data_5W7V
# 
_entry.id   5W7V 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   5W7V         pdb_00005w7v 10.2210/pdb5w7v/pdb 
WWPDB D_1000228525 ?            ?                   
EMDB  EMD-8781     ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2018-03-14 
2 'Structure model' 1 1 2018-03-28 
3 'Structure model' 1 2 2018-04-18 
4 'Structure model' 1 3 2018-07-18 
5 'Structure model' 1 4 2020-01-01 
6 'Structure model' 1 5 2024-03-13 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Data collection'            
2 2 'Structure model' 'Database references'        
3 3 'Structure model' 'Data collection'            
4 3 'Structure model' 'Database references'        
5 4 'Structure model' 'Data collection'            
6 5 'Structure model' 'Author supporting evidence' 
7 6 'Structure model' 'Data collection'            
8 6 'Structure model' 'Database references'        
9 6 'Structure model' 'Derived calculations'       
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 2 'Structure model' citation              
2 3 'Structure model' citation              
3 4 'Structure model' em_imaging_optics     
4 5 'Structure model' pdbx_audit_support    
5 6 'Structure model' chem_comp_atom        
6 6 'Structure model' chem_comp_bond        
7 6 'Structure model' database_2            
8 6 'Structure model' pdbx_struct_oper_list 
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  2 'Structure model' '_citation.journal_abbrev'                  
2  2 'Structure model' '_citation.pdbx_database_id_PubMed'         
3  2 'Structure model' '_citation.title'                           
4  3 'Structure model' '_citation.journal_volume'                  
5  3 'Structure model' '_citation.page_first'                      
6  3 'Structure model' '_citation.page_last'                       
7  4 'Structure model' '_em_imaging_optics.energyfilter_name'      
8  5 'Structure model' '_pdbx_audit_support.funding_organization'  
9  6 'Structure model' '_database_2.pdbx_DOI'                      
10 6 'Structure model' '_database_2.pdbx_database_accession'       
11 6 'Structure model' '_pdbx_struct_oper_list.name'               
12 6 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 
13 6 'Structure model' '_pdbx_struct_oper_list.type'               
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.entry_id                        5W7V 
_pdbx_database_status.recvd_initial_deposition_date   2017-06-20 
_pdbx_database_status.SG_entry                        N 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
_pdbx_database_related.db_name        EMDB 
_pdbx_database_related.details        'CryoEM structure of the segment, DLIIKGISVHI, assembled into a triple-helical fibril' 
_pdbx_database_related.db_id          EMD-8781 
_pdbx_database_related.content_type   'associated EM volume' 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
_audit_author.identifier_ORCID 
'Guenther, E.L.'  1 ? 
'Ge, P.'          2 ? 
'Eisenberg, D.S.' 3 ? 
# 
_citation.abstract                  ? 
_citation.abstract_id_CAS           ? 
_citation.book_id_ISBN              ? 
_citation.book_publisher            ? 
_citation.book_publisher_city       ? 
_citation.book_title                ? 
_citation.coordinate_linkage        ? 
_citation.country                   US 
_citation.database_id_Medline       ? 
_citation.details                   ? 
_citation.id                        primary 
_citation.journal_abbrev            'Nat. Struct. Mol. Biol.' 
_citation.journal_id_ASTM           ? 
_citation.journal_id_CSD            ? 
_citation.journal_id_ISSN           1545-9985 
_citation.journal_full              ? 
_citation.journal_issue             ? 
_citation.journal_volume            25 
_citation.language                  ? 
_citation.page_first                311 
_citation.page_last                 319 
_citation.title                     
'Atomic-level evidence for packing and positional amyloid polymorphism by segment from TDP-43 RRM2.' 
_citation.year                      2018 
_citation.database_id_CSD           ? 
_citation.pdbx_database_id_DOI      10.1038/s41594-018-0045-5 
_citation.pdbx_database_id_PubMed   29531287 
_citation.unpublished_flag          ? 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Guenther, E.L.'  1 ? 
primary 'Ge, P.'          2 ? 
primary 'Trinh, H.'       3 ? 
primary 'Sawaya, M.R.'    4 ? 
primary 'Cascio, D.'      5 ? 
primary 'Boyer, D.R.'     6 ? 
primary 'Gonen, T.'       7 ? 
primary 'Zhou, Z.H.'      8 ? 
primary 'Eisenberg, D.S.' 9 ? 
# 
_entity.id                         1 
_entity.type                       polymer 
_entity.src_method                 syn 
_entity.pdbx_description           'TAR DNA-binding protein 43' 
_entity.formula_weight             1209.479 
_entity.pdbx_number_of_molecules   9 
_entity.pdbx_ec                    ? 
_entity.pdbx_mutation              ? 
_entity.pdbx_fragment              'RRM2 peptide (UNP residues 247-257)' 
_entity.details                    ? 
# 
_entity_name_com.entity_id   1 
_entity_name_com.name        'TDP-43, DLIIKGISVHI' 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           'polypeptide(L)' 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       DLIIKGISVHI 
_entity_poly.pdbx_seq_one_letter_code_can   DLIIKGISVHI 
_entity_poly.pdbx_strand_id                 1,3,2,6,5,4,7,0,8 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  ASP n 
1 2  LEU n 
1 3  ILE n 
1 4  ILE n 
1 5  LYS n 
1 6  GLY n 
1 7  ILE n 
1 8  SER n 
1 9  VAL n 
1 10 HIS n 
1 11 ILE n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       1 
_pdbx_entity_src_syn.pdbx_end_seq_num       11 
_pdbx_entity_src_syn.organism_scientific    'Homo sapiens' 
_pdbx_entity_src_syn.organism_common_name   Human 
_pdbx_entity_src_syn.ncbi_taxonomy_id       9606 
_pdbx_entity_src_syn.details                ? 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4'     133.103 
GLY 'peptide linking'   y GLYCINE         ? 'C2 H5 N O2'     75.067  
HIS 'L-peptide linking' y HISTIDINE       ? 'C6 H10 N3 O2 1' 156.162 
ILE 'L-peptide linking' y ISOLEUCINE      ? 'C6 H13 N O2'    131.173 
LEU 'L-peptide linking' y LEUCINE         ? 'C6 H13 N O2'    131.173 
LYS 'L-peptide linking' y LYSINE          ? 'C6 H15 N2 O2 1' 147.195 
SER 'L-peptide linking' y SERINE          ? 'C3 H7 N O3'     105.093 
VAL 'L-peptide linking' y VALINE          ? 'C5 H11 N O2'    117.146 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  ASP 1  1  1  ASP ASP 1 . n 
A 1 2  LEU 2  2  2  LEU LEU 1 . n 
A 1 3  ILE 3  3  3  ILE ILE 1 . n 
A 1 4  ILE 4  4  4  ILE ILE 1 . n 
A 1 5  LYS 5  5  5  LYS LYS 1 . n 
A 1 6  GLY 6  6  6  GLY GLY 1 . n 
A 1 7  ILE 7  7  7  ILE ILE 1 . n 
A 1 8  SER 8  8  8  SER SER 1 . n 
A 1 9  VAL 9  9  9  VAL VAL 1 . n 
A 1 10 HIS 10 10 10 HIS HIS 1 . n 
A 1 11 ILE 11 11 11 ILE ILE 1 . n 
B 1 1  ASP 1  1  1  ASP ASP 3 . n 
B 1 2  LEU 2  2  2  LEU LEU 3 . n 
B 1 3  ILE 3  3  3  ILE ILE 3 . n 
B 1 4  ILE 4  4  4  ILE ILE 3 . n 
B 1 5  LYS 5  5  5  LYS LYS 3 . n 
B 1 6  GLY 6  6  6  GLY GLY 3 . n 
B 1 7  ILE 7  7  7  ILE ILE 3 . n 
B 1 8  SER 8  8  8  SER SER 3 . n 
B 1 9  VAL 9  9  9  VAL VAL 3 . n 
B 1 10 HIS 10 10 10 HIS HIS 3 . n 
B 1 11 ILE 11 11 11 ILE ILE 3 . n 
C 1 1  ASP 1  1  1  ASP ASP 2 . n 
C 1 2  LEU 2  2  2  LEU LEU 2 . n 
C 1 3  ILE 3  3  3  ILE ILE 2 . n 
C 1 4  ILE 4  4  4  ILE ILE 2 . n 
C 1 5  LYS 5  5  5  LYS LYS 2 . n 
C 1 6  GLY 6  6  6  GLY GLY 2 . n 
C 1 7  ILE 7  7  7  ILE ILE 2 . n 
C 1 8  SER 8  8  8  SER SER 2 . n 
C 1 9  VAL 9  9  9  VAL VAL 2 . n 
C 1 10 HIS 10 10 10 HIS HIS 2 . n 
C 1 11 ILE 11 11 11 ILE ILE 2 . n 
D 1 1  ASP 1  1  1  ASP ASP 6 . n 
D 1 2  LEU 2  2  2  LEU LEU 6 . n 
D 1 3  ILE 3  3  3  ILE ILE 6 . n 
D 1 4  ILE 4  4  4  ILE ILE 6 . n 
D 1 5  LYS 5  5  5  LYS LYS 6 . n 
D 1 6  GLY 6  6  6  GLY GLY 6 . n 
D 1 7  ILE 7  7  7  ILE ILE 6 . n 
D 1 8  SER 8  8  8  SER SER 6 . n 
D 1 9  VAL 9  9  9  VAL VAL 6 . n 
D 1 10 HIS 10 10 10 HIS HIS 6 . n 
D 1 11 ILE 11 11 11 ILE ILE 6 . n 
E 1 1  ASP 1  1  1  ASP ASP 5 . n 
E 1 2  LEU 2  2  2  LEU LEU 5 . n 
E 1 3  ILE 3  3  3  ILE ILE 5 . n 
E 1 4  ILE 4  4  4  ILE ILE 5 . n 
E 1 5  LYS 5  5  5  LYS LYS 5 . n 
E 1 6  GLY 6  6  6  GLY GLY 5 . n 
E 1 7  ILE 7  7  7  ILE ILE 5 . n 
E 1 8  SER 8  8  8  SER SER 5 . n 
E 1 9  VAL 9  9  9  VAL VAL 5 . n 
E 1 10 HIS 10 10 10 HIS HIS 5 . n 
E 1 11 ILE 11 11 11 ILE ILE 5 . n 
F 1 1  ASP 1  1  1  ASP ASP 4 . n 
F 1 2  LEU 2  2  2  LEU LEU 4 . n 
F 1 3  ILE 3  3  3  ILE ILE 4 . n 
F 1 4  ILE 4  4  4  ILE ILE 4 . n 
F 1 5  LYS 5  5  5  LYS LYS 4 . n 
F 1 6  GLY 6  6  6  GLY GLY 4 . n 
F 1 7  ILE 7  7  7  ILE ILE 4 . n 
F 1 8  SER 8  8  8  SER SER 4 . n 
F 1 9  VAL 9  9  9  VAL VAL 4 . n 
F 1 10 HIS 10 10 10 HIS HIS 4 . n 
F 1 11 ILE 11 11 11 ILE ILE 4 . n 
G 1 1  ASP 1  1  1  ASP ASP 7 . n 
G 1 2  LEU 2  2  2  LEU LEU 7 . n 
G 1 3  ILE 3  3  3  ILE ILE 7 . n 
G 1 4  ILE 4  4  4  ILE ILE 7 . n 
G 1 5  LYS 5  5  5  LYS LYS 7 . n 
G 1 6  GLY 6  6  6  GLY GLY 7 . n 
G 1 7  ILE 7  7  7  ILE ILE 7 . n 
G 1 8  SER 8  8  8  SER SER 7 . n 
G 1 9  VAL 9  9  9  VAL VAL 7 . n 
G 1 10 HIS 10 10 10 HIS HIS 7 . n 
G 1 11 ILE 11 11 11 ILE ILE 7 . n 
H 1 1  ASP 1  1  1  ASP ASP 0 . n 
H 1 2  LEU 2  2  2  LEU LEU 0 . n 
H 1 3  ILE 3  3  3  ILE ILE 0 . n 
H 1 4  ILE 4  4  4  ILE ILE 0 . n 
H 1 5  LYS 5  5  5  LYS LYS 0 . n 
H 1 6  GLY 6  6  6  GLY GLY 0 . n 
H 1 7  ILE 7  7  ?  ?   ?   0 . n 
H 1 8  SER 8  8  ?  ?   ?   0 . n 
H 1 9  VAL 9  9  ?  ?   ?   0 . n 
H 1 10 HIS 10 10 ?  ?   ?   0 . n 
H 1 11 ILE 11 11 ?  ?   ?   0 . n 
I 1 1  ASP 1  1  1  ASP ASP 8 . n 
I 1 2  LEU 2  2  2  LEU LEU 8 . n 
I 1 3  ILE 3  3  3  ILE ILE 8 . n 
I 1 4  ILE 4  4  4  ILE ILE 8 . n 
I 1 5  LYS 5  5  5  LYS LYS 8 . n 
I 1 6  GLY 6  6  ?  ?   ?   8 . n 
I 1 7  ILE 7  7  ?  ?   ?   8 . n 
I 1 8  SER 8  8  ?  ?   ?   8 . n 
I 1 9  VAL 9  9  ?  ?   ?   8 . n 
I 1 10 HIS 10 10 ?  ?   ?   8 . n 
I 1 11 ILE 11 11 ?  ?   ?   8 . n 
# 
_software.citation_id            ? 
_software.classification         refinement 
_software.compiler_name          ? 
_software.compiler_version       ? 
_software.contact_author         ? 
_software.contact_author_email   ? 
_software.date                   ? 
_software.description            ? 
_software.dependencies           ? 
_software.hardware               ? 
_software.language               ? 
_software.location               ? 
_software.mods                   ? 
_software.name                   PHENIX 
_software.os                     ? 
_software.os_version             ? 
_software.type                   ? 
_software.version                1.10.1_2155: 
_software.pdbx_ordinal           1 
# 
_cell.angle_alpha                  90.00 
_cell.angle_alpha_esd              ? 
_cell.angle_beta                   90.00 
_cell.angle_beta_esd               ? 
_cell.angle_gamma                  90.00 
_cell.angle_gamma_esd              ? 
_cell.entry_id                     5W7V 
_cell.details                      ? 
_cell.formula_units_Z              ? 
_cell.length_a                     1.000 
_cell.length_a_esd                 ? 
_cell.length_b                     1.000 
_cell.length_b_esd                 ? 
_cell.length_c                     1.000 
_cell.length_c_esd                 ? 
_cell.volume                       ? 
_cell.volume_esd                   ? 
_cell.Z_PDB                        ? 
_cell.reciprocal_angle_alpha       ? 
_cell.reciprocal_angle_beta        ? 
_cell.reciprocal_angle_gamma       ? 
_cell.reciprocal_angle_alpha_esd   ? 
_cell.reciprocal_angle_beta_esd    ? 
_cell.reciprocal_angle_gamma_esd   ? 
_cell.reciprocal_length_a          ? 
_cell.reciprocal_length_b          ? 
_cell.reciprocal_length_c          ? 
_cell.reciprocal_length_a_esd      ? 
_cell.reciprocal_length_b_esd      ? 
_cell.reciprocal_length_c_esd      ? 
_cell.pdbx_unique_axis             ? 
# 
_symmetry.entry_id                         5W7V 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                1 
_symmetry.space_group_name_Hall            ? 
_symmetry.space_group_name_H-M             'P 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
# 
_exptl.absorpt_coefficient_mu     ? 
_exptl.absorpt_correction_T_max   ? 
_exptl.absorpt_correction_T_min   ? 
_exptl.absorpt_correction_type    ? 
_exptl.absorpt_process_details    ? 
_exptl.entry_id                   5W7V 
_exptl.crystals_number            ? 
_exptl.details                    ? 
_exptl.method                     'ELECTRON MICROSCOPY' 
_exptl.method_details             ? 
# 
_refine.entry_id                                 5W7V 
_refine.pdbx_refine_id                           'ELECTRON MICROSCOPY' 
_refine.ls_d_res_high                            . 
_refine.pdbx_diffrn_id                           ? 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.ls_number_reflns_obs                     ? 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             ? 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_obs                          ? 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
loop_
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.criterion 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.number 
_refine_ls_restr.rejects 
_refine_ls_restr.type 
_refine_ls_restr.weight 
_refine_ls_restr.pdbx_restraint_function 
'ELECTRON MICROSCOPY' ? 0.007  ? 20370 ? f_bond_d           ? ? 
'ELECTRON MICROSCOPY' ? 0.771  ? 27210 ? f_angle_d          ? ? 
'ELECTRON MICROSCOPY' ? 10.106 ? 12300 ? f_dihedral_angle_d ? ? 
'ELECTRON MICROSCOPY' ? 0.063  ? 3840  ? f_chiral_restr     ? ? 
'ELECTRON MICROSCOPY' ? 0.002  ? 3060  ? f_plane_restr      ? ? 
# 
_struct.entry_id                     5W7V 
_struct.title                        'CryoEM structure of the segment, DLIIKGISVHI, assembled into a triple-helical fibril' 
_struct.pdbx_model_details           ? 
_struct.pdbx_formula_weight          ? 
_struct.pdbx_formula_weight_method   ? 
_struct.pdbx_model_type_details      ? 
_struct.pdbx_CASP_flag               N 
# 
_struct_keywords.entry_id        5W7V 
_struct_keywords.text            'Amyloid, steric zipper, PROTEIN FIBRIL' 
_struct_keywords.pdbx_keywords   'PROTEIN FIBRIL' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 1 ? 
D N N 1 ? 
E N N 1 ? 
F N N 1 ? 
G N N 1 ? 
H N N 1 ? 
I N N 1 ? 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    UNP 
_struct_ref.db_code                    TADBP_HUMAN 
_struct_ref.pdbx_db_accession          Q13148 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_seq_one_letter_code   DLIIKGISVHI 
_struct_ref.pdbx_align_begin           247 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 5W7V 1 1 ? 11 ? Q13148 247 ? 257 ? 1 11 
2 1 5W7V 3 1 ? 11 ? Q13148 247 ? 257 ? 1 11 
3 1 5W7V 2 1 ? 11 ? Q13148 247 ? 257 ? 1 11 
4 1 5W7V 6 1 ? 11 ? Q13148 247 ? 257 ? 1 11 
5 1 5W7V 5 1 ? 11 ? Q13148 247 ? 257 ? 1 11 
6 1 5W7V 4 1 ? 11 ? Q13148 247 ? 257 ? 1 11 
7 1 5W7V 7 1 ? 11 ? Q13148 247 ? 257 ? 1 11 
8 1 5W7V 0 1 ? 11 ? Q13148 247 ? 257 ? 1 11 
9 1 5W7V 8 1 ? 11 ? Q13148 247 ? 257 ? 1 11 
# 
loop_
_pdbx_struct_assembly.id 
_pdbx_struct_assembly.details 
_pdbx_struct_assembly.method_details 
_pdbx_struct_assembly.oligomeric_details 
_pdbx_struct_assembly.oligomeric_count 
1 'representative helical assembly'            ? 270-meric 270 
2 'helical asymmetric unit'                    ? nonameric 9   
3 'helical asymmetric unit, std helical frame' ? nonameric 9   
# 
loop_
_pdbx_struct_assembly_gen.assembly_id 
_pdbx_struct_assembly_gen.oper_expression 
_pdbx_struct_assembly_gen.asym_id_list 
1 '(1-30)' A,B,C,D,E,F,G,H,I 
2 16       A,B,C,D,E,F,G,H,I 
3 H        A,B,C,D,E,F,G,H,I 
# 
_pdbx_struct_assembly_auth_evidence.id                     1 
_pdbx_struct_assembly_auth_evidence.assembly_id            1 
_pdbx_struct_assembly_auth_evidence.experimental_support   microscopy 
_pdbx_struct_assembly_auth_evidence.details                ? 
# 
loop_
_pdbx_struct_oper_list.id 
_pdbx_struct_oper_list.type 
_pdbx_struct_oper_list.name 
_pdbx_struct_oper_list.symmetry_operation 
_pdbx_struct_oper_list.matrix[1][1] 
_pdbx_struct_oper_list.matrix[1][2] 
_pdbx_struct_oper_list.matrix[1][3] 
_pdbx_struct_oper_list.vector[1] 
_pdbx_struct_oper_list.matrix[2][1] 
_pdbx_struct_oper_list.matrix[2][2] 
_pdbx_struct_oper_list.matrix[2][3] 
_pdbx_struct_oper_list.vector[2] 
_pdbx_struct_oper_list.matrix[3][1] 
_pdbx_struct_oper_list.matrix[3][2] 
_pdbx_struct_oper_list.matrix[3][3] 
_pdbx_struct_oper_list.vector[3] 
H  'identity operation'         1_555 x,y,z 1.00000000  0.00000000  0.00000000 0.00000 0.00000000  1.00000000  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 0.00000   
1  'helical symmetry operation' ?     ?     0.99334264  -0.11519721 0.00000000 0.00000 0.11519721  0.99334264  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -23.97000 
2  'helical symmetry operation' ?     ?     -0.40396045 0.91477645  0.00000000 0.00000 -0.91477645 -0.40396045 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -22.37200 
3  'helical symmetry operation' ?     ?     -0.58400884 -0.81174730 0.00000000 0.00000 0.81174730  -0.58400884 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -20.77400 
4  'helical symmetry operation' ?     ?     0.99573759  -0.09223156 0.00000000 0.00000 0.09223156  0.99573759  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -19.17600 
5  'helical symmetry operation' ?     ?     -0.42497372 0.90520569  0.00000000 0.00000 -0.90520569 -0.42497372 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -17.57800 
6  'helical symmetry operation' ?     ?     -0.56511100 -0.82501488 0.00000000 0.00000 0.82501488  -0.56511100 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -15.98000 
7  'helical symmetry operation' ?     ?     0.99760165  -0.06921673 0.00000000 0.00000 0.06921673  0.99760165  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -14.38200 
8  'helical symmetry operation' ?     ?     -0.44576041 0.89515231  0.00000000 0.00000 -0.89515231 -0.44576041 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -12.78400 
9  'helical symmetry operation' ?     ?     -0.54591187 -0.83784260 0.00000000 0.00000 0.83784260  -0.54591187 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -11.18600 
10 'helical symmetry operation' ?     ?     0.99893383  -0.04616500 0.00000000 0.00000 0.04616500  0.99893383  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -9.58800  
11 'helical symmetry operation' ?     ?     -0.46630944 0.88462167  0.00000000 0.00000 -0.88462167 -0.46630944 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -7.99000  
12 'helical symmetry operation' ?     ?     -0.52642169 -0.85022362 0.00000000 0.00000 0.85022362  -0.52642169 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -6.39200  
13 'helical symmetry operation' ?     ?     0.99973342  -0.02308865 0.00000000 0.00000 0.02308865  0.99973342  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -4.79400  
14 'helical symmetry operation' ?     ?     -0.48660986 0.87361939  0.00000000 0.00000 -0.87361939 -0.48660986 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -3.19600  
15 'helical symmetry operation' ?     ?     -0.50665084 -0.86215134 0.00000000 0.00000 0.86215134  -0.50665084 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -1.59800  
16 'identity operation'         1_555 x,y,z 1.00000000  0.00000000  0.00000000 0.00000 0.00000000  1.00000000  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 0.00000   
17 'helical symmetry operation' ?     ?     -0.50665084 0.86215134  0.00000000 0.00000 -0.86215134 -0.50665084 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 1.59800   
18 'helical symmetry operation' ?     ?     -0.48660986 -0.87361939 0.00000000 0.00000 0.87361939  -0.48660986 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 3.19600   
19 'helical symmetry operation' ?     ?     0.99973342  0.02308865  0.00000000 0.00000 -0.02308865 0.99973342  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 4.79400   
20 'helical symmetry operation' ?     ?     -0.52642169 0.85022362  0.00000000 0.00000 -0.85022362 -0.52642169 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 6.39200   
21 'helical symmetry operation' ?     ?     -0.46630944 -0.88462167 0.00000000 0.00000 0.88462167  -0.46630944 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 7.99000   
22 'helical symmetry operation' ?     ?     0.99893383  0.04616500  0.00000000 0.00000 -0.04616500 0.99893383  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 9.58800   
23 'helical symmetry operation' ?     ?     -0.54591187 0.83784260  0.00000000 0.00000 -0.83784260 -0.54591187 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 11.18600  
24 'helical symmetry operation' ?     ?     -0.44576041 -0.89515231 0.00000000 0.00000 0.89515231  -0.44576041 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 12.78400  
25 'helical symmetry operation' ?     ?     0.99760165  0.06921673  0.00000000 0.00000 -0.06921673 0.99760165  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 14.38200  
26 'helical symmetry operation' ?     ?     -0.56511100 0.82501488  0.00000000 0.00000 -0.82501488 -0.56511100 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 15.98000  
27 'helical symmetry operation' ?     ?     -0.42497372 -0.90520569 0.00000000 0.00000 0.90520569  -0.42497372 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 17.57800  
28 'helical symmetry operation' ?     ?     0.99573759  0.09223156  0.00000000 0.00000 -0.09223156 0.99573759  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 19.17600  
29 'helical symmetry operation' ?     ?     -0.58400884 0.81174730  0.00000000 0.00000 -0.81174730 -0.58400884 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 20.77400  
30 'helical symmetry operation' ?     ?     -0.40396045 -0.91477645 0.00000000 0.00000 0.91477645  -0.40396045 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 22.37200  
# 
_pdbx_validate_torsion.id              1 
_pdbx_validate_torsion.PDB_model_num   1 
_pdbx_validate_torsion.auth_comp_id    ILE 
_pdbx_validate_torsion.auth_asym_id    4 
_pdbx_validate_torsion.auth_seq_id     7 
_pdbx_validate_torsion.PDB_ins_code    ? 
_pdbx_validate_torsion.label_alt_id    ? 
_pdbx_validate_torsion.phi             -101.51 
_pdbx_validate_torsion.psi             -64.89 
# 
_pdbx_helical_symmetry.entry_id                  5W7V 
_pdbx_helical_symmetry.number_of_operations      30 
_pdbx_helical_symmetry.rotation_per_n_subunits   -120.441 
_pdbx_helical_symmetry.rise_per_n_subunits       1.598 
_pdbx_helical_symmetry.n_subunits_divisor        1 
_pdbx_helical_symmetry.dyad_axis                 no 
_pdbx_helical_symmetry.circular_symmetry         1 
# 
_em_3d_fitting.entry_id          5W7V 
_em_3d_fitting.id                1 
_em_3d_fitting.details           ? 
_em_3d_fitting.overall_b_value   ? 
_em_3d_fitting.ref_protocol      'AB INITIO MODEL' 
_em_3d_fitting.ref_space         REAL 
_em_3d_fitting.target_criteria   ? 
_em_3d_fitting.method            ? 
# 
_em_3d_reconstruction.entry_id                    5W7V 
_em_3d_reconstruction.id                          1 
_em_3d_reconstruction.algorithm                   'FOURIER SPACE' 
_em_3d_reconstruction.details                     ? 
_em_3d_reconstruction.refinement_type             ? 
_em_3d_reconstruction.image_processing_id         1 
_em_3d_reconstruction.num_class_averages          ? 
_em_3d_reconstruction.num_particles               18818 
_em_3d_reconstruction.resolution                  3.8 
_em_3d_reconstruction.resolution_method           'FSC 0.5 CUT-OFF' 
_em_3d_reconstruction.symmetry_type               HELICAL 
_em_3d_reconstruction.method                      ? 
_em_3d_reconstruction.nominal_pixel_size          ? 
_em_3d_reconstruction.actual_pixel_size           ? 
_em_3d_reconstruction.magnification_calibration   ? 
_em_3d_reconstruction.citation_id                 ? 
_em_3d_reconstruction.euler_angles_details        ? 
# 
_em_buffer.id            1 
_em_buffer.details       ? 
_em_buffer.pH            7 
_em_buffer.specimen_id   1 
_em_buffer.name          ? 
# 
_em_entity_assembly.id                   1 
_em_entity_assembly.parent_id            0 
_em_entity_assembly.details              ? 
_em_entity_assembly.name                 'DLIIKGISVHI fibril' 
_em_entity_assembly.source               NATURAL 
_em_entity_assembly.type                 COMPLEX 
_em_entity_assembly.entity_id_list       1 
_em_entity_assembly.synonym              ? 
_em_entity_assembly.oligomeric_details   ? 
# 
_em_image_scans.entry_id                5W7V 
_em_image_scans.id                      1 
_em_image_scans.dimension_height        ? 
_em_image_scans.dimension_width         ? 
_em_image_scans.frames_per_image        50 
_em_image_scans.image_recording_id      1 
_em_image_scans.sampling_size           ? 
_em_image_scans.scanner_model           ? 
_em_image_scans.used_frames_per_image   4-20 
_em_image_scans.citation_id             ? 
_em_image_scans.number_digital_images   ? 
_em_image_scans.od_range                ? 
_em_image_scans.quant_bit_size          ? 
_em_image_scans.details                 ? 
# 
_em_imaging.id                              1 
_em_imaging.entry_id                        5W7V 
_em_imaging.accelerating_voltage            300 
_em_imaging.alignment_procedure             'COMA FREE' 
_em_imaging.c2_aperture_diameter            70 
_em_imaging.calibrated_defocus_max          ? 
_em_imaging.calibrated_defocus_min          ? 
_em_imaging.calibrated_magnification        ? 
_em_imaging.cryogen                         NITROGEN 
_em_imaging.details                         ? 
_em_imaging.electron_source                 'FIELD EMISSION GUN' 
_em_imaging.illumination_mode               'FLOOD BEAM' 
_em_imaging.microscope_model                'FEI TITAN KRIOS' 
_em_imaging.mode                            'BRIGHT FIELD' 
_em_imaging.nominal_cs                      2.7 
_em_imaging.nominal_defocus_max             ? 
_em_imaging.nominal_defocus_min             ? 
_em_imaging.nominal_magnification           ? 
_em_imaging.recording_temperature_maximum   ? 
_em_imaging.recording_temperature_minimum   ? 
_em_imaging.residual_tilt                   ? 
_em_imaging.specimen_holder_model           'FEI TITAN KRIOS AUTOGRID HOLDER' 
_em_imaging.specimen_id                     1 
_em_imaging.citation_id                     ? 
_em_imaging.date                            ? 
_em_imaging.temperature                     ? 
_em_imaging.tilt_angle_min                  ? 
_em_imaging.tilt_angle_max                  ? 
_em_imaging.astigmatism                     ? 
_em_imaging.detector_distance               ? 
_em_imaging.electron_beam_tilt_params       ? 
_em_imaging.specimen_holder_type            ? 
# 
_em_sample_support.id               1 
_em_sample_support.specimen_id      1 
_em_sample_support.details          ? 
_em_sample_support.grid_material    COPPER 
_em_sample_support.grid_mesh_size   200 
_em_sample_support.grid_type        'Quantifoil R1.2/1.3' 
_em_sample_support.method           ? 
_em_sample_support.film_material    ? 
_em_sample_support.citation_id      ? 
# 
_em_vitrification.id                    1 
_em_vitrification.specimen_id           1 
_em_vitrification.chamber_temperature   295 
_em_vitrification.cryogen_name          ETHANE 
_em_vitrification.details               ? 
_em_vitrification.humidity              100 
_em_vitrification.instrument            'FEI VITROBOT MARK IV' 
_em_vitrification.entry_id              5W7V 
_em_vitrification.citation_id           ? 
_em_vitrification.method                ? 
_em_vitrification.temp                  ? 
_em_vitrification.time_resolved_state   ? 
# 
_em_experiment.entry_id                5W7V 
_em_experiment.id                      1 
_em_experiment.aggregation_state       'HELICAL ARRAY' 
_em_experiment.reconstruction_method   HELICAL 
_em_experiment.entity_assembly_id      1 
# 
loop_
_pdbx_unobs_or_zero_occ_residues.id 
_pdbx_unobs_or_zero_occ_residues.PDB_model_num 
_pdbx_unobs_or_zero_occ_residues.polymer_flag 
_pdbx_unobs_or_zero_occ_residues.occupancy_flag 
_pdbx_unobs_or_zero_occ_residues.auth_asym_id 
_pdbx_unobs_or_zero_occ_residues.auth_comp_id 
_pdbx_unobs_or_zero_occ_residues.auth_seq_id 
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code 
_pdbx_unobs_or_zero_occ_residues.label_asym_id 
_pdbx_unobs_or_zero_occ_residues.label_comp_id 
_pdbx_unobs_or_zero_occ_residues.label_seq_id 
1  1 Y 1 0 ILE 7  ? H ILE 7  
2  1 Y 1 0 SER 8  ? H SER 8  
3  1 Y 1 0 VAL 9  ? H VAL 9  
4  1 Y 1 0 HIS 10 ? H HIS 10 
5  1 Y 1 0 ILE 11 ? H ILE 11 
6  1 Y 1 8 GLY 6  ? I GLY 6  
7  1 Y 1 8 ILE 7  ? I ILE 7  
8  1 Y 1 8 SER 8  ? I SER 8  
9  1 Y 1 8 VAL 9  ? I VAL 9  
10 1 Y 1 8 HIS 10 ? I HIS 10 
11 1 Y 1 8 ILE 11 ? I ILE 11 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
ASP N    N N N 1   
ASP CA   C N S 2   
ASP C    C N N 3   
ASP O    O N N 4   
ASP CB   C N N 5   
ASP CG   C N N 6   
ASP OD1  O N N 7   
ASP OD2  O N N 8   
ASP OXT  O N N 9   
ASP H    H N N 10  
ASP H2   H N N 11  
ASP HA   H N N 12  
ASP HB2  H N N 13  
ASP HB3  H N N 14  
ASP HD2  H N N 15  
ASP HXT  H N N 16  
GLY N    N N N 17  
GLY CA   C N N 18  
GLY C    C N N 19  
GLY O    O N N 20  
GLY OXT  O N N 21  
GLY H    H N N 22  
GLY H2   H N N 23  
GLY HA2  H N N 24  
GLY HA3  H N N 25  
GLY HXT  H N N 26  
HIS N    N N N 27  
HIS CA   C N S 28  
HIS C    C N N 29  
HIS O    O N N 30  
HIS CB   C N N 31  
HIS CG   C Y N 32  
HIS ND1  N Y N 33  
HIS CD2  C Y N 34  
HIS CE1  C Y N 35  
HIS NE2  N Y N 36  
HIS OXT  O N N 37  
HIS H    H N N 38  
HIS H2   H N N 39  
HIS HA   H N N 40  
HIS HB2  H N N 41  
HIS HB3  H N N 42  
HIS HD1  H N N 43  
HIS HD2  H N N 44  
HIS HE1  H N N 45  
HIS HE2  H N N 46  
HIS HXT  H N N 47  
ILE N    N N N 48  
ILE CA   C N S 49  
ILE C    C N N 50  
ILE O    O N N 51  
ILE CB   C N S 52  
ILE CG1  C N N 53  
ILE CG2  C N N 54  
ILE CD1  C N N 55  
ILE OXT  O N N 56  
ILE H    H N N 57  
ILE H2   H N N 58  
ILE HA   H N N 59  
ILE HB   H N N 60  
ILE HG12 H N N 61  
ILE HG13 H N N 62  
ILE HG21 H N N 63  
ILE HG22 H N N 64  
ILE HG23 H N N 65  
ILE HD11 H N N 66  
ILE HD12 H N N 67  
ILE HD13 H N N 68  
ILE HXT  H N N 69  
LEU N    N N N 70  
LEU CA   C N S 71  
LEU C    C N N 72  
LEU O    O N N 73  
LEU CB   C N N 74  
LEU CG   C N N 75  
LEU CD1  C N N 76  
LEU CD2  C N N 77  
LEU OXT  O N N 78  
LEU H    H N N 79  
LEU H2   H N N 80  
LEU HA   H N N 81  
LEU HB2  H N N 82  
LEU HB3  H N N 83  
LEU HG   H N N 84  
LEU HD11 H N N 85  
LEU HD12 H N N 86  
LEU HD13 H N N 87  
LEU HD21 H N N 88  
LEU HD22 H N N 89  
LEU HD23 H N N 90  
LEU HXT  H N N 91  
LYS N    N N N 92  
LYS CA   C N S 93  
LYS C    C N N 94  
LYS O    O N N 95  
LYS CB   C N N 96  
LYS CG   C N N 97  
LYS CD   C N N 98  
LYS CE   C N N 99  
LYS NZ   N N N 100 
LYS OXT  O N N 101 
LYS H    H N N 102 
LYS H2   H N N 103 
LYS HA   H N N 104 
LYS HB2  H N N 105 
LYS HB3  H N N 106 
LYS HG2  H N N 107 
LYS HG3  H N N 108 
LYS HD2  H N N 109 
LYS HD3  H N N 110 
LYS HE2  H N N 111 
LYS HE3  H N N 112 
LYS HZ1  H N N 113 
LYS HZ2  H N N 114 
LYS HZ3  H N N 115 
LYS HXT  H N N 116 
SER N    N N N 117 
SER CA   C N S 118 
SER C    C N N 119 
SER O    O N N 120 
SER CB   C N N 121 
SER OG   O N N 122 
SER OXT  O N N 123 
SER H    H N N 124 
SER H2   H N N 125 
SER HA   H N N 126 
SER HB2  H N N 127 
SER HB3  H N N 128 
SER HG   H N N 129 
SER HXT  H N N 130 
VAL N    N N N 131 
VAL CA   C N S 132 
VAL C    C N N 133 
VAL O    O N N 134 
VAL CB   C N N 135 
VAL CG1  C N N 136 
VAL CG2  C N N 137 
VAL OXT  O N N 138 
VAL H    H N N 139 
VAL H2   H N N 140 
VAL HA   H N N 141 
VAL HB   H N N 142 
VAL HG11 H N N 143 
VAL HG12 H N N 144 
VAL HG13 H N N 145 
VAL HG21 H N N 146 
VAL HG22 H N N 147 
VAL HG23 H N N 148 
VAL HXT  H N N 149 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ASP N   CA   sing N N 1   
ASP N   H    sing N N 2   
ASP N   H2   sing N N 3   
ASP CA  C    sing N N 4   
ASP CA  CB   sing N N 5   
ASP CA  HA   sing N N 6   
ASP C   O    doub N N 7   
ASP C   OXT  sing N N 8   
ASP CB  CG   sing N N 9   
ASP CB  HB2  sing N N 10  
ASP CB  HB3  sing N N 11  
ASP CG  OD1  doub N N 12  
ASP CG  OD2  sing N N 13  
ASP OD2 HD2  sing N N 14  
ASP OXT HXT  sing N N 15  
GLY N   CA   sing N N 16  
GLY N   H    sing N N 17  
GLY N   H2   sing N N 18  
GLY CA  C    sing N N 19  
GLY CA  HA2  sing N N 20  
GLY CA  HA3  sing N N 21  
GLY C   O    doub N N 22  
GLY C   OXT  sing N N 23  
GLY OXT HXT  sing N N 24  
HIS N   CA   sing N N 25  
HIS N   H    sing N N 26  
HIS N   H2   sing N N 27  
HIS CA  C    sing N N 28  
HIS CA  CB   sing N N 29  
HIS CA  HA   sing N N 30  
HIS C   O    doub N N 31  
HIS C   OXT  sing N N 32  
HIS CB  CG   sing N N 33  
HIS CB  HB2  sing N N 34  
HIS CB  HB3  sing N N 35  
HIS CG  ND1  sing Y N 36  
HIS CG  CD2  doub Y N 37  
HIS ND1 CE1  doub Y N 38  
HIS ND1 HD1  sing N N 39  
HIS CD2 NE2  sing Y N 40  
HIS CD2 HD2  sing N N 41  
HIS CE1 NE2  sing Y N 42  
HIS CE1 HE1  sing N N 43  
HIS NE2 HE2  sing N N 44  
HIS OXT HXT  sing N N 45  
ILE N   CA   sing N N 46  
ILE N   H    sing N N 47  
ILE N   H2   sing N N 48  
ILE CA  C    sing N N 49  
ILE CA  CB   sing N N 50  
ILE CA  HA   sing N N 51  
ILE C   O    doub N N 52  
ILE C   OXT  sing N N 53  
ILE CB  CG1  sing N N 54  
ILE CB  CG2  sing N N 55  
ILE CB  HB   sing N N 56  
ILE CG1 CD1  sing N N 57  
ILE CG1 HG12 sing N N 58  
ILE CG1 HG13 sing N N 59  
ILE CG2 HG21 sing N N 60  
ILE CG2 HG22 sing N N 61  
ILE CG2 HG23 sing N N 62  
ILE CD1 HD11 sing N N 63  
ILE CD1 HD12 sing N N 64  
ILE CD1 HD13 sing N N 65  
ILE OXT HXT  sing N N 66  
LEU N   CA   sing N N 67  
LEU N   H    sing N N 68  
LEU N   H2   sing N N 69  
LEU CA  C    sing N N 70  
LEU CA  CB   sing N N 71  
LEU CA  HA   sing N N 72  
LEU C   O    doub N N 73  
LEU C   OXT  sing N N 74  
LEU CB  CG   sing N N 75  
LEU CB  HB2  sing N N 76  
LEU CB  HB3  sing N N 77  
LEU CG  CD1  sing N N 78  
LEU CG  CD2  sing N N 79  
LEU CG  HG   sing N N 80  
LEU CD1 HD11 sing N N 81  
LEU CD1 HD12 sing N N 82  
LEU CD1 HD13 sing N N 83  
LEU CD2 HD21 sing N N 84  
LEU CD2 HD22 sing N N 85  
LEU CD2 HD23 sing N N 86  
LEU OXT HXT  sing N N 87  
LYS N   CA   sing N N 88  
LYS N   H    sing N N 89  
LYS N   H2   sing N N 90  
LYS CA  C    sing N N 91  
LYS CA  CB   sing N N 92  
LYS CA  HA   sing N N 93  
LYS C   O    doub N N 94  
LYS C   OXT  sing N N 95  
LYS CB  CG   sing N N 96  
LYS CB  HB2  sing N N 97  
LYS CB  HB3  sing N N 98  
LYS CG  CD   sing N N 99  
LYS CG  HG2  sing N N 100 
LYS CG  HG3  sing N N 101 
LYS CD  CE   sing N N 102 
LYS CD  HD2  sing N N 103 
LYS CD  HD3  sing N N 104 
LYS CE  NZ   sing N N 105 
LYS CE  HE2  sing N N 106 
LYS CE  HE3  sing N N 107 
LYS NZ  HZ1  sing N N 108 
LYS NZ  HZ2  sing N N 109 
LYS NZ  HZ3  sing N N 110 
LYS OXT HXT  sing N N 111 
SER N   CA   sing N N 112 
SER N   H    sing N N 113 
SER N   H2   sing N N 114 
SER CA  C    sing N N 115 
SER CA  CB   sing N N 116 
SER CA  HA   sing N N 117 
SER C   O    doub N N 118 
SER C   OXT  sing N N 119 
SER CB  OG   sing N N 120 
SER CB  HB2  sing N N 121 
SER CB  HB3  sing N N 122 
SER OG  HG   sing N N 123 
SER OXT HXT  sing N N 124 
VAL N   CA   sing N N 125 
VAL N   H    sing N N 126 
VAL N   H2   sing N N 127 
VAL CA  C    sing N N 128 
VAL CA  CB   sing N N 129 
VAL CA  HA   sing N N 130 
VAL C   O    doub N N 131 
VAL C   OXT  sing N N 132 
VAL CB  CG1  sing N N 133 
VAL CB  CG2  sing N N 134 
VAL CB  HB   sing N N 135 
VAL CG1 HG11 sing N N 136 
VAL CG1 HG12 sing N N 137 
VAL CG1 HG13 sing N N 138 
VAL CG2 HG21 sing N N 139 
VAL CG2 HG22 sing N N 140 
VAL CG2 HG23 sing N N 141 
VAL OXT HXT  sing N N 142 
# 
_em_buffer_component.buffer_id             1 
_em_buffer_component.id                    1 
_em_buffer_component.concentration         ? 
_em_buffer_component.concentration_units   ? 
_em_buffer_component.formula               H2O 
_em_buffer_component.name                  Water 
# 
_em_ctf_correction.id                       1 
_em_ctf_correction.em_image_processing_id   1 
_em_ctf_correction.type                     'PHASE FLIPPING AND AMPLITUDE CORRECTION' 
_em_ctf_correction.details                  ? 
# 
_em_entity_assembly_molwt.entity_assembly_id   1 
_em_entity_assembly_molwt.id                   1 
_em_entity_assembly_molwt.experimental_flag    NO 
_em_entity_assembly_molwt.units                ? 
_em_entity_assembly_molwt.value                ? 
# 
_em_entity_assembly_naturalsource.cellular_location    ? 
_em_entity_assembly_naturalsource.entity_assembly_id   1 
_em_entity_assembly_naturalsource.id                   1 
_em_entity_assembly_naturalsource.ncbi_tax_id          9606 
_em_entity_assembly_naturalsource.organ                ? 
_em_entity_assembly_naturalsource.organelle            ? 
_em_entity_assembly_naturalsource.organism             'Homo sapiens' 
_em_entity_assembly_naturalsource.strain               ? 
_em_entity_assembly_naturalsource.tissue               ? 
_em_entity_assembly_naturalsource.cell                 ? 
# 
_em_helical_entity.id                             1 
_em_helical_entity.image_processing_id            1 
_em_helical_entity.angular_rotation_per_subunit   -120.441 
_em_helical_entity.axial_rise_per_subunit         1.598 
_em_helical_entity.axial_symmetry                 C1 
_em_helical_entity.details                        ? 
# 
_em_image_processing.id                   1 
_em_image_processing.image_recording_id   1 
_em_image_processing.details              ? 
# 
_em_image_recording.id                            1 
_em_image_recording.imaging_id                    1 
_em_image_recording.avg_electron_dose_per_image   1.2 
_em_image_recording.average_exposure_time         0.2 
_em_image_recording.details                       ? 
_em_image_recording.detector_mode                 COUNTING 
_em_image_recording.film_or_detector_model        'GATAN K2 QUANTUM (4k x 4k)' 
_em_image_recording.num_diffraction_images        ? 
_em_image_recording.num_grids_imaged              1 
_em_image_recording.num_real_images               610 
# 
_em_imaging_optics.id                         1 
_em_imaging_optics.imaging_id                 1 
_em_imaging_optics.chr_aberration_corrector   ? 
_em_imaging_optics.energyfilter_lower         ? 
_em_imaging_optics.energyfilter_name          'GIF Quantum' 
_em_imaging_optics.energyfilter_upper         ? 
_em_imaging_optics.phase_plate                ? 
_em_imaging_optics.sph_aberration_corrector   ? 
# 
loop_
_em_software.id 
_em_software.category 
_em_software.details 
_em_software.name 
_em_software.version 
_em_software.image_processing_id 
_em_software.fitting_id 
_em_software.imaging_id 
1  'PARTICLE SELECTION'       ?                       EMAN    1.9 1 ? ? 
2  'IMAGE ACQUISITION'        ?                       Leginon 3.2 ? ? 1 
3  MASKING                    ?                       ?       ?   ? ? ? 
4  'CTF CORRECTION'           ?                       CTFFIND 4.0 1 ? ? 
5  'LAYERLINE INDEXING'       ?                       ?       ?   ? ? ? 
6  'DIFFRACTION INDEXING'     ?                       ?       ?   ? ? ? 
7  'MODEL FITTING'            ?                       ?       ?   ? 1 ? 
8  OTHER                      ?                       ?       ?   ? ? ? 
9  'INITIAL EULER ASSIGNMENT' ?                       ?       ?   1 ? ? 
10 'FINAL EULER ASSIGNMENT'   ?                       ?       ?   1 ? ? 
11 CLASSIFICATION             ?                       ?       ?   1 ? ? 
12 RECONSTRUCTION             '+IHRSR implementation' RELION  1.4 1 ? ? 
13 'MODEL REFINEMENT'         ?                       ?       ?   ? 1 ? 
# 
_em_specimen.id                      1 
_em_specimen.experiment_id           1 
_em_specimen.concentration           ? 
_em_specimen.details                 ? 
_em_specimen.embedding_applied       NO 
_em_specimen.shadowing_applied       NO 
_em_specimen.staining_applied        NO 
_em_specimen.vitrification_applied   YES 
# 
_pdbx_audit_support.funding_organization   
'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 
_pdbx_audit_support.country                'United States' 
_pdbx_audit_support.grant_number           GM071940 
_pdbx_audit_support.ordinal                1 
# 
_atom_sites.entry_id                    5W7V 
_atom_sites.fract_transf_matrix[1][1]   1.000000 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   1.000000 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   1.000000 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
# 
loop_