data_5VYS # _entry.id 5VYS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5VYS pdb_00005vys 10.2210/pdb5vys/pdb WWPDB D_1000228166 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5vyr unspecified PDB . 5VYU unspecified PDB . 5VYT unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VYS _pdbx_database_status.recvd_initial_deposition_date 2017-05-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Riegert, A.S.' 1 ? 'Chantigian, D.P.' 2 ? 'Thoden, J.B.' 3 ? 'Holden, H.M.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochemistry _citation.journal_id_ASTM BICHAW _citation.journal_id_CSD 0033 _citation.journal_id_ISSN 1520-4995 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 56 _citation.language ? _citation.page_first 3657 _citation.page_last 3668 _citation.title 'Biochemical Characterization of WbkC, an N-Formyltransferase from Brucella melitensis.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.biochem.7b00494 _citation.pdbx_database_id_PubMed 28636341 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Riegert, A.S.' 1 ? primary 'Chantigian, D.P.' 2 ? primary 'Thoden, J.B.' 3 ? primary 'Tipton, P.A.' 4 ? primary 'Holden, H.M.' 5 ? # _cell.entry_id 5VYS _cell.length_a 65.927 _cell.length_b 65.927 _cell.length_c 234.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VYS _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Gdp-mannose 4,6-dehydratase / gdp-4-amino-4,6-dideoxy-d-mannose formyltransferase' 29295.584 2 2.1.2.-,4.2.1.47 'C47S, D78A' ? ? 2 non-polymer syn 'N-[4-({[(6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid' 445.429 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 2 ? ? ? ? 5 non-polymer syn GUANOSINE 283.241 1 ? ? ? ? 6 water nat water 18.015 250 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHMAIAPNTRVLVAGYGLPAEFCVTTLIGMGVEIDKIAVATHREDNRNSGLHSMLRLRNIQFTTAAANSEEFYEFGANFA PDMIISMHYRSLIPGRFLKLAKKGSVNLHPSLLPAYRGTNSVAWVIINGESETGFSYHRMDENFDTGAILLQERISVEET DTAFSLFHRQIARAMLRLEEVILKLDQGDPGFAQLGEASYYARELPFGGVIDPRWSEVQIDRFIRAMFFPPFPPAVLKID GKVYYVPSIDIYRSLMRGIPS ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMAIAPNTRVLVAGYGLPAEFCVTTLIGMGVEIDKIAVATHREDNRNSGLHSMLRLRNIQFTTAAANSEEFYEFGANFA PDMIISMHYRSLIPGRFLKLAKKGSVNLHPSLLPAYRGTNSVAWVIINGESETGFSYHRMDENFDTGAILLQERISVEET DTAFSLFHRQIARAMLRLEEVILKLDQGDPGFAQLGEASYYARELPFGGVIDPRWSEVQIDRFIRAMFFPPFPPAVLKID GKVYYVPSIDIYRSLMRGIPS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 ALA n 1 5 ILE n 1 6 ALA n 1 7 PRO n 1 8 ASN n 1 9 THR n 1 10 ARG n 1 11 VAL n 1 12 LEU n 1 13 VAL n 1 14 ALA n 1 15 GLY n 1 16 TYR n 1 17 GLY n 1 18 LEU n 1 19 PRO n 1 20 ALA n 1 21 GLU n 1 22 PHE n 1 23 CYS n 1 24 VAL n 1 25 THR n 1 26 THR n 1 27 LEU n 1 28 ILE n 1 29 GLY n 1 30 MET n 1 31 GLY n 1 32 VAL n 1 33 GLU n 1 34 ILE n 1 35 ASP n 1 36 LYS n 1 37 ILE n 1 38 ALA n 1 39 VAL n 1 40 ALA n 1 41 THR n 1 42 HIS n 1 43 ARG n 1 44 GLU n 1 45 ASP n 1 46 ASN n 1 47 ARG n 1 48 ASN n 1 49 SER n 1 50 GLY n 1 51 LEU n 1 52 HIS n 1 53 SER n 1 54 MET n 1 55 LEU n 1 56 ARG n 1 57 LEU n 1 58 ARG n 1 59 ASN n 1 60 ILE n 1 61 GLN n 1 62 PHE n 1 63 THR n 1 64 THR n 1 65 ALA n 1 66 ALA n 1 67 ALA n 1 68 ASN n 1 69 SER n 1 70 GLU n 1 71 GLU n 1 72 PHE n 1 73 TYR n 1 74 GLU n 1 75 PHE n 1 76 GLY n 1 77 ALA n 1 78 ASN n 1 79 PHE n 1 80 ALA n 1 81 PRO n 1 82 ASP n 1 83 MET n 1 84 ILE n 1 85 ILE n 1 86 SER n 1 87 MET n 1 88 HIS n 1 89 TYR n 1 90 ARG n 1 91 SER n 1 92 LEU n 1 93 ILE n 1 94 PRO n 1 95 GLY n 1 96 ARG n 1 97 PHE n 1 98 LEU n 1 99 LYS n 1 100 LEU n 1 101 ALA n 1 102 LYS n 1 103 LYS n 1 104 GLY n 1 105 SER n 1 106 VAL n 1 107 ASN n 1 108 LEU n 1 109 HIS n 1 110 PRO n 1 111 SER n 1 112 LEU n 1 113 LEU n 1 114 PRO n 1 115 ALA n 1 116 TYR n 1 117 ARG n 1 118 GLY n 1 119 THR n 1 120 ASN n 1 121 SER n 1 122 VAL n 1 123 ALA n 1 124 TRP n 1 125 VAL n 1 126 ILE n 1 127 ILE n 1 128 ASN n 1 129 GLY n 1 130 GLU n 1 131 SER n 1 132 GLU n 1 133 THR n 1 134 GLY n 1 135 PHE n 1 136 SER n 1 137 TYR n 1 138 HIS n 1 139 ARG n 1 140 MET n 1 141 ASP n 1 142 GLU n 1 143 ASN n 1 144 PHE n 1 145 ASP n 1 146 THR n 1 147 GLY n 1 148 ALA n 1 149 ILE n 1 150 LEU n 1 151 LEU n 1 152 GLN n 1 153 GLU n 1 154 ARG n 1 155 ILE n 1 156 SER n 1 157 VAL n 1 158 GLU n 1 159 GLU n 1 160 THR n 1 161 ASP n 1 162 THR n 1 163 ALA n 1 164 PHE n 1 165 SER n 1 166 LEU n 1 167 PHE n 1 168 HIS n 1 169 ARG n 1 170 GLN n 1 171 ILE n 1 172 ALA n 1 173 ARG n 1 174 ALA n 1 175 MET n 1 176 LEU n 1 177 ARG n 1 178 LEU n 1 179 GLU n 1 180 GLU n 1 181 VAL n 1 182 ILE n 1 183 LEU n 1 184 LYS n 1 185 LEU n 1 186 ASP n 1 187 GLN n 1 188 GLY n 1 189 ASP n 1 190 PRO n 1 191 GLY n 1 192 PHE n 1 193 ALA n 1 194 GLN n 1 195 LEU n 1 196 GLY n 1 197 GLU n 1 198 ALA n 1 199 SER n 1 200 TYR n 1 201 TYR n 1 202 ALA n 1 203 ARG n 1 204 GLU n 1 205 LEU n 1 206 PRO n 1 207 PHE n 1 208 GLY n 1 209 GLY n 1 210 VAL n 1 211 ILE n 1 212 ASP n 1 213 PRO n 1 214 ARG n 1 215 TRP n 1 216 SER n 1 217 GLU n 1 218 VAL n 1 219 GLN n 1 220 ILE n 1 221 ASP n 1 222 ARG n 1 223 PHE n 1 224 ILE n 1 225 ARG n 1 226 ALA n 1 227 MET n 1 228 PHE n 1 229 PHE n 1 230 PRO n 1 231 PRO n 1 232 PHE n 1 233 PRO n 1 234 PRO n 1 235 ALA n 1 236 VAL n 1 237 LEU n 1 238 LYS n 1 239 ILE n 1 240 ASP n 1 241 GLY n 1 242 LYS n 1 243 VAL n 1 244 TYR n 1 245 TYR n 1 246 VAL n 1 247 PRO n 1 248 SER n 1 249 ILE n 1 250 ASP n 1 251 ILE n 1 252 TYR n 1 253 ARG n 1 254 SER n 1 255 LEU n 1 256 MET n 1 257 ARG n 1 258 GLY n 1 259 ILE n 1 260 PRO n 1 261 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 261 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BMEI1418 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain '16M / ATCC 23456 / NCTC 10094' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224914 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta2(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code F8WJP6_BRUME _struct_ref.pdbx_db_accession F8WJP6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAIAPNTRVLVAGYGLPAEFCVTTLIGMGVEIDKIAVATHREDNRNCGLHSMLRLRNIQFTTAAANSEEFYEFGANFDPD MIISMHYRSLIPGRFLKLAKKGSVNLHPSLLPAYRGTNSVAWVIINGESETGFSYHRMDENFDTGAILLQERISVEETDT AFSLFHRQIARAMLRLEEVILKLDQGDPGFAQLGEASYYARELPFGGVIDPRWSEVQIDRFIRAMFFPPFPPAVLKIDGK VYYVPSIDIYRSLMRGIPS ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5VYS A 3 ? 261 ? F8WJP6 1 ? 259 ? 1 259 2 1 5VYS B 3 ? 261 ? F8WJP6 1 ? 259 ? 1 259 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5VYS GLY A 1 ? UNP F8WJP6 ? ? 'expression tag' -1 1 1 5VYS HIS A 2 ? UNP F8WJP6 ? ? 'expression tag' 0 2 1 5VYS SER A 49 ? UNP F8WJP6 CYS 47 'engineered mutation' 47 3 1 5VYS ALA A 80 ? UNP F8WJP6 ASP 78 'engineered mutation' 78 4 2 5VYS GLY B 1 ? UNP F8WJP6 ? ? 'expression tag' -1 5 2 5VYS HIS B 2 ? UNP F8WJP6 ? ? 'expression tag' 0 6 2 5VYS SER B 49 ? UNP F8WJP6 CYS 47 'engineered mutation' 47 7 2 5VYS ALA B 80 ? UNP F8WJP6 ASP 78 'engineered mutation' 78 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1YJ non-polymer . 'N-[4-({[(6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid' ? 'C19 H23 N7 O6' 445.429 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GMP non-polymer . GUANOSINE ? 'C10 H13 N5 O5' 283.241 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VYS _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '19-25%PEG-5000, 5 mM GDP-perosamine, 5 mM folinic acid, 100 mM MOPS' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details montel _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'Bruker Platinum 135' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-08-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU RU200' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5VYS _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.2 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27237 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 14.1 _reflns.pdbx_Rmerge_I_obs 0.096 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.096 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.3 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3263 _reflns_shell.percent_possible_all 98.4 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.405 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.1 _reflns_shell.pdbx_Rsym_value 0.405 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5VYS _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 25866 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.965 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.62 _refine.ls_R_factor_obs 0.18874 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18507 _refine.ls_R_factor_R_free 0.25784 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1371 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.893 _refine.B_iso_mean 28.643 _refine.aniso_B[1][1] 0.96 _refine.aniso_B[2][2] 0.96 _refine.aniso_B[3][3] -1.91 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 5vyr _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.290 _refine.pdbx_overall_ESU_R_Free 0.235 _refine.overall_SU_ML 0.176 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.214 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 3913 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 104 _refine_hist.number_atoms_solvent 250 _refine_hist.number_atoms_total 4267 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 29.965 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.019 ? 4134 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 3870 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.592 1.985 ? 5617 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.984 3.000 ? 8870 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.880 5.000 ? 495 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.919 22.865 ? 192 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.306 15.000 ? 657 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.890 15.000 ? 35 'X-RAY DIFFRACTION' ? r_chiral_restr 0.093 0.200 ? 607 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 4622 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 1009 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.000 2.689 ? 1977 'X-RAY DIFFRACTION' ? r_mcbond_other 1.993 2.689 ? 1976 'X-RAY DIFFRACTION' ? r_mcangle_it 3.161 4.022 ? 2467 'X-RAY DIFFRACTION' ? r_mcangle_other 3.161 4.023 ? 2468 'X-RAY DIFFRACTION' ? r_scbond_it 2.428 3.054 ? 2157 'X-RAY DIFFRACTION' ? r_scbond_other 2.426 3.053 ? 2157 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 3.952 4.485 ? 3149 'X-RAY DIFFRACTION' ? r_long_range_B_refined 5.572 22.573 ? 4930 'X-RAY DIFFRACTION' ? r_long_range_B_other 5.573 22.580 ? 4931 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.257 _refine_ls_shell.number_reflns_R_work 1812 _refine_ls_shell.R_factor_R_work 0.276 _refine_ls_shell.percent_reflns_obs 97.85 _refine_ls_shell.R_factor_R_free 0.364 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 100 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5VYS _struct.title 'Crystal structure of the WbkC N-formyltransferase (C47S variant) from Brucella melitensis' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VYS _struct_keywords.text 'brucellosis, deoxysugar, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 16 ? MET A 30 ? TYR A 14 MET A 28 1 ? 15 HELX_P HELX_P2 AA2 GLU A 33 ? ASP A 35 ? GLU A 31 ASP A 33 5 ? 3 HELX_P HELX_P3 AA3 ASN A 48 ? ASN A 59 ? ASN A 46 ASN A 57 1 ? 12 HELX_P HELX_P4 AA4 SER A 69 ? ALA A 80 ? SER A 67 ALA A 78 1 ? 12 HELX_P HELX_P5 AA5 PRO A 94 ? LYS A 99 ? PRO A 92 LYS A 97 1 ? 6 HELX_P HELX_P6 AA6 ASN A 120 ? ASN A 128 ? ASN A 118 ASN A 126 1 ? 9 HELX_P HELX_P7 AA7 THR A 162 ? LEU A 176 ? THR A 160 LEU A 174 1 ? 15 HELX_P HELX_P8 AA8 ARG A 177 ? GLN A 187 ? ARG A 175 GLN A 185 1 ? 11 HELX_P HELX_P9 AA9 LEU A 205 ? VAL A 210 ? LEU A 203 VAL A 208 5 ? 6 HELX_P HELX_P10 AB1 SER A 216 ? PHE A 228 ? SER A 214 PHE A 226 1 ? 13 HELX_P HELX_P11 AB2 SER A 248 ? MET A 256 ? SER A 246 MET A 254 1 ? 9 HELX_P HELX_P12 AB3 TYR B 16 ? MET B 30 ? TYR B 14 MET B 28 1 ? 15 HELX_P HELX_P13 AB4 GLU B 33 ? ASP B 35 ? GLU B 31 ASP B 33 5 ? 3 HELX_P HELX_P14 AB5 ASN B 48 ? ARG B 58 ? ASN B 46 ARG B 56 1 ? 11 HELX_P HELX_P15 AB6 SER B 69 ? ALA B 80 ? SER B 67 ALA B 78 1 ? 12 HELX_P HELX_P16 AB7 PRO B 94 ? LYS B 99 ? PRO B 92 LYS B 97 1 ? 6 HELX_P HELX_P17 AB8 ASN B 120 ? ASN B 128 ? ASN B 118 ASN B 126 1 ? 9 HELX_P HELX_P18 AB9 THR B 162 ? ARG B 177 ? THR B 160 ARG B 175 1 ? 16 HELX_P HELX_P19 AC1 ARG B 177 ? GLN B 187 ? ARG B 175 GLN B 185 1 ? 11 HELX_P HELX_P20 AC2 LEU B 205 ? VAL B 210 ? LEU B 203 VAL B 208 5 ? 6 HELX_P HELX_P21 AC3 SER B 216 ? PHE B 228 ? SER B 214 PHE B 226 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 113 A . ? LEU 111 A PRO 114 A ? PRO 112 A 1 4.69 2 PRO 230 A . ? PRO 228 A PRO 231 A ? PRO 229 A 1 13.42 3 LEU 113 B . ? LEU 111 B PRO 114 B ? PRO 112 B 1 14.89 4 PRO 230 B . ? PRO 228 B PRO 231 B ? PRO 229 B 1 6.58 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 7 ? AA5 ? 2 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA4 5 6 ? anti-parallel AA4 6 7 ? anti-parallel AA5 1 2 ? parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 61 ? THR A 63 ? GLN A 59 THR A 61 AA1 2 ILE A 37 ? ALA A 40 ? ILE A 35 ALA A 38 AA1 3 VAL A 11 ? GLY A 15 ? VAL A 9 GLY A 13 AA1 4 MET A 83 ? MET A 87 ? MET A 81 MET A 85 AA1 5 SER A 105 ? HIS A 109 ? SER A 103 HIS A 107 AA1 6 GLU A 132 ? HIS A 138 ? GLU A 130 HIS A 136 AA1 7 ILE A 149 ? SER A 156 ? ILE A 147 SER A 154 AA2 1 ARG A 117 ? GLY A 118 ? ARG A 115 GLY A 116 AA2 2 TYR A 200 ? TYR A 201 ? TYR A 198 TYR A 199 AA3 1 ALA A 235 ? VAL A 236 ? ALA A 233 VAL A 234 AA3 2 TYR A 245 ? VAL A 246 ? TYR A 243 VAL A 244 AA4 1 GLN B 61 ? THR B 63 ? GLN B 59 THR B 61 AA4 2 ILE B 37 ? ALA B 40 ? ILE B 35 ALA B 38 AA4 3 VAL B 11 ? GLY B 15 ? VAL B 9 GLY B 13 AA4 4 MET B 83 ? MET B 87 ? MET B 81 MET B 85 AA4 5 SER B 105 ? HIS B 109 ? SER B 103 HIS B 107 AA4 6 GLU B 132 ? HIS B 138 ? GLU B 130 HIS B 136 AA4 7 ILE B 149 ? SER B 156 ? ILE B 147 SER B 154 AA5 1 ARG B 117 ? GLY B 118 ? ARG B 115 GLY B 116 AA5 2 TYR B 200 ? TYR B 201 ? TYR B 198 TYR B 199 AA6 1 VAL B 236 ? LYS B 238 ? VAL B 234 LYS B 236 AA6 2 VAL B 243 ? TYR B 245 ? VAL B 241 TYR B 243 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLN A 61 ? O GLN A 59 N VAL A 39 ? N VAL A 37 AA1 2 3 O ALA A 40 ? O ALA A 38 N VAL A 13 ? N VAL A 11 AA1 3 4 N ALA A 14 ? N ALA A 12 O ILE A 85 ? O ILE A 83 AA1 4 5 N SER A 86 ? N SER A 84 O VAL A 106 ? O VAL A 104 AA1 5 6 N HIS A 109 ? N HIS A 107 O SER A 136 ? O SER A 134 AA1 6 7 N TYR A 137 ? N TYR A 135 O LEU A 151 ? O LEU A 149 AA2 1 2 N ARG A 117 ? N ARG A 115 O TYR A 201 ? O TYR A 199 AA3 1 2 N ALA A 235 ? N ALA A 233 O VAL A 246 ? O VAL A 244 AA4 1 2 O GLN B 61 ? O GLN B 59 N VAL B 39 ? N VAL B 37 AA4 2 3 O ALA B 40 ? O ALA B 38 N VAL B 13 ? N VAL B 11 AA4 3 4 N LEU B 12 ? N LEU B 10 O ILE B 85 ? O ILE B 83 AA4 4 5 N SER B 86 ? N SER B 84 O VAL B 106 ? O VAL B 104 AA4 5 6 N HIS B 109 ? N HIS B 107 O SER B 136 ? O SER B 134 AA4 6 7 N TYR B 137 ? N TYR B 135 O LEU B 151 ? O LEU B 149 AA5 1 2 N ARG B 117 ? N ARG B 115 O TYR B 201 ? O TYR B 199 AA6 1 2 N LEU B 237 ? N LEU B 235 O TYR B 244 ? O TYR B 242 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 1YJ 301 ? 12 'binding site for residue 1YJ A 301' AC2 Software A EDO 302 ? 5 'binding site for residue EDO A 302' AC3 Software A GDP 303 ? 16 'binding site for residue GDP A 303' AC4 Software B 1YJ 301 ? 12 'binding site for residue 1YJ B 301' AC5 Software B GDP 302 ? 14 'binding site for residue GDP B 302' AC6 Software B GMP 303 ? 9 'binding site for residue GMP B 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 TYR A 89 ? TYR A 87 . ? 1_555 ? 2 AC1 12 SER A 91 ? SER A 89 . ? 1_555 ? 3 AC1 12 LEU A 92 ? LEU A 90 . ? 1_555 ? 4 AC1 12 ILE A 93 ? ILE A 91 . ? 1_555 ? 5 AC1 12 ASN A 107 ? ASN A 105 . ? 1_555 ? 6 AC1 12 HIS A 138 ? HIS A 136 . ? 1_555 ? 7 AC1 12 ASP A 141 ? ASP A 139 . ? 1_555 ? 8 AC1 12 ASN A 143 ? ASN A 141 . ? 1_555 ? 9 AC1 12 PHE A 144 ? PHE A 142 . ? 1_555 ? 10 AC1 12 ASP A 145 ? ASP A 143 . ? 1_555 ? 11 AC1 12 HOH I . ? HOH A 401 . ? 1_555 ? 12 AC1 12 HOH I . ? HOH A 441 . ? 1_555 ? 13 AC2 5 GLU A 130 ? GLU A 128 . ? 1_555 ? 14 AC2 5 GLU A 158 ? GLU A 156 . ? 1_555 ? 15 AC2 5 GLU A 159 ? GLU A 157 . ? 1_555 ? 16 AC2 5 ARG A 222 ? ARG A 220 . ? 1_555 ? 17 AC2 5 ARG A 225 ? ARG A 223 . ? 1_555 ? 18 AC3 16 ARG A 47 ? ARG A 45 . ? 1_555 ? 19 AC3 16 ARG A 90 ? ARG A 88 . ? 1_555 ? 20 AC3 16 THR A 119 ? THR A 117 . ? 1_555 ? 21 AC3 16 ASN A 120 ? ASN A 118 . ? 1_555 ? 22 AC3 16 VAL A 122 ? VAL A 120 . ? 1_555 ? 23 AC3 16 ALA A 123 ? ALA A 121 . ? 1_555 ? 24 AC3 16 ALA A 163 ? ALA A 161 . ? 1_555 ? 25 AC3 16 ARG A 203 ? ARG A 201 . ? 1_555 ? 26 AC3 16 MET A 227 ? MET A 225 . ? 1_555 ? 27 AC3 16 PHE A 229 ? PHE A 227 . ? 1_555 ? 28 AC3 16 PHE A 232 ? PHE A 230 . ? 1_555 ? 29 AC3 16 PRO A 233 ? PRO A 231 . ? 1_555 ? 30 AC3 16 HOH I . ? HOH A 415 . ? 1_555 ? 31 AC3 16 HOH I . ? HOH A 445 . ? 1_555 ? 32 AC3 16 HOH I . ? HOH A 472 . ? 1_555 ? 33 AC3 16 HOH I . ? HOH A 480 . ? 1_555 ? 34 AC4 12 SER B 91 ? SER B 89 . ? 1_555 ? 35 AC4 12 ILE B 93 ? ILE B 91 . ? 1_555 ? 36 AC4 12 LEU B 98 ? LEU B 96 . ? 1_555 ? 37 AC4 12 ASN B 107 ? ASN B 105 . ? 1_555 ? 38 AC4 12 HIS B 138 ? HIS B 136 . ? 1_555 ? 39 AC4 12 MET B 140 ? MET B 138 . ? 1_555 ? 40 AC4 12 ASP B 141 ? ASP B 139 . ? 1_555 ? 41 AC4 12 ASN B 143 ? ASN B 141 . ? 1_555 ? 42 AC4 12 PHE B 144 ? PHE B 142 . ? 1_555 ? 43 AC4 12 ASP B 145 ? ASP B 143 . ? 1_555 ? 44 AC4 12 HOH J . ? HOH B 408 . ? 1_555 ? 45 AC4 12 HOH J . ? HOH B 417 . ? 1_555 ? 46 AC5 14 ARG B 47 ? ARG B 45 . ? 1_555 ? 47 AC5 14 ARG B 90 ? ARG B 88 . ? 1_555 ? 48 AC5 14 ASN B 120 ? ASN B 118 . ? 1_555 ? 49 AC5 14 ALA B 163 ? ALA B 161 . ? 1_555 ? 50 AC5 14 PHE B 167 ? PHE B 165 . ? 1_555 ? 51 AC5 14 LEU B 205 ? LEU B 203 . ? 1_555 ? 52 AC5 14 MET B 227 ? MET B 225 . ? 1_555 ? 53 AC5 14 PHE B 229 ? PHE B 227 . ? 1_555 ? 54 AC5 14 PHE B 232 ? PHE B 230 . ? 1_555 ? 55 AC5 14 PRO B 233 ? PRO B 231 . ? 1_555 ? 56 AC5 14 HOH J . ? HOH B 402 . ? 1_555 ? 57 AC5 14 HOH J . ? HOH B 432 . ? 1_555 ? 58 AC5 14 HOH J . ? HOH B 443 . ? 1_555 ? 59 AC5 14 HOH J . ? HOH B 479 . ? 1_555 ? 60 AC6 9 ARG A 214 ? ARG A 212 . ? 1_565 ? 61 AC6 9 ARG B 90 ? ARG B 88 . ? 1_555 ? 62 AC6 9 SER B 91 ? SER B 89 . ? 1_555 ? 63 AC6 9 GLY B 118 ? GLY B 116 . ? 1_555 ? 64 AC6 9 THR B 119 ? THR B 117 . ? 1_555 ? 65 AC6 9 PHE B 144 ? PHE B 142 . ? 1_555 ? 66 AC6 9 ASP B 145 ? ASP B 143 . ? 1_555 ? 67 AC6 9 ARG B 203 ? ARG B 201 . ? 1_555 ? 68 AC6 9 HOH J . ? HOH B 406 . ? 1_555 ? # _atom_sites.entry_id 5VYS _atom_sites.fract_transf_matrix[1][1] 0.015168 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015168 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004261 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 HIS 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 ALA 4 2 2 ALA ALA A . n A 1 5 ILE 5 3 3 ILE ILE A . n A 1 6 ALA 6 4 4 ALA ALA A . n A 1 7 PRO 7 5 5 PRO PRO A . n A 1 8 ASN 8 6 6 ASN ASN A . n A 1 9 THR 9 7 7 THR THR A . n A 1 10 ARG 10 8 8 ARG ARG A . n A 1 11 VAL 11 9 9 VAL VAL A . n A 1 12 LEU 12 10 10 LEU LEU A . n A 1 13 VAL 13 11 11 VAL VAL A . n A 1 14 ALA 14 12 12 ALA ALA A . n A 1 15 GLY 15 13 13 GLY GLY A . n A 1 16 TYR 16 14 14 TYR TYR A . n A 1 17 GLY 17 15 15 GLY GLY A . n A 1 18 LEU 18 16 16 LEU LEU A . n A 1 19 PRO 19 17 17 PRO PRO A . n A 1 20 ALA 20 18 18 ALA ALA A . n A 1 21 GLU 21 19 19 GLU GLU A . n A 1 22 PHE 22 20 20 PHE PHE A . n A 1 23 CYS 23 21 21 CYS CYS A . n A 1 24 VAL 24 22 22 VAL VAL A . n A 1 25 THR 25 23 23 THR THR A . n A 1 26 THR 26 24 24 THR THR A . n A 1 27 LEU 27 25 25 LEU LEU A . n A 1 28 ILE 28 26 26 ILE ILE A . n A 1 29 GLY 29 27 27 GLY GLY A . n A 1 30 MET 30 28 28 MET MET A . n A 1 31 GLY 31 29 29 GLY GLY A . n A 1 32 VAL 32 30 30 VAL VAL A . n A 1 33 GLU 33 31 31 GLU GLU A . n A 1 34 ILE 34 32 32 ILE ILE A . n A 1 35 ASP 35 33 33 ASP ASP A . n A 1 36 LYS 36 34 34 LYS LYS A . n A 1 37 ILE 37 35 35 ILE ILE A . n A 1 38 ALA 38 36 36 ALA ALA A . n A 1 39 VAL 39 37 37 VAL VAL A . n A 1 40 ALA 40 38 38 ALA ALA A . n A 1 41 THR 41 39 39 THR THR A . n A 1 42 HIS 42 40 40 HIS HIS A . n A 1 43 ARG 43 41 41 ARG ARG A . n A 1 44 GLU 44 42 42 GLU GLU A . n A 1 45 ASP 45 43 43 ASP ASP A . n A 1 46 ASN 46 44 44 ASN ASN A . n A 1 47 ARG 47 45 45 ARG ARG A . n A 1 48 ASN 48 46 46 ASN ASN A . n A 1 49 SER 49 47 47 SER SER A . n A 1 50 GLY 50 48 48 GLY GLY A . n A 1 51 LEU 51 49 49 LEU LEU A . n A 1 52 HIS 52 50 50 HIS HIS A . n A 1 53 SER 53 51 51 SER SER A . n A 1 54 MET 54 52 52 MET MET A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 ARG 56 54 54 ARG ARG A . n A 1 57 LEU 57 55 55 LEU LEU A . n A 1 58 ARG 58 56 56 ARG ARG A . n A 1 59 ASN 59 57 57 ASN ASN A . n A 1 60 ILE 60 58 58 ILE ILE A . n A 1 61 GLN 61 59 59 GLN GLN A . n A 1 62 PHE 62 60 60 PHE PHE A . n A 1 63 THR 63 61 61 THR THR A . n A 1 64 THR 64 62 62 THR THR A . n A 1 65 ALA 65 63 63 ALA ALA A . n A 1 66 ALA 66 64 64 ALA ALA A . n A 1 67 ALA 67 65 65 ALA ALA A . n A 1 68 ASN 68 66 66 ASN ASN A . n A 1 69 SER 69 67 67 SER SER A . n A 1 70 GLU 70 68 68 GLU GLU A . n A 1 71 GLU 71 69 69 GLU GLU A . n A 1 72 PHE 72 70 70 PHE PHE A . n A 1 73 TYR 73 71 71 TYR TYR A . n A 1 74 GLU 74 72 72 GLU GLU A . n A 1 75 PHE 75 73 73 PHE PHE A . n A 1 76 GLY 76 74 74 GLY GLY A . n A 1 77 ALA 77 75 75 ALA ALA A . n A 1 78 ASN 78 76 76 ASN ASN A . n A 1 79 PHE 79 77 77 PHE PHE A . n A 1 80 ALA 80 78 78 ALA ALA A . n A 1 81 PRO 81 79 79 PRO PRO A . n A 1 82 ASP 82 80 80 ASP ASP A . n A 1 83 MET 83 81 81 MET MET A . n A 1 84 ILE 84 82 82 ILE ILE A . n A 1 85 ILE 85 83 83 ILE ILE A . n A 1 86 SER 86 84 84 SER SER A . n A 1 87 MET 87 85 85 MET MET A . n A 1 88 HIS 88 86 86 HIS HIS A . n A 1 89 TYR 89 87 87 TYR TYR A . n A 1 90 ARG 90 88 88 ARG ARG A . n A 1 91 SER 91 89 89 SER SER A . n A 1 92 LEU 92 90 90 LEU LEU A . n A 1 93 ILE 93 91 91 ILE ILE A . n A 1 94 PRO 94 92 92 PRO PRO A . n A 1 95 GLY 95 93 93 GLY GLY A . n A 1 96 ARG 96 94 94 ARG ARG A . n A 1 97 PHE 97 95 95 PHE PHE A . n A 1 98 LEU 98 96 96 LEU LEU A . n A 1 99 LYS 99 97 97 LYS LYS A . n A 1 100 LEU 100 98 98 LEU LEU A . n A 1 101 ALA 101 99 99 ALA ALA A . n A 1 102 LYS 102 100 100 LYS LYS A . n A 1 103 LYS 103 101 101 LYS LYS A . n A 1 104 GLY 104 102 102 GLY GLY A . n A 1 105 SER 105 103 103 SER SER A . n A 1 106 VAL 106 104 104 VAL VAL A . n A 1 107 ASN 107 105 105 ASN ASN A . n A 1 108 LEU 108 106 106 LEU LEU A . n A 1 109 HIS 109 107 107 HIS HIS A . n A 1 110 PRO 110 108 108 PRO PRO A . n A 1 111 SER 111 109 109 SER SER A . n A 1 112 LEU 112 110 110 LEU LEU A . n A 1 113 LEU 113 111 111 LEU LEU A . n A 1 114 PRO 114 112 112 PRO PRO A . n A 1 115 ALA 115 113 113 ALA ALA A . n A 1 116 TYR 116 114 114 TYR TYR A . n A 1 117 ARG 117 115 115 ARG ARG A . n A 1 118 GLY 118 116 116 GLY GLY A . n A 1 119 THR 119 117 117 THR THR A . n A 1 120 ASN 120 118 118 ASN ASN A . n A 1 121 SER 121 119 119 SER SER A . n A 1 122 VAL 122 120 120 VAL VAL A . n A 1 123 ALA 123 121 121 ALA ALA A . n A 1 124 TRP 124 122 122 TRP TRP A . n A 1 125 VAL 125 123 123 VAL VAL A . n A 1 126 ILE 126 124 124 ILE ILE A . n A 1 127 ILE 127 125 125 ILE ILE A . n A 1 128 ASN 128 126 126 ASN ASN A . n A 1 129 GLY 129 127 127 GLY GLY A . n A 1 130 GLU 130 128 128 GLU GLU A . n A 1 131 SER 131 129 129 SER SER A . n A 1 132 GLU 132 130 130 GLU GLU A . n A 1 133 THR 133 131 131 THR THR A . n A 1 134 GLY 134 132 132 GLY GLY A . n A 1 135 PHE 135 133 133 PHE PHE A . n A 1 136 SER 136 134 134 SER SER A . n A 1 137 TYR 137 135 135 TYR TYR A . n A 1 138 HIS 138 136 136 HIS HIS A . n A 1 139 ARG 139 137 137 ARG ARG A . n A 1 140 MET 140 138 138 MET MET A . n A 1 141 ASP 141 139 139 ASP ASP A . n A 1 142 GLU 142 140 140 GLU GLU A . n A 1 143 ASN 143 141 141 ASN ASN A . n A 1 144 PHE 144 142 142 PHE PHE A . n A 1 145 ASP 145 143 143 ASP ASP A . n A 1 146 THR 146 144 144 THR THR A . n A 1 147 GLY 147 145 145 GLY GLY A . n A 1 148 ALA 148 146 146 ALA ALA A . n A 1 149 ILE 149 147 147 ILE ILE A . n A 1 150 LEU 150 148 148 LEU LEU A . n A 1 151 LEU 151 149 149 LEU LEU A . n A 1 152 GLN 152 150 150 GLN GLN A . n A 1 153 GLU 153 151 151 GLU GLU A . n A 1 154 ARG 154 152 152 ARG ARG A . n A 1 155 ILE 155 153 153 ILE ILE A . n A 1 156 SER 156 154 154 SER SER A . n A 1 157 VAL 157 155 155 VAL VAL A . n A 1 158 GLU 158 156 156 GLU GLU A . n A 1 159 GLU 159 157 157 GLU GLU A . n A 1 160 THR 160 158 158 THR THR A . n A 1 161 ASP 161 159 159 ASP ASP A . n A 1 162 THR 162 160 160 THR THR A . n A 1 163 ALA 163 161 161 ALA ALA A . n A 1 164 PHE 164 162 162 PHE PHE A . n A 1 165 SER 165 163 163 SER SER A . n A 1 166 LEU 166 164 164 LEU LEU A . n A 1 167 PHE 167 165 165 PHE PHE A . n A 1 168 HIS 168 166 166 HIS HIS A . n A 1 169 ARG 169 167 167 ARG ARG A . n A 1 170 GLN 170 168 168 GLN GLN A . n A 1 171 ILE 171 169 169 ILE ILE A . n A 1 172 ALA 172 170 170 ALA ALA A . n A 1 173 ARG 173 171 171 ARG ARG A . n A 1 174 ALA 174 172 172 ALA ALA A . n A 1 175 MET 175 173 173 MET MET A . n A 1 176 LEU 176 174 174 LEU LEU A . n A 1 177 ARG 177 175 175 ARG ARG A . n A 1 178 LEU 178 176 176 LEU LEU A . n A 1 179 GLU 179 177 177 GLU GLU A . n A 1 180 GLU 180 178 178 GLU GLU A . n A 1 181 VAL 181 179 179 VAL VAL A . n A 1 182 ILE 182 180 180 ILE ILE A . n A 1 183 LEU 183 181 181 LEU LEU A . n A 1 184 LYS 184 182 182 LYS LYS A . n A 1 185 LEU 185 183 183 LEU LEU A . n A 1 186 ASP 186 184 184 ASP ASP A . n A 1 187 GLN 187 185 185 GLN GLN A . n A 1 188 GLY 188 186 186 GLY GLY A . n A 1 189 ASP 189 187 187 ASP ASP A . n A 1 190 PRO 190 188 188 PRO PRO A . n A 1 191 GLY 191 189 189 GLY GLY A . n A 1 192 PHE 192 190 190 PHE PHE A . n A 1 193 ALA 193 191 191 ALA ALA A . n A 1 194 GLN 194 192 192 GLN GLN A . n A 1 195 LEU 195 193 193 LEU LEU A . n A 1 196 GLY 196 194 194 GLY GLY A . n A 1 197 GLU 197 195 195 GLU GLU A . n A 1 198 ALA 198 196 196 ALA ALA A . n A 1 199 SER 199 197 197 SER SER A . n A 1 200 TYR 200 198 198 TYR TYR A . n A 1 201 TYR 201 199 199 TYR TYR A . n A 1 202 ALA 202 200 200 ALA ALA A . n A 1 203 ARG 203 201 201 ARG ARG A . n A 1 204 GLU 204 202 202 GLU GLU A . n A 1 205 LEU 205 203 203 LEU LEU A . n A 1 206 PRO 206 204 204 PRO PRO A . n A 1 207 PHE 207 205 205 PHE PHE A . n A 1 208 GLY 208 206 206 GLY GLY A . n A 1 209 GLY 209 207 207 GLY GLY A . n A 1 210 VAL 210 208 208 VAL VAL A . n A 1 211 ILE 211 209 209 ILE ILE A . n A 1 212 ASP 212 210 210 ASP ASP A . n A 1 213 PRO 213 211 211 PRO PRO A . n A 1 214 ARG 214 212 212 ARG ARG A . n A 1 215 TRP 215 213 213 TRP TRP A . n A 1 216 SER 216 214 214 SER SER A . n A 1 217 GLU 217 215 215 GLU GLU A . n A 1 218 VAL 218 216 216 VAL VAL A . n A 1 219 GLN 219 217 217 GLN GLN A . n A 1 220 ILE 220 218 218 ILE ILE A . n A 1 221 ASP 221 219 219 ASP ASP A . n A 1 222 ARG 222 220 220 ARG ARG A . n A 1 223 PHE 223 221 221 PHE PHE A . n A 1 224 ILE 224 222 222 ILE ILE A . n A 1 225 ARG 225 223 223 ARG ARG A . n A 1 226 ALA 226 224 224 ALA ALA A . n A 1 227 MET 227 225 225 MET MET A . n A 1 228 PHE 228 226 226 PHE PHE A . n A 1 229 PHE 229 227 227 PHE PHE A . n A 1 230 PRO 230 228 228 PRO PRO A . n A 1 231 PRO 231 229 229 PRO PRO A . n A 1 232 PHE 232 230 230 PHE PHE A . n A 1 233 PRO 233 231 231 PRO PRO A . n A 1 234 PRO 234 232 232 PRO PRO A . n A 1 235 ALA 235 233 233 ALA ALA A . n A 1 236 VAL 236 234 234 VAL VAL A . n A 1 237 LEU 237 235 235 LEU LEU A . n A 1 238 LYS 238 236 236 LYS LYS A . n A 1 239 ILE 239 237 ? ? ? A . n A 1 240 ASP 240 238 ? ? ? A . n A 1 241 GLY 241 239 ? ? ? A . n A 1 242 LYS 242 240 ? ? ? A . n A 1 243 VAL 243 241 ? ? ? A . n A 1 244 TYR 244 242 242 TYR TYR A . n A 1 245 TYR 245 243 243 TYR TYR A . n A 1 246 VAL 246 244 244 VAL VAL A . n A 1 247 PRO 247 245 245 PRO PRO A . n A 1 248 SER 248 246 246 SER SER A . n A 1 249 ILE 249 247 247 ILE ILE A . n A 1 250 ASP 250 248 248 ASP ASP A . n A 1 251 ILE 251 249 249 ILE ILE A . n A 1 252 TYR 252 250 250 TYR TYR A . n A 1 253 ARG 253 251 251 ARG ARG A . n A 1 254 SER 254 252 252 SER SER A . n A 1 255 LEU 255 253 253 LEU LEU A . n A 1 256 MET 256 254 254 MET MET A . n A 1 257 ARG 257 255 ? ? ? A . n A 1 258 GLY 258 256 ? ? ? A . n A 1 259 ILE 259 257 ? ? ? A . n A 1 260 PRO 260 258 ? ? ? A . n A 1 261 SER 261 259 ? ? ? A . n B 1 1 GLY 1 -1 ? ? ? B . n B 1 2 HIS 2 0 ? ? ? B . n B 1 3 MET 3 1 1 MET MET B . n B 1 4 ALA 4 2 2 ALA ALA B . n B 1 5 ILE 5 3 3 ILE ILE B . n B 1 6 ALA 6 4 4 ALA ALA B . n B 1 7 PRO 7 5 5 PRO PRO B . n B 1 8 ASN 8 6 6 ASN ASN B . n B 1 9 THR 9 7 7 THR THR B . n B 1 10 ARG 10 8 8 ARG ARG B . n B 1 11 VAL 11 9 9 VAL VAL B . n B 1 12 LEU 12 10 10 LEU LEU B . n B 1 13 VAL 13 11 11 VAL VAL B . n B 1 14 ALA 14 12 12 ALA ALA B . n B 1 15 GLY 15 13 13 GLY GLY B . n B 1 16 TYR 16 14 14 TYR TYR B . n B 1 17 GLY 17 15 15 GLY GLY B . n B 1 18 LEU 18 16 16 LEU LEU B . n B 1 19 PRO 19 17 17 PRO PRO B . n B 1 20 ALA 20 18 18 ALA ALA B . n B 1 21 GLU 21 19 19 GLU GLU B . n B 1 22 PHE 22 20 20 PHE PHE B . n B 1 23 CYS 23 21 21 CYS CYS B . n B 1 24 VAL 24 22 22 VAL VAL B . n B 1 25 THR 25 23 23 THR THR B . n B 1 26 THR 26 24 24 THR THR B . n B 1 27 LEU 27 25 25 LEU LEU B . n B 1 28 ILE 28 26 26 ILE ILE B . n B 1 29 GLY 29 27 27 GLY GLY B . n B 1 30 MET 30 28 28 MET MET B . n B 1 31 GLY 31 29 29 GLY GLY B . n B 1 32 VAL 32 30 30 VAL VAL B . n B 1 33 GLU 33 31 31 GLU GLU B . n B 1 34 ILE 34 32 32 ILE ILE B . n B 1 35 ASP 35 33 33 ASP ASP B . n B 1 36 LYS 36 34 34 LYS LYS B . n B 1 37 ILE 37 35 35 ILE ILE B . n B 1 38 ALA 38 36 36 ALA ALA B . n B 1 39 VAL 39 37 37 VAL VAL B . n B 1 40 ALA 40 38 38 ALA ALA B . n B 1 41 THR 41 39 39 THR THR B . n B 1 42 HIS 42 40 40 HIS HIS B . n B 1 43 ARG 43 41 41 ARG ARG B . n B 1 44 GLU 44 42 42 GLU GLU B . n B 1 45 ASP 45 43 43 ASP ASP B . n B 1 46 ASN 46 44 44 ASN ASN B . n B 1 47 ARG 47 45 45 ARG ARG B . n B 1 48 ASN 48 46 46 ASN ASN B . n B 1 49 SER 49 47 47 SER SER B . n B 1 50 GLY 50 48 48 GLY GLY B . n B 1 51 LEU 51 49 49 LEU LEU B . n B 1 52 HIS 52 50 50 HIS HIS B . n B 1 53 SER 53 51 51 SER SER B . n B 1 54 MET 54 52 52 MET MET B . n B 1 55 LEU 55 53 53 LEU LEU B . n B 1 56 ARG 56 54 54 ARG ARG B . n B 1 57 LEU 57 55 55 LEU LEU B . n B 1 58 ARG 58 56 56 ARG ARG B . n B 1 59 ASN 59 57 57 ASN ASN B . n B 1 60 ILE 60 58 58 ILE ILE B . n B 1 61 GLN 61 59 59 GLN GLN B . n B 1 62 PHE 62 60 60 PHE PHE B . n B 1 63 THR 63 61 61 THR THR B . n B 1 64 THR 64 62 62 THR THR B . n B 1 65 ALA 65 63 63 ALA ALA B . n B 1 66 ALA 66 64 64 ALA ALA B . n B 1 67 ALA 67 65 65 ALA ALA B . n B 1 68 ASN 68 66 66 ASN ASN B . n B 1 69 SER 69 67 67 SER SER B . n B 1 70 GLU 70 68 68 GLU GLU B . n B 1 71 GLU 71 69 69 GLU GLU B . n B 1 72 PHE 72 70 70 PHE PHE B . n B 1 73 TYR 73 71 71 TYR TYR B . n B 1 74 GLU 74 72 72 GLU GLU B . n B 1 75 PHE 75 73 73 PHE PHE B . n B 1 76 GLY 76 74 74 GLY GLY B . n B 1 77 ALA 77 75 75 ALA ALA B . n B 1 78 ASN 78 76 76 ASN ASN B . n B 1 79 PHE 79 77 77 PHE PHE B . n B 1 80 ALA 80 78 78 ALA ALA B . n B 1 81 PRO 81 79 79 PRO PRO B . n B 1 82 ASP 82 80 80 ASP ASP B . n B 1 83 MET 83 81 81 MET MET B . n B 1 84 ILE 84 82 82 ILE ILE B . n B 1 85 ILE 85 83 83 ILE ILE B . n B 1 86 SER 86 84 84 SER SER B . n B 1 87 MET 87 85 85 MET MET B . n B 1 88 HIS 88 86 86 HIS HIS B . n B 1 89 TYR 89 87 87 TYR TYR B . n B 1 90 ARG 90 88 88 ARG ARG B . n B 1 91 SER 91 89 89 SER SER B . n B 1 92 LEU 92 90 90 LEU LEU B . n B 1 93 ILE 93 91 91 ILE ILE B . n B 1 94 PRO 94 92 92 PRO PRO B . n B 1 95 GLY 95 93 93 GLY GLY B . n B 1 96 ARG 96 94 94 ARG ARG B . n B 1 97 PHE 97 95 95 PHE PHE B . n B 1 98 LEU 98 96 96 LEU LEU B . n B 1 99 LYS 99 97 97 LYS LYS B . n B 1 100 LEU 100 98 98 LEU LEU B . n B 1 101 ALA 101 99 99 ALA ALA B . n B 1 102 LYS 102 100 100 LYS LYS B . n B 1 103 LYS 103 101 101 LYS LYS B . n B 1 104 GLY 104 102 102 GLY GLY B . n B 1 105 SER 105 103 103 SER SER B . n B 1 106 VAL 106 104 104 VAL VAL B . n B 1 107 ASN 107 105 105 ASN ASN B . n B 1 108 LEU 108 106 106 LEU LEU B . n B 1 109 HIS 109 107 107 HIS HIS B . n B 1 110 PRO 110 108 108 PRO PRO B . n B 1 111 SER 111 109 109 SER SER B . n B 1 112 LEU 112 110 110 LEU LEU B . n B 1 113 LEU 113 111 111 LEU LEU B . n B 1 114 PRO 114 112 112 PRO PRO B . n B 1 115 ALA 115 113 113 ALA ALA B . n B 1 116 TYR 116 114 114 TYR TYR B . n B 1 117 ARG 117 115 115 ARG ARG B . n B 1 118 GLY 118 116 116 GLY GLY B . n B 1 119 THR 119 117 117 THR THR B . n B 1 120 ASN 120 118 118 ASN ASN B . n B 1 121 SER 121 119 119 SER SER B . n B 1 122 VAL 122 120 120 VAL VAL B . n B 1 123 ALA 123 121 121 ALA ALA B . n B 1 124 TRP 124 122 122 TRP TRP B . n B 1 125 VAL 125 123 123 VAL VAL B . n B 1 126 ILE 126 124 124 ILE ILE B . n B 1 127 ILE 127 125 125 ILE ILE B . n B 1 128 ASN 128 126 126 ASN ASN B . n B 1 129 GLY 129 127 127 GLY GLY B . n B 1 130 GLU 130 128 128 GLU GLU B . n B 1 131 SER 131 129 129 SER SER B . n B 1 132 GLU 132 130 130 GLU GLU B . n B 1 133 THR 133 131 131 THR THR B . n B 1 134 GLY 134 132 132 GLY GLY B . n B 1 135 PHE 135 133 133 PHE PHE B . n B 1 136 SER 136 134 134 SER SER B . n B 1 137 TYR 137 135 135 TYR TYR B . n B 1 138 HIS 138 136 136 HIS HIS B . n B 1 139 ARG 139 137 137 ARG ARG B . n B 1 140 MET 140 138 138 MET MET B . n B 1 141 ASP 141 139 139 ASP ASP B . n B 1 142 GLU 142 140 140 GLU GLU B . n B 1 143 ASN 143 141 141 ASN ASN B . n B 1 144 PHE 144 142 142 PHE PHE B . n B 1 145 ASP 145 143 143 ASP ASP B . n B 1 146 THR 146 144 144 THR THR B . n B 1 147 GLY 147 145 145 GLY GLY B . n B 1 148 ALA 148 146 146 ALA ALA B . n B 1 149 ILE 149 147 147 ILE ILE B . n B 1 150 LEU 150 148 148 LEU LEU B . n B 1 151 LEU 151 149 149 LEU LEU B . n B 1 152 GLN 152 150 150 GLN GLN B . n B 1 153 GLU 153 151 151 GLU GLU B . n B 1 154 ARG 154 152 152 ARG ARG B . n B 1 155 ILE 155 153 153 ILE ILE B . n B 1 156 SER 156 154 154 SER SER B . n B 1 157 VAL 157 155 155 VAL VAL B . n B 1 158 GLU 158 156 156 GLU GLU B . n B 1 159 GLU 159 157 157 GLU GLU B . n B 1 160 THR 160 158 158 THR THR B . n B 1 161 ASP 161 159 159 ASP ASP B . n B 1 162 THR 162 160 160 THR THR B . n B 1 163 ALA 163 161 161 ALA ALA B . n B 1 164 PHE 164 162 162 PHE PHE B . n B 1 165 SER 165 163 163 SER SER B . n B 1 166 LEU 166 164 164 LEU LEU B . n B 1 167 PHE 167 165 165 PHE PHE B . n B 1 168 HIS 168 166 166 HIS HIS B . n B 1 169 ARG 169 167 167 ARG ARG B . n B 1 170 GLN 170 168 168 GLN GLN B . n B 1 171 ILE 171 169 169 ILE ILE B . n B 1 172 ALA 172 170 170 ALA ALA B . n B 1 173 ARG 173 171 171 ARG ARG B . n B 1 174 ALA 174 172 172 ALA ALA B . n B 1 175 MET 175 173 173 MET MET B . n B 1 176 LEU 176 174 174 LEU LEU B . n B 1 177 ARG 177 175 175 ARG ARG B . n B 1 178 LEU 178 176 176 LEU LEU B . n B 1 179 GLU 179 177 177 GLU GLU B . n B 1 180 GLU 180 178 178 GLU GLU B . n B 1 181 VAL 181 179 179 VAL VAL B . n B 1 182 ILE 182 180 180 ILE ILE B . n B 1 183 LEU 183 181 181 LEU LEU B . n B 1 184 LYS 184 182 182 LYS LYS B . n B 1 185 LEU 185 183 183 LEU LEU B . n B 1 186 ASP 186 184 184 ASP ASP B . n B 1 187 GLN 187 185 185 GLN GLN B . n B 1 188 GLY 188 186 186 GLY GLY B . n B 1 189 ASP 189 187 187 ASP ASP B . n B 1 190 PRO 190 188 188 PRO PRO B . n B 1 191 GLY 191 189 189 GLY GLY B . n B 1 192 PHE 192 190 190 PHE PHE B . n B 1 193 ALA 193 191 191 ALA ALA B . n B 1 194 GLN 194 192 192 GLN GLN B . n B 1 195 LEU 195 193 193 LEU LEU B . n B 1 196 GLY 196 194 194 GLY GLY B . n B 1 197 GLU 197 195 195 GLU GLU B . n B 1 198 ALA 198 196 196 ALA ALA B . n B 1 199 SER 199 197 197 SER SER B . n B 1 200 TYR 200 198 198 TYR TYR B . n B 1 201 TYR 201 199 199 TYR TYR B . n B 1 202 ALA 202 200 200 ALA ALA B . n B 1 203 ARG 203 201 201 ARG ARG B . n B 1 204 GLU 204 202 202 GLU GLU B . n B 1 205 LEU 205 203 203 LEU LEU B . n B 1 206 PRO 206 204 204 PRO PRO B . n B 1 207 PHE 207 205 205 PHE PHE B . n B 1 208 GLY 208 206 206 GLY GLY B . n B 1 209 GLY 209 207 207 GLY GLY B . n B 1 210 VAL 210 208 208 VAL VAL B . n B 1 211 ILE 211 209 209 ILE ILE B . n B 1 212 ASP 212 210 210 ASP ASP B . n B 1 213 PRO 213 211 211 PRO PRO B . n B 1 214 ARG 214 212 212 ARG ARG B . n B 1 215 TRP 215 213 213 TRP TRP B . n B 1 216 SER 216 214 214 SER SER B . n B 1 217 GLU 217 215 215 GLU GLU B . n B 1 218 VAL 218 216 216 VAL VAL B . n B 1 219 GLN 219 217 217 GLN GLN B . n B 1 220 ILE 220 218 218 ILE ILE B . n B 1 221 ASP 221 219 219 ASP ASP B . n B 1 222 ARG 222 220 220 ARG ARG B . n B 1 223 PHE 223 221 221 PHE PHE B . n B 1 224 ILE 224 222 222 ILE ILE B . n B 1 225 ARG 225 223 223 ARG ARG B . n B 1 226 ALA 226 224 224 ALA ALA B . n B 1 227 MET 227 225 225 MET MET B . n B 1 228 PHE 228 226 226 PHE PHE B . n B 1 229 PHE 229 227 227 PHE PHE B . n B 1 230 PRO 230 228 228 PRO PRO B . n B 1 231 PRO 231 229 229 PRO PRO B . n B 1 232 PHE 232 230 230 PHE PHE B . n B 1 233 PRO 233 231 231 PRO PRO B . n B 1 234 PRO 234 232 232 PRO PRO B . n B 1 235 ALA 235 233 233 ALA ALA B . n B 1 236 VAL 236 234 234 VAL VAL B . n B 1 237 LEU 237 235 235 LEU LEU B . n B 1 238 LYS 238 236 236 LYS LYS B . n B 1 239 ILE 239 237 237 ILE ILE B . n B 1 240 ASP 240 238 238 ASP ASP B . n B 1 241 GLY 241 239 239 GLY GLY B . n B 1 242 LYS 242 240 240 LYS LYS B . n B 1 243 VAL 243 241 241 VAL VAL B . n B 1 244 TYR 244 242 242 TYR TYR B . n B 1 245 TYR 245 243 243 TYR TYR B . n B 1 246 VAL 246 244 244 VAL VAL B . n B 1 247 PRO 247 245 245 PRO PRO B . n B 1 248 SER 248 246 246 SER SER B . n B 1 249 ILE 249 247 ? ? ? B . n B 1 250 ASP 250 248 ? ? ? B . n B 1 251 ILE 251 249 ? ? ? B . n B 1 252 TYR 252 250 ? ? ? B . n B 1 253 ARG 253 251 ? ? ? B . n B 1 254 SER 254 252 ? ? ? B . n B 1 255 LEU 255 253 ? ? ? B . n B 1 256 MET 256 254 ? ? ? B . n B 1 257 ARG 257 255 ? ? ? B . n B 1 258 GLY 258 256 ? ? ? B . n B 1 259 ILE 259 257 ? ? ? B . n B 1 260 PRO 260 258 ? ? ? B . n B 1 261 SER 261 259 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1YJ 1 301 301 1YJ 1YJ A . D 3 EDO 1 302 1 EDO EDO A . E 4 GDP 1 303 1 GDP GDP A . F 2 1YJ 1 301 301 1YJ 1YJ B . G 4 GDP 1 302 2 GDP GDP B . H 5 GMP 1 303 3 GMP GDP B . I 6 HOH 1 401 491 HOH HOH A . I 6 HOH 2 402 107 HOH HOH A . I 6 HOH 3 403 36 HOH HOH A . I 6 HOH 4 404 116 HOH HOH A . I 6 HOH 5 405 336 HOH HOH A . I 6 HOH 6 406 424 HOH HOH A . I 6 HOH 7 407 9 HOH HOH A . I 6 HOH 8 408 181 HOH HOH A . I 6 HOH 9 409 493 HOH HOH A . I 6 HOH 10 410 174 HOH HOH A . I 6 HOH 11 411 102 HOH HOH A . I 6 HOH 12 412 113 HOH HOH A . I 6 HOH 13 413 481 HOH HOH A . I 6 HOH 14 414 182 HOH HOH A . I 6 HOH 15 415 452 HOH HOH A . I 6 HOH 16 416 5 HOH HOH A . I 6 HOH 17 417 177 HOH HOH A . I 6 HOH 18 418 229 HOH HOH A . I 6 HOH 19 419 23 HOH HOH A . I 6 HOH 20 420 259 HOH HOH A . I 6 HOH 21 421 211 HOH HOH A . I 6 HOH 22 422 212 HOH HOH A . I 6 HOH 23 423 148 HOH HOH A . I 6 HOH 24 424 300 HOH HOH A . I 6 HOH 25 425 339 HOH HOH A . I 6 HOH 26 426 105 HOH HOH A . I 6 HOH 27 427 122 HOH HOH A . I 6 HOH 28 428 464 HOH HOH A . I 6 HOH 29 429 408 HOH HOH A . I 6 HOH 30 430 170 HOH HOH A . I 6 HOH 31 431 461 HOH HOH A . I 6 HOH 32 432 152 HOH HOH A . I 6 HOH 33 433 46 HOH HOH A . I 6 HOH 34 434 126 HOH HOH A . I 6 HOH 35 435 111 HOH HOH A . I 6 HOH 36 436 477 HOH HOH A . I 6 HOH 37 437 224 HOH HOH A . I 6 HOH 38 438 166 HOH HOH A . I 6 HOH 39 439 157 HOH HOH A . I 6 HOH 40 440 256 HOH HOH A . I 6 HOH 41 441 118 HOH HOH A . I 6 HOH 42 442 28 HOH HOH A . I 6 HOH 43 443 119 HOH HOH A . I 6 HOH 44 444 8 HOH HOH A . I 6 HOH 45 445 445 HOH HOH A . I 6 HOH 46 446 14 HOH HOH A . I 6 HOH 47 447 147 HOH HOH A . I 6 HOH 48 448 394 HOH HOH A . I 6 HOH 49 449 162 HOH HOH A . I 6 HOH 50 450 130 HOH HOH A . I 6 HOH 51 451 112 HOH HOH A . I 6 HOH 52 452 15 HOH HOH A . I 6 HOH 53 453 353 HOH HOH A . I 6 HOH 54 454 176 HOH HOH A . I 6 HOH 55 455 16 HOH HOH A . I 6 HOH 56 456 450 HOH HOH A . I 6 HOH 57 457 377 HOH HOH A . I 6 HOH 58 458 280 HOH HOH A . I 6 HOH 59 459 43 HOH HOH A . I 6 HOH 60 460 124 HOH HOH A . I 6 HOH 61 461 199 HOH HOH A . I 6 HOH 62 462 108 HOH HOH A . I 6 HOH 63 463 1 HOH HOH A . I 6 HOH 64 464 230 HOH HOH A . I 6 HOH 65 465 399 HOH HOH A . I 6 HOH 66 466 3 HOH HOH A . I 6 HOH 67 467 227 HOH HOH A . I 6 HOH 68 468 291 HOH HOH A . I 6 HOH 69 469 449 HOH HOH A . I 6 HOH 70 470 490 HOH HOH A . I 6 HOH 71 471 110 HOH HOH A . I 6 HOH 72 472 446 HOH HOH A . I 6 HOH 73 473 276 HOH HOH A . I 6 HOH 74 474 172 HOH HOH A . I 6 HOH 75 475 42 HOH HOH A . I 6 HOH 76 476 26 HOH HOH A . I 6 HOH 77 477 158 HOH HOH A . I 6 HOH 78 478 298 HOH HOH A . I 6 HOH 79 479 99 HOH HOH A . I 6 HOH 80 480 453 HOH HOH A . I 6 HOH 81 481 35 HOH HOH A . I 6 HOH 82 482 25 HOH HOH A . I 6 HOH 83 483 97 HOH HOH A . I 6 HOH 84 484 106 HOH HOH A . I 6 HOH 85 485 21 HOH HOH A . I 6 HOH 86 486 12 HOH HOH A . I 6 HOH 87 487 498 HOH HOH A . I 6 HOH 88 488 234 HOH HOH A . I 6 HOH 89 489 150 HOH HOH A . I 6 HOH 90 490 218 HOH HOH A . I 6 HOH 91 491 17 HOH HOH A . I 6 HOH 92 492 231 HOH HOH A . I 6 HOH 93 493 104 HOH HOH A . I 6 HOH 94 494 164 HOH HOH A . I 6 HOH 95 495 33 HOH HOH A . I 6 HOH 96 496 454 HOH HOH A . I 6 HOH 97 497 257 HOH HOH A . I 6 HOH 98 498 295 HOH HOH A . I 6 HOH 99 499 159 HOH HOH A . I 6 HOH 100 500 210 HOH HOH A . I 6 HOH 101 501 153 HOH HOH A . I 6 HOH 102 502 24 HOH HOH A . I 6 HOH 103 503 232 HOH HOH A . I 6 HOH 104 504 233 HOH HOH A . I 6 HOH 105 505 32 HOH HOH A . I 6 HOH 106 506 448 HOH HOH A . I 6 HOH 107 507 494 HOH HOH A . I 6 HOH 108 508 296 HOH HOH A . I 6 HOH 109 509 462 HOH HOH A . I 6 HOH 110 510 217 HOH HOH A . I 6 HOH 111 511 495 HOH HOH A . I 6 HOH 112 512 381 HOH HOH A . I 6 HOH 113 513 418 HOH HOH A . I 6 HOH 114 514 415 HOH HOH A . I 6 HOH 115 515 497 HOH HOH A . I 6 HOH 116 516 422 HOH HOH A . I 6 HOH 117 517 478 HOH HOH A . I 6 HOH 118 518 297 HOH HOH A . I 6 HOH 119 519 447 HOH HOH A . J 6 HOH 1 401 55 HOH HOH B . J 6 HOH 2 402 483 HOH HOH B . J 6 HOH 3 403 460 HOH HOH B . J 6 HOH 4 404 416 HOH HOH B . J 6 HOH 5 405 285 HOH HOH B . J 6 HOH 6 406 474 HOH HOH B . J 6 HOH 7 407 374 HOH HOH B . J 6 HOH 8 408 83 HOH HOH B . J 6 HOH 9 409 68 HOH HOH B . J 6 HOH 10 410 70 HOH HOH B . J 6 HOH 11 411 128 HOH HOH B . J 6 HOH 12 412 482 HOH HOH B . J 6 HOH 13 413 76 HOH HOH B . J 6 HOH 14 414 49 HOH HOH B . J 6 HOH 15 415 129 HOH HOH B . J 6 HOH 16 416 370 HOH HOH B . J 6 HOH 17 417 441 HOH HOH B . J 6 HOH 18 418 362 HOH HOH B . J 6 HOH 19 419 18 HOH HOH B . J 6 HOH 20 420 62 HOH HOH B . J 6 HOH 21 421 144 HOH HOH B . J 6 HOH 22 422 346 HOH HOH B . J 6 HOH 23 423 57 HOH HOH B . J 6 HOH 24 424 420 HOH HOH B . J 6 HOH 25 425 48 HOH HOH B . J 6 HOH 26 426 270 HOH HOH B . J 6 HOH 27 427 331 HOH HOH B . J 6 HOH 28 428 50 HOH HOH B . J 6 HOH 29 429 444 HOH HOH B . J 6 HOH 30 430 455 HOH HOH B . J 6 HOH 31 431 442 HOH HOH B . J 6 HOH 32 432 499 HOH HOH B . J 6 HOH 33 433 239 HOH HOH B . J 6 HOH 34 434 86 HOH HOH B . J 6 HOH 35 435 137 HOH HOH B . J 6 HOH 36 436 20 HOH HOH B . J 6 HOH 37 437 66 HOH HOH B . J 6 HOH 38 438 463 HOH HOH B . J 6 HOH 39 439 80 HOH HOH B . J 6 HOH 40 440 434 HOH HOH B . J 6 HOH 41 441 85 HOH HOH B . J 6 HOH 42 442 131 HOH HOH B . J 6 HOH 43 443 456 HOH HOH B . J 6 HOH 44 444 138 HOH HOH B . J 6 HOH 45 445 433 HOH HOH B . J 6 HOH 46 446 487 HOH HOH B . J 6 HOH 47 447 265 HOH HOH B . J 6 HOH 48 448 127 HOH HOH B . J 6 HOH 49 449 173 HOH HOH B . J 6 HOH 50 450 74 HOH HOH B . J 6 HOH 51 451 37 HOH HOH B . J 6 HOH 52 452 109 HOH HOH B . J 6 HOH 53 453 100 HOH HOH B . J 6 HOH 54 454 342 HOH HOH B . J 6 HOH 55 455 54 HOH HOH B . J 6 HOH 56 456 430 HOH HOH B . J 6 HOH 57 457 6 HOH HOH B . J 6 HOH 58 458 432 HOH HOH B . J 6 HOH 59 459 82 HOH HOH B . J 6 HOH 60 460 286 HOH HOH B . J 6 HOH 61 461 101 HOH HOH B . J 6 HOH 62 462 73 HOH HOH B . J 6 HOH 63 463 160 HOH HOH B . J 6 HOH 64 464 65 HOH HOH B . J 6 HOH 65 465 409 HOH HOH B . J 6 HOH 66 466 40 HOH HOH B . J 6 HOH 67 467 133 HOH HOH B . J 6 HOH 68 468 56 HOH HOH B . J 6 HOH 69 469 69 HOH HOH B . J 6 HOH 70 470 473 HOH HOH B . J 6 HOH 71 471 471 HOH HOH B . J 6 HOH 72 472 184 HOH HOH B . J 6 HOH 73 473 488 HOH HOH B . J 6 HOH 74 474 436 HOH HOH B . J 6 HOH 75 475 38 HOH HOH B . J 6 HOH 76 476 317 HOH HOH B . J 6 HOH 77 477 192 HOH HOH B . J 6 HOH 78 478 61 HOH HOH B . J 6 HOH 79 479 443 HOH HOH B . J 6 HOH 80 480 469 HOH HOH B . J 6 HOH 81 481 351 HOH HOH B . J 6 HOH 82 482 88 HOH HOH B . J 6 HOH 83 483 53 HOH HOH B . J 6 HOH 84 484 175 HOH HOH B . J 6 HOH 85 485 466 HOH HOH B . J 6 HOH 86 486 451 HOH HOH B . J 6 HOH 87 487 293 HOH HOH B . J 6 HOH 88 488 288 HOH HOH B . J 6 HOH 89 489 412 HOH HOH B . J 6 HOH 90 490 238 HOH HOH B . J 6 HOH 91 491 79 HOH HOH B . J 6 HOH 92 492 496 HOH HOH B . J 6 HOH 93 493 345 HOH HOH B . J 6 HOH 94 494 371 HOH HOH B . J 6 HOH 95 495 316 HOH HOH B . J 6 HOH 96 496 52 HOH HOH B . J 6 HOH 97 497 440 HOH HOH B . J 6 HOH 98 498 81 HOH HOH B . J 6 HOH 99 499 4 HOH HOH B . J 6 HOH 100 500 458 HOH HOH B . J 6 HOH 101 501 437 HOH HOH B . J 6 HOH 102 502 467 HOH HOH B . J 6 HOH 103 503 151 HOH HOH B . J 6 HOH 104 504 142 HOH HOH B . J 6 HOH 105 505 228 HOH HOH B . J 6 HOH 106 506 343 HOH HOH B . J 6 HOH 107 507 39 HOH HOH B . J 6 HOH 108 508 375 HOH HOH B . J 6 HOH 109 509 51 HOH HOH B . J 6 HOH 110 510 431 HOH HOH B . J 6 HOH 111 511 87 HOH HOH B . J 6 HOH 112 512 486 HOH HOH B . J 6 HOH 113 513 167 HOH HOH B . J 6 HOH 114 514 479 HOH HOH B . J 6 HOH 115 515 489 HOH HOH B . J 6 HOH 116 516 426 HOH HOH B . J 6 HOH 117 517 429 HOH HOH B . J 6 HOH 118 518 332 HOH HOH B . J 6 HOH 119 519 262 HOH HOH B . J 6 HOH 120 520 306 HOH HOH B . J 6 HOH 121 521 484 HOH HOH B . J 6 HOH 122 522 459 HOH HOH B . J 6 HOH 123 523 279 HOH HOH B . J 6 HOH 124 524 411 HOH HOH B . J 6 HOH 125 525 492 HOH HOH B . J 6 HOH 126 526 475 HOH HOH B . J 6 HOH 127 527 485 HOH HOH B . J 6 HOH 128 528 472 HOH HOH B . J 6 HOH 129 529 77 HOH HOH B . J 6 HOH 130 530 423 HOH HOH B . J 6 HOH 131 531 435 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5170 ? 1 MORE -28 ? 1 'SSA (A^2)' 21270 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-07-05 2 'Structure model' 1 1 2017-07-26 3 'Structure model' 1 2 2017-09-20 4 'Structure model' 1 3 2020-01-01 5 'Structure model' 1 4 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_audit_support 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' refine_hist # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 3 'Structure model' '_pdbx_audit_support.funding_organization' 6 4 'Structure model' '_pdbx_audit_support.funding_organization' 7 5 'Structure model' '_database_2.pdbx_DOI' 8 5 'Structure model' '_database_2.pdbx_database_accession' 9 5 'Structure model' '_refine_hist.d_res_low' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0124 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? SAINT ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SADABS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 175 ? ? CZ A ARG 175 ? ? NH1 A ARG 175 ? ? 123.79 120.30 3.49 0.50 N 2 1 NE A ARG 223 ? ? CZ A ARG 223 ? ? NH2 A ARG 223 ? ? 123.52 120.30 3.22 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 78 ? ? 65.77 70.84 2 1 PRO A 108 ? ? -81.82 46.59 3 1 THR A 131 ? ? -137.04 -146.74 4 1 ASP A 139 ? ? -109.28 -164.10 5 1 GLU A 202 ? ? -30.19 120.06 6 1 PHE A 205 ? ? 56.42 19.75 7 1 ASP B 43 ? ? -127.37 -166.48 8 1 THR B 131 ? ? -132.82 -152.66 9 1 ASP B 139 ? ? -107.78 -160.56 10 1 PHE B 227 ? ? -162.27 84.59 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 1YJ 301 ? C9 ? C 1YJ 1 C9 2 1 N 1 A 1YJ 301 ? N10 ? C 1YJ 1 N10 3 1 N 1 A 1YJ 301 ? "C4'" ? C 1YJ 1 "C4'" 4 1 N 1 A 1YJ 301 ? "C3'" ? C 1YJ 1 "C3'" 5 1 N 1 A 1YJ 301 ? "C2'" ? C 1YJ 1 "C2'" 6 1 N 1 A 1YJ 301 ? "C1'" ? C 1YJ 1 "C1'" 7 1 N 1 A 1YJ 301 ? "C6'" ? C 1YJ 1 "C6'" 8 1 N 1 A 1YJ 301 ? "C5'" ? C 1YJ 1 "C5'" 9 1 N 1 A 1YJ 301 ? C11 ? C 1YJ 1 C11 10 1 N 1 A 1YJ 301 ? N ? C 1YJ 1 N 11 1 N 1 A 1YJ 301 ? CA ? C 1YJ 1 CA 12 1 N 1 A 1YJ 301 ? C ? C 1YJ 1 C 13 1 N 1 A 1YJ 301 ? OX2 ? C 1YJ 1 OX2 14 1 N 1 A 1YJ 301 ? OX1 ? C 1YJ 1 OX1 15 1 N 1 A 1YJ 301 ? CB ? C 1YJ 1 CB 16 1 N 1 A 1YJ 301 ? CG ? C 1YJ 1 CG 17 1 N 1 A 1YJ 301 ? CD ? C 1YJ 1 CD 18 1 N 1 A 1YJ 301 ? OE1 ? C 1YJ 1 OE1 19 1 N 1 A 1YJ 301 ? OE2 ? C 1YJ 1 OE2 20 1 N 1 A 1YJ 301 ? O11 ? C 1YJ 1 O11 21 1 N 1 B 1YJ 301 ? C9 ? F 1YJ 1 C9 22 1 N 1 B 1YJ 301 ? N10 ? F 1YJ 1 N10 23 1 N 1 B 1YJ 301 ? "C4'" ? F 1YJ 1 "C4'" 24 1 N 1 B 1YJ 301 ? "C3'" ? F 1YJ 1 "C3'" 25 1 N 1 B 1YJ 301 ? "C2'" ? F 1YJ 1 "C2'" 26 1 N 1 B 1YJ 301 ? "C1'" ? F 1YJ 1 "C1'" 27 1 N 1 B 1YJ 301 ? "C6'" ? F 1YJ 1 "C6'" 28 1 N 1 B 1YJ 301 ? "C5'" ? F 1YJ 1 "C5'" 29 1 N 1 B 1YJ 301 ? C11 ? F 1YJ 1 C11 30 1 N 1 B 1YJ 301 ? N ? F 1YJ 1 N 31 1 N 1 B 1YJ 301 ? CA ? F 1YJ 1 CA 32 1 N 1 B 1YJ 301 ? C ? F 1YJ 1 C 33 1 N 1 B 1YJ 301 ? OX2 ? F 1YJ 1 OX2 34 1 N 1 B 1YJ 301 ? OX1 ? F 1YJ 1 OX1 35 1 N 1 B 1YJ 301 ? CB ? F 1YJ 1 CB 36 1 N 1 B 1YJ 301 ? CG ? F 1YJ 1 CG 37 1 N 1 B 1YJ 301 ? CD ? F 1YJ 1 CD 38 1 N 1 B 1YJ 301 ? OE1 ? F 1YJ 1 OE1 39 1 N 1 B 1YJ 301 ? OE2 ? F 1YJ 1 OE2 40 1 N 1 B 1YJ 301 ? O11 ? F 1YJ 1 O11 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A HIS 0 ? A HIS 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A ILE 237 ? A ILE 239 5 1 Y 1 A ASP 238 ? A ASP 240 6 1 Y 1 A GLY 239 ? A GLY 241 7 1 Y 1 A LYS 240 ? A LYS 242 8 1 Y 1 A VAL 241 ? A VAL 243 9 1 Y 1 A ARG 255 ? A ARG 257 10 1 Y 1 A GLY 256 ? A GLY 258 11 1 Y 1 A ILE 257 ? A ILE 259 12 1 Y 1 A PRO 258 ? A PRO 260 13 1 Y 1 A SER 259 ? A SER 261 14 1 Y 1 B GLY -1 ? B GLY 1 15 1 Y 1 B HIS 0 ? B HIS 2 16 1 Y 1 B ILE 247 ? B ILE 249 17 1 Y 1 B ASP 248 ? B ASP 250 18 1 Y 1 B ILE 249 ? B ILE 251 19 1 Y 1 B TYR 250 ? B TYR 252 20 1 Y 1 B ARG 251 ? B ARG 253 21 1 Y 1 B SER 252 ? B SER 254 22 1 Y 1 B LEU 253 ? B LEU 255 23 1 Y 1 B MET 254 ? B MET 256 24 1 Y 1 B ARG 255 ? B ARG 257 25 1 Y 1 B GLY 256 ? B GLY 258 26 1 Y 1 B ILE 257 ? B ILE 259 27 1 Y 1 B PRO 258 ? B PRO 260 28 1 Y 1 B SER 259 ? B SER 261 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1YJ N3 N N N 1 1YJ C2 C N N 2 1YJ N1 N N N 3 1YJ C8A C N N 4 1YJ C4A C N N 5 1YJ C4 C N N 6 1YJ N8 N N N 7 1YJ C7 C N N 8 1YJ C6 C N R 9 1YJ N5 N N N 10 1YJ C9 C N N 11 1YJ N10 N N N 12 1YJ "C4'" C Y N 13 1YJ "C3'" C Y N 14 1YJ "C2'" C Y N 15 1YJ "C1'" C Y N 16 1YJ "C6'" C Y N 17 1YJ "C5'" C Y N 18 1YJ C11 C N N 19 1YJ N N N N 20 1YJ CA C N S 21 1YJ C C N N 22 1YJ OX2 O N N 23 1YJ OX1 O N N 24 1YJ CB C N N 25 1YJ CG C N N 26 1YJ CD C N N 27 1YJ OE1 O N N 28 1YJ OE2 O N N 29 1YJ O11 O N N 30 1YJ O4 O N N 31 1YJ N2 N N N 32 1YJ H3 H N N 33 1YJ H4 H N N 34 1YJ H5 H N N 35 1YJ H6 H N N 36 1YJ H8 H N N 37 1YJ H9 H N N 38 1YJ H10 H N N 39 1YJ H11 H N N 40 1YJ H12 H N N 41 1YJ H13 H N N 42 1YJ H14 H N N 43 1YJ H15 H N N 44 1YJ H16 H N N 45 1YJ H17 H N N 46 1YJ H18 H N N 47 1YJ H19 H N N 48 1YJ H20 H N N 49 1YJ H21 H N N 50 1YJ H22 H N N 51 1YJ H23 H N N 52 1YJ H1 H N N 53 1YJ H2 H N N 54 1YJ H7 H N N 55 ALA N N N N 56 ALA CA C N S 57 ALA C C N N 58 ALA O O N N 59 ALA CB C N N 60 ALA OXT O N N 61 ALA H H N N 62 ALA H2 H N N 63 ALA HA H N N 64 ALA HB1 H N N 65 ALA HB2 H N N 66 ALA HB3 H N N 67 ALA HXT H N N 68 ARG N N N N 69 ARG CA C N S 70 ARG C C N N 71 ARG O O N N 72 ARG CB C N N 73 ARG CG C N N 74 ARG CD C N N 75 ARG NE N N N 76 ARG CZ C N N 77 ARG NH1 N N N 78 ARG NH2 N N N 79 ARG OXT O N N 80 ARG H H N N 81 ARG H2 H N N 82 ARG HA H N N 83 ARG HB2 H N N 84 ARG HB3 H N N 85 ARG HG2 H N N 86 ARG HG3 H N N 87 ARG HD2 H N N 88 ARG HD3 H N N 89 ARG HE H N N 90 ARG HH11 H N N 91 ARG HH12 H N N 92 ARG HH21 H N N 93 ARG HH22 H N N 94 ARG HXT H N N 95 ASN N N N N 96 ASN CA C N S 97 ASN C C N N 98 ASN O O N N 99 ASN CB C N N 100 ASN CG C N N 101 ASN OD1 O N N 102 ASN ND2 N N N 103 ASN OXT O N N 104 ASN H H N N 105 ASN H2 H N N 106 ASN HA H N N 107 ASN HB2 H N N 108 ASN HB3 H N N 109 ASN HD21 H N N 110 ASN HD22 H N N 111 ASN HXT H N N 112 ASP N N N N 113 ASP CA C N S 114 ASP C C N N 115 ASP O O N N 116 ASP CB C N N 117 ASP CG C N N 118 ASP OD1 O N N 119 ASP OD2 O N N 120 ASP OXT O N N 121 ASP H H N N 122 ASP H2 H N N 123 ASP HA H N N 124 ASP HB2 H N N 125 ASP HB3 H N N 126 ASP HD2 H N N 127 ASP HXT H N N 128 CYS N N N N 129 CYS CA C N R 130 CYS C C N N 131 CYS O O N N 132 CYS CB C N N 133 CYS SG S N N 134 CYS OXT O N N 135 CYS H H N N 136 CYS H2 H N N 137 CYS HA H N N 138 CYS HB2 H N N 139 CYS HB3 H N N 140 CYS HG H N N 141 CYS HXT H N N 142 EDO C1 C N N 143 EDO O1 O N N 144 EDO C2 C N N 145 EDO O2 O N N 146 EDO H11 H N N 147 EDO H12 H N N 148 EDO HO1 H N N 149 EDO H21 H N N 150 EDO H22 H N N 151 EDO HO2 H N N 152 GDP PB P N N 153 GDP O1B O N N 154 GDP O2B O N N 155 GDP O3B O N N 156 GDP O3A O N N 157 GDP PA P N N 158 GDP O1A O N N 159 GDP O2A O N N 160 GDP "O5'" O N N 161 GDP "C5'" C N N 162 GDP "C4'" C N R 163 GDP "O4'" O N N 164 GDP "C3'" C N S 165 GDP "O3'" O N N 166 GDP "C2'" C N R 167 GDP "O2'" O N N 168 GDP "C1'" C N R 169 GDP N9 N Y N 170 GDP C8 C Y N 171 GDP N7 N Y N 172 GDP C5 C Y N 173 GDP C6 C N N 174 GDP O6 O N N 175 GDP N1 N N N 176 GDP C2 C N N 177 GDP N2 N N N 178 GDP N3 N N N 179 GDP C4 C Y N 180 GDP HOB2 H N N 181 GDP HOB3 H N N 182 GDP HOA2 H N N 183 GDP "H5'" H N N 184 GDP "H5''" H N N 185 GDP "H4'" H N N 186 GDP "H3'" H N N 187 GDP "HO3'" H N N 188 GDP "H2'" H N N 189 GDP "HO2'" H N N 190 GDP "H1'" H N N 191 GDP H8 H N N 192 GDP HN1 H N N 193 GDP HN21 H N N 194 GDP HN22 H N N 195 GLN N N N N 196 GLN CA C N S 197 GLN C C N N 198 GLN O O N N 199 GLN CB C N N 200 GLN CG C N N 201 GLN CD C N N 202 GLN OE1 O N N 203 GLN NE2 N N N 204 GLN OXT O N N 205 GLN H H N N 206 GLN H2 H N N 207 GLN HA H N N 208 GLN HB2 H N N 209 GLN HB3 H N N 210 GLN HG2 H N N 211 GLN HG3 H N N 212 GLN HE21 H N N 213 GLN HE22 H N N 214 GLN HXT H N N 215 GLU N N N N 216 GLU CA C N S 217 GLU C C N N 218 GLU O O N N 219 GLU CB C N N 220 GLU CG C N N 221 GLU CD C N N 222 GLU OE1 O N N 223 GLU OE2 O N N 224 GLU OXT O N N 225 GLU H H N N 226 GLU H2 H N N 227 GLU HA H N N 228 GLU HB2 H N N 229 GLU HB3 H N N 230 GLU HG2 H N N 231 GLU HG3 H N N 232 GLU HE2 H N N 233 GLU HXT H N N 234 GLY N N N N 235 GLY CA C N N 236 GLY C C N N 237 GLY O O N N 238 GLY OXT O N N 239 GLY H H N N 240 GLY H2 H N N 241 GLY HA2 H N N 242 GLY HA3 H N N 243 GLY HXT H N N 244 GMP "O5'" O N N 245 GMP "C5'" C N N 246 GMP "C4'" C N R 247 GMP "O4'" O N N 248 GMP "C3'" C N S 249 GMP "O3'" O N N 250 GMP "C2'" C N R 251 GMP "O2'" O N N 252 GMP "C1'" C N R 253 GMP N9 N Y N 254 GMP C8 C Y N 255 GMP N7 N Y N 256 GMP C5 C Y N 257 GMP C6 C N N 258 GMP O6 O N N 259 GMP N1 N N N 260 GMP C2 C N N 261 GMP N2 N N N 262 GMP N3 N N N 263 GMP C4 C Y N 264 GMP "HO5'" H N N 265 GMP "H5'1" H N N 266 GMP "H5'2" H N N 267 GMP "H4'" H N N 268 GMP "H3'" H N N 269 GMP "HO3'" H N N 270 GMP "H2'" H N N 271 GMP "HO2'" H N N 272 GMP "H1'" H N N 273 GMP H8 H N N 274 GMP HN1 H N N 275 GMP HN21 H N N 276 GMP HN22 H N N 277 HIS N N N N 278 HIS CA C N S 279 HIS C C N N 280 HIS O O N N 281 HIS CB C N N 282 HIS CG C Y N 283 HIS ND1 N Y N 284 HIS CD2 C Y N 285 HIS CE1 C Y N 286 HIS NE2 N Y N 287 HIS OXT O N N 288 HIS H H N N 289 HIS H2 H N N 290 HIS HA H N N 291 HIS HB2 H N N 292 HIS HB3 H N N 293 HIS HD1 H N N 294 HIS HD2 H N N 295 HIS HE1 H N N 296 HIS HE2 H N N 297 HIS HXT H N N 298 HOH O O N N 299 HOH H1 H N N 300 HOH H2 H N N 301 ILE N N N N 302 ILE CA C N S 303 ILE C C N N 304 ILE O O N N 305 ILE CB C N S 306 ILE CG1 C N N 307 ILE CG2 C N N 308 ILE CD1 C N N 309 ILE OXT O N N 310 ILE H H N N 311 ILE H2 H N N 312 ILE HA H N N 313 ILE HB H N N 314 ILE HG12 H N N 315 ILE HG13 H N N 316 ILE HG21 H N N 317 ILE HG22 H N N 318 ILE HG23 H N N 319 ILE HD11 H N N 320 ILE HD12 H N N 321 ILE HD13 H N N 322 ILE HXT H N N 323 LEU N N N N 324 LEU CA C N S 325 LEU C C N N 326 LEU O O N N 327 LEU CB C N N 328 LEU CG C N N 329 LEU CD1 C N N 330 LEU CD2 C N N 331 LEU OXT O N N 332 LEU H H N N 333 LEU H2 H N N 334 LEU HA H N N 335 LEU HB2 H N N 336 LEU HB3 H N N 337 LEU HG H N N 338 LEU HD11 H N N 339 LEU HD12 H N N 340 LEU HD13 H N N 341 LEU HD21 H N N 342 LEU HD22 H N N 343 LEU HD23 H N N 344 LEU HXT H N N 345 LYS N N N N 346 LYS CA C N S 347 LYS C C N N 348 LYS O O N N 349 LYS CB C N N 350 LYS CG C N N 351 LYS CD C N N 352 LYS CE C N N 353 LYS NZ N N N 354 LYS OXT O N N 355 LYS H H N N 356 LYS H2 H N N 357 LYS HA H N N 358 LYS HB2 H N N 359 LYS HB3 H N N 360 LYS HG2 H N N 361 LYS HG3 H N N 362 LYS HD2 H N N 363 LYS HD3 H N N 364 LYS HE2 H N N 365 LYS HE3 H N N 366 LYS HZ1 H N N 367 LYS HZ2 H N N 368 LYS HZ3 H N N 369 LYS HXT H N N 370 MET N N N N 371 MET CA C N S 372 MET C C N N 373 MET O O N N 374 MET CB C N N 375 MET CG C N N 376 MET SD S N N 377 MET CE C N N 378 MET OXT O N N 379 MET H H N N 380 MET H2 H N N 381 MET HA H N N 382 MET HB2 H N N 383 MET HB3 H N N 384 MET HG2 H N N 385 MET HG3 H N N 386 MET HE1 H N N 387 MET HE2 H N N 388 MET HE3 H N N 389 MET HXT H N N 390 PHE N N N N 391 PHE CA C N S 392 PHE C C N N 393 PHE O O N N 394 PHE CB C N N 395 PHE CG C Y N 396 PHE CD1 C Y N 397 PHE CD2 C Y N 398 PHE CE1 C Y N 399 PHE CE2 C Y N 400 PHE CZ C Y N 401 PHE OXT O N N 402 PHE H H N N 403 PHE H2 H N N 404 PHE HA H N N 405 PHE HB2 H N N 406 PHE HB3 H N N 407 PHE HD1 H N N 408 PHE HD2 H N N 409 PHE HE1 H N N 410 PHE HE2 H N N 411 PHE HZ H N N 412 PHE HXT H N N 413 PRO N N N N 414 PRO CA C N S 415 PRO C C N N 416 PRO O O N N 417 PRO CB C N N 418 PRO CG C N N 419 PRO CD C N N 420 PRO OXT O N N 421 PRO H H N N 422 PRO HA H N N 423 PRO HB2 H N N 424 PRO HB3 H N N 425 PRO HG2 H N N 426 PRO HG3 H N N 427 PRO HD2 H N N 428 PRO HD3 H N N 429 PRO HXT H N N 430 SER N N N N 431 SER CA C N S 432 SER C C N N 433 SER O O N N 434 SER CB C N N 435 SER OG O N N 436 SER OXT O N N 437 SER H H N N 438 SER H2 H N N 439 SER HA H N N 440 SER HB2 H N N 441 SER HB3 H N N 442 SER HG H N N 443 SER HXT H N N 444 THR N N N N 445 THR CA C N S 446 THR C C N N 447 THR O O N N 448 THR CB C N R 449 THR OG1 O N N 450 THR CG2 C N N 451 THR OXT O N N 452 THR H H N N 453 THR H2 H N N 454 THR HA H N N 455 THR HB H N N 456 THR HG1 H N N 457 THR HG21 H N N 458 THR HG22 H N N 459 THR HG23 H N N 460 THR HXT H N N 461 TRP N N N N 462 TRP CA C N S 463 TRP C C N N 464 TRP O O N N 465 TRP CB C N N 466 TRP CG C Y N 467 TRP CD1 C Y N 468 TRP CD2 C Y N 469 TRP NE1 N Y N 470 TRP CE2 C Y N 471 TRP CE3 C Y N 472 TRP CZ2 C Y N 473 TRP CZ3 C Y N 474 TRP CH2 C Y N 475 TRP OXT O N N 476 TRP H H N N 477 TRP H2 H N N 478 TRP HA H N N 479 TRP HB2 H N N 480 TRP HB3 H N N 481 TRP HD1 H N N 482 TRP HE1 H N N 483 TRP HE3 H N N 484 TRP HZ2 H N N 485 TRP HZ3 H N N 486 TRP HH2 H N N 487 TRP HXT H N N 488 TYR N N N N 489 TYR CA C N S 490 TYR C C N N 491 TYR O O N N 492 TYR CB C N N 493 TYR CG C Y N 494 TYR CD1 C Y N 495 TYR CD2 C Y N 496 TYR CE1 C Y N 497 TYR CE2 C Y N 498 TYR CZ C Y N 499 TYR OH O N N 500 TYR OXT O N N 501 TYR H H N N 502 TYR H2 H N N 503 TYR HA H N N 504 TYR HB2 H N N 505 TYR HB3 H N N 506 TYR HD1 H N N 507 TYR HD2 H N N 508 TYR HE1 H N N 509 TYR HE2 H N N 510 TYR HH H N N 511 TYR HXT H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1YJ C7 N8 sing N N 1 1YJ C7 C6 sing N N 2 1YJ N8 C8A sing N N 3 1YJ C6 N5 sing N N 4 1YJ C6 C9 sing N N 5 1YJ N10 C9 sing N N 6 1YJ N10 "C4'" sing N N 7 1YJ "C3'" "C4'" doub Y N 8 1YJ "C3'" "C2'" sing Y N 9 1YJ C8A C4A doub N N 10 1YJ C8A N1 sing N N 11 1YJ N5 C4A sing N N 12 1YJ "C4'" "C5'" sing Y N 13 1YJ C4A C4 sing N N 14 1YJ N1 C2 doub N N 15 1YJ "C2'" "C1'" doub Y N 16 1YJ C2 N3 sing N N 17 1YJ C2 N2 sing N N 18 1YJ C4 N3 sing N N 19 1YJ C4 O4 doub N N 20 1YJ "C5'" "C6'" doub Y N 21 1YJ "C1'" "C6'" sing Y N 22 1YJ "C1'" C11 sing N N 23 1YJ O11 C11 doub N N 24 1YJ C11 N sing N N 25 1YJ N CA sing N N 26 1YJ CA C sing N N 27 1YJ CA CB sing N N 28 1YJ C OX1 doub N N 29 1YJ C OX2 sing N N 30 1YJ CG CB sing N N 31 1YJ CG CD sing N N 32 1YJ OE1 CD doub N N 33 1YJ CD OE2 sing N N 34 1YJ C7 H3 sing N N 35 1YJ C7 H4 sing N N 36 1YJ C6 H5 sing N N 37 1YJ N5 H6 sing N N 38 1YJ C9 H8 sing N N 39 1YJ "C3'" H9 sing N N 40 1YJ "C2'" H10 sing N N 41 1YJ "C6'" H11 sing N N 42 1YJ "C5'" H12 sing N N 43 1YJ N H13 sing N N 44 1YJ CA H14 sing N N 45 1YJ OX2 H15 sing N N 46 1YJ CB H16 sing N N 47 1YJ CB H17 sing N N 48 1YJ CG H18 sing N N 49 1YJ CG H19 sing N N 50 1YJ OE2 H20 sing N N 51 1YJ N2 H21 sing N N 52 1YJ N2 H22 sing N N 53 1YJ N3 H23 sing N N 54 1YJ N8 H1 sing N N 55 1YJ C9 H2 sing N N 56 1YJ N10 H7 sing N N 57 ALA N CA sing N N 58 ALA N H sing N N 59 ALA N H2 sing N N 60 ALA CA C sing N N 61 ALA CA CB sing N N 62 ALA CA HA sing N N 63 ALA C O doub N N 64 ALA C OXT sing N N 65 ALA CB HB1 sing N N 66 ALA CB HB2 sing N N 67 ALA CB HB3 sing N N 68 ALA OXT HXT sing N N 69 ARG N CA sing N N 70 ARG N H sing N N 71 ARG N H2 sing N N 72 ARG CA C sing N N 73 ARG CA CB sing N N 74 ARG CA HA sing N N 75 ARG C O doub N N 76 ARG C OXT sing N N 77 ARG CB CG sing N N 78 ARG CB HB2 sing N N 79 ARG CB HB3 sing N N 80 ARG CG CD sing N N 81 ARG CG HG2 sing N N 82 ARG CG HG3 sing N N 83 ARG CD NE sing N N 84 ARG CD HD2 sing N N 85 ARG CD HD3 sing N N 86 ARG NE CZ sing N N 87 ARG NE HE sing N N 88 ARG CZ NH1 sing N N 89 ARG CZ NH2 doub N N 90 ARG NH1 HH11 sing N N 91 ARG NH1 HH12 sing N N 92 ARG NH2 HH21 sing N N 93 ARG NH2 HH22 sing N N 94 ARG OXT HXT sing N N 95 ASN N CA sing N N 96 ASN N H sing N N 97 ASN N H2 sing N N 98 ASN CA C sing N N 99 ASN CA CB sing N N 100 ASN CA HA sing N N 101 ASN C O doub N N 102 ASN C OXT sing N N 103 ASN CB CG sing N N 104 ASN CB HB2 sing N N 105 ASN CB HB3 sing N N 106 ASN CG OD1 doub N N 107 ASN CG ND2 sing N N 108 ASN ND2 HD21 sing N N 109 ASN ND2 HD22 sing N N 110 ASN OXT HXT sing N N 111 ASP N CA sing N N 112 ASP N H sing N N 113 ASP N H2 sing N N 114 ASP CA C sing N N 115 ASP CA CB sing N N 116 ASP CA HA sing N N 117 ASP C O doub N N 118 ASP C OXT sing N N 119 ASP CB CG sing N N 120 ASP CB HB2 sing N N 121 ASP CB HB3 sing N N 122 ASP CG OD1 doub N N 123 ASP CG OD2 sing N N 124 ASP OD2 HD2 sing N N 125 ASP OXT HXT sing N N 126 CYS N CA sing N N 127 CYS N H sing N N 128 CYS N H2 sing N N 129 CYS CA C sing N N 130 CYS CA CB sing N N 131 CYS CA HA sing N N 132 CYS C O doub N N 133 CYS C OXT sing N N 134 CYS CB SG sing N N 135 CYS CB HB2 sing N N 136 CYS CB HB3 sing N N 137 CYS SG HG sing N N 138 CYS OXT HXT sing N N 139 EDO C1 O1 sing N N 140 EDO C1 C2 sing N N 141 EDO C1 H11 sing N N 142 EDO C1 H12 sing N N 143 EDO O1 HO1 sing N N 144 EDO C2 O2 sing N N 145 EDO C2 H21 sing N N 146 EDO C2 H22 sing N N 147 EDO O2 HO2 sing N N 148 GDP PB O1B doub N N 149 GDP PB O2B sing N N 150 GDP PB O3B sing N N 151 GDP PB O3A sing N N 152 GDP O2B HOB2 sing N N 153 GDP O3B HOB3 sing N N 154 GDP O3A PA sing N N 155 GDP PA O1A doub N N 156 GDP PA O2A sing N N 157 GDP PA "O5'" sing N N 158 GDP O2A HOA2 sing N N 159 GDP "O5'" "C5'" sing N N 160 GDP "C5'" "C4'" sing N N 161 GDP "C5'" "H5'" sing N N 162 GDP "C5'" "H5''" sing N N 163 GDP "C4'" "O4'" sing N N 164 GDP "C4'" "C3'" sing N N 165 GDP "C4'" "H4'" sing N N 166 GDP "O4'" "C1'" sing N N 167 GDP "C3'" "O3'" sing N N 168 GDP "C3'" "C2'" sing N N 169 GDP "C3'" "H3'" sing N N 170 GDP "O3'" "HO3'" sing N N 171 GDP "C2'" "O2'" sing N N 172 GDP "C2'" "C1'" sing N N 173 GDP "C2'" "H2'" sing N N 174 GDP "O2'" "HO2'" sing N N 175 GDP "C1'" N9 sing N N 176 GDP "C1'" "H1'" sing N N 177 GDP N9 C8 sing Y N 178 GDP N9 C4 sing Y N 179 GDP C8 N7 doub Y N 180 GDP C8 H8 sing N N 181 GDP N7 C5 sing Y N 182 GDP C5 C6 sing N N 183 GDP C5 C4 doub Y N 184 GDP C6 O6 doub N N 185 GDP C6 N1 sing N N 186 GDP N1 C2 sing N N 187 GDP N1 HN1 sing N N 188 GDP C2 N2 sing N N 189 GDP C2 N3 doub N N 190 GDP N2 HN21 sing N N 191 GDP N2 HN22 sing N N 192 GDP N3 C4 sing N N 193 GLN N CA sing N N 194 GLN N H sing N N 195 GLN N H2 sing N N 196 GLN CA C sing N N 197 GLN CA CB sing N N 198 GLN CA HA sing N N 199 GLN C O doub N N 200 GLN C OXT sing N N 201 GLN CB CG sing N N 202 GLN CB HB2 sing N N 203 GLN CB HB3 sing N N 204 GLN CG CD sing N N 205 GLN CG HG2 sing N N 206 GLN CG HG3 sing N N 207 GLN CD OE1 doub N N 208 GLN CD NE2 sing N N 209 GLN NE2 HE21 sing N N 210 GLN NE2 HE22 sing N N 211 GLN OXT HXT sing N N 212 GLU N CA sing N N 213 GLU N H sing N N 214 GLU N H2 sing N N 215 GLU CA C sing N N 216 GLU CA CB sing N N 217 GLU CA HA sing N N 218 GLU C O doub N N 219 GLU C OXT sing N N 220 GLU CB CG sing N N 221 GLU CB HB2 sing N N 222 GLU CB HB3 sing N N 223 GLU CG CD sing N N 224 GLU CG HG2 sing N N 225 GLU CG HG3 sing N N 226 GLU CD OE1 doub N N 227 GLU CD OE2 sing N N 228 GLU OE2 HE2 sing N N 229 GLU OXT HXT sing N N 230 GLY N CA sing N N 231 GLY N H sing N N 232 GLY N H2 sing N N 233 GLY CA C sing N N 234 GLY CA HA2 sing N N 235 GLY CA HA3 sing N N 236 GLY C O doub N N 237 GLY C OXT sing N N 238 GLY OXT HXT sing N N 239 GMP "O5'" "C5'" sing N N 240 GMP "O5'" "HO5'" sing N N 241 GMP "C5'" "C4'" sing N N 242 GMP "C5'" "H5'1" sing N N 243 GMP "C5'" "H5'2" sing N N 244 GMP "C4'" "O4'" sing N N 245 GMP "C4'" "C3'" sing N N 246 GMP "C4'" "H4'" sing N N 247 GMP "O4'" "C1'" sing N N 248 GMP "C3'" "O3'" sing N N 249 GMP "C3'" "C2'" sing N N 250 GMP "C3'" "H3'" sing N N 251 GMP "O3'" "HO3'" sing N N 252 GMP "C2'" "O2'" sing N N 253 GMP "C2'" "C1'" sing N N 254 GMP "C2'" "H2'" sing N N 255 GMP "O2'" "HO2'" sing N N 256 GMP "C1'" N9 sing N N 257 GMP "C1'" "H1'" sing N N 258 GMP N9 C8 sing Y N 259 GMP N9 C4 sing Y N 260 GMP C8 N7 doub Y N 261 GMP C8 H8 sing N N 262 GMP N7 C5 sing Y N 263 GMP C5 C6 sing N N 264 GMP C5 C4 doub Y N 265 GMP C6 O6 doub N N 266 GMP C6 N1 sing N N 267 GMP N1 C2 sing N N 268 GMP N1 HN1 sing N N 269 GMP C2 N2 sing N N 270 GMP C2 N3 doub N N 271 GMP N2 HN21 sing N N 272 GMP N2 HN22 sing N N 273 GMP N3 C4 sing N N 274 HIS N CA sing N N 275 HIS N H sing N N 276 HIS N H2 sing N N 277 HIS CA C sing N N 278 HIS CA CB sing N N 279 HIS CA HA sing N N 280 HIS C O doub N N 281 HIS C OXT sing N N 282 HIS CB CG sing N N 283 HIS CB HB2 sing N N 284 HIS CB HB3 sing N N 285 HIS CG ND1 sing Y N 286 HIS CG CD2 doub Y N 287 HIS ND1 CE1 doub Y N 288 HIS ND1 HD1 sing N N 289 HIS CD2 NE2 sing Y N 290 HIS CD2 HD2 sing N N 291 HIS CE1 NE2 sing Y N 292 HIS CE1 HE1 sing N N 293 HIS NE2 HE2 sing N N 294 HIS OXT HXT sing N N 295 HOH O H1 sing N N 296 HOH O H2 sing N N 297 ILE N CA sing N N 298 ILE N H sing N N 299 ILE N H2 sing N N 300 ILE CA C sing N N 301 ILE CA CB sing N N 302 ILE CA HA sing N N 303 ILE C O doub N N 304 ILE C OXT sing N N 305 ILE CB CG1 sing N N 306 ILE CB CG2 sing N N 307 ILE CB HB sing N N 308 ILE CG1 CD1 sing N N 309 ILE CG1 HG12 sing N N 310 ILE CG1 HG13 sing N N 311 ILE CG2 HG21 sing N N 312 ILE CG2 HG22 sing N N 313 ILE CG2 HG23 sing N N 314 ILE CD1 HD11 sing N N 315 ILE CD1 HD12 sing N N 316 ILE CD1 HD13 sing N N 317 ILE OXT HXT sing N N 318 LEU N CA sing N N 319 LEU N H sing N N 320 LEU N H2 sing N N 321 LEU CA C sing N N 322 LEU CA CB sing N N 323 LEU CA HA sing N N 324 LEU C O doub N N 325 LEU C OXT sing N N 326 LEU CB CG sing N N 327 LEU CB HB2 sing N N 328 LEU CB HB3 sing N N 329 LEU CG CD1 sing N N 330 LEU CG CD2 sing N N 331 LEU CG HG sing N N 332 LEU CD1 HD11 sing N N 333 LEU CD1 HD12 sing N N 334 LEU CD1 HD13 sing N N 335 LEU CD2 HD21 sing N N 336 LEU CD2 HD22 sing N N 337 LEU CD2 HD23 sing N N 338 LEU OXT HXT sing N N 339 LYS N CA sing N N 340 LYS N H sing N N 341 LYS N H2 sing N N 342 LYS CA C sing N N 343 LYS CA CB sing N N 344 LYS CA HA sing N N 345 LYS C O doub N N 346 LYS C OXT sing N N 347 LYS CB CG sing N N 348 LYS CB HB2 sing N N 349 LYS CB HB3 sing N N 350 LYS CG CD sing N N 351 LYS CG HG2 sing N N 352 LYS CG HG3 sing N N 353 LYS CD CE sing N N 354 LYS CD HD2 sing N N 355 LYS CD HD3 sing N N 356 LYS CE NZ sing N N 357 LYS CE HE2 sing N N 358 LYS CE HE3 sing N N 359 LYS NZ HZ1 sing N N 360 LYS NZ HZ2 sing N N 361 LYS NZ HZ3 sing N N 362 LYS OXT HXT sing N N 363 MET N CA sing N N 364 MET N H sing N N 365 MET N H2 sing N N 366 MET CA C sing N N 367 MET CA CB sing N N 368 MET CA HA sing N N 369 MET C O doub N N 370 MET C OXT sing N N 371 MET CB CG sing N N 372 MET CB HB2 sing N N 373 MET CB HB3 sing N N 374 MET CG SD sing N N 375 MET CG HG2 sing N N 376 MET CG HG3 sing N N 377 MET SD CE sing N N 378 MET CE HE1 sing N N 379 MET CE HE2 sing N N 380 MET CE HE3 sing N N 381 MET OXT HXT sing N N 382 PHE N CA sing N N 383 PHE N H sing N N 384 PHE N H2 sing N N 385 PHE CA C sing N N 386 PHE CA CB sing N N 387 PHE CA HA sing N N 388 PHE C O doub N N 389 PHE C OXT sing N N 390 PHE CB CG sing N N 391 PHE CB HB2 sing N N 392 PHE CB HB3 sing N N 393 PHE CG CD1 doub Y N 394 PHE CG CD2 sing Y N 395 PHE CD1 CE1 sing Y N 396 PHE CD1 HD1 sing N N 397 PHE CD2 CE2 doub Y N 398 PHE CD2 HD2 sing N N 399 PHE CE1 CZ doub Y N 400 PHE CE1 HE1 sing N N 401 PHE CE2 CZ sing Y N 402 PHE CE2 HE2 sing N N 403 PHE CZ HZ sing N N 404 PHE OXT HXT sing N N 405 PRO N CA sing N N 406 PRO N CD sing N N 407 PRO N H sing N N 408 PRO CA C sing N N 409 PRO CA CB sing N N 410 PRO CA HA sing N N 411 PRO C O doub N N 412 PRO C OXT sing N N 413 PRO CB CG sing N N 414 PRO CB HB2 sing N N 415 PRO CB HB3 sing N N 416 PRO CG CD sing N N 417 PRO CG HG2 sing N N 418 PRO CG HG3 sing N N 419 PRO CD HD2 sing N N 420 PRO CD HD3 sing N N 421 PRO OXT HXT sing N N 422 SER N CA sing N N 423 SER N H sing N N 424 SER N H2 sing N N 425 SER CA C sing N N 426 SER CA CB sing N N 427 SER CA HA sing N N 428 SER C O doub N N 429 SER C OXT sing N N 430 SER CB OG sing N N 431 SER CB HB2 sing N N 432 SER CB HB3 sing N N 433 SER OG HG sing N N 434 SER OXT HXT sing N N 435 THR N CA sing N N 436 THR N H sing N N 437 THR N H2 sing N N 438 THR CA C sing N N 439 THR CA CB sing N N 440 THR CA HA sing N N 441 THR C O doub N N 442 THR C OXT sing N N 443 THR CB OG1 sing N N 444 THR CB CG2 sing N N 445 THR CB HB sing N N 446 THR OG1 HG1 sing N N 447 THR CG2 HG21 sing N N 448 THR CG2 HG22 sing N N 449 THR CG2 HG23 sing N N 450 THR OXT HXT sing N N 451 TRP N CA sing N N 452 TRP N H sing N N 453 TRP N H2 sing N N 454 TRP CA C sing N N 455 TRP CA CB sing N N 456 TRP CA HA sing N N 457 TRP C O doub N N 458 TRP C OXT sing N N 459 TRP CB CG sing N N 460 TRP CB HB2 sing N N 461 TRP CB HB3 sing N N 462 TRP CG CD1 doub Y N 463 TRP CG CD2 sing Y N 464 TRP CD1 NE1 sing Y N 465 TRP CD1 HD1 sing N N 466 TRP CD2 CE2 doub Y N 467 TRP CD2 CE3 sing Y N 468 TRP NE1 CE2 sing Y N 469 TRP NE1 HE1 sing N N 470 TRP CE2 CZ2 sing Y N 471 TRP CE3 CZ3 doub Y N 472 TRP CE3 HE3 sing N N 473 TRP CZ2 CH2 doub Y N 474 TRP CZ2 HZ2 sing N N 475 TRP CZ3 CH2 sing Y N 476 TRP CZ3 HZ3 sing N N 477 TRP CH2 HH2 sing N N 478 TRP OXT HXT sing N N 479 TYR N CA sing N N 480 TYR N H sing N N 481 TYR N H2 sing N N 482 TYR CA C sing N N 483 TYR CA CB sing N N 484 TYR CA HA sing N N 485 TYR C O doub N N 486 TYR C OXT sing N N 487 TYR CB CG sing N N 488 TYR CB HB2 sing N N 489 TYR CB HB3 sing N N 490 TYR CG CD1 doub Y N 491 TYR CG CD2 sing Y N 492 TYR CD1 CE1 sing Y N 493 TYR CD1 HD1 sing N N 494 TYR CD2 CE2 doub Y N 495 TYR CD2 HD2 sing N N 496 TYR CE1 CZ doub Y N 497 TYR CE1 HE1 sing N N 498 TYR CE2 CZ sing Y N 499 TYR CE2 HE2 sing N N 500 TYR CZ OH sing N N 501 TYR OH HH sing N N 502 TYR OXT HXT sing N N 503 VAL N CA sing N N 504 VAL N H sing N N 505 VAL N H2 sing N N 506 VAL CA C sing N N 507 VAL CA CB sing N N 508 VAL CA HA sing N N 509 VAL C O doub N N 510 VAL C OXT sing N N 511 VAL CB CG1 sing N N 512 VAL CB CG2 sing N N 513 VAL CB HB sing N N 514 VAL CG1 HG11 sing N N 515 VAL CG1 HG12 sing N N 516 VAL CG1 HG13 sing N N 517 VAL CG2 HG21 sing N N 518 VAL CG2 HG22 sing N N 519 VAL CG2 HG23 sing N N 520 VAL OXT HXT sing N N 521 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM115921 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-[4-({[(6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid' 1YJ 3 1,2-ETHANEDIOL EDO 4 "GUANOSINE-5'-DIPHOSPHATE" GDP 5 GUANOSINE GMP 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5VYR _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #