HEADER OXIDOREDUCTASE 18-MAY-17 5VTS TITLE DEHALOPEROXIDASE B Y28F MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEHALOPEROXIDASE B; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AMPHITRITE ORNATA; SOURCE 3 ORGANISM_TAXID: 129555; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET16B KEYWDS MUTANT, PEROXIDASE, PEROXYGENASE, GLOBIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.M.CAREY,R.A.GHILADI REVDAT 4 04-OCT-23 5VTS 1 LINK REVDAT 3 27-NOV-19 5VTS 1 JRNL REVDAT 2 03-APR-19 5VTS 1 JRNL REVDAT 1 23-MAY-18 5VTS 0 JRNL AUTH L.M.CAREY JRNL TITL PROBING THE STRUCTURE-FUNCTION RELATIONSHIP OF A JRNL TITL 2 MULTIFUNCTIONAL ENZYME USING CRYSTALLOGRAPHIC DIFFRACTION JRNL TITL 3 METHODS JRNL REF THESIS, NORTH CAROLINA STATE 2017 JRNL REF 2 UNIVERSITY JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 38085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.270 REMARK 3 FREE R VALUE TEST SET COUNT : 2007 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.2810 - 3.7836 0.95 2640 149 0.1627 0.1827 REMARK 3 2 3.7836 - 3.0040 0.97 2599 141 0.1531 0.1615 REMARK 3 3 3.0040 - 2.6245 0.98 2578 146 0.1482 0.1917 REMARK 3 4 2.6245 - 2.3847 0.99 2601 142 0.1480 0.1669 REMARK 3 5 2.3847 - 2.2138 0.99 2577 142 0.1373 0.1980 REMARK 3 6 2.2138 - 2.0833 0.99 2555 139 0.1323 0.1939 REMARK 3 7 2.0833 - 1.9790 0.99 2593 146 0.1309 0.1996 REMARK 3 8 1.9790 - 1.8929 1.00 2552 143 0.1359 0.1891 REMARK 3 9 1.8929 - 1.8200 1.00 2582 145 0.1287 0.1848 REMARK 3 10 1.8200 - 1.7572 1.00 2581 139 0.1326 0.2163 REMARK 3 11 1.7572 - 1.7023 1.00 2552 145 0.1378 0.2297 REMARK 3 12 1.7023 - 1.6536 1.00 2565 145 0.1430 0.2212 REMARK 3 13 1.6536 - 1.6101 1.00 2571 142 0.1560 0.2071 REMARK 3 14 1.6101 - 1.5708 0.99 2532 143 0.1732 0.2511 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2374 REMARK 3 ANGLE : 0.742 3227 REMARK 3 CHIRALITY : 0.041 326 REMARK 3 PLANARITY : 0.004 415 REMARK 3 DIHEDRAL : 19.929 1385 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VTS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000228008. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38130 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 30.275 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3IXF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, CACODYLATE BUFFER, AMMONIUM REMARK 280 PHOSPHATE, PH 6.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.36800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.78450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.11050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.78450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.36800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.11050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 33 CD NE CZ NH1 NH2 REMARK 470 LYS A 36 CD CE NZ REMARK 470 LYS A 47 NZ REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 LYS A 137 CD CE NZ REMARK 470 ARG B 33 CD NE CZ NH1 NH2 REMARK 470 LYS B 36 CD CE NZ REMARK 470 ASN B 37 CG OD1 ND2 REMARK 470 LYS B 51 CD CE NZ REMARK 470 LYS B 87 CD CE NZ REMARK 470 GLN B 118 OE1 NE2 REMARK 470 ARG B 122 CZ NH1 NH2 REMARK 470 LYS B 125 NZ REMARK 470 LYS B 137 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN B 113 HO3 GOL B 205 1.50 REMARK 500 OE2 GLU B 65 O HOH B 301 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 12 52.18 -146.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 89 NE2 REMARK 620 2 HEM A 201 NA 89.7 REMARK 620 3 HEM A 201 NB 90.7 89.8 REMARK 620 4 HEM A 201 NC 92.1 178.2 90.3 REMARK 620 5 HEM A 201 ND 91.6 89.1 177.4 90.7 REMARK 620 6 OXY A 202 O1 173.3 96.4 92.0 81.8 85.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 89 NE2 REMARK 620 2 HEM B 201 NA 93.5 REMARK 620 3 HEM B 201 NB 89.5 89.5 REMARK 620 4 HEM B 201 NC 88.5 178.0 90.2 REMARK 620 5 HEM B 201 ND 93.8 89.2 176.5 90.9 REMARK 620 6 OXY B 204 O1 170.9 95.6 90.0 82.4 87.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OXY A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OXY B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VTT RELATED DB: PDB DBREF 5VTS A 1 137 UNP Q9NAV7 Q9NAV7_9ANNE 2 138 DBREF 5VTS B 1 137 UNP Q9NAV7 Q9NAV7_9ANNE 2 138 SEQADV 5VTS PHE A 28 UNP Q9NAV7 TYR 29 ENGINEERED MUTATION SEQADV 5VTS PHE B 28 UNP Q9NAV7 TYR 29 ENGINEERED MUTATION SEQRES 1 A 137 GLY PHE LYS GLN ASP ILE ALA THR LEU ARG GLY ASP LEU SEQRES 2 A 137 ARG THR TYR ALA GLN ASP ILE PHE LEU ALA PHE LEU ASN SEQRES 3 A 137 LYS PHE PRO ASP GLU LYS ARG ASN PHE LYS ASN TYR VAL SEQRES 4 A 137 GLY LYS SER ASP GLN GLU LEU LYS SER MET ALA LYS PHE SEQRES 5 A 137 GLY ASP HIS THR GLU LYS VAL PHE ASN LEU MET MET GLU SEQRES 6 A 137 VAL ALA ASP ARG ALA THR ASP CYS VAL PRO LEU ALA SER SEQRES 7 A 137 ASP ALA SER THR LEU VAL GLN MET LYS GLN HIS SER GLY SEQRES 8 A 137 LEU THR THR GLY ASN PHE GLU LYS LEU PHE VAL ALA LEU SEQRES 9 A 137 VAL GLU TYR MET ARG ALA SER GLY GLN SER PHE ASP SER SEQRES 10 A 137 GLN SER TRP ASP ARG PHE GLY LYS ASN LEU VAL SER ALA SEQRES 11 A 137 LEU SER SER ALA GLY MET LYS SEQRES 1 B 137 GLY PHE LYS GLN ASP ILE ALA THR LEU ARG GLY ASP LEU SEQRES 2 B 137 ARG THR TYR ALA GLN ASP ILE PHE LEU ALA PHE LEU ASN SEQRES 3 B 137 LYS PHE PRO ASP GLU LYS ARG ASN PHE LYS ASN TYR VAL SEQRES 4 B 137 GLY LYS SER ASP GLN GLU LEU LYS SER MET ALA LYS PHE SEQRES 5 B 137 GLY ASP HIS THR GLU LYS VAL PHE ASN LEU MET MET GLU SEQRES 6 B 137 VAL ALA ASP ARG ALA THR ASP CYS VAL PRO LEU ALA SER SEQRES 7 B 137 ASP ALA SER THR LEU VAL GLN MET LYS GLN HIS SER GLY SEQRES 8 B 137 LEU THR THR GLY ASN PHE GLU LYS LEU PHE VAL ALA LEU SEQRES 9 B 137 VAL GLU TYR MET ARG ALA SER GLY GLN SER PHE ASP SER SEQRES 10 B 137 GLN SER TRP ASP ARG PHE GLY LYS ASN LEU VAL SER ALA SEQRES 11 B 137 LEU SER SER ALA GLY MET LYS HET HEM A 201 43 HET OXY A 202 2 HET GOL A 203 14 HET GOL A 204 14 HET HEM B 201 43 HET SO4 B 202 5 HET SO4 B 203 5 HET OXY B 204 2 HET GOL B 205 28 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM OXY OXYGEN MOLECULE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 OXY 2(O2) FORMUL 5 GOL 3(C3 H8 O3) FORMUL 8 SO4 2(O4 S 2-) FORMUL 12 HOH *233(H2 O) HELIX 1 AA1 GLY A 1 ASP A 12 1 12 HELIX 2 AA2 ASP A 12 PHE A 28 1 17 HELIX 3 AA3 PRO A 29 VAL A 39 5 11 HELIX 4 AA4 SER A 42 SER A 48 1 7 HELIX 5 AA5 MET A 49 ALA A 70 1 22 HELIX 6 AA6 LEU A 76 MET A 86 1 11 HELIX 7 AA7 LYS A 87 SER A 90 5 4 HELIX 8 AA8 THR A 93 SER A 111 1 19 HELIX 9 AA9 ASP A 116 ALA A 134 1 19 HELIX 10 AB1 PHE B 2 ASP B 12 1 11 HELIX 11 AB2 ASP B 12 PHE B 28 1 17 HELIX 12 AB3 PRO B 29 VAL B 39 5 11 HELIX 13 AB4 SER B 42 SER B 48 1 7 HELIX 14 AB5 MET B 49 ALA B 70 1 22 HELIX 15 AB6 LEU B 76 MET B 86 1 11 HELIX 16 AB7 LYS B 87 SER B 90 5 4 HELIX 17 AB8 THR B 93 SER B 111 1 19 HELIX 18 AB9 ASP B 116 ALA B 134 1 19 LINK NE2 HIS A 89 FE HEM A 201 1555 1555 2.20 LINK FE HEM A 201 O1 OXY A 202 1555 1555 2.34 LINK NE2 HIS B 89 FE HEM B 201 1555 1555 2.21 LINK FE HEM B 201 O1 OXY B 204 1555 1555 2.30 SITE 1 AC1 15 GLU A 31 ASN A 34 PHE A 35 LYS A 51 SITE 2 AC1 15 HIS A 55 LYS A 58 VAL A 59 MET A 86 SITE 3 AC1 15 GLN A 88 HIS A 89 LEU A 92 ASN A 96 SITE 4 AC1 15 PHE A 97 OXY A 202 HOH A 316 SITE 1 AC2 3 HIS A 55 VAL A 59 HEM A 201 SITE 1 AC3 7 ARG A 10 SER A 42 ASP A 68 ARG A 69 SITE 2 AC3 7 ILE B 6 ARG B 10 HOH B 344 SITE 1 AC4 5 GLN A 4 ASP A 5 THR A 8 GLN A 113 SITE 2 AC4 5 SER A 114 SITE 1 AC5 18 GLU B 31 ASN B 34 PHE B 35 LYS B 58 SITE 2 AC5 18 VAL B 59 MET B 63 MET B 86 GLN B 88 SITE 3 AC5 18 HIS B 89 LEU B 92 ASN B 96 PHE B 97 SITE 4 AC5 18 OXY B 204 HOH B 304 HOH B 310 HOH B 336 SITE 5 AC5 18 HOH B 351 HOH B 393 SITE 1 AC6 9 LYS A 32 VAL A 39 GLY A 40 GLY B 1 SITE 2 AC6 9 PHE B 2 LYS B 3 HOH B 309 HOH B 352 SITE 3 AC6 9 HOH B 396 SITE 1 AC7 9 GLY A 1 PHE A 2 LYS A 3 LYS B 32 SITE 2 AC7 9 GLY B 40 HOH B 305 HOH B 328 HOH B 377 SITE 3 AC7 9 HOH B 400 SITE 1 AC8 4 PHE B 35 HIS B 55 VAL B 59 HEM B 201 SITE 1 AC9 7 ASN A 26 HOH A 313 GLN B 4 ASP B 5 SITE 2 AC9 7 THR B 8 GLN B 113 SER B 114 CRYST1 58.736 68.221 67.569 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017025 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014658 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014800 0.00000