HEADER HYDROLASE 22-JUN-17 5W90 TITLE FEZ-1 METALLO-BETA-LACTAMASE FROM LEGIONELLA GORMANII MODELLED WITH TITLE 2 UNKNOWN LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: FEZ-1 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 21-282; COMPND 5 SYNONYM: METALLO-BETA-LACTAMASE L1; COMPND 6 EC: 3.5.2.6; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FLUORIBACTER GORMANII; SOURCE 3 ORGANISM_TAXID: 464; SOURCE 4 GENE: BLAFEZ-1, LGOR_2502; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)(PLYSS); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDML1810 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR I.GARCIA-SAEZ,P.S.MERCURI,R.KAHN,I.G.SHABALIN,J.E.RACZYNSKA, AUTHOR 2 M.JASKOLSKI,W.MINOR,C.PAPAMICAEL,J.M.FRERE,M.GALLENI,O.DIDEBERG REVDAT 5 13-NOV-24 5W90 1 REMARK REVDAT 4 04-OCT-23 5W90 1 REMARK REVDAT 3 27-APR-22 5W90 1 LINK REVDAT 2 26-DEC-18 5W90 1 JRNL REVDAT 1 20-JUN-18 5W90 0 SPRSDE 20-JUN-18 5W90 1JT1 JRNL AUTH I.GARCIA-SAEZ,P.S.MERCURI,C.PAPAMICAEL,R.KAHN,J.M.FRERE, JRNL AUTH 2 M.GALLENI,G.M.ROSSOLINI,O.DIDEBERG JRNL TITL THREE-DIMENSIONAL STRUCTURE OF FEZ-1, A MONOMERIC SUBCLASS JRNL TITL 2 B3 METALLO-BETA-LACTAMASE FROM FLUORIBACTER GORMANII, IN JRNL TITL 3 NATIVE FORM AND IN COMPLEX WITH D-CAPTOPRIL. JRNL REF J. MOL. BIOL. V. 325 651 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12507470 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.E.RACZYNSKA,I.G.SHABALIN,W.MINOR,A.WLODAWER,M.JASKOLSKI REMARK 1 TITL A CLOSE LOOK ONTO STRUCTURAL MODELS AND PRIMARY LIGANDS OF REMARK 1 TITL 2 METALLO-BETA-LACTAMASES. REMARK 1 REF DRUG RESIST. UPDAT. V. 40 1 2018 REMARK 1 REFN ESSN 1532-2084 REMARK 1 PMID 30466711 REMARK 1 DOI 10.1016/J.DRUP.2018.08.001 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 20581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.116 REMARK 3 R VALUE (WORKING SET) : 0.112 REMARK 3 FREE R VALUE : 0.155 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2334 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 771 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 46.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.1430 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.1950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2055 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 419 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.41000 REMARK 3 B22 (A**2) : 0.10000 REMARK 3 B33 (A**2) : -0.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.07000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.103 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.334 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2146 ; 0.013 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 1937 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2908 ; 1.544 ; 1.673 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4538 ; 1.014 ; 1.648 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 273 ;16.745 ; 5.330 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;33.575 ;24.086 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 364 ;11.774 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ; 7.491 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 285 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2554 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 394 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2 ; 3.630 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 31 REMARK 3 ORIGIN FOR THE GROUP (A): 23.1770 -10.2260 15.1830 REMARK 3 T TENSOR REMARK 3 T11: 0.1088 T22: 0.1259 REMARK 3 T33: 0.0819 T12: 0.0464 REMARK 3 T13: -0.0111 T23: 0.0332 REMARK 3 L TENSOR REMARK 3 L11: 3.3255 L22: 4.0762 REMARK 3 L33: 2.9983 L12: -1.4444 REMARK 3 L13: 1.2578 L23: -2.0371 REMARK 3 S TENSOR REMARK 3 S11: -0.0970 S12: -0.2631 S13: 0.0036 REMARK 3 S21: 0.3906 S22: -0.0701 S23: -0.1681 REMARK 3 S31: 0.0480 S32: 0.1815 S33: 0.1672 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2500 -2.0630 7.3180 REMARK 3 T TENSOR REMARK 3 T11: 0.0292 T22: 0.0870 REMARK 3 T33: 0.0218 T12: 0.0064 REMARK 3 T13: -0.0053 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 0.8239 L22: 0.8523 REMARK 3 L33: 1.2954 L12: -0.1121 REMARK 3 L13: -0.5519 L23: 0.2178 REMARK 3 S TENSOR REMARK 3 S11: -0.0357 S12: -0.1394 S13: -0.0012 REMARK 3 S21: -0.0128 S22: 0.0274 S23: -0.1117 REMARK 3 S31: 0.0566 S32: 0.3273 S33: 0.0084 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): 32.7410 6.9400 5.7440 REMARK 3 T TENSOR REMARK 3 T11: 0.0625 T22: 0.1319 REMARK 3 T33: 0.0869 T12: -0.0631 REMARK 3 T13: 0.0072 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 19.6344 L22: 5.1642 REMARK 3 L33: 12.2421 L12: -6.1003 REMARK 3 L13: 6.0335 L23: -3.3447 REMARK 3 S TENSOR REMARK 3 S11: -0.1784 S12: 0.5170 S13: 0.7127 REMARK 3 S21: 0.0688 S22: -0.2173 S23: -0.4725 REMARK 3 S31: -0.4517 S32: 0.9490 S33: 0.3957 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 110 A 176 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4900 9.9040 11.1730 REMARK 3 T TENSOR REMARK 3 T11: 0.0426 T22: 0.0314 REMARK 3 T33: 0.0361 T12: -0.0280 REMARK 3 T13: 0.0042 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.4970 L22: 0.4440 REMARK 3 L33: 2.2775 L12: -0.0655 REMARK 3 L13: -0.4131 L23: 0.4008 REMARK 3 S TENSOR REMARK 3 S11: 0.0289 S12: -0.0673 S13: 0.1040 REMARK 3 S21: -0.0244 S22: 0.0022 S23: -0.0609 REMARK 3 S31: -0.1702 S32: 0.2241 S33: -0.0311 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 177 A 187 REMARK 3 ORIGIN FOR THE GROUP (A): 10.8510 -9.5850 -5.9940 REMARK 3 T TENSOR REMARK 3 T11: 0.2298 T22: 0.1616 REMARK 3 T33: 0.1565 T12: 0.0995 REMARK 3 T13: -0.0483 T23: -0.0967 REMARK 3 L TENSOR REMARK 3 L11: 8.4865 L22: 9.5626 REMARK 3 L33: 12.4465 L12: 4.4087 REMARK 3 L13: 4.0258 L23: 4.9478 REMARK 3 S TENSOR REMARK 3 S11: 0.2769 S12: 0.7706 S13: -0.8268 REMARK 3 S21: -0.5493 S22: 0.0666 S23: -0.4168 REMARK 3 S31: 0.5240 S32: 0.3097 S33: -0.3436 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 188 A 246 REMARK 3 ORIGIN FOR THE GROUP (A): 6.4080 0.0470 13.7360 REMARK 3 T TENSOR REMARK 3 T11: 0.0251 T22: 0.0182 REMARK 3 T33: 0.0110 T12: -0.0053 REMARK 3 T13: 0.0030 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.5163 L22: 1.0440 REMARK 3 L33: 0.9505 L12: -0.1775 REMARK 3 L13: -0.1314 L23: 0.6009 REMARK 3 S TENSOR REMARK 3 S11: -0.0012 S12: -0.0465 S13: 0.0066 REMARK 3 S21: -0.0084 S22: -0.0495 S23: 0.0669 REMARK 3 S31: -0.0172 S32: 0.0444 S33: 0.0506 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 247 A 255 REMARK 3 ORIGIN FOR THE GROUP (A): 14.2320 -20.3450 3.2250 REMARK 3 T TENSOR REMARK 3 T11: 0.2735 T22: 0.1482 REMARK 3 T33: 0.1220 T12: 0.0047 REMARK 3 T13: 0.0584 T23: 0.0426 REMARK 3 L TENSOR REMARK 3 L11: 6.5711 L22: 20.6834 REMARK 3 L33: 0.4952 L12: -8.4485 REMARK 3 L13: -0.5405 L23: 2.5318 REMARK 3 S TENSOR REMARK 3 S11: 0.0853 S12: 0.3115 S13: -0.4199 REMARK 3 S21: -0.2557 S22: -0.1822 S23: 0.3892 REMARK 3 S31: 0.0612 S32: 0.1051 S33: 0.0969 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 256 A 282 REMARK 3 ORIGIN FOR THE GROUP (A): -1.1210 -3.1550 17.7430 REMARK 3 T TENSOR REMARK 3 T11: 0.0497 T22: 0.0247 REMARK 3 T33: 0.0434 T12: -0.0091 REMARK 3 T13: 0.0056 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.2812 L22: 1.8267 REMARK 3 L33: 4.0473 L12: -1.4388 REMARK 3 L13: -1.9002 L23: 2.6384 REMARK 3 S TENSOR REMARK 3 S11: -0.0861 S12: 0.0211 S13: -0.1302 REMARK 3 S21: 0.1268 S22: -0.0772 S23: 0.1397 REMARK 3 S31: 0.2133 S32: -0.1479 S33: 0.1633 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 5W90 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228602. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.282760, 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45143 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 42.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : 0.03800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.09700 REMARK 200 R SYM FOR SHELL (I) : 0.07600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 8.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1JT1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG MME5000, 0.2M AMMONIUM REMARK 280 SULFATE, 0.1M HEPES 7.0, 0.010MM ZN CHLORIDE, 0.0108MM D- REMARK 280 CAPTOPRIL, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 41.06000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.38750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 41.06000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.38750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 813 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 180 CG CD CE NZ REMARK 470 ASN A 252 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 43 -73.75 -140.30 REMARK 500 ASN A 59 116.82 83.86 REMARK 500 ASP A 61 -154.07 58.47 REMARK 500 SER A 193 132.12 138.14 REMARK 500 ASN A 253 98.30 -27.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 90 NE2 REMARK 620 2 HIS A 92 ND1 102.1 REMARK 620 3 HIS A 168 NE2 93.5 100.0 REMARK 620 4 HOH A 531 O 164.6 92.8 87.8 REMARK 620 5 HOH A 687 O 106.3 134.4 112.8 59.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 94 OD2 REMARK 620 2 HIS A 95 NE2 93.2 REMARK 620 3 HIS A 234 NE2 96.2 98.0 REMARK 620 4 UNL A 306 O2 104.2 145.1 109.7 REMARK 620 5 HOH A 403 O 160.5 105.9 85.3 57.6 REMARK 620 6 HOH A 657 O 87.1 177.4 84.5 32.6 73.6 REMARK 620 7 HOH A 687 O 108.6 122.5 129.8 23.0 57.7 55.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UNL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UNL A 307 DBREF 5W90 A 20 282 UNP Q9K578 Q9K578_9GAMM 20 282 SEQADV 5W90 SER A 248 UNP Q9K578 GLN 248 ENGINEERED MUTATION SEQADV 5W90 GLY A 282 UNP Q9K578 ALA 282 ENGINEERED MUTATION SEQRES 1 A 263 ALA TYR PRO MET PRO ASN PRO PHE PRO PRO PHE ARG ILE SEQRES 2 A 263 ALA GLY ASN LEU TYR TYR VAL GLY THR ASP ASP LEU ALA SEQRES 3 A 263 SER TYR LEU ILE VAL THR PRO ARG GLY ASN ILE LEU ILE SEQRES 4 A 263 ASN SER ASP LEU GLU ALA ASN VAL PRO MET ILE LYS ALA SEQRES 5 A 263 SER ILE LYS LYS LEU GLY PHE LYS PHE SER ASP THR LYS SEQRES 6 A 263 ILE LEU LEU ILE SER HIS ALA HIS PHE ASP HIS ALA ALA SEQRES 7 A 263 GLY SER GLU LEU ILE LYS GLN GLN THR LYS ALA LYS TYR SEQRES 8 A 263 MET VAL MET ASP GLU ASP VAL SER VAL ILE LEU SER GLY SEQRES 9 A 263 GLY LYS SER ASP PHE HIS TYR ALA ASN ASP SER SER THR SEQRES 10 A 263 TYR PHE THR GLN SER THR VAL ASP LYS VAL LEU HIS ASP SEQRES 11 A 263 GLY GLU ARG VAL GLU LEU GLY GLY THR VAL LEU THR ALA SEQRES 12 A 263 HIS LEU THR PRO GLY HIS THR ARG GLY CYS THR THR TRP SEQRES 13 A 263 THR MET LYS LEU LYS ASP HIS GLY LYS GLN TYR GLN ALA SEQRES 14 A 263 VAL ILE ILE GLY SER ILE GLY VAL ASN PRO GLY TYR LYS SEQRES 15 A 263 LEU VAL ASP ASN ILE THR TYR PRO LYS ILE ALA GLU ASP SEQRES 16 A 263 TYR LYS HIS SER ILE LYS VAL LEU GLU SER MET ARG CYS SEQRES 17 A 263 ASP ILE PHE LEU GLY SER HIS ALA GLY MET PHE ASP LEU SEQRES 18 A 263 LYS ASN LYS TYR VAL LEU LEU SER LYS GLY GLN ASN ASN SEQRES 19 A 263 PRO PHE VAL ASP PRO THR GLY CYS LYS ASN TYR ILE GLU SEQRES 20 A 263 GLN LYS ALA ASN ASP PHE TYR THR GLU LEU LYS LYS GLN SEQRES 21 A 263 GLU THR GLY HET ZN A 301 1 HET ZN A 302 1 HET SO4 A 303 5 HET SO4 A 304 5 HET GOL A 305 6 HET UNL A 306 5 HET UNL A 307 5 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM UNL UNKNOWN LIGAND HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN 2(ZN 2+) FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 GOL C3 H8 O3 FORMUL 9 HOH *419(H2 O) HELIX 1 AA1 LEU A 62 ALA A 64 5 3 HELIX 2 AA2 ASN A 65 LEU A 76 1 12 HELIX 3 AA3 LYS A 79 SER A 81 5 3 HELIX 4 AA4 HIS A 92 ALA A 97 1 6 HELIX 5 AA5 GLY A 98 LYS A 107 1 10 HELIX 6 AA6 ASP A 116 SER A 122 1 7 HELIX 7 AA7 ASP A 133 TYR A 137 5 5 HELIX 8 AA8 LYS A 210 SER A 224 1 15 HELIX 9 AA9 HIS A 234 PHE A 238 5 5 HELIX 10 AB1 ASP A 239 LYS A 249 1 11 HELIX 11 AB2 ASP A 257 GLY A 282 1 26 SHEET 1 AA1 7 PHE A 30 ALA A 33 0 SHEET 2 AA1 7 LEU A 36 TYR A 38 -1 O TYR A 38 N PHE A 30 SHEET 3 AA1 7 TYR A 47 THR A 51 -1 O LEU A 48 N TYR A 37 SHEET 4 AA1 7 GLY A 54 ILE A 58 -1 O ILE A 56 N ILE A 49 SHEET 5 AA1 7 THR A 83 LEU A 87 1 O LEU A 87 N LEU A 57 SHEET 6 AA1 7 LYS A 109 MET A 113 1 O LYS A 109 N LEU A 86 SHEET 7 AA1 7 LYS A 145 LEU A 147 1 O LEU A 147 N VAL A 112 SHEET 1 AA2 5 ARG A 152 LEU A 155 0 SHEET 2 AA2 5 THR A 158 LEU A 164 -1 O LEU A 160 N VAL A 153 SHEET 3 AA2 5 THR A 173 ASP A 181 -1 O THR A 174 N HIS A 163 SHEET 4 AA2 5 LYS A 184 ILE A 191 -1 O ILE A 190 N TRP A 175 SHEET 5 AA2 5 ILE A 229 GLY A 232 1 O ILE A 229 N VAL A 189 SSBOND 1 CYS A 227 CYS A 261 1555 1555 2.03 LINK NE2 HIS A 90 ZN ZN A 302 1555 1555 2.14 LINK ND1 HIS A 92 ZN ZN A 302 1555 1555 2.06 LINK OD2 ASP A 94 ZN ZN A 301 1555 1555 2.05 LINK NE2 HIS A 95 ZN ZN A 301 1555 1555 2.08 LINK NE2 HIS A 168 ZN ZN A 302 1555 1555 2.09 LINK NE2 HIS A 234 ZN ZN A 301 1555 1555 2.02 LINK ZN ZN A 301 O2 BUNL A 306 1555 1555 2.16 LINK ZN ZN A 301 O BHOH A 403 1555 1555 2.39 LINK ZN ZN A 301 O AHOH A 657 1555 1555 2.51 LINK ZN ZN A 301 O AHOH A 687 1555 1555 2.01 LINK ZN ZN A 302 O AHOH A 531 1555 1555 2.26 LINK ZN ZN A 302 O AHOH A 687 1555 1555 2.00 SITE 1 AC1 8 ASP A 94 HIS A 95 HIS A 234 ZN A 302 SITE 2 AC1 8 UNL A 306 HOH A 403 HOH A 657 HOH A 687 SITE 1 AC2 7 HIS A 90 HIS A 92 HIS A 168 ZN A 301 SITE 2 AC2 7 UNL A 306 HOH A 531 HOH A 687 SITE 1 AC3 7 LYS A 74 LYS A 79 PHE A 80 SER A 81 SITE 2 AC3 7 HOH A 411 HOH A 434 HOH A 558 SITE 1 AC4 6 ARG A 53 HIS A 129 LYS A 249 HOH A 415 SITE 2 AC4 6 HOH A 519 HOH A 565 SITE 1 AC5 9 MET A 111 LYS A 145 ARG A 152 VAL A 153 SITE 2 AC5 9 GLU A 154 SER A 248 LYS A 249 HOH A 439 SITE 3 AC5 9 HOH A 456 SITE 1 AC6 12 HIS A 92 ASP A 94 ASN A 197 HIS A 234 SITE 2 AC6 12 ZN A 301 ZN A 302 HOH A 403 HOH A 425 SITE 3 AC6 12 HOH A 531 HOH A 657 HOH A 687 HOH A 757 SITE 1 AC7 9 TYR A 264 LYS A 268 HOH A 401 HOH A 402 SITE 2 AC7 9 HOH A 406 HOH A 564 HOH A 605 HOH A 624 SITE 3 AC7 9 HOH A 648 CRYST1 82.120 76.775 44.841 90.00 110.21 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012177 0.000000 0.004483 0.00000 SCALE2 0.000000 0.013025 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023764 0.00000