HEADER TRANSPORT PROTEIN 17-MAY-17 5VTM TITLE THE CRYSTAL STRUCTURE OF MINOR PSEUDOPILIN TERNARY COMPLEX OF XCPVWX TITLE 2 FROM THE TYPE 2 SECRETION SYSTEM OF PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE II SECRETION SYSTEM PROTEIN J; COMPND 3 CHAIN: W; COMPND 4 FRAGMENT: RESIDUES 44-237; COMPND 5 SYNONYM: T2SS PROTEIN J,GENERAL SECRETION PATHWAY PROTEIN J,PILD- COMPND 6 DEPENDENT PROTEIN PDDD; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TYPE II SECRETION SYSTEM PROTEIN K; COMPND 10 CHAIN: X; COMPND 11 FRAGMENT: RESIDUES 44-316; COMPND 12 SYNONYM: T2SS PROTEIN K,GENERAL SECRETION PATHWAY PROTEIN K; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: TYPE II SECRETION SYSTEM PROTEIN I; COMPND 16 CHAIN: V; COMPND 17 FRAGMENT: RESIDUES 38-129; COMPND 18 SYNONYM: T2SS PROTEIN I,GENERAL SECRETION PATHWAY PROTEIN I,PILD- COMPND 19 DEPENDENT PROTEIN PDDC; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 6 / 1C / PRS 101 / PAO1; SOURCE 7 GENE: XCPW, PDDD, PA3098; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 12 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 13 ORGANISM_TAXID: 208964; SOURCE 14 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 15 / 1C / PRS 101 / PAO1; SOURCE 16 GENE: XCPX, PA3097; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 21 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 22 ORGANISM_TAXID: 208964; SOURCE 23 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 24 / 1C / PRS 101 / PAO1; SOURCE 25 GENE: XCPV, PDDC, PA3099; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TYPE 2 SECRETION SYSTEM, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.ZHANG,Z.JIA REVDAT 5 15-NOV-23 5VTM 1 REMARK REVDAT 4 04-OCT-23 5VTM 1 LINK REVDAT 3 06-NOV-19 5VTM 1 REMARK REVDAT 2 07-NOV-18 5VTM 1 JRNL REVDAT 1 23-MAY-18 5VTM 0 JRNL AUTH Y.ZHANG,F.FAUCHER,W.ZHANG,S.WANG,N.NEVILLE,K.POOLE,J.ZHENG, JRNL AUTH 2 Z.JIA JRNL TITL STRUCTURE-GUIDED DISRUPTION OF THE PSEUDOPILUS TIP COMPLEX JRNL TITL 2 INHIBITS THE TYPE II SECRETION IN PSEUDOMONAS AERUGINOSA. JRNL REF PLOS PATHOG. V. 14 07343 2018 JRNL REFN ESSN 1553-7374 JRNL PMID 30346996 JRNL DOI 10.1371/JOURNAL.PPAT.1007343 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.320 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.5198 - 4.9173 1.00 2270 154 0.2001 0.2410 REMARK 3 2 4.9173 - 3.9038 0.98 2143 144 0.1714 0.2105 REMARK 3 3 3.9038 - 3.4106 1.00 2132 144 0.1803 0.2411 REMARK 3 4 3.4106 - 3.0988 1.00 2133 143 0.1848 0.2382 REMARK 3 5 3.0988 - 2.8768 1.00 2133 145 0.1922 0.2541 REMARK 3 6 2.8768 - 2.7072 1.00 2088 141 0.2133 0.2784 REMARK 3 7 2.7072 - 2.5716 1.00 2094 142 0.2054 0.2764 REMARK 3 8 2.5716 - 2.4597 1.00 2093 140 0.2062 0.2636 REMARK 3 9 2.4597 - 2.3650 1.00 2111 143 0.1905 0.2695 REMARK 3 10 2.3650 - 2.2834 1.00 2088 141 0.2018 0.2655 REMARK 3 11 2.2834 - 2.2120 1.00 2098 142 0.1957 0.2521 REMARK 3 12 2.2120 - 2.1488 1.00 2080 140 0.1897 0.2781 REMARK 3 13 2.1488 - 2.0922 1.00 2073 140 0.1940 0.2769 REMARK 3 14 2.0922 - 2.0412 1.00 2089 141 0.1903 0.2623 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4120 REMARK 3 ANGLE : 0.915 5553 REMARK 3 CHIRALITY : 0.052 590 REMARK 3 PLANARITY : 0.005 736 REMARK 3 DIHEDRAL : 9.292 2506 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VTM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227890. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0-9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31625 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 43.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5BW0, 3CI0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 19 %-22 % PEG 2000 MME, 0.1M TRIS, PH REMARK 280 8.0-9.0, 0.2 M TRIMETHYLAMINE N-OXIDE, PH 8.5, EVAPORATION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.77300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.43050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.38000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.43050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.77300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.38000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: W, X, V REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP W 87 REMARK 465 GLN W 206 REMARK 465 ASP W 207 REMARK 465 GLN W 208 REMARK 465 PRO W 209 REMARK 465 GLN W 210 REMARK 465 GLY W 211 REMARK 465 GLN W 212 REMARK 465 PRO W 213 REMARK 465 GLY W 214 REMARK 465 GLY W 215 REMARK 465 GLU W 216 REMARK 465 ASN W 217 REMARK 465 GLY W 218 REMARK 465 GLU W 219 REMARK 465 ASN W 220 REMARK 465 GLY W 221 REMARK 465 GLU W 222 REMARK 465 GLY W 223 REMARK 465 GLY W 224 REMARK 465 VAL W 225 REMARK 465 PRO W 226 REMARK 465 GLN W 227 REMARK 465 PRO W 228 REMARK 465 PRO W 229 REMARK 465 GLU W 230 REMARK 465 GLY W 231 REMARK 465 MET W 232 REMARK 465 PRO W 233 REMARK 465 GLY W 234 REMARK 465 ALA W 235 REMARK 465 PRO W 236 REMARK 465 GLU W 237 REMARK 465 ARG X 67 REMARK 465 GLN X 68 REMARK 465 GLY X 69 REMARK 465 GLY X 70 REMARK 465 GLU X 71 REMARK 465 ASN X 72 REMARK 465 THR X 73 REMARK 465 ARG X 74 REMARK 465 GLU X 75 REMARK 465 ASP X 95 REMARK 465 LEU X 263 REMARK 465 GLY X 264 REMARK 465 SER X 265 REMARK 465 THR X 267 REMARK 465 THR V 89 REMARK 465 ALA V 90 REMARK 465 GLU V 91 REMARK 465 GLN V 92 REMARK 465 SER V 127 REMARK 465 GLN V 128 REMARK 465 PRO V 129 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN W 86 CG OD1 ND2 REMARK 470 GLU W 186 CG REMARK 470 ASP X 94 CG OD1 OD2 REMARK 470 ARG X 117 CG CD NE CZ NH1 NH2 REMARK 470 ASP X 214 CG OD1 OD2 REMARK 470 MET X 313 CG SD CE REMARK 470 GLU V 56 CD REMARK 470 LYS V 104 CG CD CE NZ REMARK 470 GLU V 115 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG X 45 O HOH X 501 1.83 REMARK 500 O HOH W 322 O HOH W 385 1.84 REMARK 500 O HOH W 405 O HOH X 643 1.85 REMARK 500 N ARG V 110 O HOH V 201 1.90 REMARK 500 O HOH W 331 O HOH V 218 1.98 REMARK 500 OE2 GLU X 284 O HOH X 502 2.00 REMARK 500 NE ARG W 52 O HOH W 301 2.01 REMARK 500 NH2 ARG W 107 OD2 ASP X 312 2.02 REMARK 500 O HOH X 511 O HOH X 648 2.04 REMARK 500 O THR X 261 O HOH X 503 2.04 REMARK 500 O HOH W 398 O HOH W 405 2.05 REMARK 500 OE1 GLU W 172 O HOH W 302 2.05 REMARK 500 OE1 GLU W 66 O HOH W 303 2.06 REMARK 500 O HOH W 399 O HOH W 407 2.07 REMARK 500 NZ LYS X 122 O HOH X 504 2.13 REMARK 500 O LYS V 104 O HOH V 202 2.15 REMARK 500 O HOH X 503 O HOH X 516 2.17 REMARK 500 OE1 GLU X 198 O HOH X 505 2.18 REMARK 500 NH1 ARG W 173 O HOH W 304 2.19 REMARK 500 NZ LYS X 266 O HOH X 506 2.19 REMARK 500 O ASP X 94 O HOH X 507 2.19 REMARK 500 OE2 GLU W 85 O HOH W 305 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU W 199 -134.94 -107.70 REMARK 500 ARG X 119 -15.55 77.65 REMARK 500 GLU X 167 -146.88 -124.22 REMARK 500 LEU X 194 40.86 -86.23 REMARK 500 GLU X 213 -53.79 -26.39 REMARK 500 GLU V 41 -70.63 -63.00 REMARK 500 ALA V 102 -63.69 -108.87 REMARK 500 ALA V 103 137.36 106.76 REMARK 500 ARG V 108 12.40 93.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP X 65 OD1 REMARK 620 2 ASP X 65 OD2 51.0 REMARK 620 3 VAL X 77 O 160.1 146.6 REMARK 620 4 ASP X 78 OD1 119.3 76.9 80.0 REMARK 620 5 GLU X 82 OE1 80.7 113.8 92.8 97.5 REMARK 620 6 GLU X 82 OE2 73.6 124.4 87.4 147.6 53.1 REMARK 620 7 HOH X 554 O 89.5 82.2 85.8 114.5 147.1 94.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP X 152 OD1 REMARK 620 2 ASP X 155 OD1 102.3 REMARK 620 3 ASP X 155 OD2 89.7 51.0 REMARK 620 4 ASP X 157 OD1 168.8 87.7 100.6 REMARK 620 5 ASN X 159 O 88.0 154.6 153.6 80.8 REMARK 620 6 GLU X 167 OE2 85.6 70.5 118.6 93.1 87.5 REMARK 620 7 HOH X 638 O 95.8 122.5 75.4 82.8 78.7 166.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP X 152 O REMARK 620 2 ASP X 155 O 93.9 REMARK 620 3 ASP X 155 OD1 83.3 71.3 REMARK 620 4 ASP X 157 O 176.2 88.6 94.8 REMARK 620 5 GLU X 167 OE1 89.2 161.3 127.4 89.3 REMARK 620 6 GLU X 167 OE2 93.2 145.6 76.1 83.2 52.4 REMARK 620 7 ASN X 182 OD1 98.0 82.4 153.8 85.1 78.8 129.7 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA X 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA X 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA X 403 DBREF 5VTM W 44 237 UNP Q00517 GSPJ_PSEAE 44 237 DBREF 5VTM X 44 316 UNP Q00518 GSPK_PSEAE 44 316 DBREF 5VTM V 38 129 UNP Q00516 GSPI_PSEAE 38 129 SEQRES 1 W 194 GLU GLN ARG MET ARG GLU LEU VAL ARG ALA MET GLY ALA SEQRES 2 W 194 LEU GLU ARG ASP LEU THR GLN ALA VAL GLU ARG PRO VAL SEQRES 3 W 194 ARG ASP GLU LEU GLY ASP ASN ARG GLY ALA PHE LEU SER SEQRES 4 W 194 GLU GLY GLU ASN ASP GLN ILE VAL GLU PHE THR ARG GLY SEQRES 5 W 194 GLY TRP ARG ASN PRO LEU GLY GLN ALA ARG SER ARG LEU SEQRES 6 W 194 GLN ARG VAL ARG TRP SER LEU SER GLY GLU THR LEU GLU SEQRES 7 W 194 ARG ARG TYR TRP LEU VAL LEU ASP ARG ALA GLN ASP SER SEQRES 8 W 194 LYS PRO ARG VAL GLN GLN VAL LEU ASP GLY VAL THR ALA SEQRES 9 W 194 LEU SER TRP ARG PHE LEU ASP LYS GLU HIS ASN TRP GLN SEQRES 10 W 194 GLY HIS TRP PRO THR ASP GLU GLY SER GLU GLU GLU ARG SEQRES 11 W 194 LEU GLU SER LEU PRO LEU ALA VAL GLU MET THR LEU GLU SEQRES 12 W 194 HIS ARG HIS TYR GLY LYS LEU VAL ARG VAL TRP ARG LEU SEQRES 13 W 194 LEU ASP PRO PRO LEU LYS GLN ASP GLN PRO GLN GLY GLN SEQRES 14 W 194 PRO GLY GLY GLU ASN GLY GLU ASN GLY GLU GLY GLY VAL SEQRES 15 W 194 PRO GLN PRO PRO GLU GLY MET PRO GLY ALA PRO GLU SEQRES 1 X 273 VAL ARG GLN ALA TRP HIS TYR ALA LEU GLY GLY GLU ARG SEQRES 2 X 273 LEU ALA GLU ALA VAL LEU ARG ARG ASP LEU ARG GLN GLY SEQRES 3 X 273 GLY GLU ASN THR ARG GLU PRO VAL ASP HIS LEU GLY GLU SEQRES 4 X 273 ALA TRP ALA ARG PRO MET THR PRO PHE LYS LEU ASP ASP SEQRES 5 X 273 GLY GLY GLU LEU ARG VAL ARG ILE GLU ASP PRO SER GLY SEQRES 6 X 273 ARG PHE ASN LEU ASN GLY LEU VAL ARG LYS ARG LYS VAL SEQRES 7 X 273 LYS PRO ASP SER VAL LYS GLN PHE ARG ARG LEU LEU ALA SEQRES 8 X 273 THR LEU GLY MET LYS GLU GLU ILE VAL GLN GLY LEU PRO SEQRES 9 X 273 ASP ARG LEU ALA ASP TRP LEU ASP ALA ASP GLN ASN PRO SEQRES 10 X 273 GLN GLY GLU GLN GLY ALA GLU ASP ASN GLN TYR LEU LEU SEQRES 11 X 273 GLU ALA PRO ALA TYR ARG ALA ALA ASN ARG SER PHE LYS SEQRES 12 X 273 ASP VAL SER GLU LEU ARG LEU LEU LYS LEU SER GLU ALA SEQRES 13 X 273 ASP TYR ARG ARG LEU LEU PRO PHE VAL SER ALA LEU PRO SEQRES 14 X 273 GLU ASP ALA PRO LEU ASN VAL ASN THR ALA SER VAL PRO SEQRES 15 X 273 VAL LEU ALA ALA MSE PHE GLU ILE ASP PRO GLY GLN ALA SEQRES 16 X 273 GLU ASN ILE VAL ASP ALA ARG GLY ARG GLU GLY PHE GLN SEQRES 17 X 273 SER LYS ASP ASP PHE THR LYS HIS LEU THR GLN LEU GLY SEQRES 18 X 273 SER LYS THR GLY ASN VAL SER TYR ALA VAL GLY THR ARG SEQRES 19 X 273 TYR PHE GLN VAL ILE SER GLU VAL SER LEU GLY ASP ARG SEQRES 20 X 273 ARG GLN VAL LEU VAL SER THR LEU GLN ARG GLY LYS ASP SEQRES 21 X 273 GLY LYS ILE ARG VAL MET ALA ARG ASP MET GLY GLN GLY SEQRES 1 V 92 SER ARG LEU GLU ASP LYS THR LEU ALA MET TRP ILE ALA SEQRES 2 V 92 ASP ASN ARG LEU ASN GLU LEU GLN LEU GLU GLN THR PRO SEQRES 3 V 92 PRO SER SER GLY ARG ASN GLN GLY GLU LEU GLU PHE ALA SEQRES 4 V 92 GLY ARG ARG TRP GLU TRP ARG THR GLN VAL ASP SER THR SEQRES 5 V 92 ALA GLU GLN ASP MET ARG ARG VAL ILE VAL TRP VAL ALA SEQRES 6 V 92 ALA LYS PRO LEU GLY ARG GLU ARG GLY SER ILE GLU GLU SEQRES 7 V 92 ARG ALA ALA ALA ARG LEU VAL GLY PHE LEU GLY SER GLN SEQRES 8 V 92 PRO MODRES 5VTM MSE X 230 MET MODIFIED RESIDUE HET MSE X 230 8 HET CA X 401 1 HET CA X 402 1 HET CA X 403 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 2 MSE C5 H11 N O2 SE FORMUL 4 CA 3(CA 2+) FORMUL 7 HOH *288(H2 O) HELIX 1 AA1 GLU W 44 GLN W 63 1 20 HELIX 2 AA2 SER W 169 SER W 176 1 8 HELIX 3 AA3 ARG X 45 LEU X 66 1 22 HELIX 4 AA4 GLU X 82 ARG X 86 5 5 HELIX 5 AA5 ASP X 105 ARG X 109 5 5 HELIX 6 AA6 LYS X 122 LEU X 136 1 15 HELIX 7 AA7 LYS X 139 ASP X 155 1 17 HELIX 8 AA8 GLN X 161 GLY X 165 5 5 HELIX 9 AA9 GLU X 167 LEU X 172 1 6 HELIX 10 AB1 ASP X 187 LEU X 194 5 8 HELIX 11 AB2 SER X 197 LEU X 205 1 9 HELIX 12 AB3 SER X 223 PHE X 231 1 9 HELIX 13 AB4 ASP X 234 GLY X 246 1 13 HELIX 14 AB5 SER X 252 GLN X 262 1 11 HELIX 15 AB6 ARG V 39 GLU V 60 1 22 SHEET 1 AA1 2 VAL W 69 ARG W 70 0 SHEET 2 AA1 2 ASN W 76 ARG W 77 -1 O ARG W 77 N VAL W 69 SHEET 1 AA2 5 PHE W 80 GLU W 83 0 SHEET 2 AA2 5 ILE W 89 ARG W 94 -1 O ILE W 89 N GLU W 83 SHEET 3 AA2 5 GLN W 109 SER W 116 -1 O TRP W 113 N VAL W 90 SHEET 4 AA2 5 THR W 119 TYR W 124 -1 O GLU W 121 N SER W 114 SHEET 5 AA2 5 ARG W 137 LEU W 142 -1 O LEU W 142 N LEU W 120 SHEET 1 AA3 4 TRP W 159 GLN W 160 0 SHEET 2 AA3 4 VAL W 145 LEU W 153 -1 N PHE W 152 O GLN W 160 SHEET 3 AA3 4 ALA W 180 HIS W 187 -1 O GLU W 186 N ALA W 147 SHEET 4 AA3 4 GLY W 191 ARG W 198 -1 O LEU W 193 N LEU W 185 SHEET 1 AA4 5 PHE X 91 LYS X 92 0 SHEET 2 AA4 5 GLU X 98 GLU X 104 -1 O LEU X 99 N PHE X 91 SHEET 3 AA4 5 TYR X 278 LEU X 287 -1 O GLU X 284 N ARG X 100 SHEET 4 AA4 5 ARG X 290 ARG X 300 -1 O LEU X 294 N SER X 283 SHEET 5 AA4 5 ILE X 306 ASP X 312 -1 O MET X 309 N THR X 297 SHEET 1 AA5 2 PHE X 110 ASN X 111 0 SHEET 2 AA5 2 VAL X 208 SER X 209 1 O SER X 209 N PHE X 110 SHEET 1 AA6 2 VAL X 116 ARG X 117 0 SHEET 2 AA6 2 LYS X 120 VAL X 121 -1 O LYS X 120 N ARG X 117 SHEET 1 AA7 2 LEU X 217 ASN X 218 0 SHEET 2 AA7 2 TYR X 272 ALA X 273 1 O ALA X 273 N LEU X 217 SHEET 1 AA8 4 GLY V 67 PHE V 75 0 SHEET 2 AA8 4 ARG V 78 ASP V 87 -1 O TRP V 80 N LEU V 73 SHEET 3 AA8 4 ARG V 95 VAL V 101 -1 O TRP V 100 N ARG V 83 SHEET 4 AA8 4 ALA V 119 LEU V 125 -1 O LEU V 125 N ARG V 95 LINK C ALA X 229 N MSE X 230 1555 1555 1.33 LINK C MSE X 230 N PHE X 231 1555 1555 1.33 LINK OD1 ASP X 65 CA CA X 401 1555 1555 2.55 LINK OD2 ASP X 65 CA CA X 401 1555 1555 2.55 LINK O VAL X 77 CA CA X 401 1555 1555 2.22 LINK OD1 ASP X 78 CA CA X 401 1555 1555 2.43 LINK OE1 GLU X 82 CA CA X 401 1555 1555 2.45 LINK OE2 GLU X 82 CA CA X 401 1555 1555 2.47 LINK OD1 ASP X 152 CA CA X 402 1555 1555 2.36 LINK O ASP X 152 CA CA X 403 1555 1555 2.31 LINK OD1 ASP X 155 CA CA X 402 1555 1555 2.67 LINK OD2 ASP X 155 CA CA X 402 1555 1555 2.37 LINK O ASP X 155 CA CA X 403 1555 1555 2.46 LINK OD1 ASP X 155 CA CA X 403 1555 1555 2.23 LINK OD1 ASP X 157 CA CA X 402 1555 1555 2.41 LINK O ASP X 157 CA CA X 403 1555 1555 2.39 LINK O ASN X 159 CA CA X 402 1555 1555 2.37 LINK OE2 GLU X 167 CA CA X 402 1555 1555 2.34 LINK OE1 GLU X 167 CA CA X 403 1555 1555 2.49 LINK OE2 GLU X 167 CA CA X 403 1555 1555 2.47 LINK OD1 ASN X 182 CA CA X 403 1555 1555 2.36 LINK CA CA X 401 O HOH X 554 1555 1555 2.29 LINK CA CA X 402 O HOH X 638 1555 1555 2.74 CISPEP 1 TRP W 163 PRO W 164 0 0.89 CISPEP 2 ALA X 175 PRO X 176 0 -3.21 SITE 1 AC1 5 ASP X 65 VAL X 77 ASP X 78 GLU X 82 SITE 2 AC1 5 HOH X 554 SITE 1 AC2 6 ASP X 152 ASP X 155 ASP X 157 ASN X 159 SITE 2 AC2 6 GLU X 167 HOH X 638 SITE 1 AC3 5 ASP X 152 ASP X 155 ASP X 157 GLU X 167 SITE 2 AC3 5 ASN X 182 CRYST1 61.546 76.760 102.861 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016248 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013028 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009722 0.00000