HEADER DE NOVO PROTEIN 24-APR-17 5VL4 TITLE ACCIDENTAL MINIMUM CONTACT CRYSTAL LATTICE FORMED BY A REDESIGNED TITLE 2 PROTEIN OLIGOMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: T33-53H-B; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOPLASMA ACIDOPHILUM; SOURCE 3 ORGANISM_TAXID: 2303; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET29B KEYWDS BIONANOTECHNOLOGY, SYMMETRY, BIOMATERIALS, DE NOVO PROTEIN, KEYWDS 2 COMPUTATIONAL DESIGN, ROSETTA, SELF-ASSEMBLY, NANOMATERIAL, KEYWDS 3 SOLUBILITY EXPDTA X-RAY DIFFRACTION AUTHOR K.A.CANNON,D.CASCIO,M.R.SAWAYA,R.PARK,S.BOYKEN,N.KING,T.YEATES REVDAT 3 04-OCT-23 5VL4 1 REMARK REVDAT 2 02-SEP-20 5VL4 1 JRNL REVDAT 1 23-MAY-18 5VL4 0 JRNL AUTH K.A.CANNON,R.U.PARK,S.E.BOYKEN,U.NATTERMANN,S.YI,D.BAKER, JRNL AUTH 2 N.P.KING,T.O.YEATES JRNL TITL DESIGN AND STRUCTURE OF TWO NEW PROTEIN CAGES ILLUSTRATE JRNL TITL 2 SUCCESSES AND ONGOING CHALLENGES IN PROTEIN ENGINEERING. JRNL REF PROTEIN SCI. V. 29 919 2020 JRNL REFN ESSN 1469-896X JRNL PMID 31840320 JRNL DOI 10.1002/PRO.3802 REMARK 2 REMARK 2 RESOLUTION. 4.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 97.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 3551 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 355 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 4.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 4.58 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.90 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 990 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2839 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 891 REMARK 3 BIN R VALUE (WORKING SET) : 0.2792 REMARK 3 BIN FREE R VALUE : 0.3242 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 99 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1178 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 135.4 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 267.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.540 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.612 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.837 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1195 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1614 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 437 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 29 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 172 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1195 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 159 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1536 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.24 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.46 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 23.24 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -32.2601 -18.1027 -12.0729 REMARK 3 T TENSOR REMARK 3 T11: -0.1781 T22: 0.0840 REMARK 3 T33: 0.2918 T12: -0.0459 REMARK 3 T13: 0.0892 T23: 0.1678 REMARK 3 L TENSOR REMARK 3 L11: 1.7280 L22: 3.9771 REMARK 3 L33: 4.2493 L12: 1.3039 REMARK 3 L13: -3.8645 L23: -1.0559 REMARK 3 S TENSOR REMARK 3 S11: 0.0033 S12: 0.0099 S13: 0.0201 REMARK 3 S21: -0.0143 S22: 0.0580 S23: 0.1010 REMARK 3 S31: -0.1104 S32: 0.0272 S33: -0.0613 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VL4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3554 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.100 REMARK 200 RESOLUTION RANGE LOW (A) : 97.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.992 REMARK 200 R MERGE (I) : 0.14700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.98 REMARK 200 R MERGE FOR SHELL (I) : 0.77600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 1NOG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA CITRATE PH 5.6, 2.5M 1,6 REMARK 280 -HEXANEDIOL, 0.01M MANGANESE CHLORIDE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.19000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.19000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.19000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.19000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 69.19000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 69.19000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 69.19000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 69.19000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 69.19000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 69.19000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 69.19000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 69.19000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 69.19000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 69.19000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 69.19000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 69.19000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 69.19000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 69.19000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 69.19000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 69.19000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 69.19000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 69.19000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 69.19000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 69.19000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 69.19000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 24-MERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -69.19000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 69.19000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 69.19000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 -69.19000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 69.19000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -69.19000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 69.19000 REMARK 350 BIOMT2 6 -1.000000 0.000000 0.000000 -69.19000 REMARK 350 BIOMT3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 -69.19000 REMARK 350 BIOMT2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 69.19000 REMARK 350 BIOMT1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 69.19000 REMARK 350 BIOMT3 8 0.000000 -1.000000 0.000000 -69.19000 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 69.19000 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 -69.19000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 69.19000 REMARK 350 BIOMT2 11 0.000000 0.000000 -1.000000 -69.19000 REMARK 350 BIOMT3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.000000 -1.000000 0.000000 -69.19000 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 12 1.000000 0.000000 0.000000 69.19000 REMARK 350 BIOMT1 13 1.000000 0.000000 0.000000 -69.19000 REMARK 350 BIOMT2 13 0.000000 1.000000 0.000000 69.19000 REMARK 350 BIOMT3 13 0.000000 0.000000 1.000000 69.19000 REMARK 350 BIOMT1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 14 0.000000 -1.000000 0.000000 -69.19000 REMARK 350 BIOMT3 14 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 15 -1.000000 0.000000 0.000000 -69.19000 REMARK 350 BIOMT2 15 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 -69.19000 REMARK 350 BIOMT1 17 0.000000 0.000000 1.000000 -69.19000 REMARK 350 BIOMT2 17 1.000000 0.000000 0.000000 69.19000 REMARK 350 BIOMT3 17 0.000000 1.000000 0.000000 69.19000 REMARK 350 BIOMT1 18 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 18 0.000000 -1.000000 0.000000 -69.19000 REMARK 350 BIOMT1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 19 -1.000000 0.000000 0.000000 -69.19000 REMARK 350 BIOMT3 19 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 20 0.000000 0.000000 -1.000000 -69.19000 REMARK 350 BIOMT2 20 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 21 0.000000 1.000000 0.000000 -69.19000 REMARK 350 BIOMT2 21 0.000000 0.000000 1.000000 69.19000 REMARK 350 BIOMT3 21 1.000000 0.000000 0.000000 69.19000 REMARK 350 BIOMT1 22 0.000000 -1.000000 0.000000 -69.19000 REMARK 350 BIOMT2 22 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 23 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 23 -1.000000 0.000000 0.000000 -69.19000 REMARK 350 BIOMT1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 24 0.000000 0.000000 -1.000000 -69.19000 REMARK 350 BIOMT3 24 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 PHE A -20 REMARK 465 THR A -19 REMARK 465 ARG A -18 REMARK 465 ARG A -17 REMARK 465 GLY A -16 REMARK 465 ASP A -15 REMARK 465 GLN A -14 REMARK 465 GLY A -13 REMARK 465 GLU A -12 REMARK 465 THR A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 ALA A -8 REMARK 465 ASN A -7 REMARK 465 ARG A -6 REMARK 465 ALA A -5 REMARK 465 ARG A -4 REMARK 465 VAL A -3 REMARK 465 GLY A -2 REMARK 465 LYS A -1 REMARK 465 ASP A 0 REMARK 465 SER A 150 REMARK 465 ILE A 151 REMARK 465 HIS A 152 REMARK 465 ARG A 153 REMARK 465 VAL A 154 REMARK 465 SER A 155 REMARK 465 LEU A 156 REMARK 465 GLU A 157 REMARK 465 HIS A 158 REMARK 465 HIS A 159 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 54 89.15 -56.56 REMARK 500 LYS A 77 99.80 -64.04 REMARK 500 LEU A 113 -71.39 -78.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CY5 RELATED DB: PDB REMARK 900 5CY5 IS A 2-COMPONENT DESIGNED TETRAHEDRAL CAGE FORMED FROM REMARK 900 PROTEINS HOMOLOGOUS TO THE PROTEIN IN THIS DEPOSITION DBREF 5VL4 A -21 163 PDB 5VL4 5VL4 -21 163 SEQRES 1 A 185 MET PHE THR ARG ARG GLY ASP GLN GLY GLU THR ASP LEU SEQRES 2 A 185 ALA ASN ARG ALA ARG VAL GLY LYS ASP SER PRO VAL VAL SEQRES 3 A 185 GLU VAL GLN GLY THR ILE ASP GLU LEU ASN SER PHE ILE SEQRES 4 A 185 GLY TYR ALA LEU VAL LEU SER ARG TRP ASP ASP ILE ARG SEQRES 5 A 185 ASN ASP LEU PHE ARG ILE GLN ASN ASP LEU PHE VAL LEU SEQRES 6 A 185 GLY GLU ASP VAL SER THR GLY GLY LYS GLY ARG THR VAL SEQRES 7 A 185 THR LEU GLU MET ILE LEU TYR LEU VAL GLU ARG VAL THR SEQRES 8 A 185 GLU MET LYS ALA GLU ILE GLY LYS ILE GLU LEU PHE VAL SEQRES 9 A 185 VAL PRO GLY GLY SER VAL GLU SER ALA SER LEU HIS MET SEQRES 10 A 185 ALA ARG ALA VAL SER ARG ARG LEU GLU ARG ARG ILE LYS SEQRES 11 A 185 ALA ALA SER ARG LEU THR GLU ILE ASN ASP ASN VAL LEU SEQRES 12 A 185 LEU TYR ALA ALA MET LEU SER SER ILE LEU PHE MET HIS SEQRES 13 A 185 ALA LEU ILE SER ASN LYS ARG LEU ASN ILE PRO GLU LYS SEQRES 14 A 185 ILE TRP SER ILE HIS ARG VAL SER LEU GLU HIS HIS HIS SEQRES 15 A 185 HIS HIS HIS HELIX 1 AA1 VAL A 3 SER A 24 1 22 HELIX 2 AA2 TRP A 26 THR A 49 1 24 HELIX 3 AA3 THR A 57 GLY A 76 1 20 HELIX 4 AA4 SER A 87 THR A 114 1 28 HELIX 5 AA5 ASN A 117 LEU A 142 1 26 CRYST1 138.380 138.380 138.380 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007226 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007226 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007226 0.00000