HEADER DNA BINDING PROTEIN/DNA 16-JUN-17 5W6Q TITLE STRUCTURAL BASIS FOR RECOGNITION OF ARTIFICIAL DNA BY AN EVOLVED TITLE 2 KLENTAQ VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE I, THERMOSTABLE; COMPND 3 CHAIN: A, C, G; COMPND 4 SYNONYM: TAQ POLYMERASE 1; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(1W5))-3'); COMPND 9 CHAIN: B, E, H; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(P*GP*(1WA)P*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'); COMPND 13 CHAIN: D, F, I; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS AQUATICUS; SOURCE 3 ORGANISM_TAXID: 271; SOURCE 4 GENE: POLA, POL1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 10 ORGANISM_TAXID: 562; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 14 ORGANISM_TAXID: 562 KEYWDS PROTEIN-DNA, AEGIS, UNNATURAL BASE PAIR, HOST-GUEST SYSTEM, KEYWDS 2 TRANSFERASE-DNA COMPLEX, DNA BINDING PROTEIN, DNA BINDING PROTEIN- KEYWDS 3 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR I.SINGH,M.M.GEORGIADIS REVDAT 3 04-OCT-23 5W6Q 1 LINK REVDAT 2 19-SEP-18 5W6Q 1 JRNL REVDAT 1 18-JUL-18 5W6Q 0 JRNL AUTH I.SINGH,R.LAOS,S.HOSHIKA,S.A.BENNER,M.M.GEORGIADIS JRNL TITL SNAPSHOTS OF AN EVOLVED DNA POLYMERASE PRE- AND JRNL TITL 2 POST-INCORPORATION OF AN UNNATURAL NUCLEOTIDE. JRNL REF NUCLEIC ACIDS RES. V. 46 7977 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 29986111 JRNL DOI 10.1093/NAR/GKY552 REMARK 2 REMARK 2 RESOLUTION. 2.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 57623 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 2818 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1401 - 7.2132 0.96 2727 168 0.1807 0.1824 REMARK 3 2 7.2132 - 5.7281 0.99 2748 164 0.1922 0.2132 REMARK 3 3 5.7281 - 5.0048 0.99 2754 155 0.1799 0.2278 REMARK 3 4 5.0048 - 4.5476 0.98 2747 157 0.1721 0.2202 REMARK 3 5 4.5476 - 4.2218 0.98 2755 116 0.1655 0.1952 REMARK 3 6 4.2218 - 3.9730 0.99 2713 175 0.1732 0.2071 REMARK 3 7 3.9730 - 3.7741 0.99 2766 140 0.1885 0.2447 REMARK 3 8 3.7741 - 3.6099 0.99 2729 124 0.1986 0.2204 REMARK 3 9 3.6099 - 3.4710 0.99 2736 151 0.2148 0.2434 REMARK 3 10 3.4710 - 3.3512 0.99 2772 126 0.2166 0.2905 REMARK 3 11 3.3512 - 3.2465 0.99 2728 166 0.2343 0.3050 REMARK 3 12 3.2465 - 3.1537 0.99 2753 147 0.2539 0.2795 REMARK 3 13 3.1537 - 3.0707 0.99 2790 113 0.2593 0.2847 REMARK 3 14 3.0707 - 2.9958 0.99 2782 122 0.2760 0.3614 REMARK 3 15 2.9958 - 2.9277 0.99 2702 128 0.2751 0.3646 REMARK 3 16 2.9277 - 2.8654 0.99 2734 123 0.2760 0.2989 REMARK 3 17 2.8654 - 2.8081 0.98 2747 131 0.2773 0.3111 REMARK 3 18 2.8081 - 2.7551 0.98 2710 147 0.2752 0.3248 REMARK 3 19 2.7551 - 2.7059 0.98 2749 121 0.2822 0.3306 REMARK 3 20 2.7059 - 2.6600 0.97 2663 144 0.2978 0.3691 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 14329 REMARK 3 ANGLE : 0.703 19733 REMARK 3 CHIRALITY : 0.049 2193 REMARK 3 PLANARITY : 0.003 2308 REMARK 3 DIHEDRAL : 15.422 5486 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN D AND SEGID D REMARK 3 SELECTION : CHAIN F AND SEGID F REMARK 3 ATOM PAIRS NUMBER : 342 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN D AND SEGID D REMARK 3 SELECTION : CHAIN I AND SEGID I REMARK 3 ATOM PAIRS NUMBER : 342 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W6Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000228312. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57623 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.662 REMARK 200 RESOLUTION RANGE LOW (A) : 49.132 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.45200 REMARK 200 R SYM FOR SHELL (I) : 0.45200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3SZ2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14 % PEG 8000, 0.2 M MG FORMATE, 0.1 M REMARK 280 MES PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 99.64100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.30550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 99.64100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 57.30550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 293 REMARK 465 LEU A 294 REMARK 465 GLU A 295 REMARK 465 TRP A 645 REMARK 465 MET A 646 REMARK 465 PHE A 647 REMARK 465 GLY A 648 REMARK 465 VAL A 649 REMARK 465 PRO A 650 REMARK 465 ARG A 651 REMARK 465 GLU A 652 REMARK 465 ALA A 653 REMARK 465 VAL A 654 REMARK 465 ASP A 655 REMARK 465 PRO A 656 REMARK 465 LEU A 657 REMARK 465 MET A 658 REMARK 465 ARG A 659 REMARK 465 GLU A 687 REMARK 465 GLU A 688 REMARK 465 ALA A 689 REMARK 465 GLN A 690 REMARK 465 ALA A 691 REMARK 465 PHE A 692 REMARK 465 VAL A 832 REMARK 465 ALA C 293 REMARK 465 LEU C 294 REMARK 465 GLU C 295 REMARK 465 GLU C 296 REMARK 465 TRP C 645 REMARK 465 MET C 646 REMARK 465 PHE C 647 REMARK 465 GLY C 648 REMARK 465 VAL C 649 REMARK 465 PRO C 650 REMARK 465 ARG C 651 REMARK 465 GLU C 652 REMARK 465 ALA C 653 REMARK 465 VAL C 654 REMARK 465 ASP C 655 REMARK 465 PRO C 656 REMARK 465 LEU C 657 REMARK 465 MET C 658 REMARK 465 VAL C 832 REMARK 465 ALA G 293 REMARK 465 MET G 646 REMARK 465 PHE G 647 REMARK 465 GLY G 648 REMARK 465 VAL G 649 REMARK 465 PRO G 650 REMARK 465 ARG G 651 REMARK 465 GLU G 652 REMARK 465 ALA G 653 REMARK 465 VAL G 654 REMARK 465 ASP G 655 REMARK 465 PRO G 656 REMARK 465 VAL G 832 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 630 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 660 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 677 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 695 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 630 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 660 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 687 CG CD OE1 OE2 REMARK 470 GLU C 688 CG CD OE1 OE2 REMARK 470 ARG C 695 CG CD NE CZ NH1 NH2 REMARK 470 ARG G 630 CG CD NE CZ NH1 NH2 REMARK 470 ARG G 660 CG CD NE CZ NH1 NH2 REMARK 470 ARG G 677 CG CD NE CZ NH1 NH2 REMARK 470 GLN G 680 CG CD OE1 NE2 REMARK 470 GLU G 681 CG CD OE1 OE2 REMARK 470 GLU G 687 CG CD OE1 OE2 REMARK 470 GLU G 688 CG CD OE1 OE2 REMARK 470 ARG G 695 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1WA I 205 O3' DG I 206 P -0.245 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 381 116.04 -161.91 REMARK 500 THR A 399 -165.89 -112.52 REMARK 500 VAL A 433 -73.31 -114.50 REMARK 500 PRO A 501 107.26 -59.80 REMARK 500 ILE A 503 -66.48 -92.45 REMARK 500 TYR A 545 -54.30 -120.44 REMARK 500 VAL A 586 -20.73 -157.41 REMARK 500 ASP A 732 30.02 -90.97 REMARK 500 VAL A 783 71.59 -117.03 REMARK 500 HIS A 784 -70.81 62.72 REMARK 500 LEU C 321 93.86 -68.60 REMARK 500 VAL C 433 -69.56 -124.36 REMARK 500 ALA C 568 -6.67 -143.30 REMARK 500 VAL C 586 -16.43 -161.80 REMARK 500 ASP C 732 21.98 -149.45 REMARK 500 VAL C 783 73.77 -114.13 REMARK 500 HIS C 784 -67.23 63.68 REMARK 500 TYR C 811 94.89 -163.80 REMARK 500 ARG G 328 107.12 -162.76 REMARK 500 THR G 399 -156.52 -94.70 REMARK 500 VAL G 433 -67.25 -126.64 REMARK 500 ASP G 496 -62.16 -99.65 REMARK 500 ILE G 503 -71.29 -80.43 REMARK 500 LEU G 522 30.87 -91.40 REMARK 500 TYR G 545 -58.84 -121.37 REMARK 500 ASN G 583 32.17 -143.10 REMARK 500 VAL G 586 -19.32 -159.07 REMARK 500 ARG G 636 -165.80 -108.47 REMARK 500 ASP G 732 40.96 -87.88 REMARK 500 VAL G 783 69.76 -116.74 REMARK 500 HIS G 784 -71.19 63.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 964 DISTANCE = 5.93 ANGSTROMS DBREF 5W6Q A 293 832 UNP P19821 DPO1_THEAQ 293 832 DBREF 5W6Q B 101 112 PDB 5W6Q 5W6Q 101 112 DBREF 5W6Q D 204 216 PDB 5W6Q 5W6Q 204 216 DBREF 5W6Q C 293 832 UNP P19821 DPO1_THEAQ 293 832 DBREF 5W6Q E 101 112 PDB 5W6Q 5W6Q 101 112 DBREF 5W6Q F 204 216 PDB 5W6Q 5W6Q 204 216 DBREF 5W6Q G 293 832 UNP P19821 DPO1_THEAQ 293 832 DBREF 5W6Q H 101 112 PDB 5W6Q 5W6Q 101 112 DBREF 5W6Q I 204 216 PDB 5W6Q 5W6Q 204 216 SEQADV 5W6Q VAL A 444 UNP P19821 MET 444 ENGINEERED MUTATION SEQADV 5W6Q ALA A 527 UNP P19821 PRO 527 ENGINEERED MUTATION SEQADV 5W6Q GLU A 551 UNP P19821 ASP 551 ENGINEERED MUTATION SEQADV 5W6Q VAL A 832 UNP P19821 GLU 832 ENGINEERED MUTATION SEQADV 5W6Q VAL C 444 UNP P19821 MET 444 ENGINEERED MUTATION SEQADV 5W6Q ALA C 527 UNP P19821 PRO 527 ENGINEERED MUTATION SEQADV 5W6Q GLU C 551 UNP P19821 ASP 551 ENGINEERED MUTATION SEQADV 5W6Q VAL C 832 UNP P19821 GLU 832 ENGINEERED MUTATION SEQADV 5W6Q VAL G 444 UNP P19821 MET 444 ENGINEERED MUTATION SEQADV 5W6Q ALA G 527 UNP P19821 PRO 527 ENGINEERED MUTATION SEQADV 5W6Q GLU G 551 UNP P19821 ASP 551 ENGINEERED MUTATION SEQADV 5W6Q VAL G 832 UNP P19821 GLU 832 ENGINEERED MUTATION SEQRES 1 A 540 ALA LEU GLU GLU ALA PRO TRP PRO PRO PRO GLU GLY ALA SEQRES 2 A 540 PHE VAL GLY PHE VAL LEU SER ARG LYS GLU PRO MET TRP SEQRES 3 A 540 ALA ASP LEU LEU ALA LEU ALA ALA ALA ARG GLY GLY ARG SEQRES 4 A 540 VAL HIS ARG ALA PRO GLU PRO TYR LYS ALA LEU ARG ASP SEQRES 5 A 540 LEU LYS GLU ALA ARG GLY LEU LEU ALA LYS ASP LEU SER SEQRES 6 A 540 VAL LEU ALA LEU ARG GLU GLY LEU GLY LEU PRO PRO GLY SEQRES 7 A 540 ASP ASP PRO MET LEU LEU ALA TYR LEU LEU ASP PRO SER SEQRES 8 A 540 ASN THR THR PRO GLU GLY VAL ALA ARG ARG TYR GLY GLY SEQRES 9 A 540 GLU TRP THR GLU GLU ALA GLY GLU ARG ALA ALA LEU SER SEQRES 10 A 540 GLU ARG LEU PHE ALA ASN LEU TRP GLY ARG LEU GLU GLY SEQRES 11 A 540 GLU GLU ARG LEU LEU TRP LEU TYR ARG GLU VAL GLU ARG SEQRES 12 A 540 PRO LEU SER ALA VAL LEU ALA HIS VAL GLU ALA THR GLY SEQRES 13 A 540 VAL ARG LEU ASP VAL ALA TYR LEU ARG ALA LEU SER LEU SEQRES 14 A 540 GLU VAL ALA GLU GLU ILE ALA ARG LEU GLU ALA GLU VAL SEQRES 15 A 540 PHE ARG LEU ALA GLY HIS PRO PHE ASN LEU ASN SER ARG SEQRES 16 A 540 ASP GLN LEU GLU ARG VAL LEU PHE ASP GLU LEU GLY LEU SEQRES 17 A 540 PRO ALA ILE GLY LYS THR GLU LYS THR GLY LYS ARG SER SEQRES 18 A 540 THR SER ALA ALA VAL LEU GLU ALA LEU ARG GLU ALA HIS SEQRES 19 A 540 ALA ILE VAL GLU LYS ILE LEU GLN TYR ARG GLU LEU THR SEQRES 20 A 540 LYS LEU LYS SER THR TYR ILE ASP PRO LEU PRO GLU LEU SEQRES 21 A 540 ILE HIS PRO ARG THR GLY ARG LEU HIS THR ARG PHE ASN SEQRES 22 A 540 GLN THR ALA THR ALA THR GLY ARG LEU SER SER SER ASP SEQRES 23 A 540 PRO ASN LEU GLN ASN ILE PRO VAL ARG THR PRO LEU GLY SEQRES 24 A 540 GLN ARG ILE ARG ARG ALA PHE ILE ALA GLU GLU GLY TRP SEQRES 25 A 540 LEU LEU VAL ALA LEU ASP TYR SER GLN ILE GLU LEU ARG SEQRES 26 A 540 VAL LEU ALA HIS LEU SER GLY ASP GLU ASN LEU ILE ARG SEQRES 27 A 540 VAL PHE GLN GLU GLY ARG ASP ILE HIS THR GLU THR ALA SEQRES 28 A 540 SER TRP MET PHE GLY VAL PRO ARG GLU ALA VAL ASP PRO SEQRES 29 A 540 LEU MET ARG ARG ALA ALA LYS THR ILE ASN PHE GLY VAL SEQRES 30 A 540 LEU TYR GLY MET SER ALA HIS ARG LEU SER GLN GLU LEU SEQRES 31 A 540 ALA ILE PRO TYR GLU GLU ALA GLN ALA PHE ILE GLU ARG SEQRES 32 A 540 TYR PHE GLN SER PHE PRO LYS VAL ARG ALA TRP ILE GLU SEQRES 33 A 540 LYS THR LEU GLU GLU GLY ARG ARG ARG GLY TYR VAL GLU SEQRES 34 A 540 THR LEU PHE GLY ARG ARG ARG TYR VAL PRO ASP LEU GLU SEQRES 35 A 540 ALA ARG VAL LYS SER VAL ARG GLU ALA ALA GLU ARG MET SEQRES 36 A 540 ALA PHE ASN MET PRO VAL GLN GLY THR ALA ALA ASP LEU SEQRES 37 A 540 MET LYS LEU ALA MET VAL LYS LEU PHE PRO ARG LEU GLU SEQRES 38 A 540 GLU MET GLY ALA ARG MET LEU LEU GLN VAL HIS ASP GLU SEQRES 39 A 540 LEU VAL LEU GLU ALA PRO LYS GLU ARG ALA GLU ALA VAL SEQRES 40 A 540 ALA ARG LEU ALA LYS GLU VAL MET GLU GLY VAL TYR PRO SEQRES 41 A 540 LEU ALA VAL PRO LEU GLU VAL GLU VAL GLY ILE GLY GLU SEQRES 42 A 540 ASP TRP LEU SER ALA LYS VAL SEQRES 1 B 12 DG DA DC DC DA DC DG DG DC DG DC 1W5 SEQRES 1 D 13 DG 1WA DG DC DG DC DC DG DT DG DG DT DC SEQRES 1 C 540 ALA LEU GLU GLU ALA PRO TRP PRO PRO PRO GLU GLY ALA SEQRES 2 C 540 PHE VAL GLY PHE VAL LEU SER ARG LYS GLU PRO MET TRP SEQRES 3 C 540 ALA ASP LEU LEU ALA LEU ALA ALA ALA ARG GLY GLY ARG SEQRES 4 C 540 VAL HIS ARG ALA PRO GLU PRO TYR LYS ALA LEU ARG ASP SEQRES 5 C 540 LEU LYS GLU ALA ARG GLY LEU LEU ALA LYS ASP LEU SER SEQRES 6 C 540 VAL LEU ALA LEU ARG GLU GLY LEU GLY LEU PRO PRO GLY SEQRES 7 C 540 ASP ASP PRO MET LEU LEU ALA TYR LEU LEU ASP PRO SER SEQRES 8 C 540 ASN THR THR PRO GLU GLY VAL ALA ARG ARG TYR GLY GLY SEQRES 9 C 540 GLU TRP THR GLU GLU ALA GLY GLU ARG ALA ALA LEU SER SEQRES 10 C 540 GLU ARG LEU PHE ALA ASN LEU TRP GLY ARG LEU GLU GLY SEQRES 11 C 540 GLU GLU ARG LEU LEU TRP LEU TYR ARG GLU VAL GLU ARG SEQRES 12 C 540 PRO LEU SER ALA VAL LEU ALA HIS VAL GLU ALA THR GLY SEQRES 13 C 540 VAL ARG LEU ASP VAL ALA TYR LEU ARG ALA LEU SER LEU SEQRES 14 C 540 GLU VAL ALA GLU GLU ILE ALA ARG LEU GLU ALA GLU VAL SEQRES 15 C 540 PHE ARG LEU ALA GLY HIS PRO PHE ASN LEU ASN SER ARG SEQRES 16 C 540 ASP GLN LEU GLU ARG VAL LEU PHE ASP GLU LEU GLY LEU SEQRES 17 C 540 PRO ALA ILE GLY LYS THR GLU LYS THR GLY LYS ARG SER SEQRES 18 C 540 THR SER ALA ALA VAL LEU GLU ALA LEU ARG GLU ALA HIS SEQRES 19 C 540 ALA ILE VAL GLU LYS ILE LEU GLN TYR ARG GLU LEU THR SEQRES 20 C 540 LYS LEU LYS SER THR TYR ILE ASP PRO LEU PRO GLU LEU SEQRES 21 C 540 ILE HIS PRO ARG THR GLY ARG LEU HIS THR ARG PHE ASN SEQRES 22 C 540 GLN THR ALA THR ALA THR GLY ARG LEU SER SER SER ASP SEQRES 23 C 540 PRO ASN LEU GLN ASN ILE PRO VAL ARG THR PRO LEU GLY SEQRES 24 C 540 GLN ARG ILE ARG ARG ALA PHE ILE ALA GLU GLU GLY TRP SEQRES 25 C 540 LEU LEU VAL ALA LEU ASP TYR SER GLN ILE GLU LEU ARG SEQRES 26 C 540 VAL LEU ALA HIS LEU SER GLY ASP GLU ASN LEU ILE ARG SEQRES 27 C 540 VAL PHE GLN GLU GLY ARG ASP ILE HIS THR GLU THR ALA SEQRES 28 C 540 SER TRP MET PHE GLY VAL PRO ARG GLU ALA VAL ASP PRO SEQRES 29 C 540 LEU MET ARG ARG ALA ALA LYS THR ILE ASN PHE GLY VAL SEQRES 30 C 540 LEU TYR GLY MET SER ALA HIS ARG LEU SER GLN GLU LEU SEQRES 31 C 540 ALA ILE PRO TYR GLU GLU ALA GLN ALA PHE ILE GLU ARG SEQRES 32 C 540 TYR PHE GLN SER PHE PRO LYS VAL ARG ALA TRP ILE GLU SEQRES 33 C 540 LYS THR LEU GLU GLU GLY ARG ARG ARG GLY TYR VAL GLU SEQRES 34 C 540 THR LEU PHE GLY ARG ARG ARG TYR VAL PRO ASP LEU GLU SEQRES 35 C 540 ALA ARG VAL LYS SER VAL ARG GLU ALA ALA GLU ARG MET SEQRES 36 C 540 ALA PHE ASN MET PRO VAL GLN GLY THR ALA ALA ASP LEU SEQRES 37 C 540 MET LYS LEU ALA MET VAL LYS LEU PHE PRO ARG LEU GLU SEQRES 38 C 540 GLU MET GLY ALA ARG MET LEU LEU GLN VAL HIS ASP GLU SEQRES 39 C 540 LEU VAL LEU GLU ALA PRO LYS GLU ARG ALA GLU ALA VAL SEQRES 40 C 540 ALA ARG LEU ALA LYS GLU VAL MET GLU GLY VAL TYR PRO SEQRES 41 C 540 LEU ALA VAL PRO LEU GLU VAL GLU VAL GLY ILE GLY GLU SEQRES 42 C 540 ASP TRP LEU SER ALA LYS VAL SEQRES 1 E 12 DG DA DC DC DA DC DG DG DC DG DC 1W5 SEQRES 1 F 13 DG 1WA DG DC DG DC DC DG DT DG DG DT DC SEQRES 1 G 540 ALA LEU GLU GLU ALA PRO TRP PRO PRO PRO GLU GLY ALA SEQRES 2 G 540 PHE VAL GLY PHE VAL LEU SER ARG LYS GLU PRO MET TRP SEQRES 3 G 540 ALA ASP LEU LEU ALA LEU ALA ALA ALA ARG GLY GLY ARG SEQRES 4 G 540 VAL HIS ARG ALA PRO GLU PRO TYR LYS ALA LEU ARG ASP SEQRES 5 G 540 LEU LYS GLU ALA ARG GLY LEU LEU ALA LYS ASP LEU SER SEQRES 6 G 540 VAL LEU ALA LEU ARG GLU GLY LEU GLY LEU PRO PRO GLY SEQRES 7 G 540 ASP ASP PRO MET LEU LEU ALA TYR LEU LEU ASP PRO SER SEQRES 8 G 540 ASN THR THR PRO GLU GLY VAL ALA ARG ARG TYR GLY GLY SEQRES 9 G 540 GLU TRP THR GLU GLU ALA GLY GLU ARG ALA ALA LEU SER SEQRES 10 G 540 GLU ARG LEU PHE ALA ASN LEU TRP GLY ARG LEU GLU GLY SEQRES 11 G 540 GLU GLU ARG LEU LEU TRP LEU TYR ARG GLU VAL GLU ARG SEQRES 12 G 540 PRO LEU SER ALA VAL LEU ALA HIS VAL GLU ALA THR GLY SEQRES 13 G 540 VAL ARG LEU ASP VAL ALA TYR LEU ARG ALA LEU SER LEU SEQRES 14 G 540 GLU VAL ALA GLU GLU ILE ALA ARG LEU GLU ALA GLU VAL SEQRES 15 G 540 PHE ARG LEU ALA GLY HIS PRO PHE ASN LEU ASN SER ARG SEQRES 16 G 540 ASP GLN LEU GLU ARG VAL LEU PHE ASP GLU LEU GLY LEU SEQRES 17 G 540 PRO ALA ILE GLY LYS THR GLU LYS THR GLY LYS ARG SER SEQRES 18 G 540 THR SER ALA ALA VAL LEU GLU ALA LEU ARG GLU ALA HIS SEQRES 19 G 540 ALA ILE VAL GLU LYS ILE LEU GLN TYR ARG GLU LEU THR SEQRES 20 G 540 LYS LEU LYS SER THR TYR ILE ASP PRO LEU PRO GLU LEU SEQRES 21 G 540 ILE HIS PRO ARG THR GLY ARG LEU HIS THR ARG PHE ASN SEQRES 22 G 540 GLN THR ALA THR ALA THR GLY ARG LEU SER SER SER ASP SEQRES 23 G 540 PRO ASN LEU GLN ASN ILE PRO VAL ARG THR PRO LEU GLY SEQRES 24 G 540 GLN ARG ILE ARG ARG ALA PHE ILE ALA GLU GLU GLY TRP SEQRES 25 G 540 LEU LEU VAL ALA LEU ASP TYR SER GLN ILE GLU LEU ARG SEQRES 26 G 540 VAL LEU ALA HIS LEU SER GLY ASP GLU ASN LEU ILE ARG SEQRES 27 G 540 VAL PHE GLN GLU GLY ARG ASP ILE HIS THR GLU THR ALA SEQRES 28 G 540 SER TRP MET PHE GLY VAL PRO ARG GLU ALA VAL ASP PRO SEQRES 29 G 540 LEU MET ARG ARG ALA ALA LYS THR ILE ASN PHE GLY VAL SEQRES 30 G 540 LEU TYR GLY MET SER ALA HIS ARG LEU SER GLN GLU LEU SEQRES 31 G 540 ALA ILE PRO TYR GLU GLU ALA GLN ALA PHE ILE GLU ARG SEQRES 32 G 540 TYR PHE GLN SER PHE PRO LYS VAL ARG ALA TRP ILE GLU SEQRES 33 G 540 LYS THR LEU GLU GLU GLY ARG ARG ARG GLY TYR VAL GLU SEQRES 34 G 540 THR LEU PHE GLY ARG ARG ARG TYR VAL PRO ASP LEU GLU SEQRES 35 G 540 ALA ARG VAL LYS SER VAL ARG GLU ALA ALA GLU ARG MET SEQRES 36 G 540 ALA PHE ASN MET PRO VAL GLN GLY THR ALA ALA ASP LEU SEQRES 37 G 540 MET LYS LEU ALA MET VAL LYS LEU PHE PRO ARG LEU GLU SEQRES 38 G 540 GLU MET GLY ALA ARG MET LEU LEU GLN VAL HIS ASP GLU SEQRES 39 G 540 LEU VAL LEU GLU ALA PRO LYS GLU ARG ALA GLU ALA VAL SEQRES 40 G 540 ALA ARG LEU ALA LYS GLU VAL MET GLU GLY VAL TYR PRO SEQRES 41 G 540 LEU ALA VAL PRO LEU GLU VAL GLU VAL GLY ILE GLY GLU SEQRES 42 G 540 ASP TRP LEU SER ALA LYS VAL SEQRES 1 H 12 DG DA DC DC DA DC DG DG DC DG DC 1W5 SEQRES 1 I 13 DG 1WA DG DC DG DC DC DG DT DG DG DT DC HET 1W5 B 112 22 HET 1WA D 205 22 HET 1W5 E 112 22 HET 1WA F 205 22 HET 1W5 H 112 22 HET 1WA I 205 22 HETNAM 1W5 (1R)-1-(6-AMINO-2-HYDROXY-5-NITROPYRIDIN-3-YL)-1,4- HETNAM 2 1W5 ANHYDRO-2-DEOXY-5-O-PHOSPHONO-D-ERYTHRO-PENTITOL HETNAM 1WA 2-AMINO-8-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO- HETNAM 2 1WA PENTOFURANOSYL)-4-HYDROXY-1H-IMIDAZO[1,2-A][1,3, HETNAM 3 1WA 5]TRIAZINE-5,8-DIIUM FORMUL 2 1W5 3(C10 H14 N3 O9 P) FORMUL 3 1WA 3(C10 H16 N5 O7 P 2+) FORMUL 10 HOH *295(H2 O) HELIX 1 AA1 GLU A 337 LEU A 342 1 6 HELIX 2 AA2 LEU A 352 GLU A 363 1 12 HELIX 3 AA3 ASP A 372 ASP A 381 1 10 HELIX 4 AA4 THR A 386 GLY A 395 1 10 HELIX 5 AA5 GLU A 401 LEU A 420 1 20 HELIX 6 AA6 GLU A 423 VAL A 433 1 11 HELIX 7 AA7 VAL A 433 GLY A 448 1 16 HELIX 8 AA8 ASP A 452 GLY A 479 1 28 HELIX 9 AA9 SER A 486 ASP A 496 1 11 HELIX 10 AB1 SER A 515 ALA A 521 1 7 HELIX 11 AB2 HIS A 526 TYR A 545 1 20 HELIX 12 AB3 PRO A 548 ILE A 553 5 6 HELIX 13 AB4 THR A 588 ARG A 596 1 9 HELIX 14 AB5 GLN A 613 GLY A 624 1 12 HELIX 15 AB6 ASP A 625 GLY A 635 1 11 HELIX 16 AB7 ASP A 637 ALA A 643 1 7 HELIX 17 AB8 ALA A 661 VAL A 669 1 9 HELIX 18 AB9 SER A 674 LEU A 682 1 9 HELIX 19 AC1 GLU A 694 PHE A 700 1 7 HELIX 20 AC2 PHE A 700 GLY A 718 1 19 HELIX 21 AC3 PRO A 731 ALA A 735 5 5 HELIX 22 AC4 VAL A 737 GLU A 774 1 38 HELIX 23 AC5 LYS A 793 GLY A 809 1 17 HELIX 24 AC6 ASP A 826 LYS A 831 1 6 HELIX 25 AC7 GLU C 337 LEU C 342 1 6 HELIX 26 AC8 ARG C 343 LEU C 345 5 3 HELIX 27 AC9 LEU C 352 GLU C 363 1 12 HELIX 28 AD1 ASP C 372 ASP C 381 1 10 HELIX 29 AD2 THR C 386 GLY C 395 1 10 HELIX 30 AD3 GLU C 401 LEU C 420 1 20 HELIX 31 AD4 GLU C 423 VAL C 433 1 11 HELIX 32 AD5 VAL C 433 GLY C 448 1 16 HELIX 33 AD6 ASP C 452 GLY C 479 1 28 HELIX 34 AD7 SER C 486 ASP C 496 1 11 HELIX 35 AD8 SER C 515 ALA C 521 1 7 HELIX 36 AD9 HIS C 526 TYR C 545 1 20 HELIX 37 AE1 PRO C 548 ILE C 553 5 6 HELIX 38 AE2 THR C 588 ARG C 596 1 9 HELIX 39 AE3 GLN C 613 GLY C 624 1 12 HELIX 40 AE4 ASP C 625 GLY C 635 1 11 HELIX 41 AE5 ASP C 637 SER C 644 1 8 HELIX 42 AE6 ALA C 661 VAL C 669 1 9 HELIX 43 AE7 SER C 674 LEU C 682 1 9 HELIX 44 AE8 PRO C 685 PHE C 700 1 16 HELIX 45 AE9 PHE C 700 ARG C 717 1 18 HELIX 46 AF1 VAL C 737 MET C 775 1 39 HELIX 47 AF2 ARG C 795 GLY C 809 1 15 HELIX 48 AF3 ASP C 826 LYS C 831 1 6 HELIX 49 AF4 GLU G 337 LEU G 342 1 6 HELIX 50 AF5 LEU G 352 GLU G 363 1 12 HELIX 51 AF6 ASP G 372 ASP G 381 1 10 HELIX 52 AF7 THR G 386 GLY G 395 1 10 HELIX 53 AF8 GLU G 401 LEU G 420 1 20 HELIX 54 AF9 GLU G 423 VAL G 433 1 11 HELIX 55 AG1 VAL G 433 GLY G 448 1 16 HELIX 56 AG2 ASP G 452 GLY G 479 1 28 HELIX 57 AG3 SER G 486 ASP G 496 1 11 HELIX 58 AG4 SER G 515 GLU G 520 1 6 HELIX 59 AG5 HIS G 526 TYR G 545 1 20 HELIX 60 AG6 PRO G 548 ILE G 553 5 6 HELIX 61 AG7 THR G 588 ALA G 597 1 10 HELIX 62 AG8 GLN G 613 GLY G 624 1 12 HELIX 63 AG9 ASP G 625 GLY G 635 1 11 HELIX 64 AH1 ASP G 637 SER G 644 1 8 HELIX 65 AH2 ARG G 659 VAL G 669 1 11 HELIX 66 AH3 SER G 674 LEU G 682 1 9 HELIX 67 AH4 PRO G 685 GLN G 698 1 14 HELIX 68 AH5 PHE G 700 GLY G 718 1 19 HELIX 69 AH6 PRO G 731 ALA G 735 5 5 HELIX 70 AH7 VAL G 737 GLU G 774 1 38 HELIX 71 AH8 ARG G 795 GLY G 809 1 15 HELIX 72 AH9 ASP G 826 LYS G 831 1 6 SHEET 1 AA1 4 ALA A 297 PRO A 298 0 SHEET 2 AA1 4 ARG A 331 ARG A 334 1 O VAL A 332 N ALA A 297 SHEET 3 AA1 4 LEU A 321 ARG A 328 -1 N ALA A 326 O HIS A 333 SHEET 4 AA1 4 PHE A 306 LEU A 311 -1 N PHE A 306 O ALA A 327 SHEET 1 AA2 2 ARG A 450 LEU A 451 0 SHEET 2 AA2 2 PHE A 598 ILE A 599 -1 O ILE A 599 N ARG A 450 SHEET 1 AA3 2 ARG A 563 ASN A 565 0 SHEET 2 AA3 2 SER A 575 SER A 577 -1 O SER A 575 N ASN A 565 SHEET 1 AA4 4 ARG A 778 GLN A 782 0 SHEET 2 AA4 4 GLU A 786 PRO A 792 -1 O VAL A 788 N LEU A 781 SHEET 3 AA4 4 TRP A 604 TYR A 611 -1 N VAL A 607 O LEU A 789 SHEET 4 AA4 4 VAL A 819 GLY A 824 -1 O GLY A 824 N LEU A 606 SHEET 1 AA5 2 TYR A 719 GLU A 721 0 SHEET 2 AA5 2 ARG A 727 TYR A 729 -1 O ARG A 728 N VAL A 720 SHEET 1 AA6 3 PHE C 306 LEU C 311 0 SHEET 2 AA6 3 LEU C 321 ARG C 328 -1 O ALA C 327 N PHE C 306 SHEET 3 AA6 3 ARG C 331 ARG C 334 -1 O HIS C 333 N ALA C 326 SHEET 1 AA7 2 ARG C 563 ASN C 565 0 SHEET 2 AA7 2 SER C 575 SER C 577 -1 O SER C 575 N ASN C 565 SHEET 1 AA8 4 ARG C 778 GLN C 782 0 SHEET 2 AA8 4 GLU C 786 PRO C 792 -1 O GLU C 790 N ARG C 778 SHEET 3 AA8 4 TRP C 604 TYR C 611 -1 N LEU C 609 O LEU C 787 SHEET 4 AA8 4 VAL C 819 GLY C 824 -1 O GLY C 822 N ALA C 608 SHEET 1 AA9 2 TYR C 719 GLU C 721 0 SHEET 2 AA9 2 ARG C 727 TYR C 729 -1 O ARG C 728 N VAL C 720 SHEET 1 AB1 4 GLU G 295 ALA G 297 0 SHEET 2 AB1 4 ARG G 331 ARG G 334 1 O VAL G 332 N GLU G 295 SHEET 3 AB1 4 LEU G 321 ARG G 328 -1 N ALA G 326 O HIS G 333 SHEET 4 AB1 4 PHE G 306 LEU G 311 -1 N GLY G 308 O ALA G 325 SHEET 1 AB2 2 ARG G 450 LEU G 451 0 SHEET 2 AB2 2 PHE G 598 ILE G 599 -1 O ILE G 599 N ARG G 450 SHEET 1 AB3 2 ARG G 563 ASN G 565 0 SHEET 2 AB3 2 SER G 575 SER G 577 -1 O SER G 575 N ASN G 565 SHEET 1 AB4 4 ARG G 778 GLN G 782 0 SHEET 2 AB4 4 GLU G 786 PRO G 792 -1 O GLU G 790 N ARG G 778 SHEET 3 AB4 4 TRP G 604 TYR G 611 -1 N VAL G 607 O LEU G 789 SHEET 4 AB4 4 VAL G 819 GLY G 824 -1 O GLY G 824 N LEU G 606 SHEET 1 AB5 2 TYR G 719 GLU G 721 0 SHEET 2 AB5 2 ARG G 727 TYR G 729 -1 O ARG G 728 N VAL G 720 LINK O3' DC B 111 P 1W5 B 112 1555 1555 1.59 LINK O3' DG D 204 P 1WA D 205 1555 1555 1.59 LINK O3' 1WA D 205 P DG D 206 1555 1555 1.59 LINK O3' DC E 111 P 1W5 E 112 1555 1555 1.59 LINK O3' DG F 204 P 1WA F 205 1555 1555 1.59 LINK O3' 1WA F 205 P DG F 206 1555 1555 1.59 LINK O3' DC H 111 P 1W5 H 112 1555 1555 1.59 LINK O3' DG I 204 P 1WA I 205 1555 1555 1.61 LINK O3' 1WA I 205 P DG I 206 1555 1555 1.36 CISPEP 1 TRP A 299 PRO A 300 0 2.75 CISPEP 2 ASP A 578 PRO A 579 0 -5.76 CISPEP 3 TRP C 299 PRO C 300 0 -0.77 CISPEP 4 ASP C 578 PRO C 579 0 -5.59 CISPEP 5 TRP G 299 PRO G 300 0 3.13 CISPEP 6 ASP G 578 PRO G 579 0 -4.99 CRYST1 199.282 114.611 90.516 90.00 91.88 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005018 0.000000 0.000165 0.00000 SCALE2 0.000000 0.008725 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011054 0.00000