HEADER PROTEIN BINDING 08-MAY-17 5VQA TITLE STRUCTURE OF HUMAN TRIP13, ATP-BOUND FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PACHYTENE CHECKPOINT PROTEIN 2 HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HUMAN PAPILLOMAVIRUS TYPE 16 E1 PROTEIN-BINDING PROTEIN, COMPND 5 HPV16 E1 PROTEIN-BINDING PROTEIN,THYROID HORMONE RECEPTOR INTERACTOR COMPND 6 13,THYROID RECEPTOR-INTERACTING PROTEIN 13,TRIP-13; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRIP13, PCH2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AAA+ ATPASE, MEIOSIS, SPINDLE ASSEMBLY CHECKPOINT, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR Q.YE,K.D.CORBETT REVDAT 4 04-OCT-23 5VQA 1 REMARK REVDAT 3 30-AUG-17 5VQA 1 JRNL REVDAT 2 12-JUL-17 5VQA 1 JRNL REVDAT 1 14-JUN-17 5VQA 0 JRNL AUTH Q.YE,D.H.KIM,I.DERELI,S.C.ROSENBERG,G.HAGEMANN,F.HERZOG, JRNL AUTH 2 A.TOTH,D.W.CLEVELAND,K.D.CORBETT JRNL TITL THE AAA+ ATPASE TRIP13 REMODELS HORMA DOMAINS THROUGH JRNL TITL 2 N-TERMINAL ENGAGEMENT AND UNFOLDING. JRNL REF EMBO J. V. 36 2419 2017 JRNL REFN ESSN 1460-2075 JRNL PMID 28659378 JRNL DOI 10.15252/EMBJ.201797291 REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 1156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3489 - 5.2018 0.99 2464 119 0.1891 0.2123 REMARK 3 2 5.2018 - 4.1295 1.00 2430 120 0.1581 0.1758 REMARK 3 3 4.1295 - 3.6077 1.00 2427 141 0.1742 0.2389 REMARK 3 4 3.6077 - 3.2779 1.00 2431 128 0.1946 0.2635 REMARK 3 5 3.2779 - 3.0430 1.00 2390 158 0.2159 0.2755 REMARK 3 6 3.0430 - 2.8636 1.00 2408 134 0.2389 0.2931 REMARK 3 7 2.8636 - 2.7202 1.00 2420 128 0.2680 0.3115 REMARK 3 8 2.7202 - 2.6018 1.00 2388 141 0.3074 0.3906 REMARK 3 9 2.6018 - 2.5400 1.00 2442 124 0.3409 0.3659 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2992 REMARK 3 ANGLE : 0.986 4058 REMARK 3 CHIRALITY : 0.052 489 REMARK 3 PLANARITY : 0.005 501 REMARK 3 DIHEDRAL : 13.688 1816 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESI 1:107 REMARK 3 ORIGIN FOR THE GROUP (A): 51.5398 10.9242 0.5303 REMARK 3 T TENSOR REMARK 3 T11: 0.5719 T22: 0.9070 REMARK 3 T33: 0.5946 T12: -0.1264 REMARK 3 T13: 0.0626 T23: -0.0823 REMARK 3 L TENSOR REMARK 3 L11: 4.2572 L22: 5.6172 REMARK 3 L33: 7.4899 L12: 0.8139 REMARK 3 L13: -1.2724 L23: -0.4163 REMARK 3 S TENSOR REMARK 3 S11: 0.4278 S12: -0.5991 S13: -0.0257 REMARK 3 S21: 0.1001 S22: -0.0867 S23: -0.7977 REMARK 3 S31: -0.5145 S32: 1.3369 S33: -0.3184 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESI 108:322 REMARK 3 ORIGIN FOR THE GROUP (A): 27.0532 -0.6702 9.5109 REMARK 3 T TENSOR REMARK 3 T11: 0.4431 T22: 0.4964 REMARK 3 T33: 0.4416 T12: -0.1185 REMARK 3 T13: -0.0412 T23: 0.0534 REMARK 3 L TENSOR REMARK 3 L11: 1.9242 L22: 5.5408 REMARK 3 L33: 3.6376 L12: -0.7544 REMARK 3 L13: -0.1831 L23: -0.5616 REMARK 3 S TENSOR REMARK 3 S11: 0.0506 S12: 0.0375 S13: -0.3154 REMARK 3 S21: -0.1193 S22: 0.0188 S23: 0.6801 REMARK 3 S31: 0.5275 S32: -0.5728 S33: -0.0202 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESI 323:431 REMARK 3 ORIGIN FOR THE GROUP (A): 30.1742 32.7878 12.9470 REMARK 3 T TENSOR REMARK 3 T11: 0.3984 T22: 0.3976 REMARK 3 T33: 0.4365 T12: 0.0867 REMARK 3 T13: -0.0048 T23: -0.0517 REMARK 3 L TENSOR REMARK 3 L11: 3.8635 L22: 6.7322 REMARK 3 L33: 6.8584 L12: 1.2002 REMARK 3 L13: -0.3979 L23: 1.1508 REMARK 3 S TENSOR REMARK 3 S11: -0.0151 S12: -0.0973 S13: 0.3818 REMARK 3 S21: 0.2528 S22: 0.0307 S23: 0.1130 REMARK 3 S31: -0.2607 S32: -0.1407 S33: -0.0391 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VQA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227854. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22993 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.540 REMARK 200 RESOLUTION RANGE LOW (A) : 121.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 1.76700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XGU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL PH 8.5, 0.2 M KCL, 10% REMARK 280 PENTAERYTHRITOL PROPOXYLATE, 5 MM MGCL2, 1 MM ATP, CRYOPROTECTED REMARK 280 WITH 10% GLYCEROL AND 12% ADDITIONAL PENTAERYTHRITOL PROPOXYLATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.65267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.32633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.48950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.16317 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 100.81583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE HOMOHEXAMER CAN'T BE ASSEMBLED FROM CRYSTAL PACKING, AS REMARK 300 THE CRYSTALS FORM A HELICAL FILAMENT AND THE HOMOHEXAMER FORMS A REMARK 300 CLOSED HEXAMERIC RING. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 GLU A 3 REMARK 465 ALA A 4 REMARK 465 VAL A 5 REMARK 465 GLY A 6 REMARK 465 ASP A 7 REMARK 465 LEU A 8 REMARK 465 LYS A 9 REMARK 465 GLN A 10 REMARK 465 ALA A 11 REMARK 465 LEU A 12 REMARK 465 PRO A 13 REMARK 465 CYS A 14 REMARK 465 VAL A 15 REMARK 465 ALA A 16 REMARK 465 GLU A 17 REMARK 465 SER A 18 REMARK 465 VAL A 52 REMARK 465 PHE A 53 REMARK 465 THR A 78 REMARK 465 GLU A 79 REMARK 465 LEU A 80 REMARK 465 LYS A 81 REMARK 465 VAL A 82 REMARK 465 LYS A 83 REMARK 465 ASP A 84 REMARK 465 SER A 85 REMARK 465 GLN A 86 REMARK 465 PRO A 87 REMARK 465 ILE A 88 REMARK 465 SER A 108 REMARK 465 SER A 109 REMARK 465 GLU A 110 REMARK 465 ASN A 111 REMARK 465 LEU A 112 REMARK 465 GLU A 113 REMARK 465 GLU A 114 REMARK 465 GLU A 115 REMARK 465 THR A 116 REMARK 465 GLU A 117 REMARK 465 ASN A 118 REMARK 465 LEU A 217 REMARK 465 PHE A 218 REMARK 465 SER A 219 REMARK 465 LYS A 220 REMARK 465 TRP A 221 REMARK 465 PHE A 222 REMARK 465 SER A 223 REMARK 465 GLU A 224 REMARK 465 SER A 225 REMARK 465 GLY A 226 REMARK 465 ASN A 262 REMARK 465 ALA A 263 REMARK 465 CYS A 264 REMARK 465 ARG A 265 REMARK 465 ALA A 266 REMARK 465 GLY A 267 REMARK 465 THR A 268 REMARK 465 GLU A 269 REMARK 465 PRO A 270 REMARK 465 SER A 271 REMARK 465 TYR A 431 REMARK 465 ILE A 432 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 55 CG OD1 OD2 REMARK 470 PHE A 309 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL A 310 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 636 O HOH A 664 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 91 -79.78 -121.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 709 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A 710 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH A 711 DISTANCE = 7.42 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VQ9 RELATED DB: PDB DBREF 5VQA A 1 432 UNP Q15645 PCH2_HUMAN 1 432 SEQADV 5VQA GLN A 253 UNP Q15645 GLU 253 ENGINEERED MUTATION SEQRES 1 A 432 MET ASP GLU ALA VAL GLY ASP LEU LYS GLN ALA LEU PRO SEQRES 2 A 432 CYS VAL ALA GLU SER PRO THR VAL HIS VAL GLU VAL HIS SEQRES 3 A 432 GLN ARG GLY SER SER THR ALA LYS LYS GLU ASP ILE ASN SEQRES 4 A 432 LEU SER VAL ARG LYS LEU LEU ASN ARG HIS ASN ILE VAL SEQRES 5 A 432 PHE GLY ASP TYR THR TRP THR GLU PHE ASP GLU PRO PHE SEQRES 6 A 432 LEU THR ARG ASN VAL GLN SER VAL SER ILE ILE ASP THR SEQRES 7 A 432 GLU LEU LYS VAL LYS ASP SER GLN PRO ILE ASP LEU SER SEQRES 8 A 432 ALA CYS THR VAL ALA LEU HIS ILE PHE GLN LEU ASN GLU SEQRES 9 A 432 ASP GLY PRO SER SER GLU ASN LEU GLU GLU GLU THR GLU SEQRES 10 A 432 ASN ILE ILE ALA ALA ASN HIS TRP VAL LEU PRO ALA ALA SEQRES 11 A 432 GLU PHE HIS GLY LEU TRP ASP SER LEU VAL TYR ASP VAL SEQRES 12 A 432 GLU VAL LYS SER HIS LEU LEU ASP TYR VAL MET THR THR SEQRES 13 A 432 LEU LEU PHE SER ASP LYS ASN VAL ASN SER ASN LEU ILE SEQRES 14 A 432 THR TRP ASN ARG VAL VAL LEU LEU HIS GLY PRO PRO GLY SEQRES 15 A 432 THR GLY LYS THR SER LEU CYS LYS ALA LEU ALA GLN LYS SEQRES 16 A 432 LEU THR ILE ARG LEU SER SER ARG TYR ARG TYR GLY GLN SEQRES 17 A 432 LEU ILE GLU ILE ASN SER HIS SER LEU PHE SER LYS TRP SEQRES 18 A 432 PHE SER GLU SER GLY LYS LEU VAL THR LYS MET PHE GLN SEQRES 19 A 432 LYS ILE GLN ASP LEU ILE ASP ASP LYS ASP ALA LEU VAL SEQRES 20 A 432 PHE VAL LEU ILE ASP GLN VAL GLU SER LEU THR ALA ALA SEQRES 21 A 432 ARG ASN ALA CYS ARG ALA GLY THR GLU PRO SER ASP ALA SEQRES 22 A 432 ILE ARG VAL VAL ASN ALA VAL LEU THR GLN ILE ASP GLN SEQRES 23 A 432 ILE LYS ARG HIS SER ASN VAL VAL ILE LEU THR THR SER SEQRES 24 A 432 ASN ILE THR GLU LYS ILE ASP VAL ALA PHE VAL ASP ARG SEQRES 25 A 432 ALA ASP ILE LYS GLN TYR ILE GLY PRO PRO SER ALA ALA SEQRES 26 A 432 ALA ILE PHE LYS ILE TYR LEU SER CYS LEU GLU GLU LEU SEQRES 27 A 432 MET LYS CYS GLN ILE ILE TYR PRO ARG GLN GLN LEU LEU SEQRES 28 A 432 THR LEU ARG GLU LEU GLU MET ILE GLY PHE ILE GLU ASN SEQRES 29 A 432 ASN VAL SER LYS LEU SER LEU LEU LEU ASN ASP ILE SER SEQRES 30 A 432 ARG LYS SER GLU GLY LEU SER GLY ARG VAL LEU ARG LYS SEQRES 31 A 432 LEU PRO PHE LEU ALA HIS ALA LEU TYR VAL GLN ALA PRO SEQRES 32 A 432 THR VAL THR ILE GLU GLY PHE LEU GLN ALA LEU SER LEU SEQRES 33 A 432 ALA VAL ASP LYS GLN PHE GLU GLU ARG LYS LYS LEU ALA SEQRES 34 A 432 ALA TYR ILE HET ATP A 501 31 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 2 ATP C10 H16 N5 O13 P3 FORMUL 3 HOH *111(H2 O) HELIX 1 AA1 LYS A 34 ASN A 50 1 17 HELIX 2 AA2 GLU A 63 ASN A 69 1 7 HELIX 3 AA3 ALA A 129 HIS A 133 5 5 HELIX 4 AA4 GLY A 134 LEU A 139 1 6 HELIX 5 AA5 GLU A 144 ASN A 163 1 20 HELIX 6 AA6 GLY A 184 LEU A 200 1 17 HELIX 7 AA7 LEU A 228 ASP A 241 1 14 HELIX 8 AA8 VAL A 254 ALA A 260 1 7 HELIX 9 AA9 ALA A 273 LYS A 288 1 16 HELIX 10 AB1 SER A 323 CYS A 341 1 19 HELIX 11 AB2 THR A 352 ILE A 359 1 8 HELIX 12 AB3 SER A 367 SER A 380 1 14 HELIX 13 AB4 SER A 384 VAL A 400 1 17 HELIX 14 AB5 THR A 406 ALA A 430 1 25 SHEET 1 AA1 4 THR A 57 TRP A 58 0 SHEET 2 AA1 4 VAL A 70 ILE A 76 -1 O VAL A 73 N TRP A 58 SHEET 3 AA1 4 VAL A 21 GLN A 27 -1 N HIS A 26 O GLN A 71 SHEET 4 AA1 4 VAL A 95 PHE A 100 1 O HIS A 98 N VAL A 25 SHEET 1 AA2 6 ALA A 122 LEU A 127 0 SHEET 2 AA2 6 TYR A 206 ILE A 212 -1 O GLU A 211 N ASN A 123 SHEET 3 AA2 6 ALA A 245 ILE A 251 1 O PHE A 248 N GLN A 208 SHEET 4 AA2 6 VAL A 293 SER A 299 1 O LEU A 296 N VAL A 249 SHEET 5 AA2 6 VAL A 174 HIS A 178 1 N LEU A 177 O THR A 297 SHEET 6 AA2 6 ILE A 315 TYR A 318 1 O ILE A 315 N LEU A 176 CISPEP 1 ILE A 120 ALA A 121 0 15.07 CISPEP 2 LEU A 127 PRO A 128 0 1.18 CISPEP 3 VAL A 307 ALA A 308 0 -3.46 CISPEP 4 TYR A 345 PRO A 346 0 -1.78 SITE 1 AC1 19 SER A 138 LEU A 139 VAL A 140 TYR A 141 SITE 2 AC1 19 GLY A 182 THR A 183 GLY A 184 LYS A 185 SITE 3 AC1 19 THR A 186 SER A 187 ASP A 252 GLN A 253 SITE 4 AC1 19 THR A 298 ASN A 300 ILE A 330 GLY A 385 SITE 5 AC1 19 ARG A 386 ARG A 389 HOH A 608 CRYST1 98.479 98.479 120.979 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010154 0.005863 0.000000 0.00000 SCALE2 0.000000 0.011725 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008266 0.00000