HEADER UNKNOWN FUNCTION 26-MAY-17 5VYV TITLE CRYSTAL STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION YCEH/ECK1052 TITLE 2 INVOLVED IN MEMBRANE BIOGENESIS FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0502 PROTEIN YCEH; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O157:H7; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 GENE: YCEH, Z1704, ECS1445; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS UNKNOWN FUNCTION, MEMBRANE BIOGENESIS, ALPHA/BETA PROTEIN, STRUCTURAL KEYWDS 2 GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, KEYWDS 3 CSGID, NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, NIAID EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,T.SKARINA,C.MCCHESNEY,A.SAVCHENKO,W.F.ANDERSON,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 04-OCT-23 5VYV 1 REMARK REVDAT 3 11-DEC-19 5VYV 1 REMARK REVDAT 2 20-SEP-17 5VYV 1 REMARK REVDAT 1 07-JUN-17 5VYV 0 JRNL AUTH P.J.STOGIOS JRNL TITL CRYSTAL STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION JRNL TITL 2 YCEH/ECK1052 INVOLVED IN MEMBRANE BIOGENESIS FROM JRNL TITL 3 ESCHERICHIA COLI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2733: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 11455 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 574 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.8193 - 3.9267 1.00 2755 146 0.1723 0.2310 REMARK 3 2 3.9267 - 3.1179 1.00 2738 145 0.2005 0.2639 REMARK 3 3 3.1179 - 2.7242 1.00 2711 143 0.2577 0.3098 REMARK 3 4 2.7242 - 2.4752 0.98 2677 140 0.3033 0.3660 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2815 REMARK 3 ANGLE : 0.610 3798 REMARK 3 CHIRALITY : 0.040 428 REMARK 3 PLANARITY : 0.003 502 REMARK 3 DIHEDRAL : 25.744 1107 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:7) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1470 3.9017 53.8849 REMARK 3 T TENSOR REMARK 3 T11: 0.5558 T22: 0.7728 REMARK 3 T33: 0.2673 T12: 0.1361 REMARK 3 T13: 0.0570 T23: 0.0597 REMARK 3 L TENSOR REMARK 3 L11: 3.0413 L22: 8.0724 REMARK 3 L33: 9.0111 L12: -1.5851 REMARK 3 L13: -1.1573 L23: 1.7672 REMARK 3 S TENSOR REMARK 3 S11: 0.7386 S12: 1.4843 S13: 1.0078 REMARK 3 S21: -0.7327 S22: -0.1478 S23: -1.1399 REMARK 3 S31: -0.4045 S32: 1.7444 S33: -0.6263 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 8:72) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8408 -4.8372 62.3763 REMARK 3 T TENSOR REMARK 3 T11: 0.2418 T22: 0.3120 REMARK 3 T33: 0.2049 T12: 0.0404 REMARK 3 T13: 0.0153 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 5.4962 L22: 7.5869 REMARK 3 L33: 5.6425 L12: -0.0512 REMARK 3 L13: 1.4380 L23: -0.9141 REMARK 3 S TENSOR REMARK 3 S11: -0.0570 S12: 0.0390 S13: -0.0681 REMARK 3 S21: -0.4297 S22: -0.2310 S23: 0.4631 REMARK 3 S31: 0.1461 S32: -0.4343 S33: 0.3124 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 73:82) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6144 -20.0168 60.2306 REMARK 3 T TENSOR REMARK 3 T11: 0.7654 T22: 0.3876 REMARK 3 T33: 0.8158 T12: -0.0462 REMARK 3 T13: 0.1239 T23: -0.1620 REMARK 3 L TENSOR REMARK 3 L11: 2.8768 L22: 6.7214 REMARK 3 L33: 4.8558 L12: -2.5953 REMARK 3 L13: 0.1250 L23: -2.1746 REMARK 3 S TENSOR REMARK 3 S11: 0.4190 S12: -0.0520 S13: -1.0730 REMARK 3 S21: -0.2816 S22: -0.9718 S23: 1.2071 REMARK 3 S31: 2.0613 S32: -0.0805 S33: 0.3783 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 83:173) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7284 7.7796 68.9165 REMARK 3 T TENSOR REMARK 3 T11: 0.4527 T22: 0.2633 REMARK 3 T33: 0.2540 T12: 0.0166 REMARK 3 T13: 0.0256 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 5.8698 L22: 7.4911 REMARK 3 L33: 4.3325 L12: 1.4222 REMARK 3 L13: -0.2017 L23: -1.9152 REMARK 3 S TENSOR REMARK 3 S11: 0.1839 S12: -0.2084 S13: 0.3045 REMARK 3 S21: 0.6974 S22: -0.3101 S23: -0.4525 REMARK 3 S31: -0.9267 S32: 0.1196 S33: 0.0639 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 1:53) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6184 -18.4039 78.1911 REMARK 3 T TENSOR REMARK 3 T11: 0.2658 T22: 0.4840 REMARK 3 T33: 0.8829 T12: 0.0209 REMARK 3 T13: -0.1776 T23: 0.1596 REMARK 3 L TENSOR REMARK 3 L11: 3.0989 L22: 4.7061 REMARK 3 L33: 2.8343 L12: -1.7055 REMARK 3 L13: -0.3672 L23: -1.4482 REMARK 3 S TENSOR REMARK 3 S11: 0.1812 S12: 0.2295 S13: 0.0933 REMARK 3 S21: 0.9433 S22: -0.8287 S23: -1.7699 REMARK 3 S31: 0.0730 S32: 0.5277 S33: 0.3375 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 54:79) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2559 -26.4760 69.1434 REMARK 3 T TENSOR REMARK 3 T11: 0.4818 T22: 0.4674 REMARK 3 T33: 0.6576 T12: 0.2272 REMARK 3 T13: 0.1775 T23: 0.1042 REMARK 3 L TENSOR REMARK 3 L11: 4.9095 L22: 5.6336 REMARK 3 L33: 6.2896 L12: 0.2022 REMARK 3 L13: 0.0518 L23: 3.4568 REMARK 3 S TENSOR REMARK 3 S11: 0.1331 S12: 0.4393 S13: -1.0738 REMARK 3 S21: -0.6337 S22: -0.5366 S23: -0.2086 REMARK 3 S31: 1.7528 S32: 0.8060 S33: 0.3630 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 80:99) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9368 -19.9368 73.0792 REMARK 3 T TENSOR REMARK 3 T11: 0.4100 T22: 0.4918 REMARK 3 T33: 0.4877 T12: 0.0246 REMARK 3 T13: 0.0627 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 4.0787 L22: 4.8394 REMARK 3 L33: 9.7176 L12: -0.0887 REMARK 3 L13: -6.0504 L23: -1.0794 REMARK 3 S TENSOR REMARK 3 S11: -0.4432 S12: 0.6221 S13: -0.6941 REMARK 3 S21: 0.6388 S22: 0.1696 S23: -0.1681 REMARK 3 S31: 0.9145 S32: -0.0500 S33: 0.2402 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 100:173) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9754 -16.1426 91.7262 REMARK 3 T TENSOR REMARK 3 T11: 1.1766 T22: 0.5510 REMARK 3 T33: 0.4098 T12: 0.1430 REMARK 3 T13: -0.0148 T23: 0.0940 REMARK 3 L TENSOR REMARK 3 L11: 4.3645 L22: 0.6734 REMARK 3 L33: 8.0381 L12: -0.1806 REMARK 3 L13: -1.4016 L23: -1.8436 REMARK 3 S TENSOR REMARK 3 S11: -0.4048 S12: -0.9251 S13: -0.1703 REMARK 3 S21: 2.3171 S22: 0.3544 S23: 0.1213 REMARK 3 S31: -0.6427 S32: 0.1456 S33: -0.0043 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VYV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228169. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11477 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.1900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.80600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5U8J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 26.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8K, 50 MM POTASSIUM DIHYDROGEN REMARK 280 PHOSPHATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.42650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 174 REMARK 465 PRO A 175 REMARK 465 ALA A 176 REMARK 465 VAL A 177 REMARK 465 THR A 178 REMARK 465 ASP A 179 REMARK 465 MET A 180 REMARK 465 SER A 181 REMARK 465 ASN A 182 REMARK 465 ALA A 183 REMARK 465 VAL A 184 REMARK 465 ASP A 185 REMARK 465 GLY A 186 REMARK 465 ASP A 187 REMARK 465 LEU A 188 REMARK 465 GLN A 189 REMARK 465 ALA A 190 REMARK 465 ARG A 191 REMARK 465 VAL A 192 REMARK 465 GLU A 193 REMARK 465 ALA A 194 REMARK 465 LEU A 195 REMARK 465 GLU A 196 REMARK 465 ILE A 197 REMARK 465 GLU A 198 REMARK 465 VAL A 199 REMARK 465 ALA A 200 REMARK 465 GLU A 201 REMARK 465 LEU A 202 REMARK 465 LYS A 203 REMARK 465 GLN A 204 REMARK 465 ARG A 205 REMARK 465 LEU A 206 REMARK 465 ASP A 207 REMARK 465 SER A 208 REMARK 465 LEU A 209 REMARK 465 LEU A 210 REMARK 465 ALA A 211 REMARK 465 HIS A 212 REMARK 465 LEU A 213 REMARK 465 GLY A 214 REMARK 465 ASP A 215 REMARK 465 PHE B 74 REMARK 465 GLY B 75 REMARK 465 ASN B 76 REMARK 465 GLN B 174 REMARK 465 PRO B 175 REMARK 465 ALA B 176 REMARK 465 VAL B 177 REMARK 465 THR B 178 REMARK 465 ASP B 179 REMARK 465 MET B 180 REMARK 465 SER B 181 REMARK 465 ASN B 182 REMARK 465 ALA B 183 REMARK 465 VAL B 184 REMARK 465 ASP B 185 REMARK 465 GLY B 186 REMARK 465 ASP B 187 REMARK 465 LEU B 188 REMARK 465 GLN B 189 REMARK 465 ALA B 190 REMARK 465 ARG B 191 REMARK 465 VAL B 192 REMARK 465 GLU B 193 REMARK 465 ALA B 194 REMARK 465 LEU B 195 REMARK 465 GLU B 196 REMARK 465 ILE B 197 REMARK 465 GLU B 198 REMARK 465 VAL B 199 REMARK 465 ALA B 200 REMARK 465 GLU B 201 REMARK 465 LEU B 202 REMARK 465 LYS B 203 REMARK 465 GLN B 204 REMARK 465 ARG B 205 REMARK 465 LEU B 206 REMARK 465 ASP B 207 REMARK 465 SER B 208 REMARK 465 LEU B 209 REMARK 465 LEU B 210 REMARK 465 ALA B 211 REMARK 465 HIS B 212 REMARK 465 LEU B 213 REMARK 465 GLY B 214 REMARK 465 ASP B 215 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 125 118.49 -167.29 REMARK 500 PHE B 90 -35.93 -143.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP95687 RELATED DB: TARGETTRACK DBREF 5VYV A 1 215 UNP Q8X8M9 YCEH_ECO57 1 215 DBREF 5VYV B 1 215 UNP Q8X8M9 YCEH_ECO57 1 215 SEQRES 1 A 215 MET LYS TYR GLN LEU THR ALA LEU GLU ALA ARG VAL ILE SEQRES 2 A 215 GLY CYS LEU LEU GLU LYS GLN VAL THR THR PRO GLU GLN SEQRES 3 A 215 TYR PRO LEU SER VAL ASN GLY VAL VAL THR ALA CYS ASN SEQRES 4 A 215 GLN LYS THR ASN ARG GLU PRO VAL MET ASN LEU SER GLU SEQRES 5 A 215 SER GLU VAL GLN GLU GLN LEU ASP ASN LEU VAL LYS ARG SEQRES 6 A 215 HIS TYR LEU ARG THR VAL SER GLY PHE GLY ASN ARG VAL SEQRES 7 A 215 THR LYS TYR GLU GLN ARG PHE CYS ASN SER GLU PHE GLY SEQRES 8 A 215 ASP LEU LYS LEU SER ALA ALA GLU VAL ALA LEU ILE THR SEQRES 9 A 215 THR LEU LEU LEU ARG GLY ALA GLN THR PRO GLY GLU LEU SEQRES 10 A 215 ARG SER ARG ALA ALA ARG MET TYR GLU PHE SER ASP MET SEQRES 11 A 215 ALA GLU VAL GLU LEU THR LEU GLU GLN LEU ALA ASN ARG SEQRES 12 A 215 GLU ASP GLY PRO PHE VAL VAL ARG LEU ALA ARG GLU PRO SEQRES 13 A 215 GLY LYS ARG GLU SER ARG TYR MET HIS LEU PHE SER GLY SEQRES 14 A 215 GLU VAL GLU ASP GLN PRO ALA VAL THR ASP MET SER ASN SEQRES 15 A 215 ALA VAL ASP GLY ASP LEU GLN ALA ARG VAL GLU ALA LEU SEQRES 16 A 215 GLU ILE GLU VAL ALA GLU LEU LYS GLN ARG LEU ASP SER SEQRES 17 A 215 LEU LEU ALA HIS LEU GLY ASP SEQRES 1 B 215 MET LYS TYR GLN LEU THR ALA LEU GLU ALA ARG VAL ILE SEQRES 2 B 215 GLY CYS LEU LEU GLU LYS GLN VAL THR THR PRO GLU GLN SEQRES 3 B 215 TYR PRO LEU SER VAL ASN GLY VAL VAL THR ALA CYS ASN SEQRES 4 B 215 GLN LYS THR ASN ARG GLU PRO VAL MET ASN LEU SER GLU SEQRES 5 B 215 SER GLU VAL GLN GLU GLN LEU ASP ASN LEU VAL LYS ARG SEQRES 6 B 215 HIS TYR LEU ARG THR VAL SER GLY PHE GLY ASN ARG VAL SEQRES 7 B 215 THR LYS TYR GLU GLN ARG PHE CYS ASN SER GLU PHE GLY SEQRES 8 B 215 ASP LEU LYS LEU SER ALA ALA GLU VAL ALA LEU ILE THR SEQRES 9 B 215 THR LEU LEU LEU ARG GLY ALA GLN THR PRO GLY GLU LEU SEQRES 10 B 215 ARG SER ARG ALA ALA ARG MET TYR GLU PHE SER ASP MET SEQRES 11 B 215 ALA GLU VAL GLU LEU THR LEU GLU GLN LEU ALA ASN ARG SEQRES 12 B 215 GLU ASP GLY PRO PHE VAL VAL ARG LEU ALA ARG GLU PRO SEQRES 13 B 215 GLY LYS ARG GLU SER ARG TYR MET HIS LEU PHE SER GLY SEQRES 14 B 215 GLU VAL GLU ASP GLN PRO ALA VAL THR ASP MET SER ASN SEQRES 15 B 215 ALA VAL ASP GLY ASP LEU GLN ALA ARG VAL GLU ALA LEU SEQRES 16 B 215 GLU ILE GLU VAL ALA GLU LEU LYS GLN ARG LEU ASP SER SEQRES 17 B 215 LEU LEU ALA HIS LEU GLY ASP HET PEG A 301 7 HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 PEG C4 H10 O3 FORMUL 4 HOH *105(H2 O) HELIX 1 AA1 THR A 6 THR A 23 1 18 HELIX 2 AA2 PRO A 24 TYR A 27 5 4 HELIX 3 AA3 VAL A 31 ASN A 39 1 9 HELIX 4 AA4 SER A 51 ARG A 65 1 15 HELIX 5 AA5 SER A 96 GLY A 110 1 15 HELIX 6 AA6 THR A 113 ALA A 121 1 9 HELIX 7 AA7 ASP A 129 ARG A 143 1 15 HELIX 8 AA8 THR B 6 THR B 23 1 18 HELIX 9 AA9 VAL B 31 ASN B 39 1 9 HELIX 10 AB1 SER B 51 ARG B 65 1 15 HELIX 11 AB2 SER B 96 GLY B 110 1 15 HELIX 12 AB3 THR B 113 ALA B 121 1 9 HELIX 13 AB4 ALA B 131 ASN B 142 1 12 SHEET 1 AA1 3 LEU A 29 SER A 30 0 SHEET 2 AA1 3 LYS A 80 GLN A 83 -1 O TYR A 81 N LEU A 29 SHEET 3 AA1 3 LEU A 68 VAL A 71 -1 N VAL A 71 O LYS A 80 SHEET 1 AA2 2 VAL A 149 ARG A 151 0 SHEET 2 AA2 2 TYR A 163 HIS A 165 -1 O MET A 164 N VAL A 150 SHEET 1 AA3 3 LEU B 29 SER B 30 0 SHEET 2 AA3 3 THR B 79 GLN B 83 -1 O TYR B 81 N LEU B 29 SHEET 3 AA3 3 LEU B 68 SER B 72 -1 N VAL B 71 O LYS B 80 SHEET 1 AA4 2 VAL B 149 ARG B 151 0 SHEET 2 AA4 2 TYR B 163 HIS B 165 -1 O MET B 164 N VAL B 150 CISPEP 1 TYR A 27 PRO A 28 0 2.76 CISPEP 2 GLU A 45 PRO A 46 0 0.42 CISPEP 3 TYR B 27 PRO B 28 0 2.57 CISPEP 4 GLU B 45 PRO B 46 0 -1.04 SITE 1 AC1 3 ARG A 69 ARG A 84 PHE A 90 CRYST1 37.777 74.853 58.661 90.00 100.73 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026471 0.000000 0.005018 0.00000 SCALE2 0.000000 0.013360 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017351 0.00000