HEADER TRANSCRIPTION/DNA 04-MAY-17 5VPE TITLE TRANSCRIPTION FACTOR FOSB/JUND BZIP DOMAIN IN COMPLEX WITH COGNATE TITLE 2 DNA, TYPE-I CRYSTAL COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN FOSB; COMPND 3 CHAIN: C, A; COMPND 4 FRAGMENT: UNP RESIDUES 153-219; COMPND 5 SYNONYM: G0/G1 SWITCH REGULATORY PROTEIN 3; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TRANSCRIPTION FACTOR JUN-D; COMPND 9 CHAIN: D, B; COMPND 10 FRAGMENT: UNP RESIDUES 266-332; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(*CP*GP*TP*CP*GP*GP*TP*GP*AP*CP*TP*CP*AP*CP*CP*GP*AP*CP*G)-3'); COMPND 15 CHAIN: G, E; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: DNA (5'- COMPND 19 D(*CP*GP*TP*CP*GP*GP*TP*GP*AP*GP*TP*CP*AP*CP*CP*GP*AP*CP*G)-3'); COMPND 20 CHAIN: H, F; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FOSB, G0S3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21-NESG; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: JUND; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET21A; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 MOL_ID: 4; SOURCE 26 SYNTHETIC: YES; SOURCE 27 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 28 ORGANISM_TAXID: 9606 KEYWDS ACTIVATOR PROTEIN-1, BASIC LEUCINE ZIPPER, BZIP, FOS, JUN, KEYWDS 2 TRANSCRIPTION FACTOR, DNA-BINDING PROTEIN, REDOX SWITCH, COILED- KEYWDS 3 COIL, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.YIN,M.MACHIUS,G.RUDENKO REVDAT 5 04-OCT-23 5VPE 1 REMARK REVDAT 4 11-DEC-19 5VPE 1 REMARK REVDAT 3 15-NOV-17 5VPE 1 JRNL REVDAT 2 18-OCT-17 5VPE 1 JRNL REVDAT 1 06-SEP-17 5VPE 0 JRNL AUTH Z.YIN,M.MACHIUS,E.J.NESTLER,G.RUDENKO JRNL TITL ACTIVATOR PROTEIN-1: REDOX SWITCH CONTROLLING STRUCTURE AND JRNL TITL 2 DNA-BINDING. JRNL REF NUCLEIC ACIDS RES. V. 45 11425 2017 JRNL REFN ESSN 1362-4962 JRNL PMID 28981703 JRNL DOI 10.1093/NAR/GKX795 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.5 REMARK 3 NUMBER OF REFLECTIONS : 53064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.770 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.3194 - 4.9473 0.97 4138 162 0.2145 0.2524 REMARK 3 2 4.9473 - 3.9274 0.99 4179 164 0.1732 0.2207 REMARK 3 3 3.9274 - 3.4312 0.97 4091 160 0.1843 0.2052 REMARK 3 4 3.4312 - 3.1175 0.98 4072 160 0.2087 0.2668 REMARK 3 5 3.1175 - 2.8941 0.99 4142 163 0.2355 0.2611 REMARK 3 6 2.8941 - 2.7235 0.99 4118 160 0.2436 0.2716 REMARK 3 7 2.7235 - 2.5871 0.97 4050 159 0.2378 0.2674 REMARK 3 8 2.5871 - 2.4745 0.99 4093 161 0.2365 0.2650 REMARK 3 9 2.4745 - 2.3792 0.97 4046 158 0.2425 0.2978 REMARK 3 10 2.3792 - 2.2971 0.90 3743 146 0.2458 0.3043 REMARK 3 11 2.2971 - 2.2253 0.79 3306 130 0.2475 0.2595 REMARK 3 12 2.2253 - 2.1617 0.69 2834 110 0.2655 0.2669 REMARK 3 13 2.1617 - 2.1048 0.62 2557 101 0.2864 0.2927 REMARK 3 14 2.1048 - 2.0534 0.41 1695 66 0.2998 0.3857 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3990 REMARK 3 ANGLE : 0.747 5638 REMARK 3 CHIRALITY : 0.036 631 REMARK 3 PLANARITY : 0.003 479 REMARK 3 DIHEDRAL : 20.771 2289 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 153 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.0801 -7.5777 108.0989 REMARK 3 T TENSOR REMARK 3 T11: 0.3168 T22: 0.2768 REMARK 3 T33: 0.2450 T12: -0.2253 REMARK 3 T13: 0.0921 T23: -0.1844 REMARK 3 L TENSOR REMARK 3 L11: 0.2029 L22: 0.3370 REMARK 3 L33: 5.2113 L12: -0.1862 REMARK 3 L13: -0.4450 L23: 0.5059 REMARK 3 S TENSOR REMARK 3 S11: -0.0110 S12: -0.0402 S13: 0.1482 REMARK 3 S21: 0.0443 S22: -0.2117 S23: -0.0562 REMARK 3 S31: -0.2305 S32: 0.2177 S33: 0.0079 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 265 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.7705 -15.8024 107.2282 REMARK 3 T TENSOR REMARK 3 T11: 0.2881 T22: 0.1672 REMARK 3 T33: 0.1999 T12: -0.1291 REMARK 3 T13: 0.1087 T23: -0.0666 REMARK 3 L TENSOR REMARK 3 L11: 2.4873 L22: 0.5752 REMARK 3 L33: 5.8853 L12: 0.7289 REMARK 3 L13: -3.3542 L23: -1.3677 REMARK 3 S TENSOR REMARK 3 S11: -0.0330 S12: 0.1238 S13: 0.1009 REMARK 3 S21: -0.0383 S22: 0.0488 S23: -0.0995 REMARK 3 S31: 0.0184 S32: 0.2940 S33: -0.0025 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 2 THROUGH 6 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1541 -10.2071 138.9993 REMARK 3 T TENSOR REMARK 3 T11: 0.3576 T22: 0.8998 REMARK 3 T33: 0.8181 T12: -0.1276 REMARK 3 T13: -0.2339 T23: -0.1340 REMARK 3 L TENSOR REMARK 3 L11: 2.7642 L22: 2.3400 REMARK 3 L33: 2.8762 L12: -1.5182 REMARK 3 L13: 1.8795 L23: 0.1484 REMARK 3 S TENSOR REMARK 3 S11: -0.2058 S12: -0.9571 S13: 0.1387 REMARK 3 S21: 0.7872 S22: -0.0938 S23: -1.0750 REMARK 3 S31: -0.5002 S32: 0.6880 S33: 0.3253 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 7 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.1441 -12.4087 129.4877 REMARK 3 T TENSOR REMARK 3 T11: 0.2623 T22: 0.1197 REMARK 3 T33: 0.3091 T12: -0.0190 REMARK 3 T13: 0.0010 T23: -0.0791 REMARK 3 L TENSOR REMARK 3 L11: 2.2842 L22: 2.5184 REMARK 3 L33: 2.5993 L12: 1.6791 REMARK 3 L13: 0.2496 L23: -0.2040 REMARK 3 S TENSOR REMARK 3 S11: -0.0238 S12: -0.0605 S13: 0.3703 REMARK 3 S21: -0.0905 S22: 0.2280 S23: 0.0097 REMARK 3 S31: -0.2763 S32: 0.0245 S33: -0.1399 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 17 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -66.2743 -14.1117 116.5837 REMARK 3 T TENSOR REMARK 3 T11: 0.2983 T22: 0.3840 REMARK 3 T33: 0.3817 T12: -0.1412 REMARK 3 T13: 0.0367 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 2.7715 L22: 2.1733 REMARK 3 L33: 6.3532 L12: 2.1720 REMARK 3 L13: -3.9366 L23: -3.2686 REMARK 3 S TENSOR REMARK 3 S11: -0.9227 S12: 1.1372 S13: -0.3351 REMARK 3 S21: -1.0565 S22: 0.2965 S23: -0.8724 REMARK 3 S31: -0.2846 S32: 0.1859 S33: 0.5747 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.5709 -13.3640 129.7484 REMARK 3 T TENSOR REMARK 3 T11: 0.2470 T22: 0.0968 REMARK 3 T33: 0.2968 T12: -0.0482 REMARK 3 T13: -0.0078 T23: -0.0478 REMARK 3 L TENSOR REMARK 3 L11: 4.2193 L22: 1.5413 REMARK 3 L33: 2.8597 L12: 1.2614 REMARK 3 L13: 2.1459 L23: 0.4091 REMARK 3 S TENSOR REMARK 3 S11: 0.0303 S12: -0.2597 S13: -0.1661 REMARK 3 S21: 0.0148 S22: 0.1912 S23: -0.2056 REMARK 3 S31: 0.0707 S32: 0.0366 S33: -0.2056 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 16 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.3751 -14.5701 133.7590 REMARK 3 T TENSOR REMARK 3 T11: 0.3391 T22: 1.1868 REMARK 3 T33: 1.1278 T12: -0.0778 REMARK 3 T13: -0.2458 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 2.0000 L22: 1.2678 REMARK 3 L33: 5.3534 L12: -2.8768 REMARK 3 L13: -0.6501 L23: -1.3568 REMARK 3 S TENSOR REMARK 3 S11: -0.0292 S12: 0.4349 S13: 0.0486 REMARK 3 S21: -0.0277 S22: 0.1895 S23: -0.6126 REMARK 3 S31: -0.1538 S32: 0.7049 S33: -0.1845 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): -71.8272 -38.3745 88.1260 REMARK 3 T TENSOR REMARK 3 T11: 0.3288 T22: 0.2792 REMARK 3 T33: 0.2621 T12: -0.1523 REMARK 3 T13: 0.0946 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 4.1817 L22: 0.5811 REMARK 3 L33: 4.2043 L12: 1.3138 REMARK 3 L13: -4.2020 L23: -1.4210 REMARK 3 S TENSOR REMARK 3 S11: -0.0516 S12: -0.2430 S13: -0.4667 REMARK 3 S21: -0.0381 S22: -0.1982 S23: 0.0607 REMARK 3 S31: 0.1968 S32: 0.1098 S33: 0.3426 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 265 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): -68.7005 -29.5295 90.0838 REMARK 3 T TENSOR REMARK 3 T11: 0.3397 T22: 0.3337 REMARK 3 T33: 0.2021 T12: -0.1555 REMARK 3 T13: 0.1029 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.2824 L22: 0.3193 REMARK 3 L33: 6.5641 L12: -0.4764 REMARK 3 L13: -2.6356 L23: 1.1724 REMARK 3 S TENSOR REMARK 3 S11: 0.1617 S12: 0.0726 S13: -0.0563 REMARK 3 S21: -0.0683 S22: 0.0972 S23: -0.0285 REMARK 3 S31: 0.0294 S32: -0.2619 S33: -0.1993 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 2 THROUGH 6 ) REMARK 3 ORIGIN FOR THE GROUP (A):-100.2146 -37.4599 100.5874 REMARK 3 T TENSOR REMARK 3 T11: 0.4383 T22: 0.8737 REMARK 3 T33: 0.6444 T12: -0.1064 REMARK 3 T13: -0.3588 T23: -0.0948 REMARK 3 L TENSOR REMARK 3 L11: 1.5250 L22: 2.2130 REMARK 3 L33: 1.1399 L12: -0.3981 REMARK 3 L13: 1.0272 L23: -0.4372 REMARK 3 S TENSOR REMARK 3 S11: -0.0510 S12: 0.3177 S13: -0.3131 REMARK 3 S21: -0.4097 S22: 0.0474 S23: 0.8644 REMARK 3 S31: 0.0699 S32: -0.7569 S33: -0.0835 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 7 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -79.4712 -33.3521 113.2224 REMARK 3 T TENSOR REMARK 3 T11: 0.2472 T22: 0.2651 REMARK 3 T33: 0.2417 T12: -0.1077 REMARK 3 T13: -0.0039 T23: 0.0313 REMARK 3 L TENSOR REMARK 3 L11: 7.3978 L22: 3.1515 REMARK 3 L33: 1.6106 L12: 0.9757 REMARK 3 L13: 1.6311 L23: 1.4474 REMARK 3 S TENSOR REMARK 3 S11: 0.1302 S12: -0.0338 S13: -0.3902 REMARK 3 S21: -0.0357 S22: 0.2612 S23: 0.0612 REMARK 3 S31: 0.2690 S32: -0.0209 S33: -0.3083 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 17 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.1488 -30.7201 119.9631 REMARK 3 T TENSOR REMARK 3 T11: 0.4228 T22: 0.2832 REMARK 3 T33: 0.2407 T12: -0.0232 REMARK 3 T13: -0.0894 T23: -0.0643 REMARK 3 L TENSOR REMARK 3 L11: 2.3992 L22: 2.3946 REMARK 3 L33: 1.8411 L12: 1.1275 REMARK 3 L13: 0.9578 L23: 2.0991 REMARK 3 S TENSOR REMARK 3 S11: -0.1565 S12: 0.8209 S13: -0.6007 REMARK 3 S21: -0.9810 S22: 0.2438 S23: -0.0445 REMARK 3 S31: -0.5769 S32: 0.2847 S33: -0.0729 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): -66.3794 -30.3006 124.5962 REMARK 3 T TENSOR REMARK 3 T11: 0.2125 T22: 0.4041 REMARK 3 T33: 0.2937 T12: -0.1114 REMARK 3 T13: -0.0292 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 4.4002 L22: 3.7193 REMARK 3 L33: 9.5321 L12: -1.4803 REMARK 3 L13: 5.9580 L23: 0.1675 REMARK 3 S TENSOR REMARK 3 S11: -0.3759 S12: -0.2658 S13: -0.0926 REMARK 3 S21: 0.2721 S22: -0.1172 S23: 0.3243 REMARK 3 S31: -0.4751 S32: -0.6679 S33: 0.4855 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 6 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -84.8997 -33.5654 109.8931 REMARK 3 T TENSOR REMARK 3 T11: 0.2731 T22: 0.3396 REMARK 3 T33: 0.2453 T12: -0.1765 REMARK 3 T13: -0.0367 T23: 0.0578 REMARK 3 L TENSOR REMARK 3 L11: 6.2200 L22: 3.1724 REMARK 3 L33: 1.9069 L12: 1.5244 REMARK 3 L13: -0.0393 L23: 2.0402 REMARK 3 S TENSOR REMARK 3 S11: -0.1251 S12: 0.3766 S13: 0.1440 REMARK 3 S21: -0.2126 S22: 0.0548 S23: 0.2388 REMARK 3 S31: -0.1432 S32: -0.2102 S33: 0.2180 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 16 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -99.4154 -32.9763 93.5124 REMARK 3 T TENSOR REMARK 3 T11: 0.5732 T22: 1.0970 REMARK 3 T33: 0.7281 T12: -0.0650 REMARK 3 T13: -0.4056 T23: -0.0247 REMARK 3 L TENSOR REMARK 3 L11: 3.6652 L22: 0.5542 REMARK 3 L33: 3.9154 L12: 0.5201 REMARK 3 L13: 3.0558 L23: 0.8543 REMARK 3 S TENSOR REMARK 3 S11: -0.1862 S12: 0.4854 S13: 0.1234 REMARK 3 S21: -0.3507 S22: 0.2517 S23: -0.0978 REMARK 3 S31: -0.0943 S32: 0.4112 S33: -0.0404 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VPE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227770. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58932 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.93100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1FOS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.9 M NA2HPO4 AND 24% (V/V) ETHYLENE REMARK 280 GLYCOL, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.23950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.37750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.23950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.37750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER C 152 REMARK 465 LYS C 219 REMARK 465 VAL D 332 REMARK 465 DC G 1 REMARK 465 DG H 19 REMARK 465 LYS A 219 REMARK 465 VAL B 332 REMARK 465 DC E 1 REMARK 465 DG F 19 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU C 153 CG CD OE1 OE2 REMARK 470 GLU C 154 CG CD OE1 OE2 REMARK 470 LYS C 157 CG CD CE NZ REMARK 470 ARG C 158 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 203 CG CD OE1 OE2 REMARK 470 LYS C 206 CG CD CE NZ REMARK 470 HIS C 218 CG ND1 CD2 CE1 NE2 REMARK 470 GLU D 267 CG CD OE1 OE2 REMARK 470 LEU D 329 CG CD1 CD2 REMARK 470 SER A 152 OG REMARK 470 HIS A 218 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 287 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H22 DG E 2 O2 DC F 18 1.58 REMARK 500 OE2 GLU A 156 HH21 ARG A 159 1.59 REMARK 500 OE1 GLU B 298 O2 EDO B 404 2.12 REMARK 500 NH1 ARG B 288 O HOH B 501 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC G 18 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL D 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO G 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 F 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VPA RELATED DB: PDB REMARK 900 RELATED ID: 5VPB RELATED DB: PDB REMARK 900 RELATED ID: 5VPC RELATED DB: PDB REMARK 900 RELATED ID: 5VPD RELATED DB: PDB REMARK 900 RELATED ID: 5VPF RELATED DB: PDB DBREF 5VPE C 153 219 UNP P53539 FOSB_HUMAN 153 219 DBREF 5VPE D 266 332 UNP P17535 JUND_HUMAN 266 332 DBREF 5VPE G 1 19 PDB 5VPE 5VPE 1 19 DBREF 5VPE H 1 19 PDB 5VPE 5VPE 1 19 DBREF 5VPE A 153 219 UNP P53539 FOSB_HUMAN 153 219 DBREF 5VPE B 266 332 UNP P17535 JUND_HUMAN 266 332 DBREF 5VPE E 1 19 PDB 5VPE 5VPE 1 19 DBREF 5VPE F 1 19 PDB 5VPE 5VPE 1 19 SEQADV 5VPE SER C 152 UNP P53539 EXPRESSION TAG SEQADV 5VPE SER D 265 UNP P17535 EXPRESSION TAG SEQADV 5VPE SER A 152 UNP P53539 EXPRESSION TAG SEQADV 5VPE SER B 265 UNP P17535 EXPRESSION TAG SEQRES 1 C 68 SER GLU GLU GLU GLU LYS ARG ARG VAL ARG ARG GLU ARG SEQRES 2 C 68 ASN LYS LEU ALA ALA ALA LYS CYS ARG ASN ARG ARG ARG SEQRES 3 C 68 GLU LEU THR ASP ARG LEU GLN ALA GLU THR ASP GLN LEU SEQRES 4 C 68 GLU GLU GLU LYS ALA GLU LEU GLU SER GLU ILE ALA GLU SEQRES 5 C 68 LEU GLN LYS GLU LYS GLU ARG LEU GLU PHE VAL LEU VAL SEQRES 6 C 68 ALA HIS LYS SEQRES 1 D 68 SER GLN GLU ARG ILE LYS ALA GLU ARG LYS ARG LEU ARG SEQRES 2 D 68 ASN ARG ILE ALA ALA SER LYS CYS ARG LYS ARG LYS LEU SEQRES 3 D 68 GLU ARG ILE SER ARG LEU GLU GLU LYS VAL LYS THR LEU SEQRES 4 D 68 LYS SER GLN ASN THR GLU LEU ALA SER THR ALA SER LEU SEQRES 5 D 68 LEU ARG GLU GLN VAL ALA GLN LEU LYS GLN LYS VAL LEU SEQRES 6 D 68 SER HIS VAL SEQRES 1 G 19 DC DG DT DC DG DG DT DG DA DC DT DC DA SEQRES 2 G 19 DC DC DG DA DC DG SEQRES 1 H 19 DC DG DT DC DG DG DT DG DA DG DT DC DA SEQRES 2 H 19 DC DC DG DA DC DG SEQRES 1 A 68 SER GLU GLU GLU GLU LYS ARG ARG VAL ARG ARG GLU ARG SEQRES 2 A 68 ASN LYS LEU ALA ALA ALA LYS CYS ARG ASN ARG ARG ARG SEQRES 3 A 68 GLU LEU THR ASP ARG LEU GLN ALA GLU THR ASP GLN LEU SEQRES 4 A 68 GLU GLU GLU LYS ALA GLU LEU GLU SER GLU ILE ALA GLU SEQRES 5 A 68 LEU GLN LYS GLU LYS GLU ARG LEU GLU PHE VAL LEU VAL SEQRES 6 A 68 ALA HIS LYS SEQRES 1 B 68 SER GLN GLU ARG ILE LYS ALA GLU ARG LYS ARG LEU ARG SEQRES 2 B 68 ASN ARG ILE ALA ALA SER LYS CYS ARG LYS ARG LYS LEU SEQRES 3 B 68 GLU ARG ILE SER ARG LEU GLU GLU LYS VAL LYS THR LEU SEQRES 4 B 68 LYS SER GLN ASN THR GLU LEU ALA SER THR ALA SER LEU SEQRES 5 B 68 LEU ARG GLU GLN VAL ALA GLN LEU LYS GLN LYS VAL LEU SEQRES 6 B 68 SER HIS VAL SEQRES 1 E 19 DC DG DT DC DG DG DT DG DA DC DT DC DA SEQRES 2 E 19 DC DC DG DA DC DG SEQRES 1 F 19 DC DG DT DC DG DG DT DG DA DG DT DC DA SEQRES 2 F 19 DC DC DG DA DC DG HET PO4 C 301 5 HET EDO C 302 10 HET NA C 303 1 HET PO4 D 401 5 HET EDO D 402 10 HET EDO D 403 10 HET CL D 404 1 HET EDO G 101 10 HET NA G 102 1 HET EDO A 301 10 HET EDO A 302 10 HET EDO A 303 10 HET EDO B 401 10 HET EDO B 402 10 HET EDO B 403 10 HET EDO B 404 10 HET NA E 101 1 HET PO4 F 101 5 HETNAM PO4 PHOSPHATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 9 PO4 3(O4 P 3-) FORMUL 10 EDO 11(C2 H6 O2) FORMUL 11 NA 3(NA 1+) FORMUL 15 CL CL 1- FORMUL 27 HOH *228(H2 O) HELIX 1 AA1 GLU C 156 HIS C 218 1 63 HELIX 2 AA2 GLN D 266 SER D 330 1 65 HELIX 3 AA3 GLU A 153 HIS A 218 1 66 HELIX 4 AA4 GLN B 266 HIS B 331 1 66 SITE 1 AC1 2 GLU C 155 ARG C 162 SITE 1 AC2 2 GLU C 191 LYS C 194 SITE 1 AC3 8 CYS D 285 ARG D 286 LYS D 289 HOH D 501 SITE 2 AC3 8 HOH D 504 DT H 7 DG H 8 DA H 9 SITE 1 AC4 3 GLN D 266 ARG D 273 DG F 2 SITE 1 AC5 2 ARG D 268 ARG D 275 SITE 1 AC6 1 ARG D 279 SITE 1 AC7 4 DG G 8 DA G 9 DA H 13 DC H 14 SITE 1 AC8 4 GLU A 156 LYS A 157 HOH A 419 ASP C 181 SITE 1 AC9 2 LYS A 194 GLU A 198 SITE 1 AD1 2 GLU A 191 LYS A 194 SITE 1 AD2 1 GLU B 267 SITE 1 AD3 2 SER B 283 DC E 10 SITE 1 AD4 1 SER B 265 SITE 1 AD5 4 GLU B 297 GLU B 298 LYS B 301 HOH B 518 SITE 1 AD6 6 ARG B 286 LYS B 289 DT F 7 DG F 8 SITE 2 AD6 6 DA F 9 HOH F 206 CRYST1 116.479 90.755 105.618 90.00 117.93 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008585 0.000000 0.004552 0.00000 SCALE2 0.000000 0.011019 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010717 0.00000