HEADER TRANSCRIPTION 07-APR-17 5VFA TITLE RITR MUTANT - C128D COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESPONSE REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE (STRAIN ATCC BAA-255 / SOURCE 3 R6); SOURCE 4 ORGANISM_TAXID: 171101; SOURCE 5 STRAIN: ATCC BAA-255 / R6; SOURCE 6 GENE: CSRR, SPR0336; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSUMO KEYWDS REPRESSOR OF IRON TRANSPORTER, ASPARTATE-LESS RECEIVER DOMAIN KEYWDS 2 PROTEIN, TRANSCRIPTION REGULATOR, MONOMER, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR L.HAN,N.R.SILVAGGI REVDAT 3 04-OCT-23 5VFA 1 REMARK REVDAT 2 28-NOV-18 5VFA 1 JRNL REVDAT 1 11-APR-18 5VFA 0 JRNL AUTH D.G.GLANVILLE,L.HAN,A.F.MAULE,A.WOODACRE,D.THANKI, JRNL AUTH 2 I.T.ABDULLAH,J.A.MORRISSEY,T.B.CLARKE,H.YESILKAYA, JRNL AUTH 3 N.R.SILVAGGI,A.T.ULIJASZ JRNL TITL RITR IS AN ARCHETYPE FOR A NOVEL FAMILY OF REDOX SENSORS IN JRNL TITL 2 THE STREPTOCOCCI THAT HAS EVOLVED FROM TWO-COMPONENT JRNL TITL 3 RESPONSE REGULATORS AND IS REQUIRED FOR PNEUMOCOCCAL JRNL TITL 4 COLONIZATION. JRNL REF PLOS PATHOG. V. 14 07052 2018 JRNL REFN ESSN 1553-7374 JRNL PMID 29750817 JRNL DOI 10.1371/JOURNAL.PPAT.1007052 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2450: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 76664 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.610 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.5243 - 3.4963 0.99 5448 146 0.1497 0.1572 REMARK 3 2 3.4963 - 2.7759 1.00 5448 146 0.1529 0.1817 REMARK 3 3 2.7759 - 2.4253 1.00 5418 145 0.1567 0.1632 REMARK 3 4 2.4253 - 2.2036 1.00 5388 145 0.1537 0.1876 REMARK 3 5 2.2036 - 2.0457 1.00 5392 144 0.1572 0.1818 REMARK 3 6 2.0457 - 1.9252 1.00 5398 144 0.1664 0.1909 REMARK 3 7 1.9252 - 1.8288 1.00 5390 144 0.1694 0.1737 REMARK 3 8 1.8288 - 1.7492 1.00 5366 145 0.1861 0.2341 REMARK 3 9 1.7492 - 1.6818 1.00 5369 143 0.1833 0.2108 REMARK 3 10 1.6818 - 1.6238 1.00 5408 145 0.1934 0.2345 REMARK 3 11 1.6238 - 1.5731 1.00 5349 143 0.2005 0.2452 REMARK 3 12 1.5731 - 1.5281 1.00 5322 143 0.2126 0.2125 REMARK 3 13 1.5281 - 1.4879 0.97 5246 141 0.2321 0.2737 REMARK 3 14 1.4879 - 1.4516 0.88 4722 126 0.2488 0.2757 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3718 REMARK 3 ANGLE : 0.954 5004 REMARK 3 CHIRALITY : 0.073 571 REMARK 3 PLANARITY : 0.006 630 REMARK 3 DIHEDRAL : 20.119 1435 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 174.5387 76.9060 -7.6085 REMARK 3 T TENSOR REMARK 3 T11: 0.1435 T22: 0.2014 REMARK 3 T33: 0.2239 T12: 0.0370 REMARK 3 T13: 0.0210 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 2.5373 L22: 2.0210 REMARK 3 L33: 3.0637 L12: 0.7483 REMARK 3 L13: 0.2371 L23: -0.5056 REMARK 3 S TENSOR REMARK 3 S11: 0.0518 S12: 0.0715 S13: 0.2721 REMARK 3 S21: 0.0359 S22: 0.0091 S23: -0.1662 REMARK 3 S31: -0.0290 S32: 0.0163 S33: -0.0716 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 173.6409 66.9739 -2.8883 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.2113 REMARK 3 T33: 0.2680 T12: 0.0551 REMARK 3 T13: -0.0235 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 3.0855 L22: 5.5376 REMARK 3 L33: 2.2501 L12: 1.3470 REMARK 3 L13: -0.2210 L23: -0.7127 REMARK 3 S TENSOR REMARK 3 S11: -0.0057 S12: -0.0898 S13: -0.5018 REMARK 3 S21: -0.1429 S22: 0.0003 S23: -0.4259 REMARK 3 S31: 0.2278 S32: 0.2039 S33: -0.0029 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 161.8455 74.1372 -2.5843 REMARK 3 T TENSOR REMARK 3 T11: 0.1650 T22: 0.1445 REMARK 3 T33: 0.1568 T12: 0.0120 REMARK 3 T13: 0.0120 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.3240 L22: 1.4087 REMARK 3 L33: 1.1285 L12: -0.1362 REMARK 3 L13: 0.2089 L23: 0.0417 REMARK 3 S TENSOR REMARK 3 S11: 0.0267 S12: -0.1062 S13: 0.1046 REMARK 3 S21: 0.0984 S22: 0.0216 S23: -0.0022 REMARK 3 S31: 0.0641 S32: -0.0244 S33: -0.0394 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.6019 67.6350 20.4617 REMARK 3 T TENSOR REMARK 3 T11: 0.3239 T22: 0.3300 REMARK 3 T33: 0.1860 T12: 0.0108 REMARK 3 T13: -0.0757 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 5.4737 L22: 0.2019 REMARK 3 L33: 1.1274 L12: 0.0560 REMARK 3 L13: -2.4878 L23: -0.0186 REMARK 3 S TENSOR REMARK 3 S11: -0.3148 S12: -0.3923 S13: -0.0421 REMARK 3 S21: 0.2795 S22: 0.1743 S23: -0.2185 REMARK 3 S31: -0.1565 S32: 0.2168 S33: 0.1142 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 152.9875 74.7468 14.4959 REMARK 3 T TENSOR REMARK 3 T11: 0.1652 T22: 0.2373 REMARK 3 T33: 0.1538 T12: -0.0236 REMARK 3 T13: -0.0412 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 1.6810 L22: 2.6297 REMARK 3 L33: 0.8863 L12: -0.8324 REMARK 3 L13: -0.6685 L23: 0.1130 REMARK 3 S TENSOR REMARK 3 S11: 0.0699 S12: -0.3123 S13: 0.1858 REMARK 3 S21: 0.1336 S22: 0.0356 S23: -0.1604 REMARK 3 S31: 0.0192 S32: 0.0758 S33: -0.0916 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): 150.6987 79.5548 6.5017 REMARK 3 T TENSOR REMARK 3 T11: 0.1400 T22: 0.1495 REMARK 3 T33: 0.1296 T12: 0.0068 REMARK 3 T13: -0.0051 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 4.1959 L22: 2.4183 REMARK 3 L33: 1.8640 L12: 0.6018 REMARK 3 L13: -0.6659 L23: 0.3170 REMARK 3 S TENSOR REMARK 3 S11: 0.0946 S12: 0.0982 S13: 0.3955 REMARK 3 S21: -0.0748 S22: 0.0807 S23: -0.1210 REMARK 3 S31: -0.1242 S32: -0.0020 S33: -0.1657 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 140.0296 70.1799 15.4776 REMARK 3 T TENSOR REMARK 3 T11: 0.1786 T22: 0.1828 REMARK 3 T33: 0.1290 T12: -0.0130 REMARK 3 T13: 0.0205 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.8873 L22: 7.5665 REMARK 3 L33: 0.3797 L12: 1.4820 REMARK 3 L13: 0.3499 L23: -0.5137 REMARK 3 S TENSOR REMARK 3 S11: 0.0289 S12: -0.1715 S13: 0.0231 REMARK 3 S21: 0.2670 S22: 0.0294 S23: 0.2558 REMARK 3 S31: 0.1159 S32: 0.0476 S33: 0.0310 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 221 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 141.0856 78.9153 17.9573 REMARK 3 T TENSOR REMARK 3 T11: 0.1983 T22: 0.2223 REMARK 3 T33: 0.1609 T12: -0.0166 REMARK 3 T13: 0.0058 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 2.9147 L22: 1.9740 REMARK 3 L33: 0.4541 L12: 0.4911 REMARK 3 L13: -0.5104 L23: 0.7336 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: -0.3192 S13: 0.1661 REMARK 3 S21: 0.2687 S22: -0.0050 S23: 0.1405 REMARK 3 S31: -0.0141 S32: -0.0161 S33: 0.0419 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 171.9959 106.5817 18.8233 REMARK 3 T TENSOR REMARK 3 T11: 0.1486 T22: 0.2073 REMARK 3 T33: 0.2258 T12: -0.0221 REMARK 3 T13: 0.0350 T23: -0.0484 REMARK 3 L TENSOR REMARK 3 L11: 2.1179 L22: 1.8691 REMARK 3 L33: 2.6709 L12: 0.8288 REMARK 3 L13: 0.3265 L23: -0.0645 REMARK 3 S TENSOR REMARK 3 S11: -0.0158 S12: 0.0446 S13: 0.1406 REMARK 3 S21: -0.0401 S22: 0.0522 S23: -0.0644 REMARK 3 S31: -0.0336 S32: 0.1049 S33: -0.0257 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 172.1036 97.2279 24.8052 REMARK 3 T TENSOR REMARK 3 T11: 0.1693 T22: 0.2075 REMARK 3 T33: 0.2592 T12: 0.0256 REMARK 3 T13: 0.0255 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 3.0445 L22: 4.8039 REMARK 3 L33: 3.4471 L12: 0.5411 REMARK 3 L13: -0.3794 L23: -0.5260 REMARK 3 S TENSOR REMARK 3 S11: -0.0887 S12: -0.1455 S13: -0.5032 REMARK 3 S21: -0.2808 S22: 0.0847 S23: -0.3837 REMARK 3 S31: 0.2397 S32: 0.4089 S33: 0.0004 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 45 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 164.4723 97.5686 22.9207 REMARK 3 T TENSOR REMARK 3 T11: 0.1824 T22: 0.1669 REMARK 3 T33: 0.2041 T12: -0.0004 REMARK 3 T13: 0.0093 T23: -0.0371 REMARK 3 L TENSOR REMARK 3 L11: 2.6728 L22: 1.6166 REMARK 3 L33: 1.7813 L12: 0.6598 REMARK 3 L13: 0.1466 L23: -0.2739 REMARK 3 S TENSOR REMARK 3 S11: 0.0410 S12: 0.0114 S13: -0.2267 REMARK 3 S21: 0.0818 S22: 0.0883 S23: -0.0440 REMARK 3 S31: 0.1682 S32: 0.2032 S33: -0.0922 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 61 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.4093 100.6499 21.8735 REMARK 3 T TENSOR REMARK 3 T11: 0.1403 T22: 0.1276 REMARK 3 T33: 0.2035 T12: -0.0158 REMARK 3 T13: 0.0195 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 2.3499 L22: 2.3998 REMARK 3 L33: 2.7831 L12: 0.5897 REMARK 3 L13: -0.3474 L23: -1.1176 REMARK 3 S TENSOR REMARK 3 S11: -0.0502 S12: 0.0837 S13: 0.0031 REMARK 3 S21: -0.0400 S22: 0.1564 S23: 0.2865 REMARK 3 S31: 0.0573 S32: -0.2346 S33: -0.1328 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 162.9211 113.5622 29.2367 REMARK 3 T TENSOR REMARK 3 T11: 0.1736 T22: 0.1839 REMARK 3 T33: 0.3012 T12: -0.0226 REMARK 3 T13: 0.0412 T23: -0.0715 REMARK 3 L TENSOR REMARK 3 L11: 1.3893 L22: 0.7736 REMARK 3 L33: 4.1211 L12: 0.2920 REMARK 3 L13: -1.5323 L23: -0.6749 REMARK 3 S TENSOR REMARK 3 S11: 0.0783 S12: -0.0389 S13: 0.1684 REMARK 3 S21: 0.0941 S22: 0.0490 S23: -0.0384 REMARK 3 S31: -0.0813 S32: -0.0419 S33: -0.1639 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 125 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.2890 101.2884 47.2567 REMARK 3 T TENSOR REMARK 3 T11: 0.3412 T22: 0.2136 REMARK 3 T33: 0.2978 T12: 0.0466 REMARK 3 T13: -0.0390 T23: -0.0416 REMARK 3 L TENSOR REMARK 3 L11: 3.9152 L22: 0.4415 REMARK 3 L33: 2.1389 L12: -0.1024 REMARK 3 L13: -1.5460 L23: -0.3714 REMARK 3 S TENSOR REMARK 3 S11: -0.0662 S12: -0.3158 S13: 0.3298 REMARK 3 S21: 0.5783 S22: 0.2351 S23: -0.2415 REMARK 3 S31: -0.1556 S32: 0.2109 S33: -0.0549 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 148 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 150.4714 105.1405 40.8502 REMARK 3 T TENSOR REMARK 3 T11: 0.1612 T22: 0.1617 REMARK 3 T33: 0.1442 T12: 0.0097 REMARK 3 T13: 0.0270 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.1773 L22: 2.0826 REMARK 3 L33: 0.8398 L12: -0.5862 REMARK 3 L13: -0.0185 L23: -0.0525 REMARK 3 S TENSOR REMARK 3 S11: -0.1143 S12: -0.1232 S13: -0.0973 REMARK 3 S21: 0.0851 S22: 0.0951 S23: -0.0415 REMARK 3 S31: 0.0558 S32: 0.0577 S33: -0.0010 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 186 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 144.4951 105.1843 35.1571 REMARK 3 T TENSOR REMARK 3 T11: 0.1582 T22: 0.1528 REMARK 3 T33: 0.1992 T12: 0.0105 REMARK 3 T13: -0.0072 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 2.7306 L22: 2.4793 REMARK 3 L33: 1.4639 L12: -0.6012 REMARK 3 L13: -0.4441 L23: 0.6472 REMARK 3 S TENSOR REMARK 3 S11: -0.0567 S12: 0.1874 S13: -0.3439 REMARK 3 S21: 0.0071 S22: 0.0532 S23: 0.3648 REMARK 3 S31: 0.0081 S32: -0.1266 S33: -0.0221 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 221 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 138.4959 108.3807 44.5702 REMARK 3 T TENSOR REMARK 3 T11: 0.2189 T22: 0.1760 REMARK 3 T33: 0.2232 T12: 0.0221 REMARK 3 T13: 0.0591 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 2.6339 L22: 2.0114 REMARK 3 L33: 1.2059 L12: -0.0467 REMARK 3 L13: 0.0102 L23: 0.1278 REMARK 3 S TENSOR REMARK 3 S11: -0.1821 S12: -0.2112 S13: -0.0341 REMARK 3 S21: 0.3104 S22: -0.0280 S23: 0.3858 REMARK 3 S31: 0.0781 S32: -0.0604 S33: 0.1503 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VFA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000227329. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0-7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76689 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.49800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5U8K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 22.5% JEFFAMINE ED REMARK 280 -2001 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 71.41800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.85400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 71.41800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.85400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 506 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 470 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 126 REMARK 465 HIS A 127 REMARK 465 ASP A 128 REMARK 465 SER A 129 REMARK 465 LEU A 130 REMARK 465 MET A 131 REMARK 465 LYS A 132 REMARK 465 VAL A 133 REMARK 465 ALA A 191 REMARK 465 MET B 1 REMARK 465 ASP B 128 REMARK 465 SER B 129 REMARK 465 LEU B 130 REMARK 465 MET B 131 REMARK 465 LYS B 132 REMARK 465 VAL B 133 REMARK 465 PRO B 134 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR B 188 O HOH B 301 1.41 REMARK 500 HH11 ARG B 202 O HOH B 304 1.52 REMARK 500 HZ3 LYS A 214 O HOH A 303 1.56 REMARK 500 HH11 ARG A 119 O HOH A 304 1.59 REMARK 500 O HOH A 521 O HOH A 531 1.83 REMARK 500 O HOH A 455 O HOH A 544 1.91 REMARK 500 O HOH B 469 O HOH B 531 1.95 REMARK 500 O HOH B 498 O HOH B 538 2.04 REMARK 500 O HOH A 528 O HOH A 544 2.05 REMARK 500 NE2 GLN A 36 O HOH A 301 2.06 REMARK 500 O HOH B 333 O HOH B 391 2.06 REMARK 500 O HOH A 354 O HOH A 531 2.08 REMARK 500 O HOH A 391 O HOH A 513 2.08 REMARK 500 O HOH A 518 O HOH B 457 2.10 REMARK 500 O HOH B 331 O HOH B 540 2.11 REMARK 500 O HOH A 528 O HOH A 566 2.14 REMARK 500 O HOH A 421 O HOH A 557 2.17 REMARK 500 O HOH A 306 O HOH A 454 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 511 O HOH B 538 1544 1.76 REMARK 500 O HOH A 508 O HOH B 510 1554 1.84 REMARK 500 O HOH A 472 O HOH B 493 1544 2.01 REMARK 500 O HOH A 534 O HOH B 498 2746 2.08 REMARK 500 O HOH B 573 O HOH B 574 2756 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 138 -120.24 49.88 REMARK 500 TYR A 188 -7.26 79.15 REMARK 500 VAL A 223 -63.32 -131.88 REMARK 500 ARG B 138 -127.79 57.07 REMARK 500 TYR B 188 -3.06 78.82 REMARK 500 VAL B 223 -62.47 -128.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 583 DISTANCE = 6.03 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5U8K RELATED DB: PDB REMARK 900 5U8K HAS A DIFFERENT MUTATION DBREF 5VFA A 1 229 UNP Q8DR53 Q8DR53_STRR6 1 229 DBREF 5VFA B 1 229 UNP Q8DR53 Q8DR53_STRR6 1 229 SEQADV 5VFA ASP A 128 UNP Q8DR53 CYS 128 ENGINEERED MUTATION SEQADV 5VFA GLY A 230 UNP Q8DR53 EXPRESSION TAG SEQADV 5VFA ASP B 128 UNP Q8DR53 CYS 128 ENGINEERED MUTATION SEQADV 5VFA GLY B 230 UNP Q8DR53 EXPRESSION TAG SEQRES 1 A 230 MET GLY LYS ARG ILE LEU LEU LEU GLU LYS GLU ARG ASN SEQRES 2 A 230 LEU ALA HIS PHE LEU SER LEU GLU LEU GLN LYS GLU GLN SEQRES 3 A 230 TYR ARG VAL ASP LEU VAL GLU GLU GLY GLN LYS ALA LEU SEQRES 4 A 230 SER MET ALA LEU GLN THR ASP TYR ASP LEU ILE LEU LEU SEQRES 5 A 230 ASN VAL ASN LEU GLY ASP MET MET ALA GLN ASP PHE ALA SEQRES 6 A 230 GLU LYS LEU SER ARG THR LYS PRO ALA SER VAL ILE MET SEQRES 7 A 230 ILE LEU ASP HIS TRP GLU ASP LEU GLN GLU GLU LEU GLU SEQRES 8 A 230 VAL VAL GLN ARG PHE ALA VAL SER TYR ILE TYR LYS PRO SEQRES 9 A 230 VAL LEU ILE GLU ASN LEU VAL ALA ARG ILE SER ALA ILE SEQRES 10 A 230 PHE ARG GLY ARG ASP PHE ILE ASP GLN HIS ASP SER LEU SEQRES 11 A 230 MET LYS VAL PRO ARG THR TYR ARG ASN LEU ARG ILE ASP SEQRES 12 A 230 VAL GLU HIS HIS THR VAL TYR ARG GLY GLU GLU MET ILE SEQRES 13 A 230 ALA LEU THR ARG ARG GLU TYR ASP LEU LEU ALA THR LEU SEQRES 14 A 230 MET GLY SER LYS LYS VAL LEU THR ARG GLU GLN LEU LEU SEQRES 15 A 230 GLU SER VAL TRP LYS TYR GLU SER ALA THR GLU THR ASN SEQRES 16 A 230 ILE VAL ASP VAL TYR ILE ARG TYR LEU ARG SER LYS LEU SEQRES 17 A 230 ASP VAL LYS GLY GLN LYS SER TYR ILE LYS THR VAL ARG SEQRES 18 A 230 GLY VAL GLY TYR THR MET GLN GLU GLY SEQRES 1 B 230 MET GLY LYS ARG ILE LEU LEU LEU GLU LYS GLU ARG ASN SEQRES 2 B 230 LEU ALA HIS PHE LEU SER LEU GLU LEU GLN LYS GLU GLN SEQRES 3 B 230 TYR ARG VAL ASP LEU VAL GLU GLU GLY GLN LYS ALA LEU SEQRES 4 B 230 SER MET ALA LEU GLN THR ASP TYR ASP LEU ILE LEU LEU SEQRES 5 B 230 ASN VAL ASN LEU GLY ASP MET MET ALA GLN ASP PHE ALA SEQRES 6 B 230 GLU LYS LEU SER ARG THR LYS PRO ALA SER VAL ILE MET SEQRES 7 B 230 ILE LEU ASP HIS TRP GLU ASP LEU GLN GLU GLU LEU GLU SEQRES 8 B 230 VAL VAL GLN ARG PHE ALA VAL SER TYR ILE TYR LYS PRO SEQRES 9 B 230 VAL LEU ILE GLU ASN LEU VAL ALA ARG ILE SER ALA ILE SEQRES 10 B 230 PHE ARG GLY ARG ASP PHE ILE ASP GLN HIS ASP SER LEU SEQRES 11 B 230 MET LYS VAL PRO ARG THR TYR ARG ASN LEU ARG ILE ASP SEQRES 12 B 230 VAL GLU HIS HIS THR VAL TYR ARG GLY GLU GLU MET ILE SEQRES 13 B 230 ALA LEU THR ARG ARG GLU TYR ASP LEU LEU ALA THR LEU SEQRES 14 B 230 MET GLY SER LYS LYS VAL LEU THR ARG GLU GLN LEU LEU SEQRES 15 B 230 GLU SER VAL TRP LYS TYR GLU SER ALA THR GLU THR ASN SEQRES 16 B 230 ILE VAL ASP VAL TYR ILE ARG TYR LEU ARG SER LYS LEU SEQRES 17 B 230 ASP VAL LYS GLY GLN LYS SER TYR ILE LYS THR VAL ARG SEQRES 18 B 230 GLY VAL GLY TYR THR MET GLN GLU GLY FORMUL 3 HOH *561(H2 O) HELIX 1 AA1 GLU A 11 GLU A 25 1 15 HELIX 2 AA2 GLU A 34 THR A 45 1 12 HELIX 3 AA3 MET A 60 ARG A 70 1 11 HELIX 4 AA4 HIS A 82 GLU A 89 1 8 HELIX 5 AA5 GLU A 89 ALA A 97 1 9 HELIX 6 AA6 LEU A 106 ASP A 125 1 20 HELIX 7 AA7 THR A 159 SER A 172 1 14 HELIX 8 AA8 THR A 177 TRP A 186 1 10 HELIX 9 AA9 THR A 194 ASP A 209 1 16 HELIX 10 AB1 GLU B 11 LYS B 24 1 14 HELIX 11 AB2 GLU B 34 THR B 45 1 12 HELIX 12 AB3 MET B 60 ARG B 70 1 11 HELIX 13 AB4 HIS B 82 GLU B 89 1 8 HELIX 14 AB5 GLU B 89 ALA B 97 1 9 HELIX 15 AB6 LEU B 106 ASP B 125 1 20 HELIX 16 AB7 THR B 159 GLY B 171 1 13 HELIX 17 AB8 THR B 177 TRP B 186 1 10 HELIX 18 AB9 THR B 194 ASP B 209 1 16 SHEET 1 AA1 5 ARG A 28 LEU A 31 0 SHEET 2 AA1 5 ARG A 4 LEU A 7 1 N ILE A 5 O ARG A 28 SHEET 3 AA1 5 LEU A 49 LEU A 52 1 O LEU A 51 N LEU A 6 SHEET 4 AA1 5 ILE A 77 ASP A 81 1 O MET A 78 N ILE A 50 SHEET 5 AA1 5 SER A 99 TYR A 102 1 O ILE A 101 N ILE A 79 SHEET 1 AA2 4 THR A 136 TYR A 137 0 SHEET 2 AA2 4 LEU A 140 ASP A 143 -1 O LEU A 140 N TYR A 137 SHEET 3 AA2 4 THR A 148 ARG A 151 -1 O THR A 148 N ASP A 143 SHEET 4 AA2 4 GLU A 154 ILE A 156 -1 O ILE A 156 N VAL A 149 SHEET 1 AA3 2 ILE A 217 VAL A 220 0 SHEET 2 AA3 2 GLY A 224 MET A 227 -1 O GLY A 224 N VAL A 220 SHEET 1 AA4 5 ARG B 28 LEU B 31 0 SHEET 2 AA4 5 ARG B 4 LEU B 8 1 N ILE B 5 O ASP B 30 SHEET 3 AA4 5 LEU B 49 LEU B 52 1 O LEU B 51 N LEU B 6 SHEET 4 AA4 5 ILE B 77 ASP B 81 1 O MET B 78 N ILE B 50 SHEET 5 AA4 5 SER B 99 TYR B 102 1 O ILE B 101 N ILE B 79 SHEET 1 AA5 4 THR B 136 TYR B 137 0 SHEET 2 AA5 4 LEU B 140 ASP B 143 -1 O LEU B 140 N TYR B 137 SHEET 3 AA5 4 THR B 148 ARG B 151 -1 O THR B 148 N ASP B 143 SHEET 4 AA5 4 GLU B 154 ILE B 156 -1 O ILE B 156 N VAL B 149 SHEET 1 AA6 2 ILE B 217 VAL B 220 0 SHEET 2 AA6 2 GLY B 224 MET B 227 -1 O GLY B 224 N VAL B 220 CISPEP 1 LYS A 103 PRO A 104 0 -4.53 CISPEP 2 LYS B 103 PRO B 104 0 -9.47 CRYST1 142.836 59.708 52.509 90.00 96.30 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007001 0.000000 0.000772 0.00000 SCALE2 0.000000 0.016748 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019160 0.00000