4 CYS A 109 ? CYS A 105 . ? 1_555 ? 13 AC4 4 CYS A 65 ? CYS A 61 . ? 1_555 ? 14 AC4 4 CYS A 68 ? CYS A 64 . ? 1_555 ? 15 AC4 4 HIS A 88 ? HIS A 84 . ? 1_555 ? 16 AC4 4 CYS A 91 ? CYS A 87 . ? 1_555 ? 17 AC5 5 PHE A 10 ? PHE A 6 . ? 1_555 ? 18 AC5 5 CYS A 59 ? CYS A 55 . ? 1_555 ? 19 AC5 5 ILE A 60 ? ILE A 56 . ? 1_555 ? 20 AC5 5 HOH K . ? HOH A 310 . ? 1_555 ? 21 AC5 5 HOH K . ? HOH A 317 . ? 1_555 ? 22 AC6 2 PRO A 94 ? PRO A 90 . ? 1_555 ? 23 AC6 2 SER A 95 ? SER A 91 . ? 1_555 ? 24 AC7 9 ILE A 67 ? ILE A 63 . ? 1_555 ? 25 AC7 9 HIS A 107 ? HIS A 103 . ? 1_555 ? 26 AC7 9 LEU A 108 ? LEU A 104 . ? 16_555 ? 27 AC7 9 HOH K . ? HOH A 301 . ? 1_555 ? 28 AC7 9 HOH K . ? HOH A 306 . ? 1_555 ? 29 AC7 9 HOH K . ? HOH A 308 . ? 16_555 ? 30 AC7 9 HOH K . ? HOH A 314 . ? 1_555 ? 31 AC7 9 HOH K . ? HOH A 350 . ? 1_555 ? 32 AC7 9 HOH K . ? HOH A 351 . ? 1_555 ? 33 AC8 6 ARG A 56 ? ARG A 52 . ? 1_555 ? 34 AC8 6 GLN A 58 ? GLN A 54 . ? 1_555 ? 35 AC8 6 CYS A 65 ? CYS A 61 . ? 1_555 ? 36 AC8 6 ASN A 66 ? ASN A 62 . ? 1_555 ? 37 AC8 6 HOH K . ? HOH A 312 . ? 1_555 ? 38 AC8 6 HOH K . ? HOH A 373 . ? 1_555 ? 39 AC9 10 GLY A 102 ? GLY A 98 . ? 7_555 ? 40 AC9 10 SER A 103 ? SER A 99 . ? 7_555 ? 41 AC9 10 SER A 118 ? SER A 114 . ? 7_555 ? 42 AC9 10 ILE A 119 ? ILE A 115 . ? 7_555 ? 43 AC9 10 ILE A 119 ? ILE A 115 . ? 1_555 ? 44 AC9 10 TYR A 120 ? TYR A 116 . ? 7_555 ? 45 AC9 10 TYR A 120 ? TYR A 116 . ? 1_555 ? 46 AC9 10 GLN A 121 ? GLN A 117 . ? 1_555 ? 47 AC9 10 HOH K . ? HOH A 302 . ? 7_555 ? 48 AC9 10 HOH K . ? HOH A 302 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HE A ARG 52 ? ? O A HOH 303 ? ? 1.49 2 1 O A HOH 351 ? ? O A HOH 356 ? ? 1.85 3 1 O1 A EDO 207 ? ? O A HOH 301 ? ? 2.16 4 1 O A HOH 316 ? ? O A HOH 317 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 411 ? ? 1_555 O A HOH 416 ? ? 7_555 2.07 2 1 O3 A GOL 205 ? ? 1_555 O3 A GOL 205 ? ? 5_655 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 28 ? B -95.18 -66.33 2 1 LYS A 110 ? ? 52.31 -121.68 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 417 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.92 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A MET -2 ? A MET 2 3 1 Y 1 A GLY -1 ? A GLY 3 4 1 Y 1 A SER 0 ? A SER 4 5 1 Y 1 A ASN 118 ? A ASN 122 6 1 Y 1 A GLN 119 ? A GLN 123 7 1 Y 1 A ASN 120 ? A ASN 124 8 1 Y 1 A SER 121 ? A SER 125 9 1 Y 1 A SER 122 ? A SER 126 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 GOL C1 C N N 147 GOL O1 O N N 148 GOL C2 C N N 149 GOL O2 O N N 150 GOL C3 C N N 151 GOL O3 O N N 152 GOL H11 H N N 153 GOL H12 H N N 154 GOL HO1 H N N 155 GOL H2 H N N 156 GOL HO2 H N N 157 GOL H31 H N N 158 GOL H32 H N N 159 GOL HO3 H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 SER N N N N 314 SER CA C N S 315 SER C C N N 316 SER O O N N 317 SER CB C N N 318 SER OG O N N 319 SER OXT O N N 320 SER H H N N 321 SER H2 H N N 322 SER HA H N N 323 SER HB2 H N N 324 SER HB3 H N N 325 SER HG H N N 326 SER HXT H N N 327 THR N N N N 328 THR CA C N S 329 THR C C N N 330 THR O O N N 331 THR CB C N R 332 THR OG1 O N N 333 THR CG2 C N N 334 THR OXT O N N 335 THR H H N N 336 THR H2 H N N 337 THR HA H N N 338 THR HB H N N 339 THR HG1 H N N 340 THR HG21 H N N 341 THR HG22 H N N 342 THR HG23 H N N 343 THR HXT H N N 344 TRP N N N N 345 TRP CA C N S 346 TRP C C N N 347 TRP O O N N 348 TRP CB C N N 349 TRP CG C Y N 350 TRP CD1 C Y N 351 TRP CD2 C Y N 352 TRP NE1 N Y N 353 TRP CE2 C Y N 354 TRP CE3 C Y N 355 TRP CZ2 C Y N 356 TRP CZ3 C Y N 357 TRP CH2 C Y N 358 TRP OXT O N N 359 TRP H H N N 360 TRP H2 H N N 361 TRP HA H N N 362 TRP HB2 H N N 363 TRP HB3 H N N 364 TRP HD1 H N N 365 TRP HE1 H N N 366 TRP HE3 H N N 367 TRP HZ2 H N N 368 TRP HZ3 H N N 369 TRP HH2 H N N 370 TRP HXT H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 ZN ZN ZN N N 415 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 GOL C1 O1 sing N N 138 GOL C1 C2 sing N N 139 GOL C1 H11 sing N N 140 GOL C1 H12 sing N N 141 GOL O1 HO1 sing N N 142 GOL C2 O2 sing N N 143 GOL C2 C3 sing N N 144 GOL C2 H2 sing N N 145 GOL O2 HO2 sing N N 146 GOL C3 O3 sing N N 147 GOL C3 H31 sing N N 148 GOL C3 H32 sing N N 149 GOL O3 HO3 sing N N 150 HIS N CA sing N N 151 HIS N H sing N N 152 HIS N H2 sing N N 153 HIS CA C sing N N 154 HIS CA CB sing N N 155 HIS CA HA sing N N 156 HIS C O doub N N 157 HIS C OXT sing N N 158 HIS CB CG sing N N 159 HIS CB HB2 sing N N 160 HIS CB HB3 sing N N 161 HIS CG ND1 sing Y N 162 HIS CG CD2 doub Y N 163 HIS ND1 CE1 doub Y N 164 HIS ND1 HD1 sing N N 165 HIS CD2 NE2 sing Y N 166 HIS CD2 HD2 sing N N 167 HIS CE1 NE2 sing Y N 168 HIS CE1 HE1 sing N N 169 HIS NE2 HE2 sing N N 170 HIS OXT HXT sing N N 171 HOH O H1 sing N N 172 HOH O H2 sing N N 173 ILE N CA sing N N 174 ILE N H sing N N 175 ILE N H2 sing N N 176 ILE CA C sing N N 177 ILE CA CB sing N N 178 ILE CA HA sing N N 179 ILE C O doub N N 180 ILE C OXT sing N N 181 ILE CB CG1 sing N N 182 ILE CB CG2 sing N N 183 ILE CB HB sing N N 184 ILE CG1 CD1 sing N N 185 ILE CG1 HG12 sing N N 186 ILE CG1 HG13 sing N N 187 ILE CG2 HG21 sing N N 188 ILE CG2 HG22 sing N N 189 ILE CG2 HG23 sing N N 190 ILE CD1 HD11 sing N N 191 ILE CD1 HD12 sing N N 192 ILE CD1 HD13 sing N N 193 ILE OXT HXT sing N N 194 LEU N CA sing N N 195 LEU N H sing N N 196 LEU N H2 sing N N 197 LEU CA C sing N N 198 LEU CA CB sing N N 199 LEU CA HA sing N N 200 LEU C O doub N N 201 LEU C OXT sing N N 202 LEU CB CG sing N N 203 LEU CB HB2 sing N N 204 LEU CB HB3 sing N N 205 LEU CG CD1 sing N N 206 LEU CG CD2 sing N N 207 LEU CG HG sing N N 208 LEU CD1 HD11 sing N N 209 LEU CD1 HD12 sing N N 210 LEU CD1 HD13 sing N N 211 LEU CD2 HD21 sing N N 212 LEU CD2 HD22 sing N N 213 LEU CD2 HD23 sing N N 214 LEU OXT HXT sing N N 215 LYS N CA sing N N 216 LYS N H sing N N 217 LYS N H2 sing N N 218 LYS CA C sing N N 219 LYS CA CB sing N N 220 LYS CA HA sing N N 221 LYS C O doub N N 222 LYS C OXT sing N N 223 LYS CB CG sing N N 224 LYS CB HB2 sing N N 225 LYS CB HB3 sing N N 226 LYS CG CD sing N N 227 LYS CG HG2 sing N N 228 LYS CG HG3 sing N N 229 LYS CD CE sing N N 230 LYS CD HD2 sing N N 231 LYS CD HD3 sing N N 232 LYS CE NZ sing N N 233 LYS CE HE2 sing N N 234 LYS CE HE3 sing N N 235 LYS NZ HZ1 sing N N 236 LYS NZ HZ2 sing N N 237 LYS NZ HZ3 sing N N 238 LYS OXT HXT sing N N 239 MET N CA sing N N 240 MET N H sing N N 241 MET N H2 sing N N 242 MET CA C sing N N 243 MET CA CB sing N N 244 MET CA HA sing N N 245 MET C O doub N N 246 MET C OXT sing N N 247 MET CB CG sing N N 248 MET CB HB2 sing N N 249 MET CB HB3 sing N N 250 MET CG SD sing N N 251 MET CG HG2 sing N N 252 MET CG HG3 sing N N 253 MET SD CE sing N N 254 MET CE HE1 sing N N 255 MET CE HE2 sing N N 256 MET CE HE3 sing N N 257 MET OXT HXT sing N N 258 PHE N CA sing N N 259 PHE N H sing N N 260 PHE N H2 sing N N 261 PHE CA C sing N N 262 PHE CA CB sing N N 263 PHE CA HA sing N N 264 PHE C O doub N N 265 PHE C OXT sing N N 266 PHE CB CG sing N N 267 PHE CB HB2 sing N N 268 PHE CB HB3 sing N N 269 PHE CG CD1 doub Y N 270 PHE CG CD2 sing Y N 271 PHE CD1 CE1 sing Y N 272 PHE CD1 HD1 sing N N 273 PHE CD2 CE2 doub Y N 274 PHE CD2 HD2 sing N N 275 PHE CE1 CZ doub Y N 276 PHE CE1 HE1 sing N N 277 PHE CE2 CZ sing Y N 278 PHE CE2 HE2 sing N N 279 PHE CZ HZ sing N N 280 PHE OXT HXT sing N N 281 PRO N CA sing N N 282 PRO N CD sing N N 283 PRO N H sing N N 284 PRO CA C sing N N 285 PRO CA CB sing N N 286 PRO CA HA sing N N 287 PRO C O doub N N 288 PRO C OXT sing N N 289 PRO CB CG sing N N 290 PRO CB HB2 sing N N 291 PRO CB HB3 sing N N 292 PRO CG CD sing N N 293 PRO CG HG2 sing N N 294 PRO CG HG3 sing N N 295 PRO CD HD2 sing N N 296 PRO CD HD3 sing N N 297 PRO OXT HXT sing N N 298 SER N CA sing N N 299 SER N H sing N N 300 SER N H2 sing N N 301 SER CA C sing N N 302 SER CA CB sing N N 303 SER CA HA sing N N 304 SER C O doub N N 305 SER C OXT sing N N 306 SER CB OG sing N N 307 SER CB HB2 sing N N 308 SER CB HB3 sing N N 309 SER OG HG sing N N 310 SER OXT HXT sing N N 311 THR N CA sing N N 312 THR N H sing N N 313 THR N H2 sing N N 314 THR CA C sing N N 315 THR CA CB sing N N 316 THR CA HA sing N N 317 THR C O doub N N 318 THR C OXT sing N N 319 THR CB OG1 sing N N 320 THR CB CG2 sing N N 321 THR CB HB sing N N 322 THR OG1 HG1 sing N N 323 THR CG2 HG21 sing N N 324 THR CG2 HG22 sing N N 325 THR CG2 HG23 sing N N 326 THR OXT HXT sing N N 327 TRP N CA sing N N 328 TRP N H sing N N 329 TRP N H2 sing N N 330 TRP CA C sing N N 331 TRP CA CB sing N N 332 TRP CA HA sing N N 333 TRP C O doub N N 334 TRP C OXT sing N N 335 TRP CB CG sing N N 336 TRP CB HB2 sing N N 337 TRP CB HB3 sing N N 338 TRP CG CD1 doub Y N 339 TRP CG CD2 sing Y N 340 TRP CD1 NE1 sing Y N 341 TRP CD1 HD1 sing N N 342 TRP CD2 CE2 doub Y N 343 TRP CD2 CE3 sing Y N 344 TRP NE1 CE2 sing Y N 345 TRP NE1 HE1 sing N N 346 TRP CE2 CZ2 sing Y N 347 TRP CE3 CZ3 doub Y N 348 TRP CE3 HE3 sing N N 349 TRP CZ2 CH2 doub Y N 350 TRP CZ2 HZ2 sing N N 351 TRP CZ3 CH2 sing Y N 352 TRP CZ3 HZ3 sing N N 353 TRP CH2 HH2 sing N N 354 TRP OXT HXT sing N N 355 TYR N CA sing N N 356 TYR N H sing N N 357 TYR N H2 sing N N 358 TYR CA C sing N N 359 TYR CA CB sing N N 360 TYR CA HA sing N N 361 TYR C O doub N N 362 TYR C OXT sing N N 363 TYR CB CG sing N N 364 TYR CB HB2 sing N N 365 TYR CB HB3 sing N N 366 TYR CG CD1 doub Y N 367 TYR CG CD2 sing Y N 368 TYR CD1 CE1 sing Y N 369 TYR CD1 HD1 sing N N 370 TYR CD2 CE2 doub Y N 371 TYR CD2 HD2 sing N N 372 TYR CE1 CZ doub Y N 373 TYR CE1 HE1 sing N N 374 TYR CE2 CZ sing Y N 375 TYR CE2 HE2 sing N N 376 TYR CZ OH sing N N 377 TYR OH HH sing N N 378 TYR OXT HXT sing N N 379 VAL N CA sing N N 380 VAL N H sing N N 381 VAL N H2 sing N N 382 VAL CA C sing N N 383 VAL CA CB sing N N 384 VAL CA HA sing N N 385 VAL C O doub N N 386 VAL C OXT sing N N 387 VAL CB CG1 sing N N 388 VAL CB CG2 sing N N 389 VAL CB HB sing N N 390 VAL CG1 HG11 sing N N 391 VAL CG1 HG12 sing N N 392 VAL CG1 HG13 sing N N 393 VAL CG2 HG21 sing N N 394 VAL CG2 HG22 sing N N 395 VAL CG2 HG23 sing N N 396 VAL OXT HXT sing N N 397 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Heritage Medical Research Institute' 'United States' ? 1 'Howard Hughes Medical Institute (HHMI)' 'United States' ? 2 # _atom_sites.entry_id 5VDC _atom_sites.fract_transf_matrix[1][1] 0.009302 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009302 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018762 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_