HEADER VIRAL PROTEIN 22-APR-17 5VKS TITLE CRYSTAL STRUCTURE OF P[19] ROTAVIRUS VP8* COMPLEXED WITH LNFPI COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER CAPSID PROTEIN VP4; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 64-223; COMPND 5 SYNONYM: VP8*; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ROTAVIRUS A; SOURCE 3 ORGANISM_TAXID: 10941; SOURCE 4 GENE: VP4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, P[19]VP8*, LNFPI, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.XU,Y.LIU,A.WOODRUFF,W.ZHONG,X.JIANG,M.A.KENNEDY REVDAT 5 04-OCT-23 5VKS 1 HETSYN LINK REVDAT 4 29-JUL-20 5VKS 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 11-DEC-19 5VKS 1 REMARK REVDAT 2 06-DEC-17 5VKS 1 JRNL REVDAT 1 08-NOV-17 5VKS 0 JRNL AUTH Y.LIU,S.XU,A.L.WOODRUFF,M.XIA,M.TAN,M.A.KENNEDY,X.JIANG JRNL TITL STRUCTURAL BASIS OF GLYCAN SPECIFICITY OF P[19] VP8*: JRNL TITL 2 IMPLICATIONS FOR ROTAVIRUS ZOONOSIS AND EVOLUTION. JRNL REF PLOS PATHOG. V. 13 06707 2017 JRNL REFN ESSN 1553-7374 JRNL PMID 29136651 JRNL DOI 10.1371/JOURNAL.PPAT.1006707 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 47104 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2417 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3477 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3320 REMARK 3 BIN FREE R VALUE SET COUNT : 196 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2562 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 150 REMARK 3 SOLVENT ATOMS : 198 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.47000 REMARK 3 B22 (A**2) : -1.47000 REMARK 3 B33 (A**2) : 2.94000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.113 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.404 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2776 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2404 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3796 ; 1.439 ; 1.932 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5640 ; 0.740 ; 2.944 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 318 ; 7.219 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 128 ;37.640 ;24.844 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 428 ;13.785 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;17.560 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 460 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2928 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 530 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 64 A 223 1 REMARK 3 1 B 64 B 223 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 1 A (A**2): 1281 ; 0.840 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5VKS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227584. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49456 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.941 REMARK 200 RESOLUTION RANGE LOW (A) : 29.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15800 REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.74100 REMARK 200 R SYM FOR SHELL (I) : 0.74100 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5GJ6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE, PH 5.6, 1.0 M LITHIUM SULFATE REMARK 280 MONOHYDRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 57.81550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 57.81550 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.91400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 57.81550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.45700 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 57.81550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 76.37100 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 57.81550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.81550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 50.91400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 57.81550 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 76.37100 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 57.81550 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 25.45700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 155 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG B 155 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 99 -59.94 -121.93 REMARK 500 THR B 99 -60.30 -124.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VKI RELATED DB: PDB DBREF 5VKS A 64 223 UNP A7YCM0 A7YCM0_9REOV 64 223 DBREF 5VKS B 64 223 UNP A7YCM0 A7YCM0_9REOV 64 223 SEQRES 1 A 160 VAL LEU ASP GLY PRO TYR GLN PRO VAL THR PHE LYS PRO SEQRES 2 A 160 PRO ASN ASP TYR TRP ILE LEU ILE ASN SER ASN SER ASN SEQRES 3 A 160 GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL TRP SEQRES 4 A 160 VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER GLU SEQRES 5 A 160 SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN ILE SEQRES 6 A 160 THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET GLU SEQRES 7 A 160 MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS LYS SEQRES 8 A 160 ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE LEU SEQRES 9 A 160 LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU THR SEQRES 10 A 160 PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN LEU SEQRES 11 A 160 ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR ILE SEQRES 12 A 160 ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR ILE SEQRES 13 A 160 ASN THR GLY LEU SEQRES 1 B 160 VAL LEU ASP GLY PRO TYR GLN PRO VAL THR PHE LYS PRO SEQRES 2 B 160 PRO ASN ASP TYR TRP ILE LEU ILE ASN SER ASN SER ASN SEQRES 3 B 160 GLY VAL VAL LEU GLU GLY THR ASN ASN THR ASP VAL TRP SEQRES 4 B 160 VAL ALA ILE ILE SER ILE GLU PRO ASN VAL ASN SER GLU SEQRES 5 B 160 SER ARG GLN TYR SER LEU PHE GLY VAL ASN LYS GLN ILE SEQRES 6 B 160 THR VAL VAL ASN THR SER ASN LYS TRP LYS PHE MET GLU SEQRES 7 B 160 MET PHE ARG ASN ASN SER ASN ALA GLU PHE GLN HIS LYS SEQRES 8 B 160 ARG THR LEU THR SER SER THR LYS LEU VAL GLY ILE LEU SEQRES 9 B 160 LYS HIS GLY GLY ARG LEU TRP THR TYR HIS GLY GLU THR SEQRES 10 B 160 PRO ASN ALA THR THR ASP TYR SER THR THR SER ASN LEU SEQRES 11 B 160 ASN GLU ILE SER VAL THR THR TYR ALA GLU PHE TYR ILE SEQRES 12 B 160 ILE PRO ARG SER GLN GLU SER LYS CYS THR GLU TYR ILE SEQRES 13 B 160 ASN THR GLY LEU HET GLC C 1 12 HET GAL C 2 11 HET NAG C 3 14 HET GAL C 4 11 HET FUC C 5 10 HET GLC D 1 12 HET GAL D 2 11 HET NAG D 3 14 HET GAL D 4 11 HET FUC D 5 10 HET SO4 A 301 5 HET GOL A 302 6 HET SO4 B 301 5 HET GOL B 302 6 HET GOL B 303 6 HET GOL B 304 6 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GLC 2(C6 H12 O6) FORMUL 3 GAL 4(C6 H12 O6) FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 3 FUC 2(C6 H12 O5) FORMUL 5 SO4 2(O4 S 2-) FORMUL 6 GOL 4(C3 H8 O3) FORMUL 11 HOH *198(H2 O) HELIX 1 AA1 GLN A 211 GLY A 222 1 12 HELIX 2 AA2 GLN B 211 GLY B 222 1 12 SHEET 1 AA111 ASP A 66 TYR A 69 0 SHEET 2 AA111 PHE A 204 PRO A 208 -1 O PHE A 204 N TYR A 69 SHEET 3 AA111 TYR A 80 ASN A 85 -1 N TRP A 81 O ILE A 207 SHEET 4 AA111 LEU A 163 HIS A 169 -1 O VAL A 164 N ILE A 84 SHEET 5 AA111 ARG A 172 GLU A 179 -1 O TRP A 174 N LEU A 167 SHEET 6 AA111 GLN A 152 SER A 159 1 N THR A 158 O GLY A 178 SHEET 7 AA111 TRP A 137 ARG A 144 -1 N TRP A 137 O SER A 159 SHEET 8 AA111 TRP A 102 ILE A 108 -1 N ALA A 104 O MET A 142 SHEET 9 AA111 GLY A 90 THR A 96 -1 N VAL A 92 O ILE A 105 SHEET 10 AA111 SER A 197 THR A 200 -1 O THR A 199 N GLU A 94 SHEET 11 AA111 THR A 73 PHE A 74 -1 N PHE A 74 O VAL A 198 SHEET 1 AA2 6 ASP A 66 TYR A 69 0 SHEET 2 AA2 6 PHE A 204 PRO A 208 -1 O PHE A 204 N TYR A 69 SHEET 3 AA2 6 TYR A 80 ASN A 85 -1 N TRP A 81 O ILE A 207 SHEET 4 AA2 6 LEU A 163 HIS A 169 -1 O VAL A 164 N ILE A 84 SHEET 5 AA2 6 ARG A 172 GLU A 179 -1 O TRP A 174 N LEU A 167 SHEET 6 AA2 6 THR A 184 THR A 189 -1 O THR A 184 N HIS A 177 SHEET 1 AA3 2 VAL A 112 LEU A 121 0 SHEET 2 AA3 2 VAL A 124 ASN A 132 -1 O ASN A 132 N VAL A 112 SHEET 1 AA4 8 THR B 73 PHE B 74 0 SHEET 2 AA4 8 SER B 197 THR B 200 -1 O VAL B 198 N PHE B 74 SHEET 3 AA4 8 GLY B 90 THR B 96 -1 N GLU B 94 O THR B 199 SHEET 4 AA4 8 TRP B 102 ILE B 108 -1 O ILE B 105 N VAL B 92 SHEET 5 AA4 8 TRP B 137 ARG B 144 -1 O MET B 142 N ALA B 104 SHEET 6 AA4 8 GLN B 152 SER B 159 -1 O SER B 159 N TRP B 137 SHEET 7 AA4 8 ARG B 172 GLU B 179 1 O GLY B 178 N THR B 158 SHEET 8 AA4 8 THR B 184 THR B 189 -1 O THR B 184 N HIS B 177 SHEET 1 AA510 THR B 73 PHE B 74 0 SHEET 2 AA510 SER B 197 THR B 200 -1 O VAL B 198 N PHE B 74 SHEET 3 AA510 GLY B 90 THR B 96 -1 N GLU B 94 O THR B 199 SHEET 4 AA510 TRP B 102 ILE B 108 -1 O ILE B 105 N VAL B 92 SHEET 5 AA510 TRP B 137 ARG B 144 -1 O MET B 142 N ALA B 104 SHEET 6 AA510 GLN B 152 SER B 159 -1 O SER B 159 N TRP B 137 SHEET 7 AA510 ARG B 172 GLU B 179 1 O GLY B 178 N THR B 158 SHEET 8 AA510 LEU B 163 HIS B 169 -1 N LEU B 167 O TRP B 174 SHEET 9 AA510 TYR B 80 ASN B 85 -1 N ILE B 84 O VAL B 164 SHEET 10 AA510 PHE B 204 PRO B 208 -1 O ILE B 207 N TRP B 81 SHEET 1 AA6 2 VAL B 112 LEU B 121 0 SHEET 2 AA6 2 VAL B 124 ASN B 132 -1 O VAL B 124 N LEU B 121 LINK O4 GLC C 1 C1 GAL C 2 1555 1555 1.41 LINK O3 GAL C 2 C1 NAG C 3 1555 1555 1.40 LINK O3 NAG C 3 C1 GAL C 4 1555 1555 1.40 LINK O2 GAL C 4 C1 FUC C 5 1555 1555 1.41 LINK O4 GLC D 1 C1 GAL D 2 1555 1555 1.41 LINK O3 GAL D 2 C1 NAG D 3 1555 1555 1.40 LINK O3 NAG D 3 C1 GAL D 4 1555 1555 1.40 LINK O2 GAL D 4 C1 FUC D 5 1555 1555 1.41 CISPEP 1 GLY A 67 PRO A 68 0 7.04 CISPEP 2 THR A 180 PRO A 181 0 1.14 CISPEP 3 GLY B 67 PRO B 68 0 4.90 CISPEP 4 THR B 180 PRO B 181 0 5.85 CRYST1 115.631 115.631 101.828 90.00 90.00 90.00 I 41 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008648 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008648 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009820 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 1.000000 -0.000073 0.000159 -0.00239 1 MTRIX2 2 -0.000073 -1.000000 -0.000010 -57.81523 1 MTRIX3 2 0.000159 0.000010 -1.000000 6.58316 1