HEADER PROTEIN BINDING 01-MAY-17 5VNT TITLE SOLUTION NMR STRUCTURE OF THE C-TERMINAL HEADPIECE DOMAIN OF VILLIN 4 TITLE 2 FROM A.THALIANA, THE FIRST NON-VERTEBRATE HEADPIECE STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: VILLIN-4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 921-983; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: VLN4, AT4G30160, F6G3.190, F9N11.10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS VILLIN, HEADPIECE, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR H.L.MIEARS,S.L.SMIRNOV REVDAT 5 15-MAY-24 5VNT 1 REMARK REVDAT 4 14-JUN-23 5VNT 1 REMARK REVDAT 3 28-MAR-18 5VNT 1 JRNL REVDAT 2 07-MAR-18 5VNT 1 JRNL REVDAT 1 10-MAY-17 5VNT 0 JRNL AUTH H.L.MIEARS,D.R.GRUBER,N.M.HORVATH,J.M.ANTOS,J.YOUNG, JRNL AUTH 2 J.P.SIGURJONSSON,M.L.KLEM,E.A.ROSENKRANZ,M.OKON, JRNL AUTH 3 C.J.MCKNIGHT,L.VUGMEYSTER,S.L.SMIRNOV JRNL TITL PLANT VILLIN HEADPIECE DOMAIN DEMONSTRATES A NOVEL SURFACE JRNL TITL 2 CHARGE PATTERN AND HIGH AFFINITY FOR F-ACTIN. JRNL REF BIOCHEMISTRY V. 57 1690 2018 JRNL REFN ISSN 1520-4995 JRNL PMID 29444403 JRNL DOI 10.1021/ACS.BIOCHEM.7B00856 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VNT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227589. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.0 MM ATVHP, 20.0 MM PIPES, 50 REMARK 210 MM SODIUM CHLORIDE, 0.01 % REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O; REMARK 210 1.0 MM ATVHP, 20.0 MM PIPES, 50 REMARK 210 MM SODIUM CHLORIDE, 0.01 % REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N-HSQC; 13C-HSQC; 3D HNCACB; REMARK 210 3D CBCA(CO)NH; 3D HNCO; 3D HN(CA) REMARK 210 CO; 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D C(CO)NH; 3D HCC(CO) REMARK 210 NH; 3D HBHA(CO)NH; 2D HBCBCGCDHD REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 8.9, TOPSPIN 3.1, REMARK 210 NMRVIEW 9.0 REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 10 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 38 74.82 66.61 REMARK 500 1 ASP A 40 98.31 -46.27 REMARK 500 1 THR A 60 -171.91 -68.10 REMARK 500 2 ASP A 38 75.11 68.37 REMARK 500 2 ASP A 40 97.46 -46.18 REMARK 500 2 THR A 60 -171.29 -68.36 REMARK 500 3 ASP A 38 68.81 67.16 REMARK 500 3 ILE A 39 -169.38 -122.02 REMARK 500 3 ASP A 40 98.80 -46.20 REMARK 500 3 THR A 60 172.41 -58.88 REMARK 500 4 ASP A 38 83.12 68.35 REMARK 500 4 ASP A 40 97.17 -46.24 REMARK 500 4 THR A 60 -172.79 -67.07 REMARK 500 5 ASP A 38 76.39 69.62 REMARK 500 5 ASP A 40 98.23 -47.10 REMARK 500 6 ASP A 38 75.52 69.47 REMARK 500 6 ASP A 40 97.66 -46.69 REMARK 500 7 ASP A 38 76.37 68.54 REMARK 500 7 ASP A 40 98.53 -47.04 REMARK 500 8 ASP A 38 75.77 69.36 REMARK 500 8 ASP A 40 97.99 -46.89 REMARK 500 8 THR A 60 -174.66 -67.12 REMARK 500 9 ASP A 38 78.87 67.98 REMARK 500 9 ASP A 40 98.32 -46.71 REMARK 500 9 THR A 60 -174.93 -67.00 REMARK 500 10 ASP A 38 77.56 68.69 REMARK 500 10 ASP A 40 98.14 -46.51 REMARK 500 10 THR A 60 -173.38 -67.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30289 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF THE C-TERMINAL HEADPIECE DOMAIN OF VILLIN REMARK 900 4 FROM A.THALIANA, THE FIRST NON-VERTEBRATE HEADPIECE STRUCTURE DBREF 5VNT A 20 82 UNP O65570 VILI4_ARATH 921 983 SEQRES 1 A 63 LEU PRO ALA HIS PRO TYR ASP ARG LEU LYS THR THR SER SEQRES 2 A 63 THR ASP PRO VAL SER ASP ILE ASP VAL THR ARG ARG GLU SEQRES 3 A 63 ALA TYR LEU SER SER GLU GLU PHE LYS GLU LYS PHE GLY SEQRES 4 A 63 MET THR LYS GLU ALA PHE TYR LYS LEU PRO LYS TRP LYS SEQRES 5 A 63 GLN ASN LYS PHE LYS MET ALA VAL GLN LEU PHE HELIX 1 AA1 ASP A 40 LEU A 48 5 9 HELIX 2 AA2 SER A 49 GLY A 58 1 10 HELIX 3 AA3 THR A 60 LEU A 67 1 8 HELIX 4 AA4 PRO A 68 VAL A 79 1 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1