data_5W7N # _entry.id 5W7N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5W7N pdb_00005w7n 10.2210/pdb5w7n/pdb WWPDB D_1000228371 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5W7N _pdbx_database_status.recvd_initial_deposition_date 2017-06-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Fang, Z.' 1 ? 'Yang, F.' 2 ? 'Huang, Z.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title '2-Se-T2/4-modified-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fang, Z.' 1 ? primary 'Yang, F.' 2 ? primary 'Huang, Z.' 3 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 95.95 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5W7N _cell.details ? _cell.formula_units_Z ? _cell.length_a 80.686 _cell.length_a_esd ? _cell.length_b 37.690 _cell.length_b_esd ? _cell.length_c 62.180 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W7N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*UP*CP*GP*AP*CP*A)-3') ; 1875.189 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*(US3)P*GP*(US3)P*CP*G)-3') ; 1950.150 1 ? ? ? ? 3 polymer man 'Ribonuclease H' 15243.206 1 3.1.26.4 D132N 'residues 62-193' ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 water nat water 18.015 48 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'RNase H' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no UCGACA UCGACA B ? 2 polydeoxyribonucleotide no yes '(DA)(US3)(DG)(US3)(DC)(DG)' ATGTCG C ? 3 'polypeptide(L)' no no ;EIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVK DKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADY ; ;EIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVK DKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADY ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 C n 1 3 G n 1 4 A n 1 5 C n 1 6 A n 2 1 DA n 2 2 US3 n 2 3 DG n 2 4 US3 n 2 5 DC n 2 6 DG n 3 1 GLU n 3 2 ILE n 3 3 ILE n 3 4 TRP n 3 5 GLU n 3 6 SER n 3 7 LEU n 3 8 SER n 3 9 VAL n 3 10 ASP n 3 11 VAL n 3 12 GLY n 3 13 SER n 3 14 GLN n 3 15 GLY n 3 16 ASN n 3 17 PRO n 3 18 GLY n 3 19 ILE n 3 20 VAL n 3 21 GLU n 3 22 TYR n 3 23 LYS n 3 24 GLY n 3 25 VAL n 3 26 ASP n 3 27 THR n 3 28 LYS n 3 29 THR n 3 30 GLY n 3 31 GLU n 3 32 VAL n 3 33 LEU n 3 34 PHE n 3 35 GLU n 3 36 ARG n 3 37 GLU n 3 38 PRO n 3 39 ILE n 3 40 PRO n 3 41 ILE n 3 42 GLY n 3 43 THR n 3 44 ASN n 3 45 ASN n 3 46 MET n 3 47 GLY n 3 48 GLU n 3 49 PHE n 3 50 LEU n 3 51 ALA n 3 52 ILE n 3 53 VAL n 3 54 HIS n 3 55 GLY n 3 56 LEU n 3 57 ARG n 3 58 TYR n 3 59 LEU n 3 60 LYS n 3 61 GLU n 3 62 ARG n 3 63 ASN n 3 64 SER n 3 65 ARG n 3 66 LYS n 3 67 PRO n 3 68 ILE n 3 69 TYR n 3 70 SER n 3 71 ASN n 3 72 SER n 3 73 GLN n 3 74 THR n 3 75 ALA n 3 76 ILE n 3 77 LYS n 3 78 TRP n 3 79 VAL n 3 80 LYS n 3 81 ASP n 3 82 LYS n 3 83 LYS n 3 84 ALA n 3 85 LYS n 3 86 SER n 3 87 THR n 3 88 LEU n 3 89 VAL n 3 90 ARG n 3 91 ASN n 3 92 GLU n 3 93 GLU n 3 94 THR n 3 95 ALA n 3 96 LEU n 3 97 ILE n 3 98 TRP n 3 99 LYS n 3 100 LEU n 3 101 VAL n 3 102 ASP n 3 103 GLU n 3 104 ALA n 3 105 GLU n 3 106 GLU n 3 107 TRP n 3 108 LEU n 3 109 ASN n 3 110 THR n 3 111 HIS n 3 112 THR n 3 113 TYR n 3 114 GLU n 3 115 THR n 3 116 PRO n 3 117 ILE n 3 118 LEU n 3 119 LYS n 3 120 TRP n 3 121 GLN n 3 122 THR n 3 123 ASP n 3 124 LYS n 3 125 TRP n 3 126 GLY n 3 127 GLU n 3 128 ILE n 3 129 LYS n 3 130 ALA n 3 131 ASP n 3 132 TYR n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 132 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rnhA, BH0863' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272558 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli K-12' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 83333 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 6 'synthetic construct' ? 32630 ? 2 1 sample 1 6 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5W7N 5W7N ? 1 ? 1 2 PDB 5W7N 5W7N ? 2 ? 1 3 UNP RNH1_BACHD Q9KEI9 ? 3 ;EIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQTAIKWVK DKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADY ; 62 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5W7N B 1 ? 6 ? 5W7N 1 ? 6 ? 1 6 2 2 5W7N C 1 ? 4 ? 5W7N 1 ? 4 ? 1 4 3 3 5W7N A 1 ? 132 ? Q9KEI9 62 ? 193 ? 62 193 # _struct_ref_seq_dif.align_id 3 _struct_ref_seq_dif.pdbx_pdb_id_code 5W7N _struct_ref_seq_dif.mon_id ASN _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 71 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9KEI9 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 132 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 132 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 US3 'DNA linking' n '1-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-5-methyl-2-selanylpyrimidin-4(1H)-one' "2-Se-Thymidine-5'-phosphate" 'C10 H15 N2 O7 P Se' 385.169 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5W7N _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M MES pH 6.5, 12%(w/v) PEG 20000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-05-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5W7N _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 61.85 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17561 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 88.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.784 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.027 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 5.3 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 913 _reflns_shell.percent_possible_all 52.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.784 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.085 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.974 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.01 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.01 _refine.B_iso_max ? _refine.B_iso_mean 21.240 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5W7N _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.80 _refine.ls_d_res_low 50 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14562 _refine.ls_number_reflns_R_free 757 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 87.07 _refine.ls_percent_reflns_R_free 4.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.19433 _refine.ls_R_factor_R_free 0.23201 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19240 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2g8u _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.143 _refine.pdbx_overall_ESU_R_Free 0.136 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.680 _refine.overall_SU_ML 0.084 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1076 _refine_hist.pdbx_number_atoms_nucleic_acid 245 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 48 _refine_hist.number_atoms_total 1371 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.020 0.018 1370 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.034 0.020 1158 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.238 1.844 1896 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.442 3.011 2705 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.105 5.000 131 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.029 25.098 51 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.232 15.000 202 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.779 15.000 5 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.123 0.200 205 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.013 0.020 1334 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 275 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.099 1.849 527 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.075 1.845 526 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.934 2.758 657 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.935 2.761 658 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.309 2.289 843 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.308 2.289 844 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.813 3.321 1240 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.141 22.452 1725 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 6.135 22.390 1720 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.797 _refine_ls_shell.d_res_low 1.843 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.number_reflns_R_work 499 _refine_ls_shell.percent_reflns_obs 41.10 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.322 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.217 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5W7N _struct.title '2-Se-T2/4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5W7N _struct_keywords.text 'HYDROLASE-DNA-RNA complex' _struct_keywords.pdbx_keywords HYDROLASE/DNA/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR C 43 ? ARG C 62 ? THR A 104 ARG A 123 1 ? 20 HELX_P HELX_P2 AA2 SER C 72 ? LYS C 82 ? SER A 133 LYS A 143 1 ? 11 HELX_P HELX_P3 AA3 THR C 94 ? ASN C 109 ? THR A 155 ASN A 170 1 ? 16 HELX_P HELX_P4 AA4 GLN C 121 ? GLY C 126 ? GLN A 182 GLY A 187 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 1 "O3'" ? ? ? 1_555 B US3 2 P ? ? C DA 1 C US3 2 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale2 covale one ? B US3 2 "O3'" ? ? ? 1_555 B DG 3 P ? ? C US3 2 C DG 3 1_555 ? ? ? ? ? ? ? 1.699 ? ? covale3 covale both ? B DG 3 "O3'" ? ? ? 1_555 B US3 4 P ? ? C DG 3 C US3 4 1_555 ? ? ? ? ? ? ? 1.652 ? ? covale4 covale one ? B US3 4 "O3'" ? ? ? 1_555 B DC 5 P ? ? C US3 4 C DC 5 1_555 ? ? ? ? ? ? ? 1.631 ? ? metalc1 metalc ? ? F HOH . O ? ? ? 4_546 D MG . MG ? ? B HOH 104 A MG 201 1_555 ? ? ? ? ? ? ? 2.082 ? ? metalc2 metalc ? ? C ASP 10 OD2 ? ? ? 1_555 D MG . MG ? ? A ASP 71 A MG 201 1_555 ? ? ? ? ? ? ? 2.057 ? ? metalc3 metalc ? ? C ASP 10 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 71 A MG 202 1_555 ? ? ? ? ? ? ? 1.977 ? ? metalc4 metalc ? ? C GLU 48 OE1 ? ? ? 1_555 E MG . MG ? ? A GLU 109 A MG 202 1_555 ? ? ? ? ? ? ? 2.720 ? ? metalc5 metalc ? ? C GLU 48 OE2 ? ? ? 1_555 E MG . MG ? ? A GLU 109 A MG 202 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc6 metalc ? ? C ASN 71 OD1 ? ? ? 1_555 E MG . MG ? ? A ASN 132 A MG 202 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc7 metalc ? ? C ASP 131 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 192 A MG 201 1_555 ? ? ? ? ? ? ? 1.987 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 201 A HOH 303 1_555 ? ? ? ? ? ? ? 2.208 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 201 A HOH 308 1_555 ? ? ? ? ? ? ? 1.867 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 201 A HOH 311 1_555 ? ? ? ? ? ? ? 1.995 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 202 A HOH 305 1_555 ? ? ? ? ? ? ? 2.266 ? ? hydrog1 hydrog ? ? A C 2 N3 ? ? ? 1_555 B DG 6 N1 ? ? B C 2 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 2 N4 ? ? ? 1_555 B DG 6 O6 ? ? B C 2 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 2 O2 ? ? ? 1_555 B DG 6 N2 ? ? B C 2 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 3 N1 ? ? ? 1_555 B DC 5 N3 ? ? B G 3 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 3 N2 ? ? ? 1_555 B DC 5 O2 ? ? B G 3 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 O6 ? ? ? 1_555 B DC 5 N4 ? ? B G 3 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 4 N1 ? ? ? 1_555 B US3 4 N3 ? ? B A 4 C US3 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 4 N6 ? ? ? 1_555 B US3 4 O4 ? ? B A 4 C US3 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 5 N3 ? ? ? 1_555 B DG 3 N1 ? ? B C 5 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 5 N4 ? ? ? 1_555 B DG 3 O6 ? ? B C 5 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 O2 ? ? ? 1_555 B DG 3 N2 ? ? B C 5 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 6 N1 ? ? ? 1_555 B US3 2 N3 ? ? B A 6 C US3 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 6 N6 ? ? ? 1_555 B US3 2 O4 ? ? B A 6 C US3 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 16 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 77 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 17 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 78 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.35 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL C 32 ? GLU C 35 ? VAL A 93 GLU A 96 AA1 2 GLY C 18 ? ASP C 26 ? GLY A 79 ASP A 87 AA1 3 ILE C 39 ? GLY C 42 ? ILE A 100 GLY A 103 AA2 1 VAL C 32 ? GLU C 35 ? VAL A 93 GLU A 96 AA2 2 GLY C 18 ? ASP C 26 ? GLY A 79 ASP A 87 AA2 3 LEU C 7 ? GLN C 14 ? LEU A 68 GLN A 75 AA2 4 ILE C 68 ? SER C 70 ? ILE A 129 SER A 131 AA2 5 ILE C 117 ? LYS C 119 ? ILE A 178 LYS A 180 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU C 33 ? O LEU A 94 N GLY C 24 ? N GLY A 85 AA1 2 3 N VAL C 20 ? N VAL A 81 O ILE C 39 ? O ILE A 100 AA2 1 2 O LEU C 33 ? O LEU A 94 N GLY C 24 ? N GLY A 85 AA2 2 3 O VAL C 25 ? O VAL A 86 N SER C 8 ? N SER A 69 AA2 3 4 N LEU C 7 ? N LEU A 68 O TYR C 69 ? O TYR A 130 AA2 4 5 N ILE C 68 ? N ILE A 129 O LEU C 118 ? O LEU A 179 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 201 ? 6 'binding site for residue MG A 201' AC2 Software A MG 202 ? 6 'binding site for residue MG A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP C 10 ? ASP A 71 . ? 1_555 ? 2 AC1 6 ASP C 131 ? ASP A 192 . ? 1_555 ? 3 AC1 6 HOH H . ? HOH A 303 . ? 1_555 ? 4 AC1 6 HOH H . ? HOH A 308 . ? 1_555 ? 5 AC1 6 HOH H . ? HOH A 311 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH B 104 . ? 4_546 ? 7 AC2 6 ASP C 10 ? ASP A 71 . ? 1_555 ? 8 AC2 6 GLU C 48 ? GLU A 109 . ? 1_555 ? 9 AC2 6 ASN C 71 ? ASN A 132 . ? 1_555 ? 10 AC2 6 HOH H . ? HOH A 303 . ? 1_555 ? 11 AC2 6 HOH H . ? HOH A 305 . ? 1_555 ? 12 AC2 6 A A 6 ? A B 6 . ? 1_555 ? # _atom_sites.entry_id 5W7N _atom_sites.fract_transf_matrix[1][1] 0.012394 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001291 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026532 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016169 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 1 1 U U B . n A 1 2 C 2 2 2 C C B . n A 1 3 G 3 3 3 G G B . n A 1 4 A 4 4 4 A A B . n A 1 5 C 5 5 5 C C B . n A 1 6 A 6 6 6 A A B . n B 2 1 DA 1 1 1 DA DA C . n B 2 2 US3 2 2 2 US3 US3 C . n B 2 3 DG 3 3 3 DG DG C . n B 2 4 US3 4 4 4 US3 US3 C . n B 2 5 DC 5 5 5 DC DC C . n B 2 6 DG 6 6 6 DG DG C . n C 3 1 GLU 1 62 62 GLU GLU A . n C 3 2 ILE 2 63 63 ILE ILE A . n C 3 3 ILE 3 64 64 ILE ILE A . n C 3 4 TRP 4 65 65 TRP TRP A . n C 3 5 GLU 5 66 66 GLU GLU A . n C 3 6 SER 6 67 67 SER SER A . n C 3 7 LEU 7 68 68 LEU LEU A . n C 3 8 SER 8 69 69 SER SER A . n C 3 9 VAL 9 70 70 VAL VAL A . n C 3 10 ASP 10 71 71 ASP ASP A . n C 3 11 VAL 11 72 72 VAL VAL A . n C 3 12 GLY 12 73 73 GLY GLY A . n C 3 13 SER 13 74 74 SER SER A . n C 3 14 GLN 14 75 75 GLN GLN A . n C 3 15 GLY 15 76 76 GLY GLY A . n C 3 16 ASN 16 77 77 ASN ASN A . n C 3 17 PRO 17 78 78 PRO PRO A . n C 3 18 GLY 18 79 79 GLY GLY A . n C 3 19 ILE 19 80 80 ILE ILE A . n C 3 20 VAL 20 81 81 VAL VAL A . n C 3 21 GLU 21 82 82 GLU GLU A . n C 3 22 TYR 22 83 83 TYR TYR A . n C 3 23 LYS 23 84 84 LYS LYS A . n C 3 24 GLY 24 85 85 GLY GLY A . n C 3 25 VAL 25 86 86 VAL VAL A . n C 3 26 ASP 26 87 87 ASP ASP A . n C 3 27 THR 27 88 88 THR THR A . n C 3 28 LYS 28 89 89 LYS LYS A . n C 3 29 THR 29 90 90 THR THR A . n C 3 30 GLY 30 91 91 GLY GLY A . n C 3 31 GLU 31 92 92 GLU GLU A . n C 3 32 VAL 32 93 93 VAL VAL A . n C 3 33 LEU 33 94 94 LEU LEU A . n C 3 34 PHE 34 95 95 PHE PHE A . n C 3 35 GLU 35 96 96 GLU GLU A . n C 3 36 ARG 36 97 97 ARG ARG A . n C 3 37 GLU 37 98 98 GLU GLU A . n C 3 38 PRO 38 99 99 PRO PRO A . n C 3 39 ILE 39 100 100 ILE ILE A . n C 3 40 PRO 40 101 101 PRO PRO A . n C 3 41 ILE 41 102 102 ILE ILE A . n C 3 42 GLY 42 103 103 GLY GLY A . n C 3 43 THR 43 104 104 THR THR A . n C 3 44 ASN 44 105 105 ASN ASN A . n C 3 45 ASN 45 106 106 ASN ASN A . n C 3 46 MET 46 107 107 MET MET A . n C 3 47 GLY 47 108 108 GLY GLY A . n C 3 48 GLU 48 109 109 GLU GLU A . n C 3 49 PHE 49 110 110 PHE PHE A . n C 3 50 LEU 50 111 111 LEU LEU A . n C 3 51 ALA 51 112 112 ALA ALA A . n C 3 52 ILE 52 113 113 ILE ILE A . n C 3 53 VAL 53 114 114 VAL VAL A . n C 3 54 HIS 54 115 115 HIS HIS A . n C 3 55 GLY 55 116 116 GLY GLY A . n C 3 56 LEU 56 117 117 LEU LEU A . n C 3 57 ARG 57 118 118 ARG ARG A . n C 3 58 TYR 58 119 119 TYR TYR A . n C 3 59 LEU 59 120 120 LEU LEU A . n C 3 60 LYS 60 121 121 LYS LYS A . n C 3 61 GLU 61 122 122 GLU GLU A . n C 3 62 ARG 62 123 123 ARG ARG A . n C 3 63 ASN 63 124 124 ASN ASN A . n C 3 64 SER 64 125 125 SER SER A . n C 3 65 ARG 65 126 126 ARG ARG A . n C 3 66 LYS 66 127 127 LYS LYS A . n C 3 67 PRO 67 128 128 PRO PRO A . n C 3 68 ILE 68 129 129 ILE ILE A . n C 3 69 TYR 69 130 130 TYR TYR A . n C 3 70 SER 70 131 131 SER SER A . n C 3 71 ASN 71 132 132 ASN ASN A . n C 3 72 SER 72 133 133 SER SER A . n C 3 73 GLN 73 134 134 GLN GLN A . n C 3 74 THR 74 135 135 THR THR A . n C 3 75 ALA 75 136 136 ALA ALA A . n C 3 76 ILE 76 137 137 ILE ILE A . n C 3 77 LYS 77 138 138 LYS LYS A . n C 3 78 TRP 78 139 139 TRP TRP A . n C 3 79 VAL 79 140 140 VAL VAL A . n C 3 80 LYS 80 141 141 LYS LYS A . n C 3 81 ASP 81 142 142 ASP ASP A . n C 3 82 LYS 82 143 143 LYS LYS A . n C 3 83 LYS 83 144 144 LYS LYS A . n C 3 84 ALA 84 145 145 ALA ALA A . n C 3 85 LYS 85 146 146 LYS LYS A . n C 3 86 SER 86 147 147 SER SER A . n C 3 87 THR 87 148 148 THR THR A . n C 3 88 LEU 88 149 149 LEU LEU A . n C 3 89 VAL 89 150 150 VAL VAL A . n C 3 90 ARG 90 151 151 ARG ARG A . n C 3 91 ASN 91 152 152 ASN ASN A . n C 3 92 GLU 92 153 153 GLU GLU A . n C 3 93 GLU 93 154 154 GLU GLU A . n C 3 94 THR 94 155 155 THR THR A . n C 3 95 ALA 95 156 156 ALA ALA A . n C 3 96 LEU 96 157 157 LEU LEU A . n C 3 97 ILE 97 158 158 ILE ILE A . n C 3 98 TRP 98 159 159 TRP TRP A . n C 3 99 LYS 99 160 160 LYS LYS A . n C 3 100 LEU 100 161 161 LEU LEU A . n C 3 101 VAL 101 162 162 VAL VAL A . n C 3 102 ASP 102 163 163 ASP ASP A . n C 3 103 GLU 103 164 164 GLU GLU A . n C 3 104 ALA 104 165 165 ALA ALA A . n C 3 105 GLU 105 166 166 GLU GLU A . n C 3 106 GLU 106 167 167 GLU GLU A . n C 3 107 TRP 107 168 168 TRP TRP A . n C 3 108 LEU 108 169 169 LEU LEU A . n C 3 109 ASN 109 170 170 ASN ASN A . n C 3 110 THR 110 171 171 THR THR A . n C 3 111 HIS 111 172 172 HIS HIS A . n C 3 112 THR 112 173 173 THR THR A . n C 3 113 TYR 113 174 174 TYR TYR A . n C 3 114 GLU 114 175 175 GLU GLU A . n C 3 115 THR 115 176 176 THR THR A . n C 3 116 PRO 116 177 177 PRO PRO A . n C 3 117 ILE 117 178 178 ILE ILE A . n C 3 118 LEU 118 179 179 LEU LEU A . n C 3 119 LYS 119 180 180 LYS LYS A . n C 3 120 TRP 120 181 181 TRP TRP A . n C 3 121 GLN 121 182 182 GLN GLN A . n C 3 122 THR 122 183 183 THR THR A . n C 3 123 ASP 123 184 184 ASP ASP A . n C 3 124 LYS 124 185 185 LYS LYS A . n C 3 125 TRP 125 186 186 TRP TRP A . n C 3 126 GLY 126 187 187 GLY GLY A . n C 3 127 GLU 127 188 188 GLU GLU A . n C 3 128 ILE 128 189 189 ILE ILE A . n C 3 129 LYS 129 190 190 LYS LYS A . n C 3 130 ALA 130 191 191 ALA ALA A . n C 3 131 ASP 131 192 192 ASP ASP A . n C 3 132 TYR 132 193 193 TYR TYR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 201 1 MG MG A . E 4 MG 1 202 2 MG MG A . F 5 HOH 1 101 45 HOH HOH B . F 5 HOH 2 102 18 HOH HOH B . F 5 HOH 3 103 32 HOH HOH B . F 5 HOH 4 104 36 HOH HOH B . F 5 HOH 5 105 46 HOH HOH B . G 5 HOH 1 101 8 HOH HOH C . G 5 HOH 2 102 30 HOH HOH C . G 5 HOH 3 103 9 HOH HOH C . G 5 HOH 4 104 17 HOH HOH C . G 5 HOH 5 105 11 HOH HOH C . G 5 HOH 6 106 15 HOH HOH C . G 5 HOH 7 107 12 HOH HOH C . G 5 HOH 8 108 16 HOH HOH C . H 5 HOH 1 301 10 HOH HOH A . H 5 HOH 2 302 7 HOH HOH A . H 5 HOH 3 303 2 HOH HOH A . H 5 HOH 4 304 34 HOH HOH A . H 5 HOH 5 305 1 HOH HOH A . H 5 HOH 6 306 38 HOH HOH A . H 5 HOH 7 307 28 HOH HOH A . H 5 HOH 8 308 4 HOH HOH A . H 5 HOH 9 309 40 HOH HOH A . H 5 HOH 10 310 31 HOH HOH A . H 5 HOH 11 311 3 HOH HOH A . H 5 HOH 12 312 33 HOH HOH A . H 5 HOH 13 313 13 HOH HOH A . H 5 HOH 14 314 20 HOH HOH A . H 5 HOH 15 315 37 HOH HOH A . H 5 HOH 16 316 43 HOH HOH A . H 5 HOH 17 317 5 HOH HOH A . H 5 HOH 18 318 26 HOH HOH A . H 5 HOH 19 319 14 HOH HOH A . H 5 HOH 20 320 6 HOH HOH A . H 5 HOH 21 321 19 HOH HOH A . H 5 HOH 22 322 27 HOH HOH A . H 5 HOH 23 323 41 HOH HOH A . H 5 HOH 24 324 23 HOH HOH A . H 5 HOH 25 325 22 HOH HOH A . H 5 HOH 26 326 42 HOH HOH A . H 5 HOH 27 327 44 HOH HOH A . H 5 HOH 28 328 24 HOH HOH A . H 5 HOH 29 329 25 HOH HOH A . H 5 HOH 30 330 47 HOH HOH A . H 5 HOH 31 331 35 HOH HOH A . H 5 HOH 32 332 39 HOH HOH A . H 5 HOH 33 333 21 HOH HOH A . H 5 HOH 34 334 29 HOH HOH A . H 5 HOH 35 335 48 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1910 ? 1 MORE -21 ? 1 'SSA (A^2)' 8610 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? F HOH . ? B HOH 104 ? 4_546 MG ? D MG . ? A MG 201 ? 1_555 OD2 ? C ASP 10 ? A ASP 71 ? 1_555 173.4 ? 2 O ? F HOH . ? B HOH 104 ? 4_546 MG ? D MG . ? A MG 201 ? 1_555 OD1 ? C ASP 131 ? A ASP 192 ? 1_555 93.2 ? 3 OD2 ? C ASP 10 ? A ASP 71 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 OD1 ? C ASP 131 ? A ASP 192 ? 1_555 93.4 ? 4 O ? F HOH . ? B HOH 104 ? 4_546 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 303 ? 1_555 85.1 ? 5 OD2 ? C ASP 10 ? A ASP 71 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 303 ? 1_555 88.6 ? 6 OD1 ? C ASP 131 ? A ASP 192 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 303 ? 1_555 170.0 ? 7 O ? F HOH . ? B HOH 104 ? 4_546 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 308 ? 1_555 85.1 ? 8 OD2 ? C ASP 10 ? A ASP 71 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 308 ? 1_555 93.6 ? 9 OD1 ? C ASP 131 ? A ASP 192 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 308 ? 1_555 96.6 ? 10 O ? H HOH . ? A HOH 303 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 308 ? 1_555 93.0 ? 11 O ? F HOH . ? B HOH 104 ? 4_546 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 311 ? 1_555 97.6 ? 12 OD2 ? C ASP 10 ? A ASP 71 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 311 ? 1_555 82.8 ? 13 OD1 ? C ASP 131 ? A ASP 192 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 311 ? 1_555 91.8 ? 14 O ? H HOH . ? A HOH 303 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 311 ? 1_555 78.8 ? 15 O ? H HOH . ? A HOH 308 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 311 ? 1_555 171.0 ? 16 OD1 ? C ASP 10 ? A ASP 71 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 OE1 ? C GLU 48 ? A GLU 109 ? 1_555 98.2 ? 17 OD1 ? C ASP 10 ? A ASP 71 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 OE2 ? C GLU 48 ? A GLU 109 ? 1_555 101.1 ? 18 OE1 ? C GLU 48 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 OE2 ? C GLU 48 ? A GLU 109 ? 1_555 52.9 ? 19 OD1 ? C ASP 10 ? A ASP 71 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 OD1 ? C ASN 71 ? A ASN 132 ? 1_555 139.8 ? 20 OE1 ? C GLU 48 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 OD1 ? C ASN 71 ? A ASN 132 ? 1_555 122.0 ? 21 OE2 ? C GLU 48 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 OD1 ? C ASN 71 ? A ASN 132 ? 1_555 102.7 ? 22 OD1 ? C ASP 10 ? A ASP 71 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 305 ? 1_555 103.5 ? 23 OE1 ? C GLU 48 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 305 ? 1_555 78.2 ? 24 OE2 ? C GLU 48 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 305 ? 1_555 127.6 ? 25 OD1 ? C ASN 71 ? A ASN 132 ? 1_555 MG ? E MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 305 ? 1_555 86.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-06-28 2 'Structure model' 1 1 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' refine_hist 7 2 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 21 2 'Structure model' '_pdbx_struct_conn_angle.value' 22 2 'Structure model' '_refine_hist.d_res_low' 23 2 'Structure model' '_struct_conn.pdbx_dist_value' 24 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 2 'Structure model' '_struct_conn.ptnr1_symmetry' 32 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 2 'Structure model' '_struct_conn.ptnr2_symmetry' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 C _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 103 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 C _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 106 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P B A 6 ? ? "O5'" B A 6 ? ? 1.524 1.593 -0.069 0.010 N 2 1 "O3'" C US3 2 ? ? P C DG 3 ? ? 1.699 1.607 0.092 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OP1 B A 6 ? ? P B A 6 ? ? OP2 B A 6 ? ? 109.77 119.60 -9.83 1.50 N 2 1 P B A 6 ? ? "O5'" B A 6 ? ? "C5'" B A 6 ? ? 133.00 120.90 12.10 1.60 N 3 1 "C2'" C DA 1 ? ? "C3'" C DA 1 ? ? "O3'" C DA 1 ? ? 92.42 109.40 -16.98 2.50 N 4 1 "C3'" C US3 4 ? ? "O3'" C US3 4 ? ? P C DC 5 ? ? 128.33 119.70 8.63 1.20 Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 DA OP3 O N N 146 DA P P N N 147 DA OP1 O N N 148 DA OP2 O N N 149 DA "O5'" O N N 150 DA "C5'" C N N 151 DA "C4'" C N R 152 DA "O4'" O N N 153 DA "C3'" C N S 154 DA "O3'" O N N 155 DA "C2'" C N N 156 DA "C1'" C N R 157 DA N9 N Y N 158 DA C8 C Y N 159 DA N7 N Y N 160 DA C5 C Y N 161 DA C6 C Y N 162 DA N6 N N N 163 DA N1 N Y N 164 DA C2 C Y N 165 DA N3 N Y N 166 DA C4 C Y N 167 DA HOP3 H N N 168 DA HOP2 H N N 169 DA "H5'" H N N 170 DA "H5''" H N N 171 DA "H4'" H N N 172 DA "H3'" H N N 173 DA "HO3'" H N N 174 DA "H2'" H N N 175 DA "H2''" H N N 176 DA "H1'" H N N 177 DA H8 H N N 178 DA H61 H N N 179 DA H62 H N N 180 DA H2 H N N 181 DC OP3 O N N 182 DC P P N N 183 DC OP1 O N N 184 DC OP2 O N N 185 DC "O5'" O N N 186 DC "C5'" C N N 187 DC "C4'" C N R 188 DC "O4'" O N N 189 DC "C3'" C N S 190 DC "O3'" O N N 191 DC "C2'" C N N 192 DC "C1'" C N R 193 DC N1 N N N 194 DC C2 C N N 195 DC O2 O N N 196 DC N3 N N N 197 DC C4 C N N 198 DC N4 N N N 199 DC C5 C N N 200 DC C6 C N N 201 DC HOP3 H N N 202 DC HOP2 H N N 203 DC "H5'" H N N 204 DC "H5''" H N N 205 DC "H4'" H N N 206 DC "H3'" H N N 207 DC "HO3'" H N N 208 DC "H2'" H N N 209 DC "H2''" H N N 210 DC "H1'" H N N 211 DC H41 H N N 212 DC H42 H N N 213 DC H5 H N N 214 DC H6 H N N 215 DG OP3 O N N 216 DG P P N N 217 DG OP1 O N N 218 DG OP2 O N N 219 DG "O5'" O N N 220 DG "C5'" C N N 221 DG "C4'" C N R 222 DG "O4'" O N N 223 DG "C3'" C N S 224 DG "O3'" O N N 225 DG "C2'" C N N 226 DG "C1'" C N R 227 DG N9 N Y N 228 DG C8 C Y N 229 DG N7 N Y N 230 DG C5 C Y N 231 DG C6 C N N 232 DG O6 O N N 233 DG N1 N N N 234 DG C2 C N N 235 DG N2 N N N 236 DG N3 N N N 237 DG C4 C Y N 238 DG HOP3 H N N 239 DG HOP2 H N N 240 DG "H5'" H N N 241 DG "H5''" H N N 242 DG "H4'" H N N 243 DG "H3'" H N N 244 DG "HO3'" H N N 245 DG "H2'" H N N 246 DG "H2''" H N N 247 DG "H1'" H N N 248 DG H8 H N N 249 DG H1 H N N 250 DG H21 H N N 251 DG H22 H N N 252 G OP3 O N N 253 G P P N N 254 G OP1 O N N 255 G OP2 O N N 256 G "O5'" O N N 257 G "C5'" C N N 258 G "C4'" C N R 259 G "O4'" O N N 260 G "C3'" C N S 261 G "O3'" O N N 262 G "C2'" C N R 263 G "O2'" O N N 264 G "C1'" C N R 265 G N9 N Y N 266 G C8 C Y N 267 G N7 N Y N 268 G C5 C Y N 269 G C6 C N N 270 G O6 O N N 271 G N1 N N N 272 G C2 C N N 273 G N2 N N N 274 G N3 N N N 275 G C4 C Y N 276 G HOP3 H N N 277 G HOP2 H N N 278 G "H5'" H N N 279 G "H5''" H N N 280 G "H4'" H N N 281 G "H3'" H N N 282 G "HO3'" H N N 283 G "H2'" H N N 284 G "HO2'" H N N 285 G "H1'" H N N 286 G H8 H N N 287 G H1 H N N 288 G H21 H N N 289 G H22 H N N 290 GLN N N N N 291 GLN CA C N S 292 GLN C C N N 293 GLN O O N N 294 GLN CB C N N 295 GLN CG C N N 296 GLN CD C N N 297 GLN OE1 O N N 298 GLN NE2 N N N 299 GLN OXT O N N 300 GLN H H N N 301 GLN H2 H N N 302 GLN HA H N N 303 GLN HB2 H N N 304 GLN HB3 H N N 305 GLN HG2 H N N 306 GLN HG3 H N N 307 GLN HE21 H N N 308 GLN HE22 H N N 309 GLN HXT H N N 310 GLU N N N N 311 GLU CA C N S 312 GLU C C N N 313 GLU O O N N 314 GLU CB C N N 315 GLU CG C N N 316 GLU CD C N N 317 GLU OE1 O N N 318 GLU OE2 O N N 319 GLU OXT O N N 320 GLU H H N N 321 GLU H2 H N N 322 GLU HA H N N 323 GLU HB2 H N N 324 GLU HB3 H N N 325 GLU HG2 H N N 326 GLU HG3 H N N 327 GLU HE2 H N N 328 GLU HXT H N N 329 GLY N N N N 330 GLY CA C N N 331 GLY C C N N 332 GLY O O N N 333 GLY OXT O N N 334 GLY H H N N 335 GLY H2 H N N 336 GLY HA2 H N N 337 GLY HA3 H N N 338 GLY HXT H N N 339 HIS N N N N 340 HIS CA C N S 341 HIS C C N N 342 HIS O O N N 343 HIS CB C N N 344 HIS CG C Y N 345 HIS ND1 N Y N 346 HIS CD2 C Y N 347 HIS CE1 C Y N 348 HIS NE2 N Y N 349 HIS OXT O N N 350 HIS H H N N 351 HIS H2 H N N 352 HIS HA H N N 353 HIS HB2 H N N 354 HIS HB3 H N N 355 HIS HD1 H N N 356 HIS HD2 H N N 357 HIS HE1 H N N 358 HIS HE2 H N N 359 HIS HXT H N N 360 HOH O O N N 361 HOH H1 H N N 362 HOH H2 H N N 363 ILE N N N N 364 ILE CA C N S 365 ILE C C N N 366 ILE O O N N 367 ILE CB C N S 368 ILE CG1 C N N 369 ILE CG2 C N N 370 ILE CD1 C N N 371 ILE OXT O N N 372 ILE H H N N 373 ILE H2 H N N 374 ILE HA H N N 375 ILE HB H N N 376 ILE HG12 H N N 377 ILE HG13 H N N 378 ILE HG21 H N N 379 ILE HG22 H N N 380 ILE HG23 H N N 381 ILE HD11 H N N 382 ILE HD12 H N N 383 ILE HD13 H N N 384 ILE HXT H N N 385 LEU N N N N 386 LEU CA C N S 387 LEU C C N N 388 LEU O O N N 389 LEU CB C N N 390 LEU CG C N N 391 LEU CD1 C N N 392 LEU CD2 C N N 393 LEU OXT O N N 394 LEU H H N N 395 LEU H2 H N N 396 LEU HA H N N 397 LEU HB2 H N N 398 LEU HB3 H N N 399 LEU HG H N N 400 LEU HD11 H N N 401 LEU HD12 H N N 402 LEU HD13 H N N 403 LEU HD21 H N N 404 LEU HD22 H N N 405 LEU HD23 H N N 406 LEU HXT H N N 407 LYS N N N N 408 LYS CA C N S 409 LYS C C N N 410 LYS O O N N 411 LYS CB C N N 412 LYS CG C N N 413 LYS CD C N N 414 LYS CE C N N 415 LYS NZ N N N 416 LYS OXT O N N 417 LYS H H N N 418 LYS H2 H N N 419 LYS HA H N N 420 LYS HB2 H N N 421 LYS HB3 H N N 422 LYS HG2 H N N 423 LYS HG3 H N N 424 LYS HD2 H N N 425 LYS HD3 H N N 426 LYS HE2 H N N 427 LYS HE3 H N N 428 LYS HZ1 H N N 429 LYS HZ2 H N N 430 LYS HZ3 H N N 431 LYS HXT H N N 432 MET N N N N 433 MET CA C N S 434 MET C C N N 435 MET O O N N 436 MET CB C N N 437 MET CG C N N 438 MET SD S N N 439 MET CE C N N 440 MET OXT O N N 441 MET H H N N 442 MET H2 H N N 443 MET HA H N N 444 MET HB2 H N N 445 MET HB3 H N N 446 MET HG2 H N N 447 MET HG3 H N N 448 MET HE1 H N N 449 MET HE2 H N N 450 MET HE3 H N N 451 MET HXT H N N 452 MG MG MG N N 453 PHE N N N N 454 PHE CA C N S 455 PHE C C N N 456 PHE O O N N 457 PHE CB C N N 458 PHE CG C Y N 459 PHE CD1 C Y N 460 PHE CD2 C Y N 461 PHE CE1 C Y N 462 PHE CE2 C Y N 463 PHE CZ C Y N 464 PHE OXT O N N 465 PHE H H N N 466 PHE H2 H N N 467 PHE HA H N N 468 PHE HB2 H N N 469 PHE HB3 H N N 470 PHE HD1 H N N 471 PHE HD2 H N N 472 PHE HE1 H N N 473 PHE HE2 H N N 474 PHE HZ H N N 475 PHE HXT H N N 476 PRO N N N N 477 PRO CA C N S 478 PRO C C N N 479 PRO O O N N 480 PRO CB C N N 481 PRO CG C N N 482 PRO CD C N N 483 PRO OXT O N N 484 PRO H H N N 485 PRO HA H N N 486 PRO HB2 H N N 487 PRO HB3 H N N 488 PRO HG2 H N N 489 PRO HG3 H N N 490 PRO HD2 H N N 491 PRO HD3 H N N 492 PRO HXT H N N 493 SER N N N N 494 SER CA C N S 495 SER C C N N 496 SER O O N N 497 SER CB C N N 498 SER OG O N N 499 SER OXT O N N 500 SER H H N N 501 SER H2 H N N 502 SER HA H N N 503 SER HB2 H N N 504 SER HB3 H N N 505 SER HG H N N 506 SER HXT H N N 507 THR N N N N 508 THR CA C N S 509 THR C C N N 510 THR O O N N 511 THR CB C N R 512 THR OG1 O N N 513 THR CG2 C N N 514 THR OXT O N N 515 THR H H N N 516 THR H2 H N N 517 THR HA H N N 518 THR HB H N N 519 THR HG1 H N N 520 THR HG21 H N N 521 THR HG22 H N N 522 THR HG23 H N N 523 THR HXT H N N 524 TRP N N N N 525 TRP CA C N S 526 TRP C C N N 527 TRP O O N N 528 TRP CB C N N 529 TRP CG C Y N 530 TRP CD1 C Y N 531 TRP CD2 C Y N 532 TRP NE1 N Y N 533 TRP CE2 C Y N 534 TRP CE3 C Y N 535 TRP CZ2 C Y N 536 TRP CZ3 C Y N 537 TRP CH2 C Y N 538 TRP OXT O N N 539 TRP H H N N 540 TRP H2 H N N 541 TRP HA H N N 542 TRP HB2 H N N 543 TRP HB3 H N N 544 TRP HD1 H N N 545 TRP HE1 H N N 546 TRP HE3 H N N 547 TRP HZ2 H N N 548 TRP HZ3 H N N 549 TRP HH2 H N N 550 TRP HXT H N N 551 TYR N N N N 552 TYR CA C N S 553 TYR C C N N 554 TYR O O N N 555 TYR CB C N N 556 TYR CG C Y N 557 TYR CD1 C Y N 558 TYR CD2 C Y N 559 TYR CE1 C Y N 560 TYR CE2 C Y N 561 TYR CZ C Y N 562 TYR OH O N N 563 TYR OXT O N N 564 TYR H H N N 565 TYR H2 H N N 566 TYR HA H N N 567 TYR HB2 H N N 568 TYR HB3 H N N 569 TYR HD1 H N N 570 TYR HD2 H N N 571 TYR HE1 H N N 572 TYR HE2 H N N 573 TYR HH H N N 574 TYR HXT H N N 575 U OP3 O N N 576 U P P N N 577 U OP1 O N N 578 U OP2 O N N 579 U "O5'" O N N 580 U "C5'" C N N 581 U "C4'" C N R 582 U "O4'" O N N 583 U "C3'" C N S 584 U "O3'" O N N 585 U "C2'" C N R 586 U "O2'" O N N 587 U "C1'" C N R 588 U N1 N N N 589 U C2 C N N 590 U O2 O N N 591 U N3 N N N 592 U C4 C N N 593 U O4 O N N 594 U C5 C N N 595 U C6 C N N 596 U HOP3 H N N 597 U HOP2 H N N 598 U "H5'" H N N 599 U "H5''" H N N 600 U "H4'" H N N 601 U "H3'" H N N 602 U "HO3'" H N N 603 U "H2'" H N N 604 U "HO2'" H N N 605 U "H1'" H N N 606 U H3 H N N 607 U H5 H N N 608 U H6 H N N 609 US3 P P N N 610 US3 N1 N N N 611 US3 C2 C N N 612 US3 SE2 SE N N 613 US3 N3 N N N 614 US3 C4 C N N 615 US3 O4 O N N 616 US3 C5 C N N 617 US3 C6 C N N 618 US3 "C1'" C N R 619 US3 OP3 O N N 620 US3 "C2'" C N N 621 US3 OP2 O N N 622 US3 "C3'" C N S 623 US3 "O3'" O N N 624 US3 "C4'" C N R 625 US3 "O4'" O N N 626 US3 "C5'" C N N 627 US3 "O5'" O N N 628 US3 C5A C N N 629 US3 H6 H N N 630 US3 "H1'" H N N 631 US3 HOP3 H N N 632 US3 "H2'" H N N 633 US3 "H2'A" H N N 634 US3 HOP2 H N N 635 US3 "H3'" H N N 636 US3 "HO3'" H N N 637 US3 "H4'" H N N 638 US3 "H5'" H N N 639 US3 "H5'A" H N N 640 US3 H5A H N N 641 US3 H5AA H N N 642 US3 H5AB H N N 643 US3 HSE2 H N N 644 US3 OP1 O N N 645 VAL N N N N 646 VAL CA C N S 647 VAL C C N N 648 VAL O O N N 649 VAL CB C N N 650 VAL CG1 C N N 651 VAL CG2 C N N 652 VAL OXT O N N 653 VAL H H N N 654 VAL H2 H N N 655 VAL HA H N N 656 VAL HB H N N 657 VAL HG11 H N N 658 VAL HG12 H N N 659 VAL HG13 H N N 660 VAL HG21 H N N 661 VAL HG22 H N N 662 VAL HG23 H N N 663 VAL HXT H N N 664 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 DA OP3 P sing N N 145 DA OP3 HOP3 sing N N 146 DA P OP1 doub N N 147 DA P OP2 sing N N 148 DA P "O5'" sing N N 149 DA OP2 HOP2 sing N N 150 DA "O5'" "C5'" sing N N 151 DA "C5'" "C4'" sing N N 152 DA "C5'" "H5'" sing N N 153 DA "C5'" "H5''" sing N N 154 DA "C4'" "O4'" sing N N 155 DA "C4'" "C3'" sing N N 156 DA "C4'" "H4'" sing N N 157 DA "O4'" "C1'" sing N N 158 DA "C3'" "O3'" sing N N 159 DA "C3'" "C2'" sing N N 160 DA "C3'" "H3'" sing N N 161 DA "O3'" "HO3'" sing N N 162 DA "C2'" "C1'" sing N N 163 DA "C2'" "H2'" sing N N 164 DA "C2'" "H2''" sing N N 165 DA "C1'" N9 sing N N 166 DA "C1'" "H1'" sing N N 167 DA N9 C8 sing Y N 168 DA N9 C4 sing Y N 169 DA C8 N7 doub Y N 170 DA C8 H8 sing N N 171 DA N7 C5 sing Y N 172 DA C5 C6 sing Y N 173 DA C5 C4 doub Y N 174 DA C6 N6 sing N N 175 DA C6 N1 doub Y N 176 DA N6 H61 sing N N 177 DA N6 H62 sing N N 178 DA N1 C2 sing Y N 179 DA C2 N3 doub Y N 180 DA C2 H2 sing N N 181 DA N3 C4 sing Y N 182 DC OP3 P sing N N 183 DC OP3 HOP3 sing N N 184 DC P OP1 doub N N 185 DC P OP2 sing N N 186 DC P "O5'" sing N N 187 DC OP2 HOP2 sing N N 188 DC "O5'" "C5'" sing N N 189 DC "C5'" "C4'" sing N N 190 DC "C5'" "H5'" sing N N 191 DC "C5'" "H5''" sing N N 192 DC "C4'" "O4'" sing N N 193 DC "C4'" "C3'" sing N N 194 DC "C4'" "H4'" sing N N 195 DC "O4'" "C1'" sing N N 196 DC "C3'" "O3'" sing N N 197 DC "C3'" "C2'" sing N N 198 DC "C3'" "H3'" sing N N 199 DC "O3'" "HO3'" sing N N 200 DC "C2'" "C1'" sing N N 201 DC "C2'" "H2'" sing N N 202 DC "C2'" "H2''" sing N N 203 DC "C1'" N1 sing N N 204 DC "C1'" "H1'" sing N N 205 DC N1 C2 sing N N 206 DC N1 C6 sing N N 207 DC C2 O2 doub N N 208 DC C2 N3 sing N N 209 DC N3 C4 doub N N 210 DC C4 N4 sing N N 211 DC C4 C5 sing N N 212 DC N4 H41 sing N N 213 DC N4 H42 sing N N 214 DC C5 C6 doub N N 215 DC C5 H5 sing N N 216 DC C6 H6 sing N N 217 DG OP3 P sing N N 218 DG OP3 HOP3 sing N N 219 DG P OP1 doub N N 220 DG P OP2 sing N N 221 DG P "O5'" sing N N 222 DG OP2 HOP2 sing N N 223 DG "O5'" "C5'" sing N N 224 DG "C5'" "C4'" sing N N 225 DG "C5'" "H5'" sing N N 226 DG "C5'" "H5''" sing N N 227 DG "C4'" "O4'" sing N N 228 DG "C4'" "C3'" sing N N 229 DG "C4'" "H4'" sing N N 230 DG "O4'" "C1'" sing N N 231 DG "C3'" "O3'" sing N N 232 DG "C3'" "C2'" sing N N 233 DG "C3'" "H3'" sing N N 234 DG "O3'" "HO3'" sing N N 235 DG "C2'" "C1'" sing N N 236 DG "C2'" "H2'" sing N N 237 DG "C2'" "H2''" sing N N 238 DG "C1'" N9 sing N N 239 DG "C1'" "H1'" sing N N 240 DG N9 C8 sing Y N 241 DG N9 C4 sing Y N 242 DG C8 N7 doub Y N 243 DG C8 H8 sing N N 244 DG N7 C5 sing Y N 245 DG C5 C6 sing N N 246 DG C5 C4 doub Y N 247 DG C6 O6 doub N N 248 DG C6 N1 sing N N 249 DG N1 C2 sing N N 250 DG N1 H1 sing N N 251 DG C2 N2 sing N N 252 DG C2 N3 doub N N 253 DG N2 H21 sing N N 254 DG N2 H22 sing N N 255 DG N3 C4 sing N N 256 G OP3 P sing N N 257 G OP3 HOP3 sing N N 258 G P OP1 doub N N 259 G P OP2 sing N N 260 G P "O5'" sing N N 261 G OP2 HOP2 sing N N 262 G "O5'" "C5'" sing N N 263 G "C5'" "C4'" sing N N 264 G "C5'" "H5'" sing N N 265 G "C5'" "H5''" sing N N 266 G "C4'" "O4'" sing N N 267 G "C4'" "C3'" sing N N 268 G "C4'" "H4'" sing N N 269 G "O4'" "C1'" sing N N 270 G "C3'" "O3'" sing N N 271 G "C3'" "C2'" sing N N 272 G "C3'" "H3'" sing N N 273 G "O3'" "HO3'" sing N N 274 G "C2'" "O2'" sing N N 275 G "C2'" "C1'" sing N N 276 G "C2'" "H2'" sing N N 277 G "O2'" "HO2'" sing N N 278 G "C1'" N9 sing N N 279 G "C1'" "H1'" sing N N 280 G N9 C8 sing Y N 281 G N9 C4 sing Y N 282 G C8 N7 doub Y N 283 G C8 H8 sing N N 284 G N7 C5 sing Y N 285 G C5 C6 sing N N 286 G C5 C4 doub Y N 287 G C6 O6 doub N N 288 G C6 N1 sing N N 289 G N1 C2 sing N N 290 G N1 H1 sing N N 291 G C2 N2 sing N N 292 G C2 N3 doub N N 293 G N2 H21 sing N N 294 G N2 H22 sing N N 295 G N3 C4 sing N N 296 GLN N CA sing N N 297 GLN N H sing N N 298 GLN N H2 sing N N 299 GLN CA C sing N N 300 GLN CA CB sing N N 301 GLN CA HA sing N N 302 GLN C O doub N N 303 GLN C OXT sing N N 304 GLN CB CG sing N N 305 GLN CB HB2 sing N N 306 GLN CB HB3 sing N N 307 GLN CG CD sing N N 308 GLN CG HG2 sing N N 309 GLN CG HG3 sing N N 310 GLN CD OE1 doub N N 311 GLN CD NE2 sing N N 312 GLN NE2 HE21 sing N N 313 GLN NE2 HE22 sing N N 314 GLN OXT HXT sing N N 315 GLU N CA sing N N 316 GLU N H sing N N 317 GLU N H2 sing N N 318 GLU CA C sing N N 319 GLU CA CB sing N N 320 GLU CA HA sing N N 321 GLU C O doub N N 322 GLU C OXT sing N N 323 GLU CB CG sing N N 324 GLU CB HB2 sing N N 325 GLU CB HB3 sing N N 326 GLU CG CD sing N N 327 GLU CG HG2 sing N N 328 GLU CG HG3 sing N N 329 GLU CD OE1 doub N N 330 GLU CD OE2 sing N N 331 GLU OE2 HE2 sing N N 332 GLU OXT HXT sing N N 333 GLY N CA sing N N 334 GLY N H sing N N 335 GLY N H2 sing N N 336 GLY CA C sing N N 337 GLY CA HA2 sing N N 338 GLY CA HA3 sing N N 339 GLY C O doub N N 340 GLY C OXT sing N N 341 GLY OXT HXT sing N N 342 HIS N CA sing N N 343 HIS N H sing N N 344 HIS N H2 sing N N 345 HIS CA C sing N N 346 HIS CA CB sing N N 347 HIS CA HA sing N N 348 HIS C O doub N N 349 HIS C OXT sing N N 350 HIS CB CG sing N N 351 HIS CB HB2 sing N N 352 HIS CB HB3 sing N N 353 HIS CG ND1 sing Y N 354 HIS CG CD2 doub Y N 355 HIS ND1 CE1 doub Y N 356 HIS ND1 HD1 sing N N 357 HIS CD2 NE2 sing Y N 358 HIS CD2 HD2 sing N N 359 HIS CE1 NE2 sing Y N 360 HIS CE1 HE1 sing N N 361 HIS NE2 HE2 sing N N 362 HIS OXT HXT sing N N 363 HOH O H1 sing N N 364 HOH O H2 sing N N 365 ILE N CA sing N N 366 ILE N H sing N N 367 ILE N H2 sing N N 368 ILE CA C sing N N 369 ILE CA CB sing N N 370 ILE CA HA sing N N 371 ILE C O doub N N 372 ILE C OXT sing N N 373 ILE CB CG1 sing N N 374 ILE CB CG2 sing N N 375 ILE CB HB sing N N 376 ILE CG1 CD1 sing N N 377 ILE CG1 HG12 sing N N 378 ILE CG1 HG13 sing N N 379 ILE CG2 HG21 sing N N 380 ILE CG2 HG22 sing N N 381 ILE CG2 HG23 sing N N 382 ILE CD1 HD11 sing N N 383 ILE CD1 HD12 sing N N 384 ILE CD1 HD13 sing N N 385 ILE OXT HXT sing N N 386 LEU N CA sing N N 387 LEU N H sing N N 388 LEU N H2 sing N N 389 LEU CA C sing N N 390 LEU CA CB sing N N 391 LEU CA HA sing N N 392 LEU C O doub N N 393 LEU C OXT sing N N 394 LEU CB CG sing N N 395 LEU CB HB2 sing N N 396 LEU CB HB3 sing N N 397 LEU CG CD1 sing N N 398 LEU CG CD2 sing N N 399 LEU CG HG sing N N 400 LEU CD1 HD11 sing N N 401 LEU CD1 HD12 sing N N 402 LEU CD1 HD13 sing N N 403 LEU CD2 HD21 sing N N 404 LEU CD2 HD22 sing N N 405 LEU CD2 HD23 sing N N 406 LEU OXT HXT sing N N 407 LYS N CA sing N N 408 LYS N H sing N N 409 LYS N H2 sing N N 410 LYS CA C sing N N 411 LYS CA CB sing N N 412 LYS CA HA sing N N 413 LYS C O doub N N 414 LYS C OXT sing N N 415 LYS CB CG sing N N 416 LYS CB HB2 sing N N 417 LYS CB HB3 sing N N 418 LYS CG CD sing N N 419 LYS CG HG2 sing N N 420 LYS CG HG3 sing N N 421 LYS CD CE sing N N 422 LYS CD HD2 sing N N 423 LYS CD HD3 sing N N 424 LYS CE NZ sing N N 425 LYS CE HE2 sing N N 426 LYS CE HE3 sing N N 427 LYS NZ HZ1 sing N N 428 LYS NZ HZ2 sing N N 429 LYS NZ HZ3 sing N N 430 LYS OXT HXT sing N N 431 MET N CA sing N N 432 MET N H sing N N 433 MET N H2 sing N N 434 MET CA C sing N N 435 MET CA CB sing N N 436 MET CA HA sing N N 437 MET C O doub N N 438 MET C OXT sing N N 439 MET CB CG sing N N 440 MET CB HB2 sing N N 441 MET CB HB3 sing N N 442 MET CG SD sing N N 443 MET CG HG2 sing N N 444 MET CG HG3 sing N N 445 MET SD CE sing N N 446 MET CE HE1 sing N N 447 MET CE HE2 sing N N 448 MET CE HE3 sing N N 449 MET OXT HXT sing N N 450 PHE N CA sing N N 451 PHE N H sing N N 452 PHE N H2 sing N N 453 PHE CA C sing N N 454 PHE CA CB sing N N 455 PHE CA HA sing N N 456 PHE C O doub N N 457 PHE C OXT sing N N 458 PHE CB CG sing N N 459 PHE CB HB2 sing N N 460 PHE CB HB3 sing N N 461 PHE CG CD1 doub Y N 462 PHE CG CD2 sing Y N 463 PHE CD1 CE1 sing Y N 464 PHE CD1 HD1 sing N N 465 PHE CD2 CE2 doub Y N 466 PHE CD2 HD2 sing N N 467 PHE CE1 CZ doub Y N 468 PHE CE1 HE1 sing N N 469 PHE CE2 CZ sing Y N 470 PHE CE2 HE2 sing N N 471 PHE CZ HZ sing N N 472 PHE OXT HXT sing N N 473 PRO N CA sing N N 474 PRO N CD sing N N 475 PRO N H sing N N 476 PRO CA C sing N N 477 PRO CA CB sing N N 478 PRO CA HA sing N N 479 PRO C O doub N N 480 PRO C OXT sing N N 481 PRO CB CG sing N N 482 PRO CB HB2 sing N N 483 PRO CB HB3 sing N N 484 PRO CG CD sing N N 485 PRO CG HG2 sing N N 486 PRO CG HG3 sing N N 487 PRO CD HD2 sing N N 488 PRO CD HD3 sing N N 489 PRO OXT HXT sing N N 490 SER N CA sing N N 491 SER N H sing N N 492 SER N H2 sing N N 493 SER CA C sing N N 494 SER CA CB sing N N 495 SER CA HA sing N N 496 SER C O doub N N 497 SER C OXT sing N N 498 SER CB OG sing N N 499 SER CB HB2 sing N N 500 SER CB HB3 sing N N 501 SER OG HG sing N N 502 SER OXT HXT sing N N 503 THR N CA sing N N 504 THR N H sing N N 505 THR N H2 sing N N 506 THR CA C sing N N 507 THR CA CB sing N N 508 THR CA HA sing N N 509 THR C O doub N N 510 THR C OXT sing N N 511 THR CB OG1 sing N N 512 THR CB CG2 sing N N 513 THR CB HB sing N N 514 THR OG1 HG1 sing N N 515 THR CG2 HG21 sing N N 516 THR CG2 HG22 sing N N 517 THR CG2 HG23 sing N N 518 THR OXT HXT sing N N 519 TRP N CA sing N N 520 TRP N H sing N N 521 TRP N H2 sing N N 522 TRP CA C sing N N 523 TRP CA CB sing N N 524 TRP CA HA sing N N 525 TRP C O doub N N 526 TRP C OXT sing N N 527 TRP CB CG sing N N 528 TRP CB HB2 sing N N 529 TRP CB HB3 sing N N 530 TRP CG CD1 doub Y N 531 TRP CG CD2 sing Y N 532 TRP CD1 NE1 sing Y N 533 TRP CD1 HD1 sing N N 534 TRP CD2 CE2 doub Y N 535 TRP CD2 CE3 sing Y N 536 TRP NE1 CE2 sing Y N 537 TRP NE1 HE1 sing N N 538 TRP CE2 CZ2 sing Y N 539 TRP CE3 CZ3 doub Y N 540 TRP CE3 HE3 sing N N 541 TRP CZ2 CH2 doub Y N 542 TRP CZ2 HZ2 sing N N 543 TRP CZ3 CH2 sing Y N 544 TRP CZ3 HZ3 sing N N 545 TRP CH2 HH2 sing N N 546 TRP OXT HXT sing N N 547 TYR N CA sing N N 548 TYR N H sing N N 549 TYR N H2 sing N N 550 TYR CA C sing N N 551 TYR CA CB sing N N 552 TYR CA HA sing N N 553 TYR C O doub N N 554 TYR C OXT sing N N 555 TYR CB CG sing N N 556 TYR CB HB2 sing N N 557 TYR CB HB3 sing N N 558 TYR CG CD1 doub Y N 559 TYR CG CD2 sing Y N 560 TYR CD1 CE1 sing Y N 561 TYR CD1 HD1 sing N N 562 TYR CD2 CE2 doub Y N 563 TYR CD2 HD2 sing N N 564 TYR CE1 CZ doub Y N 565 TYR CE1 HE1 sing N N 566 TYR CE2 CZ sing Y N 567 TYR CE2 HE2 sing N N 568 TYR CZ OH sing N N 569 TYR OH HH sing N N 570 TYR OXT HXT sing N N 571 U OP3 P sing N N 572 U OP3 HOP3 sing N N 573 U P OP1 doub N N 574 U P OP2 sing N N 575 U P "O5'" sing N N 576 U OP2 HOP2 sing N N 577 U "O5'" "C5'" sing N N 578 U "C5'" "C4'" sing N N 579 U "C5'" "H5'" sing N N 580 U "C5'" "H5''" sing N N 581 U "C4'" "O4'" sing N N 582 U "C4'" "C3'" sing N N 583 U "C4'" "H4'" sing N N 584 U "O4'" "C1'" sing N N 585 U "C3'" "O3'" sing N N 586 U "C3'" "C2'" sing N N 587 U "C3'" "H3'" sing N N 588 U "O3'" "HO3'" sing N N 589 U "C2'" "O2'" sing N N 590 U "C2'" "C1'" sing N N 591 U "C2'" "H2'" sing N N 592 U "O2'" "HO2'" sing N N 593 U "C1'" N1 sing N N 594 U "C1'" "H1'" sing N N 595 U N1 C2 sing N N 596 U N1 C6 sing N N 597 U C2 O2 doub N N 598 U C2 N3 sing N N 599 U N3 C4 sing N N 600 U N3 H3 sing N N 601 U C4 O4 doub N N 602 U C4 C5 sing N N 603 U C5 C6 doub N N 604 U C5 H5 sing N N 605 U C6 H6 sing N N 606 US3 P OP2 sing N N 607 US3 N1 "C1'" sing N N 608 US3 N1 C6 sing N N 609 US3 C2 N1 sing N N 610 US3 C2 N3 doub N N 611 US3 SE2 C2 sing N N 612 US3 SE2 HSE2 sing N N 613 US3 N3 C4 sing N N 614 US3 C4 O4 doub N N 615 US3 C4 C5 sing N N 616 US3 C5 C5A sing N N 617 US3 C6 C5 doub N N 618 US3 C6 H6 sing N N 619 US3 "C1'" "O4'" sing N N 620 US3 "C1'" "H1'" sing N N 621 US3 OP3 P sing N N 622 US3 OP3 HOP3 sing N N 623 US3 "C2'" "C1'" sing N N 624 US3 "C2'" "C3'" sing N N 625 US3 "C2'" "H2'" sing N N 626 US3 "C2'" "H2'A" sing N N 627 US3 OP2 HOP2 sing N N 628 US3 "C3'" "C4'" sing N N 629 US3 "C3'" "H3'" sing N N 630 US3 "O3'" "C3'" sing N N 631 US3 "O3'" "HO3'" sing N N 632 US3 "C4'" "O4'" sing N N 633 US3 "C4'" "C5'" sing N N 634 US3 "C4'" "H4'" sing N N 635 US3 "C5'" "O5'" sing N N 636 US3 "C5'" "H5'" sing N N 637 US3 "C5'" "H5'A" sing N N 638 US3 "O5'" P sing N N 639 US3 C5A H5A sing N N 640 US3 C5A H5AA sing N N 641 US3 C5A H5AB sing N N 642 US3 P OP1 doub N N 643 VAL N CA sing N N 644 VAL N H sing N N 645 VAL N H2 sing N N 646 VAL CA C sing N N 647 VAL CA CB sing N N 648 VAL CA HA sing N N 649 VAL C O doub N N 650 VAL C OXT sing N N 651 VAL CB CG1 sing N N 652 VAL CB CG2 sing N N 653 VAL CB HB sing N N 654 VAL CG1 HG11 sing N N 655 VAL CG1 HG12 sing N N 656 VAL CG1 HG13 sing N N 657 VAL CG2 HG21 sing N N 658 VAL CG2 HG22 sing N N 659 VAL CG2 HG23 sing N N 660 VAL OXT HXT sing N N 661 # _ndb_struct_conf_na.entry_id 5W7N _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 2 1_555 B DG 6 1_555 0.008 -0.121 0.030 4.245 -11.493 -2.466 1 B_C2:DG6_C B 2 ? C 6 ? 19 1 1 A G 3 1_555 B DC 5 1_555 -0.269 -0.106 -0.439 -20.322 -11.869 -0.310 2 B_G3:DC5_C B 3 ? C 5 ? 19 1 1 A A 4 1_555 B US3 4 1_555 0.146 -0.071 -0.081 -9.506 -18.133 -0.097 3 B_A4:US34_C B 4 ? C 4 ? 20 1 1 A C 5 1_555 B DG 3 1_555 0.234 -0.132 0.359 -11.809 -12.399 -1.110 4 B_C5:DG3_C B 5 ? C 3 ? 19 1 1 A A 6 1_555 B US3 2 1_555 0.068 -0.105 0.080 2.737 -5.719 -5.536 5 B_A6:US32_C B 6 ? C 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 2 1_555 B DG 6 1_555 A G 3 1_555 B DC 5 1_555 0.389 -1.137 3.896 7.236 6.388 36.612 -2.721 0.494 3.662 9.958 -11.279 37.820 1 BB_C2G3:DC5DG6_CC B 2 ? C 6 ? B 3 ? C 5 ? 1 A G 3 1_555 B DC 5 1_555 A A 4 1_555 B US3 4 1_555 0.557 -0.935 3.109 -0.589 6.062 34.003 -2.442 -1.022 2.895 10.263 0.997 34.528 2 BB_G3A4:US34DC5_CC B 3 ? C 5 ? B 4 ? C 4 ? 1 A A 4 1_555 B US3 4 1_555 A C 5 1_555 B DG 3 1_555 -0.930 -1.152 3.321 -2.471 9.199 30.829 -3.676 1.246 2.929 16.808 4.514 32.233 3 BB_A4C5:DG3US34_CC B 4 ? C 4 ? B 5 ? C 3 ? 1 A C 5 1_555 B DG 3 1_555 A A 6 1_555 B US3 2 1_555 1.414 -1.265 3.043 5.411 4.608 19.607 -5.364 -1.713 2.951 12.992 -15.257 20.844 4 BB_C5A6:US32DG3_CC B 5 ? C 3 ? B 6 ? C 2 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2G8U _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #