HEADER REPLICATION 06-JUN-17 5W2A TITLE STRUCTURE OF HUMAN DNA POLYMERASE KAPPA IN COMPLEX WITH LUCIDIN- TITLE 2 DERIVED DNA ADDUCT AND INCOMING DCMPNPP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE KAPPA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-526; COMPND 5 SYNONYM: DINB PROTEIN,DINP; COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(P*GP*CP*GP*GP*AP*TP*CP*AP*G)-3'); COMPND 10 CHAIN: C, P; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*AP*TP*GP*(LDG)P*CP*TP*GP*AP*TP*CP*CP*GP*C)-3'); COMPND 14 CHAIN: D, T; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLK, DINB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 11 ORGANISM_TAXID: 32644; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 15 ORGANISM_TAXID: 32644 KEYWDS TRANSLESION SYNTHESIS, LUCIDIN-DERIVED DNA ADDUCT, DNA POLYMERASE KEYWDS 2 KAPPA, MUTAGENESIS, REPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR V.K.JHA,H.LING REVDAT 3 13-MAR-24 5W2A 1 LINK REVDAT 2 29-NOV-17 5W2A 1 JRNL REVDAT 1 18-OCT-17 5W2A 0 JRNL AUTH O.P.YOCKEY,V.JHA,P.P.GHODKE,T.XU,W.XU,H.LING, JRNL AUTH 2 P.I.PRADEEPKUMAR,L.ZHAO JRNL TITL MECHANISM OF ERROR-FREE DNA REPLICATION PAST LUCIDIN-DERIVED JRNL TITL 2 DNA DAMAGE BY HUMAN DNA POLYMERASE KAPPA. JRNL REF CHEM. RES. TOXICOL. V. 30 2023 2017 JRNL REFN ISSN 1520-5010 JRNL PMID 28972744 JRNL DOI 10.1021/ACS.CHEMRESTOX.7B00227 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 29905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1228 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2163 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.4400 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.5160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6663 REMARK 3 NUCLEIC ACID ATOMS : 942 REMARK 3 HETEROGEN ATOMS : 102 REMARK 3 SOLVENT ATOMS : 28 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 109.1 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 22.31000 REMARK 3 B22 (A**2) : -13.78000 REMARK 3 B33 (A**2) : -8.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.404 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.553 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 36.482 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7932 ; 0.008 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 7168 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10882 ; 1.388 ; 1.869 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16440 ; 1.198 ; 2.996 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 858 ; 5.723 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 286 ;40.115 ;23.671 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1224 ;16.118 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 53 ;19.582 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1205 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8192 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1763 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3444 ; 5.930 ;10.944 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3443 ; 5.930 ;10.943 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4298 ; 9.345 ;16.410 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4299 ; 9.344 ;16.411 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4488 ; 6.011 ;11.356 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4488 ; 6.010 ;11.356 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6585 ; 9.706 ;16.822 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9103 ;13.745 ;91.419 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 9104 ;13.745 ;91.422 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 32 A 517 2 REMARK 3 1 B 32 B 517 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 3911 ; 0.04 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 2543 ; 8.02 ; 0.50 REMARK 3 MEDIUM THERMAL 1 D (A**2): 3911 ; 8.15 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : C P REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 5 C 13 1 REMARK 3 1 P 5 P 13 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 2 A (A**2): 288 ; 5.95 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : D T REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 D 2 D 14 1 REMARK 3 1 T 2 T 14 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 3 C (A**2): 440 ; 5.41 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5W2A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228311. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31180 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 47.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.57800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25-30% PEG400, 0.2M AMMONIUM NITRATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.94550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.67300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.50700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.67300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.94550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.50700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -24 REMARK 465 SER A -23 REMARK 465 TYR A -22 REMARK 465 TYR A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 ASP A -14 REMARK 465 TYR A -13 REMARK 465 ASP A -12 REMARK 465 ILE A -11 REMARK 465 PRO A -10 REMARK 465 THR A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 SER A 3 REMARK 465 THR A 4 REMARK 465 LYS A 5 REMARK 465 GLU A 6 REMARK 465 LYS A 7 REMARK 465 CYS A 8 REMARK 465 ASP A 9 REMARK 465 SER A 10 REMARK 465 TYR A 11 REMARK 465 LYS A 12 REMARK 465 ASP A 13 REMARK 465 ASP A 14 REMARK 465 LEU A 15 REMARK 465 LEU A 16 REMARK 465 LEU A 17 REMARK 465 ARG A 18 REMARK 465 MET A 19 REMARK 465 GLY A 20 REMARK 465 LEU A 21 REMARK 465 ASN A 22 REMARK 465 ASP A 23 REMARK 465 ASN A 24 REMARK 465 LYS A 25 REMARK 465 ALA A 26 REMARK 465 GLY A 27 REMARK 465 MET A 28 REMARK 465 GLU A 29 REMARK 465 GLY A 30 REMARK 465 MET A 225 REMARK 465 GLY A 226 REMARK 465 SER A 227 REMARK 465 SER A 228 REMARK 465 VAL A 229 REMARK 465 GLU A 230 REMARK 465 ASN A 231 REMARK 465 ASP A 232 REMARK 465 ASN A 233 REMARK 465 PRO A 234 REMARK 465 GLY A 235 REMARK 465 LYS A 236 REMARK 465 GLU A 237 REMARK 465 VAL A 238 REMARK 465 ASN A 239 REMARK 465 LYS A 240 REMARK 465 LEU A 241 REMARK 465 SER A 242 REMARK 465 GLU A 243 REMARK 465 HIS A 244 REMARK 465 GLU A 245 REMARK 465 ARG A 246 REMARK 465 SER A 247 REMARK 465 ILE A 248 REMARK 465 SER A 249 REMARK 465 PRO A 250 REMARK 465 LEU A 251 REMARK 465 LEU A 252 REMARK 465 PHE A 253 REMARK 465 GLU A 254 REMARK 465 GLU A 255 REMARK 465 SER A 256 REMARK 465 PRO A 257 REMARK 465 SER A 258 REMARK 465 ASP A 259 REMARK 465 VAL A 260 REMARK 465 GLN A 261 REMARK 465 PRO A 262 REMARK 465 PRO A 263 REMARK 465 GLY A 264 REMARK 465 ASP A 265 REMARK 465 PRO A 266 REMARK 465 PHE A 267 REMARK 465 GLN A 268 REMARK 465 VAL A 269 REMARK 465 ASN A 270 REMARK 465 PHE A 271 REMARK 465 GLU A 272 REMARK 465 GLU A 273 REMARK 465 GLN A 274 REMARK 465 ASN A 275 REMARK 465 ASN A 276 REMARK 465 PRO A 277 REMARK 465 GLN A 278 REMARK 465 ILE A 279 REMARK 465 LEU A 280 REMARK 465 GLN A 281 REMARK 465 GLU A 519 REMARK 465 GLU A 520 REMARK 465 ASP A 521 REMARK 465 ARG A 522 REMARK 465 LYS A 523 REMARK 465 HIS A 524 REMARK 465 GLN A 525 REMARK 465 GLN A 526 REMARK 465 MET B -24 REMARK 465 SER B -23 REMARK 465 TYR B -22 REMARK 465 TYR B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 ASP B -14 REMARK 465 TYR B -13 REMARK 465 ASP B -12 REMARK 465 ILE B -11 REMARK 465 PRO B -10 REMARK 465 THR B -9 REMARK 465 THR B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 SER B 3 REMARK 465 THR B 4 REMARK 465 LYS B 5 REMARK 465 GLU B 6 REMARK 465 LYS B 7 REMARK 465 CYS B 8 REMARK 465 ASP B 9 REMARK 465 SER B 10 REMARK 465 TYR B 11 REMARK 465 LYS B 12 REMARK 465 ASP B 13 REMARK 465 ASP B 14 REMARK 465 LEU B 15 REMARK 465 LEU B 16 REMARK 465 LEU B 17 REMARK 465 ARG B 18 REMARK 465 MET B 19 REMARK 465 GLY B 20 REMARK 465 LEU B 21 REMARK 465 ASN B 22 REMARK 465 ASP B 23 REMARK 465 ASN B 24 REMARK 465 LYS B 25 REMARK 465 ALA B 26 REMARK 465 GLY B 27 REMARK 465 MET B 28 REMARK 465 GLU B 29 REMARK 465 GLY B 30 REMARK 465 MET B 225 REMARK 465 GLY B 226 REMARK 465 SER B 227 REMARK 465 SER B 228 REMARK 465 VAL B 229 REMARK 465 GLU B 230 REMARK 465 ASN B 231 REMARK 465 ASP B 232 REMARK 465 ASN B 233 REMARK 465 PRO B 234 REMARK 465 GLY B 235 REMARK 465 LYS B 236 REMARK 465 GLU B 237 REMARK 465 VAL B 238 REMARK 465 ASN B 239 REMARK 465 LYS B 240 REMARK 465 LEU B 241 REMARK 465 SER B 242 REMARK 465 GLU B 243 REMARK 465 HIS B 244 REMARK 465 GLU B 245 REMARK 465 ARG B 246 REMARK 465 SER B 247 REMARK 465 ILE B 248 REMARK 465 SER B 249 REMARK 465 PRO B 250 REMARK 465 LEU B 251 REMARK 465 LEU B 252 REMARK 465 PHE B 253 REMARK 465 GLU B 254 REMARK 465 GLU B 255 REMARK 465 SER B 256 REMARK 465 PRO B 257 REMARK 465 SER B 258 REMARK 465 ASP B 259 REMARK 465 VAL B 260 REMARK 465 GLN B 261 REMARK 465 PRO B 262 REMARK 465 PRO B 263 REMARK 465 GLY B 264 REMARK 465 ASP B 265 REMARK 465 PRO B 266 REMARK 465 PHE B 267 REMARK 465 GLN B 268 REMARK 465 VAL B 269 REMARK 465 ASN B 270 REMARK 465 PHE B 271 REMARK 465 GLU B 272 REMARK 465 GLU B 273 REMARK 465 GLN B 274 REMARK 465 ASN B 275 REMARK 465 ASN B 276 REMARK 465 PRO B 277 REMARK 465 GLN B 278 REMARK 465 ILE B 279 REMARK 465 LEU B 280 REMARK 465 GLN B 281 REMARK 465 GLU B 519 REMARK 465 GLU B 520 REMARK 465 ASP B 521 REMARK 465 ARG B 522 REMARK 465 LYS B 523 REMARK 465 HIS B 524 REMARK 465 GLN B 525 REMARK 465 GLN B 526 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 32 CG OD1 OD2 REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 LYS A 35 CG CD CE NZ REMARK 470 ASN A 37 CG OD1 ND2 REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 MET A 41 CG SD CE REMARK 470 GLU A 42 CG CD OE1 OE2 REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 GLN A 59 CG CD OE1 NE2 REMARK 470 GLN A 69 CG CD OE1 NE2 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 GLN A 85 CG CD OE1 NE2 REMARK 470 MET A 91 CG SD CE REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 ASP A 125 CG OD1 OD2 REMARK 470 SER A 137 OG REMARK 470 ASP A 217 CG OD1 OD2 REMARK 470 PHE A 222 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 223 CG1 CG2 CD1 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 ASN A 282 CG OD1 ND2 REMARK 470 SER A 283 OG REMARK 470 ARG A 409 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 410 CG OD1 OD2 REMARK 470 LYS A 427 CG CD CE NZ REMARK 470 GLN A 444 CG CD OE1 NE2 REMARK 470 SER A 476 OG REMARK 470 ASN A 518 CG OD1 ND2 REMARK 470 LEU B 31 CG CD1 CD2 REMARK 470 ASP B 32 CG OD1 OD2 REMARK 470 GLU B 34 CG CD OE1 OE2 REMARK 470 LYS B 35 CG CD CE NZ REMARK 470 ASN B 37 CG OD1 ND2 REMARK 470 LYS B 38 CG CD CE NZ REMARK 470 MET B 41 CG SD CE REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 THR B 44 OG1 CG2 REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 GLN B 59 CG CD OE1 NE2 REMARK 470 GLU B 65 CG CD OE1 OE2 REMARK 470 GLN B 70 CG CD OE1 NE2 REMARK 470 LYS B 71 CG CD CE NZ REMARK 470 GLN B 73 CG CD OE1 NE2 REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 ARG B 88 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 92 CG CD OE1 OE2 REMARK 470 GLN B 95 CG CD OE1 NE2 REMARK 470 GLU B 122 CG CD OE1 OE2 REMARK 470 LYS B 124 CG CD CE NZ REMARK 470 ASP B 125 CG OD1 OD2 REMARK 470 SER B 137 OG REMARK 470 GLN B 163 CG CD OE1 NE2 REMARK 470 LYS B 206 CG CD CE NZ REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 ASN B 213 CG OD1 ND2 REMARK 470 ASP B 217 CG OD1 OD2 REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 ASN B 282 CG OD1 ND2 REMARK 470 SER B 283 OG REMARK 470 VAL B 285 CG1 CG2 REMARK 470 LYS B 295 CD CE NZ REMARK 470 THR B 408 OG1 CG2 REMARK 470 ARG B 409 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 410 CG OD1 OD2 REMARK 470 GLU B 412 CG CD OE1 OE2 REMARK 470 LYS B 414 CG CD CE NZ REMARK 470 LYS B 448 CE NZ REMARK 470 SER B 476 OG REMARK 470 LYS B 489 CG CD CE NZ REMARK 470 ASN B 518 CG OD1 ND2 REMARK 470 DA D 2 O5' REMARK 470 DA T 2 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OP2 DG C 5 O3' DC T 14 3555 1.78 REMARK 500 P DG C 5 O3' DC T 14 3555 2.07 REMARK 500 O3' DC D 14 OP1 DG P 5 3555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 110 42.78 35.88 REMARK 500 ASN A 120 88.94 -159.01 REMARK 500 CYS A 161 94.67 -169.65 REMARK 500 GLN A 163 7.07 -66.49 REMARK 500 ASN A 170 73.60 -110.89 REMARK 500 ASN A 191 30.41 -88.90 REMARK 500 SER A 196 -153.25 -157.17 REMARK 500 ASN A 327 36.29 -99.49 REMARK 500 LYS A 347 -64.49 -12.45 REMARK 500 SER A 479 -39.30 -170.62 REMARK 500 PHE A 500 122.79 -31.18 REMARK 500 GLN B 73 31.86 -89.73 REMARK 500 ALA B 110 43.48 34.24 REMARK 500 ASN B 120 89.68 -158.77 REMARK 500 CYS B 161 94.69 -170.05 REMARK 500 GLN B 163 4.41 -66.52 REMARK 500 ASN B 170 74.55 -114.16 REMARK 500 ASN B 191 32.13 -89.38 REMARK 500 SER B 196 -154.36 -156.37 REMARK 500 ASN B 327 34.89 -98.80 REMARK 500 LYS B 347 -63.80 -12.23 REMARK 500 SER B 479 -40.01 -169.99 REMARK 500 PHE B 500 121.83 -30.23 REMARK 500 PRO B 517 -80.79 -78.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 107 OD1 REMARK 620 2 MET A 108 O 76.7 REMARK 620 3 ASP A 198 OD2 79.4 86.0 REMARK 620 4 0KX A 603 O3G 72.4 72.0 147.3 REMARK 620 5 0KX A 603 O2B 169.6 94.5 105.8 99.8 REMARK 620 6 0KX A 603 O1A 94.7 161.3 76.0 121.8 95.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 107 OD1 REMARK 620 2 MET B 108 O 74.9 REMARK 620 3 ASP B 198 OD2 74.6 86.4 REMARK 620 4 0KX B 604 O1B 168.3 99.6 115.8 REMARK 620 5 0KX B 604 O3G 75.5 65.9 143.5 92.9 REMARK 620 6 0KX B 604 O2A 95.6 168.0 83.9 91.0 119.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL P 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG D 4 and LDG D REMARK 800 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide LDG D 5 and DC D REMARK 800 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG T 4 and LDG T REMARK 800 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide LDG T 5 and DC T REMARK 800 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5W2C RELATED DB: PDB DBREF 5W2A A 1 526 UNP Q9UBT6 POLK_HUMAN 1 526 DBREF 5W2A B 1 526 UNP Q9UBT6 POLK_HUMAN 1 526 DBREF 5W2A C 5 13 PDB 5W2A 5W2A 5 13 DBREF 5W2A D 2 14 PDB 5W2A 5W2A 2 14 DBREF 5W2A P 5 13 PDB 5W2A 5W2A 5 13 DBREF 5W2A T 2 14 PDB 5W2A 5W2A 2 14 SEQADV 5W2A MET A -24 UNP Q9UBT6 INITIATING METHIONINE SEQADV 5W2A SER A -23 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A TYR A -22 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A TYR A -21 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS A -20 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS A -19 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS A -18 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS A -17 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS A -16 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS A -15 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ASP A -14 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A TYR A -13 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ASP A -12 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ILE A -11 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A PRO A -10 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A THR A -9 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A THR A -8 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A GLU A -7 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ASN A -6 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A LEU A -5 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A TYR A -4 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A PHE A -3 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A GLN A -2 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A GLY A -1 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ALA A 0 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A MET B -24 UNP Q9UBT6 INITIATING METHIONINE SEQADV 5W2A SER B -23 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A TYR B -22 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A TYR B -21 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS B -20 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS B -19 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS B -18 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS B -17 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS B -16 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A HIS B -15 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ASP B -14 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A TYR B -13 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ASP B -12 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ILE B -11 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A PRO B -10 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A THR B -9 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A THR B -8 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A GLU B -7 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ASN B -6 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A LEU B -5 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A TYR B -4 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A PHE B -3 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A GLN B -2 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A GLY B -1 UNP Q9UBT6 EXPRESSION TAG SEQADV 5W2A ALA B 0 UNP Q9UBT6 EXPRESSION TAG SEQRES 1 A 551 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 A 551 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 A 551 ASP SER THR LYS GLU LYS CYS ASP SER TYR LYS ASP ASP SEQRES 4 A 551 LEU LEU LEU ARG MET GLY LEU ASN ASP ASN LYS ALA GLY SEQRES 5 A 551 MET GLU GLY LEU ASP LYS GLU LYS ILE ASN LYS ILE ILE SEQRES 6 A 551 MET GLU ALA THR LYS GLY SER ARG PHE TYR GLY ASN GLU SEQRES 7 A 551 LEU LYS LYS GLU LYS GLN VAL ASN GLN ARG ILE GLU ASN SEQRES 8 A 551 MET MET GLN GLN LYS ALA GLN ILE THR SER GLN GLN LEU SEQRES 9 A 551 ARG LYS ALA GLN LEU GLN VAL ASP ARG PHE ALA MET GLU SEQRES 10 A 551 LEU GLU GLN SER ARG ASN LEU SER ASN THR ILE VAL HIS SEQRES 11 A 551 ILE ASP MET ASP ALA PHE TYR ALA ALA VAL GLU MET ARG SEQRES 12 A 551 ASP ASN PRO GLU LEU LYS ASP LYS PRO ILE ALA VAL GLY SEQRES 13 A 551 SER MET SER MET LEU SER THR SER ASN TYR HIS ALA ARG SEQRES 14 A 551 ARG PHE GLY VAL ARG ALA ALA MET PRO GLY PHE ILE ALA SEQRES 15 A 551 LYS ARG LEU CYS PRO GLN LEU ILE ILE VAL PRO PRO ASN SEQRES 16 A 551 PHE ASP LYS TYR ARG ALA VAL SER LYS GLU VAL LYS GLU SEQRES 17 A 551 ILE LEU ALA ASP TYR ASP PRO ASN PHE MET ALA MET SER SEQRES 18 A 551 LEU ASP GLU ALA TYR LEU ASN ILE THR LYS HIS LEU GLU SEQRES 19 A 551 GLU ARG GLN ASN TRP PRO GLU ASP LYS ARG ARG TYR PHE SEQRES 20 A 551 ILE LYS MET GLY SER SER VAL GLU ASN ASP ASN PRO GLY SEQRES 21 A 551 LYS GLU VAL ASN LYS LEU SER GLU HIS GLU ARG SER ILE SEQRES 22 A 551 SER PRO LEU LEU PHE GLU GLU SER PRO SER ASP VAL GLN SEQRES 23 A 551 PRO PRO GLY ASP PRO PHE GLN VAL ASN PHE GLU GLU GLN SEQRES 24 A 551 ASN ASN PRO GLN ILE LEU GLN ASN SER VAL VAL PHE GLY SEQRES 25 A 551 THR SER ALA GLN GLU VAL VAL LYS GLU ILE ARG PHE ARG SEQRES 26 A 551 ILE GLU GLN LYS THR THR LEU THR ALA SER ALA GLY ILE SEQRES 27 A 551 ALA PRO ASN THR MET LEU ALA LYS VAL CYS SER ASP LYS SEQRES 28 A 551 ASN LYS PRO ASN GLY GLN TYR GLN ILE LEU PRO ASN ARG SEQRES 29 A 551 GLN ALA VAL MET ASP PHE ILE LYS ASP LEU PRO ILE ARG SEQRES 30 A 551 LYS VAL SER GLY ILE GLY LYS VAL THR GLU LYS MET LEU SEQRES 31 A 551 LYS ALA LEU GLY ILE ILE THR CYS THR GLU LEU TYR GLN SEQRES 32 A 551 GLN ARG ALA LEU LEU SER LEU LEU PHE SER GLU THR SER SEQRES 33 A 551 TRP HIS TYR PHE LEU HIS ILE SER LEU GLY LEU GLY SER SEQRES 34 A 551 THR HIS LEU THR ARG ASP GLY GLU ARG LYS SER MET SER SEQRES 35 A 551 VAL GLU ARG THR PHE SER GLU ILE ASN LYS ALA GLU GLU SEQRES 36 A 551 GLN TYR SER LEU CYS GLN GLU LEU CYS SER GLU LEU ALA SEQRES 37 A 551 GLN ASP LEU GLN LYS GLU ARG LEU LYS GLY ARG THR VAL SEQRES 38 A 551 THR ILE LYS LEU LYS ASN VAL ASN PHE GLU VAL LYS THR SEQRES 39 A 551 ARG ALA SER THR VAL SER SER VAL VAL SER THR ALA GLU SEQRES 40 A 551 GLU ILE PHE ALA ILE ALA LYS GLU LEU LEU LYS THR GLU SEQRES 41 A 551 ILE ASP ALA ASP PHE PRO HIS PRO LEU ARG LEU ARG LEU SEQRES 42 A 551 MET GLY VAL ARG ILE SER SER PHE PRO ASN GLU GLU ASP SEQRES 43 A 551 ARG LYS HIS GLN GLN SEQRES 1 B 551 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 B 551 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 B 551 ASP SER THR LYS GLU LYS CYS ASP SER TYR LYS ASP ASP SEQRES 4 B 551 LEU LEU LEU ARG MET GLY LEU ASN ASP ASN LYS ALA GLY SEQRES 5 B 551 MET GLU GLY LEU ASP LYS GLU LYS ILE ASN LYS ILE ILE SEQRES 6 B 551 MET GLU ALA THR LYS GLY SER ARG PHE TYR GLY ASN GLU SEQRES 7 B 551 LEU LYS LYS GLU LYS GLN VAL ASN GLN ARG ILE GLU ASN SEQRES 8 B 551 MET MET GLN GLN LYS ALA GLN ILE THR SER GLN GLN LEU SEQRES 9 B 551 ARG LYS ALA GLN LEU GLN VAL ASP ARG PHE ALA MET GLU SEQRES 10 B 551 LEU GLU GLN SER ARG ASN LEU SER ASN THR ILE VAL HIS SEQRES 11 B 551 ILE ASP MET ASP ALA PHE TYR ALA ALA VAL GLU MET ARG SEQRES 12 B 551 ASP ASN PRO GLU LEU LYS ASP LYS PRO ILE ALA VAL GLY SEQRES 13 B 551 SER MET SER MET LEU SER THR SER ASN TYR HIS ALA ARG SEQRES 14 B 551 ARG PHE GLY VAL ARG ALA ALA MET PRO GLY PHE ILE ALA SEQRES 15 B 551 LYS ARG LEU CYS PRO GLN LEU ILE ILE VAL PRO PRO ASN SEQRES 16 B 551 PHE ASP LYS TYR ARG ALA VAL SER LYS GLU VAL LYS GLU SEQRES 17 B 551 ILE LEU ALA ASP TYR ASP PRO ASN PHE MET ALA MET SER SEQRES 18 B 551 LEU ASP GLU ALA TYR LEU ASN ILE THR LYS HIS LEU GLU SEQRES 19 B 551 GLU ARG GLN ASN TRP PRO GLU ASP LYS ARG ARG TYR PHE SEQRES 20 B 551 ILE LYS MET GLY SER SER VAL GLU ASN ASP ASN PRO GLY SEQRES 21 B 551 LYS GLU VAL ASN LYS LEU SER GLU HIS GLU ARG SER ILE SEQRES 22 B 551 SER PRO LEU LEU PHE GLU GLU SER PRO SER ASP VAL GLN SEQRES 23 B 551 PRO PRO GLY ASP PRO PHE GLN VAL ASN PHE GLU GLU GLN SEQRES 24 B 551 ASN ASN PRO GLN ILE LEU GLN ASN SER VAL VAL PHE GLY SEQRES 25 B 551 THR SER ALA GLN GLU VAL VAL LYS GLU ILE ARG PHE ARG SEQRES 26 B 551 ILE GLU GLN LYS THR THR LEU THR ALA SER ALA GLY ILE SEQRES 27 B 551 ALA PRO ASN THR MET LEU ALA LYS VAL CYS SER ASP LYS SEQRES 28 B 551 ASN LYS PRO ASN GLY GLN TYR GLN ILE LEU PRO ASN ARG SEQRES 29 B 551 GLN ALA VAL MET ASP PHE ILE LYS ASP LEU PRO ILE ARG SEQRES 30 B 551 LYS VAL SER GLY ILE GLY LYS VAL THR GLU LYS MET LEU SEQRES 31 B 551 LYS ALA LEU GLY ILE ILE THR CYS THR GLU LEU TYR GLN SEQRES 32 B 551 GLN ARG ALA LEU LEU SER LEU LEU PHE SER GLU THR SER SEQRES 33 B 551 TRP HIS TYR PHE LEU HIS ILE SER LEU GLY LEU GLY SER SEQRES 34 B 551 THR HIS LEU THR ARG ASP GLY GLU ARG LYS SER MET SER SEQRES 35 B 551 VAL GLU ARG THR PHE SER GLU ILE ASN LYS ALA GLU GLU SEQRES 36 B 551 GLN TYR SER LEU CYS GLN GLU LEU CYS SER GLU LEU ALA SEQRES 37 B 551 GLN ASP LEU GLN LYS GLU ARG LEU LYS GLY ARG THR VAL SEQRES 38 B 551 THR ILE LYS LEU LYS ASN VAL ASN PHE GLU VAL LYS THR SEQRES 39 B 551 ARG ALA SER THR VAL SER SER VAL VAL SER THR ALA GLU SEQRES 40 B 551 GLU ILE PHE ALA ILE ALA LYS GLU LEU LEU LYS THR GLU SEQRES 41 B 551 ILE ASP ALA ASP PHE PRO HIS PRO LEU ARG LEU ARG LEU SEQRES 42 B 551 MET GLY VAL ARG ILE SER SER PHE PRO ASN GLU GLU ASP SEQRES 43 B 551 ARG LYS HIS GLN GLN SEQRES 1 C 9 DG DC DG DG DA DT DC DA DG SEQRES 1 D 13 DA DT DG LDG DC DT DG DA DT DC DC DG DC SEQRES 1 P 9 DG DC DG DG DA DT DC DA DG SEQRES 1 T 13 DA DT DG LDG DC DT DG DA DT DC DC DG DC HET LDG D 5 43 HET LDG T 5 43 HET MG A 601 1 HET GOL A 602 6 HET 0KX A 603 28 HET PGE A 604 10 HET MG B 601 1 HET GOL B 602 6 HET GOL B 603 6 HET 0KX B 604 28 HET PGE B 605 10 HET GOL P 101 6 HETNAM LDG 2'-DEOXY-N-[(1,3-DIMETHOXY-9,10-DIOXO-9,10- HETNAM 2 LDG DIHYDROANTHRACEN-2-YL)METHYL]GUANOSINE 5'-(DIHYDROGEN HETNAM 3 LDG PHOSPHATE) HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM 0KX 2'-DEOXY-5'-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 0KX PHOSPHORYL]AMINO}PHOSPHORYL]CYTIDINE HETNAM PGE TRIETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 LDG 2(C27 H26 N5 O11 P) FORMUL 7 MG 2(MG 2+) FORMUL 8 GOL 4(C3 H8 O3) FORMUL 9 0KX 2(C9 H17 N4 O12 P3) FORMUL 10 PGE 2(C6 H14 O4) FORMUL 17 HOH *28(H2 O) HELIX 1 AA1 ASP A 32 LYS A 45 1 14 HELIX 2 AA2 SER A 47 GLN A 73 1 27 HELIX 3 AA3 THR A 75 ARG A 97 1 23 HELIX 4 AA4 ALA A 110 ASP A 119 1 10 HELIX 5 AA5 ASN A 120 LYS A 124 5 5 HELIX 6 AA6 ASN A 140 ARG A 145 1 6 HELIX 7 AA7 PRO A 153 CYS A 161 1 9 HELIX 8 AA8 ASN A 170 ASP A 189 1 20 HELIX 9 AA9 ILE A 204 GLN A 212 1 9 HELIX 10 AB1 ASN A 213 TRP A 214 5 2 HELIX 11 AB2 PRO A 215 LYS A 218 5 4 HELIX 12 AB3 SER A 289 THR A 306 1 18 HELIX 13 AB4 ASN A 316 SER A 324 1 9 HELIX 14 AB5 ASN A 338 LYS A 347 1 10 HELIX 15 AB6 ASP A 348 LEU A 349 5 2 HELIX 16 AB7 PRO A 350 VAL A 354 5 5 HELIX 17 AB8 GLY A 358 ALA A 367 1 10 HELIX 18 AB9 THR A 372 GLN A 379 1 8 HELIX 19 AC1 GLN A 379 PHE A 387 1 9 HELIX 20 AC2 SER A 388 LEU A 400 1 13 HELIX 21 AC3 LYS A 427 ARG A 450 1 24 HELIX 22 AC4 THR A 480 PHE A 500 1 21 HELIX 23 AC5 ASP B 32 LYS B 45 1 14 HELIX 24 AC6 SER B 47 GLN B 73 1 27 HELIX 25 AC7 THR B 75 ARG B 97 1 23 HELIX 26 AC8 ALA B 110 ASP B 119 1 10 HELIX 27 AC9 ASN B 120 LYS B 124 5 5 HELIX 28 AD1 ASN B 140 ARG B 145 1 6 HELIX 29 AD2 PRO B 153 CYS B 161 1 9 HELIX 30 AD3 ASN B 170 ASP B 189 1 20 HELIX 31 AD4 ILE B 204 GLN B 212 1 9 HELIX 32 AD5 GLU B 216 LYS B 218 5 3 HELIX 33 AD6 SER B 289 THR B 306 1 18 HELIX 34 AD7 ASN B 316 ASP B 325 1 10 HELIX 35 AD8 ASN B 338 LYS B 347 1 10 HELIX 36 AD9 ASP B 348 LEU B 349 5 2 HELIX 37 AE1 PRO B 350 VAL B 354 5 5 HELIX 38 AE2 GLY B 358 ALA B 367 1 10 HELIX 39 AE3 THR B 372 GLN B 379 1 8 HELIX 40 AE4 GLN B 379 PHE B 387 1 9 HELIX 41 AE5 SER B 388 LEU B 400 1 13 HELIX 42 AE6 LYS B 427 ARG B 450 1 24 HELIX 43 AE7 THR B 480 PHE B 500 1 21 SHEET 1 AA1 4 MET A 193 ALA A 194 0 SHEET 2 AA1 4 GLU A 199 ASN A 203 -1 O TYR A 201 N MET A 193 SHEET 3 AA1 4 ILE A 103 MET A 108 -1 N VAL A 104 O LEU A 202 SHEET 4 AA1 4 ALA A 309 ALA A 314 -1 O ALA A 314 N ILE A 103 SHEET 1 AA2 3 LEU A 136 SER A 139 0 SHEET 2 AA2 3 ILE A 128 GLY A 131 -1 N VAL A 130 O SER A 137 SHEET 3 AA2 3 ILE A 165 VAL A 167 1 O VAL A 167 N ALA A 129 SHEET 1 AA3 2 ARG A 220 TYR A 221 0 SHEET 2 AA3 2 VAL A 284 VAL A 285 -1 O VAL A 284 N TYR A 221 SHEET 1 AA4 4 SER A 415 ILE A 425 0 SHEET 2 AA4 4 LEU A 506 SER A 514 -1 O VAL A 511 N VAL A 418 SHEET 3 AA4 4 GLY A 453 ASN A 462 -1 N THR A 457 O ARG A 512 SHEET 4 AA4 4 VAL A 467 VAL A 478 -1 O VAL A 478 N GLY A 453 SHEET 1 AA5 4 MET B 193 ALA B 194 0 SHEET 2 AA5 4 GLU B 199 ASN B 203 -1 O TYR B 201 N MET B 193 SHEET 3 AA5 4 ILE B 103 MET B 108 -1 N VAL B 104 O LEU B 202 SHEET 4 AA5 4 ALA B 309 ALA B 314 -1 O SER B 310 N ASP B 107 SHEET 1 AA6 3 LEU B 136 SER B 139 0 SHEET 2 AA6 3 ILE B 128 GLY B 131 -1 N VAL B 130 O SER B 137 SHEET 3 AA6 3 ILE B 165 VAL B 167 1 O VAL B 167 N ALA B 129 SHEET 1 AA7 2 ARG B 220 TYR B 221 0 SHEET 2 AA7 2 VAL B 284 VAL B 285 -1 O VAL B 284 N TYR B 221 SHEET 1 AA8 4 SER B 415 ILE B 425 0 SHEET 2 AA8 4 LEU B 506 SER B 514 -1 O VAL B 511 N VAL B 418 SHEET 3 AA8 4 GLY B 453 ASN B 462 -1 N THR B 457 O ARG B 512 SHEET 4 AA8 4 VAL B 467 VAL B 478 -1 O VAL B 478 N GLY B 453 LINK O3' DG D 4 P LDG D 5 1555 1555 1.57 LINK O3' LDG D 5 P DC D 6 1555 1555 1.55 LINK O3' DG T 4 P LDG T 5 1555 1555 1.62 LINK O3' LDG T 5 P DC T 6 1555 1555 1.61 LINK OD1 ASP A 107 MG MG A 601 1555 1555 2.17 LINK O MET A 108 MG MG A 601 1555 1555 2.17 LINK OD2 ASP A 198 MG MG A 601 1555 1555 2.17 LINK MG MG A 601 O3G 0KX A 603 1555 1555 2.18 LINK MG MG A 601 O2B 0KX A 603 1555 1555 2.18 LINK MG MG A 601 O1A 0KX A 603 1555 1555 2.17 LINK OD1 ASP B 107 MG MG B 601 1555 1555 2.18 LINK O MET B 108 MG MG B 601 1555 1555 2.18 LINK OD2 ASP B 198 MG MG B 601 1555 1555 2.17 LINK MG MG B 601 O1B 0KX B 604 1555 1555 2.17 LINK MG MG B 601 O3G 0KX B 604 1555 1555 2.17 LINK MG MG B 601 O2A 0KX B 604 1555 1555 2.17 CISPEP 1 LYS A 328 PRO A 329 0 5.07 CISPEP 2 PHE A 500 PRO A 501 0 10.97 CISPEP 3 LYS B 328 PRO B 329 0 2.07 CISPEP 4 PHE B 500 PRO B 501 0 12.04 SITE 1 AC1 4 ASP A 107 MET A 108 ASP A 198 0KX A 603 SITE 1 AC2 1 GLU A 302 SITE 1 AC3 15 ASP A 107 MET A 108 ASP A 109 ALA A 110 SITE 2 AC3 15 PHE A 111 TYR A 112 SER A 137 THR A 138 SITE 3 AC3 15 TYR A 141 ARG A 144 ASP A 198 LYS A 328 SITE 4 AC3 15 MG A 601 DG C 13 LDG D 5 SITE 1 AC4 2 PHE A 171 ARG A 175 SITE 1 AC5 4 ASP B 107 MET B 108 ASP B 198 0KX B 604 SITE 1 AC6 1 LYS B 489 SITE 1 AC7 1 TYR B 201 SITE 1 AC8 15 ASP B 107 MET B 108 ASP B 109 ALA B 110 SITE 2 AC8 15 PHE B 111 TYR B 112 SER B 137 THR B 138 SITE 3 AC8 15 TYR B 141 ARG B 144 ASP B 198 LYS B 328 SITE 4 AC8 15 MG B 601 DG P 13 LDG T 5 SITE 1 AC9 3 PHE B 171 ARG B 175 LDG T 5 SITE 1 AD1 4 MET B 195 DA P 12 DG P 13 DT T 7 SITE 1 AD2 15 THR A 44 SER A 47 PHE A 49 TYR A 112 SITE 2 AD2 15 SER A 134 MET A 135 ALA A 151 PRO A 153 SITE 3 AD2 15 PHE A 171 ARG A 507 0KX A 603 DG C 13 SITE 4 AD2 15 DT D 3 DC D 6 DT D 7 SITE 1 AD3 14 TYR A 112 MET A 135 ALA A 151 PHE A 171 SITE 2 AD3 14 GLU A 419 ARG A 420 THR A 421 ARG A 507 SITE 3 AD3 14 LEU A 508 0KX A 603 DA C 12 DG C 13 SITE 4 AD3 14 DG D 4 DT D 7 SITE 1 AD4 15 THR B 44 SER B 47 PHE B 49 TYR B 112 SITE 2 AD4 15 SER B 134 MET B 135 ALA B 151 PRO B 153 SITE 3 AD4 15 ARG B 507 0KX B 604 PGE B 605 DG P 13 SITE 4 AD4 15 DT T 3 DC T 6 DT T 7 SITE 1 AD5 14 TYR B 112 MET B 135 ALA B 151 GLU B 419 SITE 2 AD5 14 ARG B 420 THR B 421 ARG B 507 LEU B 508 SITE 3 AD5 14 0KX B 604 PGE B 605 DA P 12 DG P 13 SITE 4 AD5 14 DG T 4 DT T 7 CRYST1 63.891 129.014 167.346 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015652 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007751 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005976 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.940175 0.121517 0.318284 -9.41323 1 MTRIX2 2 0.124536 -0.992155 0.010926 -69.40789 1 MTRIX3 2 0.317115 0.029365 -0.947932 84.31232 1