data_5W9Q # _entry.id 5W9Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5W9Q pdb_00005w9q 10.2210/pdb5w9q/pdb WWPDB D_1000228373 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5W9Q _pdbx_database_status.recvd_initial_deposition_date 2017-06-23 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, K.' 1 ? 'Xu, C.' 2 ? 'Tempel, W.' 3 ? 'Walker, J.R.' 4 ? 'Arrowsmith, C.H.' 5 ? 'Bountra, C.' 6 ? 'Edwards, A.M.' 7 ? 'Min, J.' 8 ? 'Structural Genomics Consortium (SGC)' 9 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 1878-4186 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 85 _citation.page_last 95.e3 _citation.title 'DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2017.11.022 _citation.pdbx_database_id_PubMed 29276034 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, C.' 1 ? primary 'Liu, K.' 2 ? primary 'Lei, M.' 3 ? primary 'Yang, A.' 4 ? primary 'Li, Y.' 5 ? primary 'Hughes, T.R.' 6 ? primary 'Min, J.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 106.520 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5W9Q _cell.details ? _cell.formula_units_Z ? _cell.length_a 139.339 _cell.length_a_esd ? _cell.length_b 27.800 _cell.length_b_esd ? _cell.length_c 64.914 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W9Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Methyl-CpG-binding domain protein 1' 7003.344 2 ? ? 'Zinc finger region (UNP residues 330-388)' ? 2 polymer syn dna 3663.392 4 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 4 non-polymer syn 'UNKNOWN ATOM OR ION' ? 16 ? ? ? ? 5 water nat water 18.015 46 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CXXC-type zinc finger protein 3,Methyl-CpG-binding protein MBD1,Protein containing methyl-CpG-binding domain 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GTNRRQNRKCGACAACLRRMDCGRCDFCCDKPKFGGSNQKRQKCRWRQCLQFAMKRLLPS GTNRRQNRKCGACAACLRRMDCGRCDFCCDKPKFGGSNQKRQKCRWRQCLQFAMKRLLPS A,B ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DA)(DA)(DC)(DG)(DT)(DT)(DG)(DG)(DC)' GCCAACGTTGGC C,D,E,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 THR n 1 3 ASN n 1 4 ARG n 1 5 ARG n 1 6 GLN n 1 7 ASN n 1 8 ARG n 1 9 LYS n 1 10 CYS n 1 11 GLY n 1 12 ALA n 1 13 CYS n 1 14 ALA n 1 15 ALA n 1 16 CYS n 1 17 LEU n 1 18 ARG n 1 19 ARG n 1 20 MET n 1 21 ASP n 1 22 CYS n 1 23 GLY n 1 24 ARG n 1 25 CYS n 1 26 ASP n 1 27 PHE n 1 28 CYS n 1 29 CYS n 1 30 ASP n 1 31 LYS n 1 32 PRO n 1 33 LYS n 1 34 PHE n 1 35 GLY n 1 36 GLY n 1 37 SER n 1 38 ASN n 1 39 GLN n 1 40 LYS n 1 41 ARG n 1 42 GLN n 1 43 LYS n 1 44 CYS n 1 45 ARG n 1 46 TRP n 1 47 ARG n 1 48 GLN n 1 49 CYS n 1 50 LEU n 1 51 GLN n 1 52 PHE n 1 53 ALA n 1 54 MET n 1 55 LYS n 1 56 ARG n 1 57 LEU n 1 58 LEU n 1 59 PRO n 1 60 SER n 2 1 DG n 2 2 DC n 2 3 DC n 2 4 DA n 2 5 DA n 2 6 DC n 2 7 DG n 2 8 DT n 2 9 DT n 2 10 DG n 2 11 DG n 2 12 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 60 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MBD1, CXXC3, PCM1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-V2R-pRARE2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MBD1_HUMAN Q9UIS9 ? 1 TNRRQNRKCGACAACLRRMDCGRCDFCCDKPKFGGSNQKRQKCRWRQCLQFAMKRLLPS 330 2 PDB 5W9Q 5W9Q ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5W9Q A 2 ? 60 ? Q9UIS9 330 ? 388 ? 330 388 2 1 5W9Q B 2 ? 60 ? Q9UIS9 330 ? 388 ? 330 388 3 2 5W9Q C 1 ? 12 ? 5W9Q 1 ? 12 ? 1 12 4 2 5W9Q D 1 ? 12 ? 5W9Q 1 ? 12 ? 1 12 5 2 5W9Q E 1 ? 12 ? 5W9Q 1 ? 12 ? 1 12 6 2 5W9Q F 1 ? 12 ? 5W9Q 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5W9Q GLY A 1 ? UNP Q9UIS9 ? ? 'expression tag' 329 1 2 5W9Q GLY B 1 ? UNP Q9UIS9 ? ? 'expression tag' 329 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5W9Q _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.4 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% PEG-400, 0.2 M magnesium chloride, 0.1 M hepes' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-300' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-06-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979590 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979590 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_synchrotron_site CLSI # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5W9Q _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 33.690 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 22639 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.700 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.300 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 0 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.054 _reflns.pdbx_Rpim_I_all 0.028 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 83217 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.800 1.840 ? ? 4957 ? ? 1337 ? 99.900 ? ? ? ? 0.726 ? ? ? ? ? ? ? ? 3.700 ? ? ? 1.900 0.848 0.435 ? 1 1 0.807 ? 9.000 33.690 ? ? 616 ? ? 201 ? 97.300 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 3.100 ? ? ? 30.700 0.051 0.029 ? 2 1 0.995 ? # _refine.aniso_B[1][1] -1.6300 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.3600 _refine.aniso_B[2][2] -4.3100 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] 4.8600 _refine.B_iso_max 109.410 _refine.B_iso_mean 48.6420 _refine.B_iso_min 25.030 _refine.correlation_coeff_Fo_to_Fc 0.9610 _refine.correlation_coeff_Fo_to_Fc_free 0.9510 _refine.details ;arp/warp was used in map improvement mode. coot was used for interactive model building. Model geometry was assessed on the molprobity server. ; _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5W9Q _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8000 _refine.ls_d_res_low 33.6900 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21331 _refine.ls_number_reflns_R_free 1306 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6100 _refine.ls_percent_reflns_R_free 5.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2277 _refine.ls_R_factor_R_free 0.2532 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2262 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entries 4HP3, 3QMD' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details 'thin shells (sftools)' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1550 _refine.pdbx_overall_ESU_R_Free 0.1390 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 11.8310 _refine.overall_SU_ML 0.1580 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.8000 _refine_hist.d_res_low 33.6900 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 1877 _refine_hist.pdbx_number_residues_total 158 _refine_hist.pdbx_B_iso_mean_ligand 45.20 _refine_hist.pdbx_B_iso_mean_solvent 40.91 _refine_hist.pdbx_number_atoms_protein 839 _refine_hist.pdbx_number_atoms_nucleic_acid 972 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.015 0.015 1976 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 1370 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.509 1.497 2843 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.367 3.010 3163 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.116 5.000 111 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 30.855 19.762 42 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.875 15.000 169 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.468 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.088 0.200 254 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 0.020 1564 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 462 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.836 1.341 441 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 0.815 1.339 440 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.393 1.996 547 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.8000 _refine_ls_shell.d_res_low 1.8470 _refine_ls_shell.number_reflns_all 1679 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.number_reflns_R_work 1610 _refine_ls_shell.percent_reflns_obs 99.8200 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3880 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3620 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5W9Q _struct.title 'Zinc finger region of MBD1 in complex with CpG DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5W9Q _struct_keywords.text 'zinc finger, dna-binding, CXXC3, Structural Genomics, Structural Genomics Consortium, SGC, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 3 ? P N N 3 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 4 ? U N N 4 ? V N N 4 ? W N N 4 ? X N N 4 ? Y N N 4 ? Z N N 4 ? AA N N 5 ? BA N N 5 ? CA N N 5 ? DA N N 5 ? EA N N 5 ? FA N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS A 13 ? ARG A 18 ? CYS A 341 ARG A 346 1 ? 6 HELX_P HELX_P2 AA2 CYS A 25 ? LYS A 31 ? CYS A 353 LYS A 359 1 ? 7 HELX_P HELX_P3 AA3 PRO A 32 ? GLY A 35 ? PRO A 360 GLY A 363 5 ? 4 HELX_P HELX_P4 AA4 CYS A 44 ? GLN A 48 ? CYS A 372 GLN A 376 5 ? 5 HELX_P HELX_P5 AA5 MET A 54 ? LEU A 58 ? MET A 382 LEU A 386 5 ? 5 HELX_P HELX_P6 AA6 ALA B 14 ? ARG B 18 ? ALA B 342 ARG B 346 1 ? 5 HELX_P HELX_P7 AA7 CYS B 25 ? LYS B 31 ? CYS B 353 LYS B 359 1 ? 7 HELX_P HELX_P8 AA8 PRO B 32 ? GLY B 35 ? PRO B 360 GLY B 363 5 ? 4 HELX_P HELX_P9 AA9 CYS B 44 ? GLN B 48 ? CYS B 372 GLN B 376 5 ? 5 HELX_P HELX_P10 AB1 MET B 54 ? LEU B 58 ? MET B 382 LEU B 386 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 10 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 338 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.288 ? ? metalc2 metalc ? ? A CYS 13 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 341 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc3 metalc ? ? A CYS 16 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 344 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc4 metalc ? ? A CYS 22 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 350 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc5 metalc ? ? A CYS 25 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 353 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.276 ? ? metalc6 metalc ? ? A CYS 28 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 356 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc7 metalc ? ? A CYS 44 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 372 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.283 ? ? metalc8 metalc ? ? A CYS 49 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 377 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.317 ? ? metalc9 metalc ? ? B CYS 10 SG ? ? ? 1_555 P ZN . ZN ? ? B CYS 338 B ZN 1002 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc10 metalc ? ? B CYS 13 SG ? ? ? 1_555 P ZN . ZN ? ? B CYS 341 B ZN 1002 1_555 ? ? ? ? ? ? ? 2.322 ? ? metalc11 metalc ? ? B CYS 16 SG ? ? ? 1_555 P ZN . ZN ? ? B CYS 344 B ZN 1002 1_555 ? ? ? ? ? ? ? 2.380 ? ? metalc12 metalc ? ? B CYS 22 SG ? ? ? 1_555 O ZN . ZN ? ? B CYS 350 B ZN 1001 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc13 metalc ? ? B CYS 25 SG ? ? ? 1_555 O ZN . ZN ? ? B CYS 353 B ZN 1001 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc14 metalc ? ? B CYS 28 SG ? ? ? 1_555 O ZN . ZN ? ? B CYS 356 B ZN 1001 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc15 metalc ? ? B CYS 44 SG ? ? ? 1_555 O ZN . ZN ? ? B CYS 372 B ZN 1001 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc16 metalc ? ? B CYS 49 SG ? ? ? 1_555 P ZN . ZN ? ? B CYS 377 B ZN 1002 1_555 ? ? ? ? ? ? ? 2.337 ? ? hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 12 N3 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 12 O2 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 12 N4 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 11 N1 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 11 O6 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 11 N2 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 10 N1 ? ? C DC 3 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 10 O6 ? ? C DC 3 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 10 N2 ? ? C DC 3 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 9 N3 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 9 O4 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 5 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 5 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 6 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 6 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 6 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 6 N3 ? ? C DG 7 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 6 O2 ? ? C DG 7 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 6 N4 ? ? C DG 7 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 5 N1 ? ? C DT 8 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 5 N6 ? ? C DT 8 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 4 N1 ? ? C DT 9 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 4 N6 ? ? C DT 9 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 10 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 10 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 10 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E DG 1 N1 ? ? ? 1_555 F DC 12 N3 ? ? E DG 1 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DG 1 N2 ? ? ? 1_555 F DC 12 O2 ? ? E DG 1 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DG 1 O6 ? ? ? 1_555 F DC 12 N4 ? ? E DG 1 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DC 2 N3 ? ? ? 1_555 F DG 11 N1 ? ? E DC 2 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DC 2 N4 ? ? ? 1_555 F DG 11 O6 ? ? E DC 2 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DC 2 O2 ? ? ? 1_555 F DG 11 N2 ? ? E DC 2 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F DG 10 N1 ? ? E DC 3 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 10 O6 ? ? E DC 3 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F DG 10 N2 ? ? E DC 3 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DA 4 N1 ? ? ? 1_555 F DT 9 N3 ? ? E DA 4 F DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DA 4 N6 ? ? ? 1_555 F DT 9 O4 ? ? E DA 4 F DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DA 5 N1 ? ? ? 1_555 F DT 8 N3 ? ? E DA 5 F DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DA 5 N6 ? ? ? 1_555 F DT 8 O4 ? ? E DA 5 F DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DC 6 N3 ? ? ? 1_555 F DG 7 N1 ? ? E DC 6 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DC 6 N4 ? ? ? 1_555 F DG 7 O6 ? ? E DC 6 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DC 6 O2 ? ? ? 1_555 F DG 7 N2 ? ? E DC 6 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DG 7 N1 ? ? ? 1_555 F DC 6 N3 ? ? E DG 7 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DG 7 N2 ? ? ? 1_555 F DC 6 O2 ? ? E DG 7 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DG 7 O6 ? ? ? 1_555 F DC 6 N4 ? ? E DG 7 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DT 8 N3 ? ? ? 1_555 F DA 5 N1 ? ? E DT 8 F DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DT 8 O4 ? ? ? 1_555 F DA 5 N6 ? ? E DT 8 F DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DT 9 N3 ? ? ? 1_555 F DA 4 N1 ? ? E DT 9 F DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DT 9 O4 ? ? ? 1_555 F DA 4 N6 ? ? E DT 9 F DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DG 10 N1 ? ? ? 1_555 F DC 3 N3 ? ? E DG 10 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DG 10 N2 ? ? ? 1_555 F DC 3 O2 ? ? E DG 10 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DG 10 O6 ? ? ? 1_555 F DC 3 N4 ? ? E DG 10 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DG 11 N1 ? ? ? 1_555 F DC 2 N3 ? ? E DG 11 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DG 11 N2 ? ? ? 1_555 F DC 2 O2 ? ? E DG 11 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? E DG 11 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 11 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E DC 12 N3 ? ? ? 1_555 F DG 1 N1 ? ? E DC 12 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E DC 12 N4 ? ? ? 1_555 F DG 1 O6 ? ? E DC 12 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? E DC 12 O2 ? ? ? 1_555 F DG 1 N2 ? ? E DC 12 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 1001 ? 5 'binding site for residue ZN A 1001' AC2 Software A ZN 1002 ? 5 'binding site for residue ZN A 1002' AC3 Software B ZN 1001 ? 4 'binding site for residue ZN B 1001' AC4 Software B ZN 1002 ? 4 'binding site for residue ZN B 1002' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS A 22 ? CYS A 350 . ? 1_555 ? 2 AC1 5 GLY A 23 ? GLY A 351 . ? 1_555 ? 3 AC1 5 CYS A 25 ? CYS A 353 . ? 1_555 ? 4 AC1 5 CYS A 28 ? CYS A 356 . ? 1_555 ? 5 AC1 5 CYS A 44 ? CYS A 372 . ? 1_555 ? 6 AC2 5 CYS A 10 ? CYS A 338 . ? 1_555 ? 7 AC2 5 GLY A 11 ? GLY A 339 . ? 1_555 ? 8 AC2 5 CYS A 13 ? CYS A 341 . ? 1_555 ? 9 AC2 5 CYS A 16 ? CYS A 344 . ? 1_555 ? 10 AC2 5 CYS A 49 ? CYS A 377 . ? 1_555 ? 11 AC3 4 CYS B 22 ? CYS B 350 . ? 1_555 ? 12 AC3 4 CYS B 25 ? CYS B 353 . ? 1_555 ? 13 AC3 4 CYS B 28 ? CYS B 356 . ? 1_555 ? 14 AC3 4 CYS B 44 ? CYS B 372 . ? 1_555 ? 15 AC4 4 CYS B 10 ? CYS B 338 . ? 1_555 ? 16 AC4 4 CYS B 13 ? CYS B 341 . ? 1_555 ? 17 AC4 4 CYS B 16 ? CYS B 344 . ? 1_555 ? 18 AC4 4 CYS B 49 ? CYS B 377 . ? 1_555 ? # _atom_sites.entry_id 5W9Q _atom_sites.fract_transf_matrix[1][1] 0.007177 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002128 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035971 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016068 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S X ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 329 ? ? ? A . n A 1 2 THR 2 330 ? ? ? A . n A 1 3 ASN 3 331 ? ? ? A . n A 1 4 ARG 4 332 ? ? ? A . n A 1 5 ARG 5 333 333 ARG ARG A . n A 1 6 GLN 6 334 334 GLN GLN A . n A 1 7 ASN 7 335 335 ASN ASN A . n A 1 8 ARG 8 336 336 ARG ARG A . n A 1 9 LYS 9 337 337 LYS LYS A . n A 1 10 CYS 10 338 338 CYS CYS A . n A 1 11 GLY 11 339 339 GLY GLY A . n A 1 12 ALA 12 340 340 ALA ALA A . n A 1 13 CYS 13 341 341 CYS CYS A . n A 1 14 ALA 14 342 342 ALA ALA A . n A 1 15 ALA 15 343 343 ALA ALA A . n A 1 16 CYS 16 344 344 CYS CYS A . n A 1 17 LEU 17 345 345 LEU LEU A . n A 1 18 ARG 18 346 346 ARG ARG A . n A 1 19 ARG 19 347 347 ARG ARG A . n A 1 20 MET 20 348 348 MET MET A . n A 1 21 ASP 21 349 349 ASP ASP A . n A 1 22 CYS 22 350 350 CYS CYS A . n A 1 23 GLY 23 351 351 GLY GLY A . n A 1 24 ARG 24 352 352 ARG ARG A . n A 1 25 CYS 25 353 353 CYS CYS A . n A 1 26 ASP 26 354 354 ASP ASP A . n A 1 27 PHE 27 355 355 PHE PHE A . n A 1 28 CYS 28 356 356 CYS CYS A . n A 1 29 CYS 29 357 357 CYS CYS A . n A 1 30 ASP 30 358 358 ASP ASP A . n A 1 31 LYS 31 359 359 LYS LYS A . n A 1 32 PRO 32 360 360 PRO PRO A . n A 1 33 LYS 33 361 361 LYS LYS A . n A 1 34 PHE 34 362 362 PHE PHE A . n A 1 35 GLY 35 363 363 GLY GLY A . n A 1 36 GLY 36 364 364 GLY GLY A . n A 1 37 SER 37 365 365 SER SER A . n A 1 38 ASN 38 366 366 ASN ASN A . n A 1 39 GLN 39 367 367 GLN GLN A . n A 1 40 LYS 40 368 368 LYS LYS A . n A 1 41 ARG 41 369 369 ARG ARG A . n A 1 42 GLN 42 370 370 GLN GLN A . n A 1 43 LYS 43 371 371 LYS LYS A . n A 1 44 CYS 44 372 372 CYS CYS A . n A 1 45 ARG 45 373 373 ARG ARG A . n A 1 46 TRP 46 374 374 TRP TRP A . n A 1 47 ARG 47 375 375 ARG ARG A . n A 1 48 GLN 48 376 376 GLN GLN A . n A 1 49 CYS 49 377 377 CYS CYS A . n A 1 50 LEU 50 378 378 LEU LEU A . n A 1 51 GLN 51 379 379 GLN GLN A . n A 1 52 PHE 52 380 380 PHE PHE A . n A 1 53 ALA 53 381 381 ALA ALA A . n A 1 54 MET 54 382 382 MET MET A . n A 1 55 LYS 55 383 383 LYS LYS A . n A 1 56 ARG 56 384 384 ARG ARG A . n A 1 57 LEU 57 385 385 LEU LEU A . n A 1 58 LEU 58 386 386 LEU LEU A . n A 1 59 PRO 59 387 387 PRO PRO A . n A 1 60 SER 60 388 388 SER SER A . n B 1 1 GLY 1 329 ? ? ? B . n B 1 2 THR 2 330 ? ? ? B . n B 1 3 ASN 3 331 ? ? ? B . n B 1 4 ARG 4 332 ? ? ? B . n B 1 5 ARG 5 333 ? ? ? B . n B 1 6 GLN 6 334 334 GLN GLN B . n B 1 7 ASN 7 335 335 ASN ASN B . n B 1 8 ARG 8 336 336 ARG ARG B . n B 1 9 LYS 9 337 337 LYS LYS B . n B 1 10 CYS 10 338 338 CYS CYS B . n B 1 11 GLY 11 339 339 GLY GLY B . n B 1 12 ALA 12 340 ? ? ? B . n B 1 13 CYS 13 341 341 CYS CYS B . n B 1 14 ALA 14 342 342 ALA ALA B . n B 1 15 ALA 15 343 343 ALA ALA B . n B 1 16 CYS 16 344 344 CYS CYS B . n B 1 17 LEU 17 345 345 LEU LEU B . n B 1 18 ARG 18 346 346 ARG ARG B . n B 1 19 ARG 19 347 347 ARG ARG B . n B 1 20 MET 20 348 348 MET MET B . n B 1 21 ASP 21 349 349 ASP ASP B . n B 1 22 CYS 22 350 350 CYS CYS B . n B 1 23 GLY 23 351 351 GLY GLY B . n B 1 24 ARG 24 352 352 ARG ARG B . n B 1 25 CYS 25 353 353 CYS CYS B . n B 1 26 ASP 26 354 354 ASP ASP B . n B 1 27 PHE 27 355 355 PHE PHE B . n B 1 28 CYS 28 356 356 CYS CYS B . n B 1 29 CYS 29 357 357 CYS CYS B . n B 1 30 ASP 30 358 358 ASP ASP B . n B 1 31 LYS 31 359 359 LYS LYS B . n B 1 32 PRO 32 360 360 PRO PRO B . n B 1 33 LYS 33 361 361 LYS LYS B . n B 1 34 PHE 34 362 362 PHE PHE B . n B 1 35 GLY 35 363 363 GLY GLY B . n B 1 36 GLY 36 364 364 GLY GLY B . n B 1 37 SER 37 365 365 SER SER B . n B 1 38 ASN 38 366 366 ASN ASN B . n B 1 39 GLN 39 367 367 GLN GLN B . n B 1 40 LYS 40 368 368 LYS LYS B . n B 1 41 ARG 41 369 369 ARG ARG B . n B 1 42 GLN 42 370 370 GLN GLN B . n B 1 43 LYS 43 371 371 LYS LYS B . n B 1 44 CYS 44 372 372 CYS CYS B . n B 1 45 ARG 45 373 373 ARG ARG B . n B 1 46 TRP 46 374 374 TRP TRP B . n B 1 47 ARG 47 375 375 ARG ARG B . n B 1 48 GLN 48 376 376 GLN GLN B . n B 1 49 CYS 49 377 377 CYS CYS B . n B 1 50 LEU 50 378 378 LEU LEU B . n B 1 51 GLN 51 379 379 GLN GLN B . n B 1 52 PHE 52 380 380 PHE PHE B . n B 1 53 ALA 53 381 381 ALA ALA B . n B 1 54 MET 54 382 382 MET MET B . n B 1 55 LYS 55 383 383 LYS LYS B . n B 1 56 ARG 56 384 384 ARG ARG B . n B 1 57 LEU 57 385 385 LEU LEU B . n B 1 58 LEU 58 386 386 LEU LEU B . n B 1 59 PRO 59 387 387 PRO PRO B . n B 1 60 SER 60 388 388 SER SER B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DC 2 2 2 DC DC C . n C 2 3 DC 3 3 3 DC DC C . n C 2 4 DA 4 4 4 DA DA C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DC 6 6 6 DC DC C . n C 2 7 DG 7 7 7 DG DG C . n C 2 8 DT 8 8 8 DT DT C . n C 2 9 DT 9 9 9 DT DT C . n C 2 10 DG 10 10 10 DG DG C . n C 2 11 DG 11 11 11 DG DG C . n C 2 12 DC 12 12 12 DC DC C . n D 2 1 DG 1 1 1 DG DG D . n D 2 2 DC 2 2 2 DC DC D . n D 2 3 DC 3 3 3 DC DC D . n D 2 4 DA 4 4 4 DA DA D . n D 2 5 DA 5 5 5 DA DA D . n D 2 6 DC 6 6 6 DC DC D . n D 2 7 DG 7 7 7 DG DG D . n D 2 8 DT 8 8 8 DT DT D . n D 2 9 DT 9 9 9 DT DT D . n D 2 10 DG 10 10 10 DG DG D . n D 2 11 DG 11 11 11 DG DG D . n D 2 12 DC 12 12 12 DC DC D . n E 2 1 DG 1 1 1 DG DG E . n E 2 2 DC 2 2 2 DC DC E . n E 2 3 DC 3 3 3 DC DC E . n E 2 4 DA 4 4 4 DA DA E . n E 2 5 DA 5 5 5 DA DA E . n E 2 6 DC 6 6 6 DC DC E . n E 2 7 DG 7 7 7 DG DG E . n E 2 8 DT 8 8 8 DT DT E . n E 2 9 DT 9 9 9 DT DT E . n E 2 10 DG 10 10 10 DG DG E . n E 2 11 DG 11 11 11 DG DG E . n E 2 12 DC 12 12 12 DC DC E . n F 2 1 DG 1 1 1 DG DG F . n F 2 2 DC 2 2 2 DC DC F . n F 2 3 DC 3 3 3 DC DC F . n F 2 4 DA 4 4 4 DA DA F . n F 2 5 DA 5 5 5 DA DA F . n F 2 6 DC 6 6 6 DC DC F . n F 2 7 DG 7 7 7 DG DG F . n F 2 8 DT 8 8 8 DT DT F . n F 2 9 DT 9 9 9 DT DT F . n F 2 10 DG 10 10 10 DG DG F . n F 2 11 DG 11 11 11 DG DG F . n F 2 12 DC 12 12 12 DC DC F . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 ZN 1 1001 1001 ZN ZN A . H 3 ZN 1 1002 1002 ZN ZN A . I 4 UNX 1 1003 3 UNX UNX A . J 4 UNX 1 1004 7 UNX UNX A . K 4 UNX 1 1005 8 UNX UNX A . L 4 UNX 1 1006 12 UNX UNX A . M 4 UNX 1 1007 15 UNX UNX A . N 4 UNX 1 1008 16 UNX UNX A . O 3 ZN 1 1001 1001 ZN ZN B . P 3 ZN 1 1002 1002 ZN ZN B . Q 4 UNX 1 1003 6 UNX UNX B . R 4 UNX 1 1004 9 UNX UNX B . S 4 UNX 1 1005 11 UNX UNX B . T 4 UNX 1 1006 13 UNX UNX B . U 4 UNX 1 1007 14 UNX UNX B . V 4 UNX 1 1008 17 UNX UNX B . W 4 UNX 1 1009 18 UNX UNX B . X 4 UNX 1 1010 19 UNX UNX B . Y 4 UNX 1 101 4 UNX UNX C . Z 4 UNX 1 101 5 UNX UNX D . AA 5 HOH 1 1101 16 HOH HOH A . AA 5 HOH 2 1102 3 HOH HOH A . AA 5 HOH 3 1103 1 HOH HOH A . AA 5 HOH 4 1104 75 HOH HOH A . AA 5 HOH 5 1105 5 HOH HOH A . AA 5 HOH 6 1106 6 HOH HOH A . AA 5 HOH 7 1107 10 HOH HOH A . AA 5 HOH 8 1108 23 HOH HOH A . AA 5 HOH 9 1109 19 HOH HOH A . AA 5 HOH 10 1110 42 HOH HOH A . AA 5 HOH 11 1111 4 HOH HOH A . AA 5 HOH 12 1112 55 HOH HOH A . AA 5 HOH 13 1113 27 HOH HOH A . AA 5 HOH 14 1114 8 HOH HOH A . AA 5 HOH 15 1115 70 HOH HOH A . BA 5 HOH 1 1101 28 HOH HOH B . BA 5 HOH 2 1102 29 HOH HOH B . BA 5 HOH 3 1103 37 HOH HOH B . BA 5 HOH 4 1104 73 HOH HOH B . BA 5 HOH 5 1105 39 HOH HOH B . BA 5 HOH 6 1106 68 HOH HOH B . BA 5 HOH 7 1107 46 HOH HOH B . BA 5 HOH 8 1108 14 HOH HOH B . BA 5 HOH 9 1109 34 HOH HOH B . BA 5 HOH 10 1110 44 HOH HOH B . BA 5 HOH 11 1111 30 HOH HOH B . BA 5 HOH 12 1112 60 HOH HOH B . CA 5 HOH 1 201 9 HOH HOH C . CA 5 HOH 2 202 40 HOH HOH C . CA 5 HOH 3 203 22 HOH HOH C . CA 5 HOH 4 204 62 HOH HOH C . CA 5 HOH 5 205 21 HOH HOH C . CA 5 HOH 6 206 7 HOH HOH C . CA 5 HOH 7 207 20 HOH HOH C . DA 5 HOH 1 201 18 HOH HOH D . DA 5 HOH 2 202 17 HOH HOH D . DA 5 HOH 3 203 43 HOH HOH D . EA 5 HOH 1 101 31 HOH HOH E . EA 5 HOH 2 102 47 HOH HOH E . EA 5 HOH 3 103 76 HOH HOH E . EA 5 HOH 4 104 51 HOH HOH E . EA 5 HOH 5 105 33 HOH HOH E . EA 5 HOH 6 106 52 HOH HOH E . EA 5 HOH 7 107 45 HOH HOH E . EA 5 HOH 8 108 38 HOH HOH E . FA 5 HOH 1 101 48 HOH HOH F . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G,H,I,J,K,L,M,N,Y,Z,AA,CA,DA 2 1 B,E,F,O,P,Q,R,S,T,U,V,W,X,BA,EA,FA # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2970 ? 1 MORE -13 ? 1 'SSA (A^2)' 7020 ? 2 'ABSA (A^2)' 2490 ? 2 MORE -14 ? 2 'SSA (A^2)' 6980 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 10 ? A CYS 338 ? 1_555 ZN ? H ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 13 ? A CYS 341 ? 1_555 109.0 ? 2 SG ? A CYS 10 ? A CYS 338 ? 1_555 ZN ? H ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 16 ? A CYS 344 ? 1_555 119.7 ? 3 SG ? A CYS 13 ? A CYS 341 ? 1_555 ZN ? H ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 16 ? A CYS 344 ? 1_555 106.1 ? 4 SG ? A CYS 10 ? A CYS 338 ? 1_555 ZN ? H ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 49 ? A CYS 377 ? 1_555 106.7 ? 5 SG ? A CYS 13 ? A CYS 341 ? 1_555 ZN ? H ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 49 ? A CYS 377 ? 1_555 114.5 ? 6 SG ? A CYS 16 ? A CYS 344 ? 1_555 ZN ? H ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 49 ? A CYS 377 ? 1_555 100.8 ? 7 SG ? A CYS 22 ? A CYS 350 ? 1_555 ZN ? G ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 25 ? A CYS 353 ? 1_555 109.8 ? 8 SG ? A CYS 22 ? A CYS 350 ? 1_555 ZN ? G ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 28 ? A CYS 356 ? 1_555 122.7 ? 9 SG ? A CYS 25 ? A CYS 353 ? 1_555 ZN ? G ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 28 ? A CYS 356 ? 1_555 104.2 ? 10 SG ? A CYS 22 ? A CYS 350 ? 1_555 ZN ? G ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 44 ? A CYS 372 ? 1_555 104.9 ? 11 SG ? A CYS 25 ? A CYS 353 ? 1_555 ZN ? G ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 44 ? A CYS 372 ? 1_555 113.7 ? 12 SG ? A CYS 28 ? A CYS 356 ? 1_555 ZN ? G ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 44 ? A CYS 372 ? 1_555 101.5 ? 13 SG ? B CYS 10 ? B CYS 338 ? 1_555 ZN ? P ZN . ? B ZN 1002 ? 1_555 SG ? B CYS 13 ? B CYS 341 ? 1_555 111.2 ? 14 SG ? B CYS 10 ? B CYS 338 ? 1_555 ZN ? P ZN . ? B ZN 1002 ? 1_555 SG ? B CYS 16 ? B CYS 344 ? 1_555 120.6 ? 15 SG ? B CYS 13 ? B CYS 341 ? 1_555 ZN ? P ZN . ? B ZN 1002 ? 1_555 SG ? B CYS 16 ? B CYS 344 ? 1_555 95.0 ? 16 SG ? B CYS 10 ? B CYS 338 ? 1_555 ZN ? P ZN . ? B ZN 1002 ? 1_555 SG ? B CYS 49 ? B CYS 377 ? 1_555 102.0 ? 17 SG ? B CYS 13 ? B CYS 341 ? 1_555 ZN ? P ZN . ? B ZN 1002 ? 1_555 SG ? B CYS 49 ? B CYS 377 ? 1_555 128.9 ? 18 SG ? B CYS 16 ? B CYS 344 ? 1_555 ZN ? P ZN . ? B ZN 1002 ? 1_555 SG ? B CYS 49 ? B CYS 377 ? 1_555 100.4 ? 19 SG ? B CYS 22 ? B CYS 350 ? 1_555 ZN ? O ZN . ? B ZN 1001 ? 1_555 SG ? B CYS 25 ? B CYS 353 ? 1_555 108.9 ? 20 SG ? B CYS 22 ? B CYS 350 ? 1_555 ZN ? O ZN . ? B ZN 1001 ? 1_555 SG ? B CYS 28 ? B CYS 356 ? 1_555 124.5 ? 21 SG ? B CYS 25 ? B CYS 353 ? 1_555 ZN ? O ZN . ? B ZN 1001 ? 1_555 SG ? B CYS 28 ? B CYS 356 ? 1_555 104.0 ? 22 SG ? B CYS 22 ? B CYS 350 ? 1_555 ZN ? O ZN . ? B ZN 1001 ? 1_555 SG ? B CYS 44 ? B CYS 372 ? 1_555 103.7 ? 23 SG ? B CYS 25 ? B CYS 353 ? 1_555 ZN ? O ZN . ? B ZN 1001 ? 1_555 SG ? B CYS 44 ? B CYS 372 ? 1_555 115.2 ? 24 SG ? B CYS 28 ? B CYS 356 ? 1_555 ZN ? O ZN . ? B ZN 1001 ? 1_555 SG ? B CYS 44 ? B CYS 372 ? 1_555 100.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-10-18 2 'Structure model' 1 1 2018-01-03 3 'Structure model' 1 2 2018-01-10 4 'Structure model' 1 3 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 3 'Structure model' '_citation.year' 14 4 'Structure model' '_database_2.pdbx_DOI' 15 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -11.9756 11.9637 8.0522 0.2670 0.3848 0.0111 0.0090 -0.0215 -0.0255 11.4005 10.1898 5.2609 0.5115 1.8513 2.4065 0.2028 -0.0829 -0.1199 0.8672 -0.1789 0.1841 -0.3113 -0.0320 0.4125 'X-RAY DIFFRACTION' 2 ? refined -22.8493 6.1379 -8.3201 0.3228 0.3971 0.0723 -0.0006 -0.0265 -0.0428 11.8033 11.0574 5.7105 -5.5343 2.8391 -0.0954 -0.1567 0.1650 -0.0083 -0.9859 -0.1868 0.2868 0.7590 0.1163 -0.4832 'X-RAY DIFFRACTION' 3 ? refined -10.9649 9.2143 21.6868 0.3431 0.4207 0.0836 -0.0528 -0.0686 -0.0153 11.0223 4.5220 2.6171 2.2064 -2.5568 0.0639 0.1601 -0.2859 0.1258 -0.9795 -0.1229 -0.0795 0.3568 -0.0774 0.1998 'X-RAY DIFFRACTION' 4 ? refined -10.7275 8.0599 20.2980 0.4144 0.3798 0.0877 -0.0345 -0.0117 -0.0287 12.7418 10.1215 2.7607 7.2853 -1.5438 -0.6910 -0.0166 0.0346 -0.0179 -0.1545 -0.9299 -0.3539 0.2464 -0.2036 0.1161 'X-RAY DIFFRACTION' 5 ? refined -23.7775 2.3751 -22.1177 0.3527 0.4462 0.2604 0.0664 -0.1517 -0.0610 8.5686 5.0978 1.2346 -4.2305 -1.5325 -0.3521 0.4019 -0.5227 0.1208 0.8027 -0.2986 0.4273 -0.4818 -0.0650 -0.0653 'X-RAY DIFFRACTION' 6 ? refined -23.8870 1.3871 -20.8795 0.4067 0.4296 0.2420 0.0472 -0.0621 -0.0379 13.2381 7.3589 2.0311 -8.7748 -0.0944 -0.1761 0.2057 -0.2559 0.0501 0.4045 -1.0322 0.6211 -0.2550 -0.0839 -0.1936 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 333 A 1002 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 334 B 1002 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 1 C 12 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 1 D 12 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 E 1 E 12 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 F 1 F 12 ? ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.32 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 354 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 354 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 354 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.98 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.68 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG B 347 ? ? -62.56 -73.67 2 1 CYS B 372 ? ? -33.27 131.39 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 337 ? NZ ? A LYS 9 NZ 2 1 Y 1 A LEU 345 ? CG ? A LEU 17 CG 3 1 Y 1 A LEU 345 ? CD1 ? A LEU 17 CD1 4 1 Y 1 A LEU 345 ? CD2 ? A LEU 17 CD2 5 1 Y 1 A ARG 347 ? CG ? A ARG 19 CG 6 1 Y 1 A ARG 347 ? CD ? A ARG 19 CD 7 1 Y 1 A ARG 347 ? NE ? A ARG 19 NE 8 1 Y 1 A ARG 347 ? CZ ? A ARG 19 CZ 9 1 Y 1 A ARG 347 ? NH1 ? A ARG 19 NH1 10 1 Y 1 A ARG 347 ? NH2 ? A ARG 19 NH2 11 1 Y 1 A MET 348 ? CG ? A MET 20 CG 12 1 Y 1 A MET 348 ? SD ? A MET 20 SD 13 1 Y 1 A MET 348 ? CE ? A MET 20 CE 14 1 Y 1 A GLN 379 ? CD ? A GLN 51 CD 15 1 Y 1 A GLN 379 ? OE1 ? A GLN 51 OE1 16 1 Y 1 A GLN 379 ? NE2 ? A GLN 51 NE2 17 1 Y 1 A SER 388 ? OG ? A SER 60 OG 18 1 Y 1 B GLN 334 ? CG ? B GLN 6 CG 19 1 Y 1 B GLN 334 ? CD ? B GLN 6 CD 20 1 Y 1 B GLN 334 ? OE1 ? B GLN 6 OE1 21 1 Y 1 B GLN 334 ? NE2 ? B GLN 6 NE2 22 1 Y 1 B LEU 345 ? CG ? B LEU 17 CG 23 1 Y 1 B LEU 345 ? CD1 ? B LEU 17 CD1 24 1 Y 1 B LEU 345 ? CD2 ? B LEU 17 CD2 25 1 Y 1 B ARG 347 ? CG ? B ARG 19 CG 26 1 Y 1 B ARG 347 ? CD ? B ARG 19 CD 27 1 Y 1 B ARG 347 ? NE ? B ARG 19 NE 28 1 Y 1 B ARG 347 ? CZ ? B ARG 19 CZ 29 1 Y 1 B ARG 347 ? NH1 ? B ARG 19 NH1 30 1 Y 1 B ARG 347 ? NH2 ? B ARG 19 NH2 31 1 Y 1 B MET 348 ? CG ? B MET 20 CG 32 1 Y 1 B MET 348 ? SD ? B MET 20 SD 33 1 Y 1 B MET 348 ? CE ? B MET 20 CE 34 1 Y 1 B LYS 368 ? NZ ? B LYS 40 NZ 35 1 Y 1 B GLN 379 ? CG ? B GLN 51 CG 36 1 Y 1 B GLN 379 ? CD ? B GLN 51 CD 37 1 Y 1 B GLN 379 ? OE1 ? B GLN 51 OE1 38 1 Y 1 B GLN 379 ? NE2 ? B GLN 51 NE2 39 1 Y 1 B PHE 380 ? CG ? B PHE 52 CG 40 1 Y 1 B PHE 380 ? CD1 ? B PHE 52 CD1 41 1 Y 1 B PHE 380 ? CD2 ? B PHE 52 CD2 42 1 Y 1 B PHE 380 ? CE1 ? B PHE 52 CE1 43 1 Y 1 B PHE 380 ? CE2 ? B PHE 52 CE2 44 1 Y 1 B PHE 380 ? CZ ? B PHE 52 CZ 45 1 Y 1 B SER 388 ? OG ? B SER 60 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 329 ? A GLY 1 2 1 Y 1 A THR 330 ? A THR 2 3 1 Y 1 A ASN 331 ? A ASN 3 4 1 Y 1 A ARG 332 ? A ARG 4 5 1 Y 1 B GLY 329 ? B GLY 1 6 1 Y 1 B THR 330 ? B THR 2 7 1 Y 1 B ASN 331 ? B ASN 3 8 1 Y 1 B ARG 332 ? B ARG 4 9 1 Y 1 B ARG 333 ? B ARG 5 10 1 Y 1 B ALA 340 ? B ALA 12 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLY N N N N 251 GLY CA C N N 252 GLY C C N N 253 GLY O O N N 254 GLY OXT O N N 255 GLY H H N N 256 GLY H2 H N N 257 GLY HA2 H N N 258 GLY HA3 H N N 259 GLY HXT H N N 260 HOH O O N N 261 HOH H1 H N N 262 HOH H2 H N N 263 LEU N N N N 264 LEU CA C N S 265 LEU C C N N 266 LEU O O N N 267 LEU CB C N N 268 LEU CG C N N 269 LEU CD1 C N N 270 LEU CD2 C N N 271 LEU OXT O N N 272 LEU H H N N 273 LEU H2 H N N 274 LEU HA H N N 275 LEU HB2 H N N 276 LEU HB3 H N N 277 LEU HG H N N 278 LEU HD11 H N N 279 LEU HD12 H N N 280 LEU HD13 H N N 281 LEU HD21 H N N 282 LEU HD22 H N N 283 LEU HD23 H N N 284 LEU HXT H N N 285 LYS N N N N 286 LYS CA C N S 287 LYS C C N N 288 LYS O O N N 289 LYS CB C N N 290 LYS CG C N N 291 LYS CD C N N 292 LYS CE C N N 293 LYS NZ N N N 294 LYS OXT O N N 295 LYS H H N N 296 LYS H2 H N N 297 LYS HA H N N 298 LYS HB2 H N N 299 LYS HB3 H N N 300 LYS HG2 H N N 301 LYS HG3 H N N 302 LYS HD2 H N N 303 LYS HD3 H N N 304 LYS HE2 H N N 305 LYS HE3 H N N 306 LYS HZ1 H N N 307 LYS HZ2 H N N 308 LYS HZ3 H N N 309 LYS HXT H N N 310 MET N N N N 311 MET CA C N S 312 MET C C N N 313 MET O O N N 314 MET CB C N N 315 MET CG C N N 316 MET SD S N N 317 MET CE C N N 318 MET OXT O N N 319 MET H H N N 320 MET H2 H N N 321 MET HA H N N 322 MET HB2 H N N 323 MET HB3 H N N 324 MET HG2 H N N 325 MET HG3 H N N 326 MET HE1 H N N 327 MET HE2 H N N 328 MET HE3 H N N 329 MET HXT H N N 330 PHE N N N N 331 PHE CA C N S 332 PHE C C N N 333 PHE O O N N 334 PHE CB C N N 335 PHE CG C Y N 336 PHE CD1 C Y N 337 PHE CD2 C Y N 338 PHE CE1 C Y N 339 PHE CE2 C Y N 340 PHE CZ C Y N 341 PHE OXT O N N 342 PHE H H N N 343 PHE H2 H N N 344 PHE HA H N N 345 PHE HB2 H N N 346 PHE HB3 H N N 347 PHE HD1 H N N 348 PHE HD2 H N N 349 PHE HE1 H N N 350 PHE HE2 H N N 351 PHE HZ H N N 352 PHE HXT H N N 353 PRO N N N N 354 PRO CA C N S 355 PRO C C N N 356 PRO O O N N 357 PRO CB C N N 358 PRO CG C N N 359 PRO CD C N N 360 PRO OXT O N N 361 PRO H H N N 362 PRO HA H N N 363 PRO HB2 H N N 364 PRO HB3 H N N 365 PRO HG2 H N N 366 PRO HG3 H N N 367 PRO HD2 H N N 368 PRO HD3 H N N 369 PRO HXT H N N 370 SER N N N N 371 SER CA C N S 372 SER C C N N 373 SER O O N N 374 SER CB C N N 375 SER OG O N N 376 SER OXT O N N 377 SER H H N N 378 SER H2 H N N 379 SER HA H N N 380 SER HB2 H N N 381 SER HB3 H N N 382 SER HG H N N 383 SER HXT H N N 384 THR N N N N 385 THR CA C N S 386 THR C C N N 387 THR O O N N 388 THR CB C N R 389 THR OG1 O N N 390 THR CG2 C N N 391 THR OXT O N N 392 THR H H N N 393 THR H2 H N N 394 THR HA H N N 395 THR HB H N N 396 THR HG1 H N N 397 THR HG21 H N N 398 THR HG22 H N N 399 THR HG23 H N N 400 THR HXT H N N 401 TRP N N N N 402 TRP CA C N S 403 TRP C C N N 404 TRP O O N N 405 TRP CB C N N 406 TRP CG C Y N 407 TRP CD1 C Y N 408 TRP CD2 C Y N 409 TRP NE1 N Y N 410 TRP CE2 C Y N 411 TRP CE3 C Y N 412 TRP CZ2 C Y N 413 TRP CZ3 C Y N 414 TRP CH2 C Y N 415 TRP OXT O N N 416 TRP H H N N 417 TRP H2 H N N 418 TRP HA H N N 419 TRP HB2 H N N 420 TRP HB3 H N N 421 TRP HD1 H N N 422 TRP HE1 H N N 423 TRP HE3 H N N 424 TRP HZ2 H N N 425 TRP HZ3 H N N 426 TRP HH2 H N N 427 TRP HXT H N N 428 ZN ZN ZN N N 429 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLY N CA sing N N 251 GLY N H sing N N 252 GLY N H2 sing N N 253 GLY CA C sing N N 254 GLY CA HA2 sing N N 255 GLY CA HA3 sing N N 256 GLY C O doub N N 257 GLY C OXT sing N N 258 GLY OXT HXT sing N N 259 HOH O H1 sing N N 260 HOH O H2 sing N N 261 LEU N CA sing N N 262 LEU N H sing N N 263 LEU N H2 sing N N 264 LEU CA C sing N N 265 LEU CA CB sing N N 266 LEU CA HA sing N N 267 LEU C O doub N N 268 LEU C OXT sing N N 269 LEU CB CG sing N N 270 LEU CB HB2 sing N N 271 LEU CB HB3 sing N N 272 LEU CG CD1 sing N N 273 LEU CG CD2 sing N N 274 LEU CG HG sing N N 275 LEU CD1 HD11 sing N N 276 LEU CD1 HD12 sing N N 277 LEU CD1 HD13 sing N N 278 LEU CD2 HD21 sing N N 279 LEU CD2 HD22 sing N N 280 LEU CD2 HD23 sing N N 281 LEU OXT HXT sing N N 282 LYS N CA sing N N 283 LYS N H sing N N 284 LYS N H2 sing N N 285 LYS CA C sing N N 286 LYS CA CB sing N N 287 LYS CA HA sing N N 288 LYS C O doub N N 289 LYS C OXT sing N N 290 LYS CB CG sing N N 291 LYS CB HB2 sing N N 292 LYS CB HB3 sing N N 293 LYS CG CD sing N N 294 LYS CG HG2 sing N N 295 LYS CG HG3 sing N N 296 LYS CD CE sing N N 297 LYS CD HD2 sing N N 298 LYS CD HD3 sing N N 299 LYS CE NZ sing N N 300 LYS CE HE2 sing N N 301 LYS CE HE3 sing N N 302 LYS NZ HZ1 sing N N 303 LYS NZ HZ2 sing N N 304 LYS NZ HZ3 sing N N 305 LYS OXT HXT sing N N 306 MET N CA sing N N 307 MET N H sing N N 308 MET N H2 sing N N 309 MET CA C sing N N 310 MET CA CB sing N N 311 MET CA HA sing N N 312 MET C O doub N N 313 MET C OXT sing N N 314 MET CB CG sing N N 315 MET CB HB2 sing N N 316 MET CB HB3 sing N N 317 MET CG SD sing N N 318 MET CG HG2 sing N N 319 MET CG HG3 sing N N 320 MET SD CE sing N N 321 MET CE HE1 sing N N 322 MET CE HE2 sing N N 323 MET CE HE3 sing N N 324 MET OXT HXT sing N N 325 PHE N CA sing N N 326 PHE N H sing N N 327 PHE N H2 sing N N 328 PHE CA C sing N N 329 PHE CA CB sing N N 330 PHE CA HA sing N N 331 PHE C O doub N N 332 PHE C OXT sing N N 333 PHE CB CG sing N N 334 PHE CB HB2 sing N N 335 PHE CB HB3 sing N N 336 PHE CG CD1 doub Y N 337 PHE CG CD2 sing Y N 338 PHE CD1 CE1 sing Y N 339 PHE CD1 HD1 sing N N 340 PHE CD2 CE2 doub Y N 341 PHE CD2 HD2 sing N N 342 PHE CE1 CZ doub Y N 343 PHE CE1 HE1 sing N N 344 PHE CE2 CZ sing Y N 345 PHE CE2 HE2 sing N N 346 PHE CZ HZ sing N N 347 PHE OXT HXT sing N N 348 PRO N CA sing N N 349 PRO N CD sing N N 350 PRO N H sing N N 351 PRO CA C sing N N 352 PRO CA CB sing N N 353 PRO CA HA sing N N 354 PRO C O doub N N 355 PRO C OXT sing N N 356 PRO CB CG sing N N 357 PRO CB HB2 sing N N 358 PRO CB HB3 sing N N 359 PRO CG CD sing N N 360 PRO CG HG2 sing N N 361 PRO CG HG3 sing N N 362 PRO CD HD2 sing N N 363 PRO CD HD3 sing N N 364 PRO OXT HXT sing N N 365 SER N CA sing N N 366 SER N H sing N N 367 SER N H2 sing N N 368 SER CA C sing N N 369 SER CA CB sing N N 370 SER CA HA sing N N 371 SER C O doub N N 372 SER C OXT sing N N 373 SER CB OG sing N N 374 SER CB HB2 sing N N 375 SER CB HB3 sing N N 376 SER OG HG sing N N 377 SER OXT HXT sing N N 378 THR N CA sing N N 379 THR N H sing N N 380 THR N H2 sing N N 381 THR CA C sing N N 382 THR CA CB sing N N 383 THR CA HA sing N N 384 THR C O doub N N 385 THR C OXT sing N N 386 THR CB OG1 sing N N 387 THR CB CG2 sing N N 388 THR CB HB sing N N 389 THR OG1 HG1 sing N N 390 THR CG2 HG21 sing N N 391 THR CG2 HG22 sing N N 392 THR CG2 HG23 sing N N 393 THR OXT HXT sing N N 394 TRP N CA sing N N 395 TRP N H sing N N 396 TRP N H2 sing N N 397 TRP CA C sing N N 398 TRP CA CB sing N N 399 TRP CA HA sing N N 400 TRP C O doub N N 401 TRP C OXT sing N N 402 TRP CB CG sing N N 403 TRP CB HB2 sing N N 404 TRP CB HB3 sing N N 405 TRP CG CD1 doub Y N 406 TRP CG CD2 sing Y N 407 TRP CD1 NE1 sing Y N 408 TRP CD1 HD1 sing N N 409 TRP CD2 CE2 doub Y N 410 TRP CD2 CE3 sing Y N 411 TRP NE1 CE2 sing Y N 412 TRP NE1 HE1 sing N N 413 TRP CE2 CZ2 sing Y N 414 TRP CE3 CZ3 doub Y N 415 TRP CE3 HE3 sing N N 416 TRP CZ2 CH2 doub Y N 417 TRP CZ2 HZ2 sing N N 418 TRP CZ3 CH2 sing Y N 419 TRP CZ3 HZ3 sing N N 420 TRP CH2 HH2 sing N N 421 TRP OXT HXT sing N N 422 # _ndb_struct_conf_na.entry_id 5W9Q _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 12 1_555 -0.496 -0.150 -0.096 -0.916 -2.611 -0.403 1 C_DG1:DC12_D C 1 ? D 12 ? 19 1 1 C DC 2 1_555 D DG 11 1_555 0.193 -0.168 0.341 -7.853 -8.466 -1.637 2 C_DC2:DG11_D C 2 ? D 11 ? 19 1 1 C DC 3 1_555 D DG 10 1_555 0.281 -0.204 0.070 -1.506 -6.339 -0.247 3 C_DC3:DG10_D C 3 ? D 10 ? 19 1 1 C DA 4 1_555 D DT 9 1_555 -0.160 -0.171 0.020 0.731 -9.103 2.193 4 C_DA4:DT9_D C 4 ? D 9 ? 20 1 1 C DA 5 1_555 D DT 8 1_555 0.035 -0.150 0.182 6.484 -5.956 5.541 5 C_DA5:DT8_D C 5 ? D 8 ? 20 1 1 C DC 6 1_555 D DG 7 1_555 0.198 -0.173 0.269 -2.409 -17.792 1.005 6 C_DC6:DG7_D C 6 ? D 7 ? 19 1 1 C DG 7 1_555 D DC 6 1_555 -0.199 -0.171 -0.145 -8.151 1.425 -1.487 7 C_DG7:DC6_D C 7 ? D 6 ? 19 1 1 C DT 8 1_555 D DA 5 1_555 -0.111 -0.114 0.230 0.501 -10.578 1.973 8 C_DT8:DA5_D C 8 ? D 5 ? 20 1 1 C DT 9 1_555 D DA 4 1_555 0.019 -0.174 0.111 2.831 -14.903 2.449 9 C_DT9:DA4_D C 9 ? D 4 ? 20 1 1 C DG 10 1_555 D DC 3 1_555 -0.072 -0.165 0.050 0.287 -7.604 -0.242 10 C_DG10:DC3_D C 10 ? D 3 ? 19 1 1 C DG 11 1_555 D DC 2 1_555 -0.201 -0.074 0.235 7.269 -8.583 1.122 11 C_DG11:DC2_D C 11 ? D 2 ? 19 1 1 C DC 12 1_555 D DG 1 1_555 0.314 -0.078 -0.100 -0.584 -3.044 1.648 12 C_DC12:DG1_D C 12 ? D 1 ? 19 1 1 E DG 1 1_555 F DC 12 1_555 -0.215 -0.092 -0.054 -2.452 -5.016 -0.990 13 E_DG1:DC12_F E 1 ? F 12 ? 19 1 1 E DC 2 1_555 F DG 11 1_555 0.118 0.044 0.397 -8.916 -4.640 -0.944 14 E_DC2:DG11_F E 2 ? F 11 ? 19 1 1 E DC 3 1_555 F DG 10 1_555 0.299 -0.100 0.261 -3.103 -8.392 1.207 15 E_DC3:DG10_F E 3 ? F 10 ? 19 1 1 E DA 4 1_555 F DT 9 1_555 -0.133 -0.125 0.104 -1.187 -6.465 0.847 16 E_DA4:DT9_F E 4 ? F 9 ? 20 1 1 E DA 5 1_555 F DT 8 1_555 0.009 -0.150 0.157 6.748 -7.663 3.748 17 E_DA5:DT8_F E 5 ? F 8 ? 20 1 1 E DC 6 1_555 F DG 7 1_555 0.066 -0.097 0.263 -3.139 -20.403 -2.093 18 E_DC6:DG7_F E 6 ? F 7 ? 19 1 1 E DG 7 1_555 F DC 6 1_555 -0.309 -0.152 -0.175 -8.723 1.226 -0.414 19 E_DG7:DC6_F E 7 ? F 6 ? 19 1 1 E DT 8 1_555 F DA 5 1_555 0.161 -0.060 0.271 -0.630 -7.862 1.714 20 E_DT8:DA5_F E 8 ? F 5 ? 20 1 1 E DT 9 1_555 F DA 4 1_555 -0.059 -0.081 0.122 4.026 -11.403 1.012 21 E_DT9:DA4_F E 9 ? F 4 ? 20 1 1 E DG 10 1_555 F DC 3 1_555 -0.144 -0.350 0.113 2.340 -5.514 -3.231 22 E_DG10:DC3_F E 10 ? F 3 ? 19 1 1 E DG 11 1_555 F DC 2 1_555 -0.132 -0.147 0.314 6.911 -7.615 -2.215 23 E_DG11:DC2_F E 11 ? F 2 ? 19 1 1 E DC 12 1_555 F DG 1 1_555 0.251 -0.097 -0.126 0.738 -3.126 0.080 24 E_DC12:DG1_F E 12 ? F 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 12 1_555 C DC 2 1_555 D DG 11 1_555 -0.733 -0.477 3.459 -4.230 -0.688 36.440 -0.657 0.545 3.527 -1.095 6.735 36.682 1 CC_DG1DC2:DG11DC12_DD C 1 ? D 12 ? C 2 ? D 11 ? 1 C DC 2 1_555 D DG 11 1_555 C DC 3 1_555 D DG 10 1_555 0.162 0.016 3.102 2.820 5.836 30.597 -1.023 0.208 3.055 10.905 -5.271 31.260 2 CC_DC2DC3:DG10DG11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 C DC 3 1_555 D DG 10 1_555 C DA 4 1_555 D DT 9 1_555 -0.020 1.949 3.270 0.562 -0.399 44.419 2.614 0.079 3.252 -0.528 -0.743 44.424 3 CC_DC3DA4:DT9DG10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 C DA 4 1_555 D DT 9 1_555 C DA 5 1_555 D DT 8 1_555 0.732 0.315 3.237 -2.179 7.555 27.361 -1.082 -1.987 3.143 15.567 4.491 28.448 4 CC_DA4DA5:DT8DT9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 C DA 5 1_555 D DT 8 1_555 C DC 6 1_555 D DG 7 1_555 -1.035 0.148 3.506 -3.306 -7.747 42.432 1.021 1.055 3.495 -10.579 4.514 43.222 5 CC_DA5DC6:DG7DT8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 C DC 6 1_555 D DG 7 1_555 C DG 7 1_555 D DC 6 1_555 0.591 0.789 3.571 2.690 1.426 38.121 1.007 -0.529 3.629 2.180 -4.111 38.238 6 CC_DC6DG7:DC6DG7_DD C 6 ? D 7 ? C 7 ? D 6 ? 1 C DG 7 1_555 D DC 6 1_555 C DT 8 1_555 D DA 5 1_555 -0.596 0.110 3.137 -3.746 2.323 30.399 -0.235 0.411 3.185 4.401 7.097 30.710 7 CC_DG7DT8:DA5DC6_DD C 7 ? D 6 ? C 8 ? D 5 ? 1 C DT 8 1_555 D DA 5 1_555 C DT 9 1_555 D DA 4 1_555 -0.322 0.198 3.256 3.926 6.336 31.939 -0.736 1.243 3.175 11.323 -7.015 32.775 8 CC_DT8DT9:DA4DA5_DD C 8 ? D 5 ? C 9 ? D 4 ? 1 C DT 9 1_555 D DA 4 1_555 C DG 10 1_555 D DC 3 1_555 -0.026 2.674 3.359 -0.245 -7.822 51.061 3.585 0.014 2.947 -9.013 0.282 51.618 9 CC_DT9DG10:DC3DA4_DD C 9 ? D 4 ? C 10 ? D 3 ? 1 C DG 10 1_555 D DC 3 1_555 C DG 11 1_555 D DC 2 1_555 0.486 0.307 3.197 -2.070 3.266 27.548 -0.127 -1.496 3.167 6.817 4.319 27.813 10 CC_DG10DG11:DC2DC3_DD C 10 ? D 3 ? C 11 ? D 2 ? 1 C DG 11 1_555 D DC 2 1_555 C DC 12 1_555 D DG 1 1_555 0.787 -0.518 3.453 3.586 -1.156 34.504 -0.679 -0.732 3.529 -1.942 -6.024 34.703 11 CC_DG11DC12:DG1DC2_DD C 11 ? D 2 ? C 12 ? D 1 ? 1 E DG 1 1_555 F DC 12 1_555 E DC 2 1_555 F DG 11 1_555 -0.785 -0.490 3.416 -4.230 -0.652 35.177 -0.704 0.631 3.492 -1.074 6.967 35.428 12 EE_DG1DC2:DG11DC12_FF E 1 ? F 12 ? E 2 ? F 11 ? 1 E DC 2 1_555 F DG 11 1_555 E DC 3 1_555 F DG 10 1_555 0.076 0.215 3.201 2.791 3.531 32.002 -0.228 0.349 3.201 6.366 -5.032 32.309 13 EE_DC2DC3:DG10DG11_FF E 2 ? F 11 ? E 3 ? F 10 ? 1 E DC 3 1_555 F DG 10 1_555 E DA 4 1_555 F DT 9 1_555 -0.077 2.390 3.287 0.547 -4.784 47.222 3.344 0.139 3.044 -5.954 -0.681 47.452 14 EE_DC3DA4:DT9DG10_FF E 3 ? F 10 ? E 4 ? F 9 ? 1 E DA 4 1_555 F DT 9 1_555 E DA 5 1_555 F DT 8 1_555 0.658 0.328 3.215 -1.963 8.328 24.251 -1.591 -2.029 3.093 19.079 4.497 25.694 15 EE_DA4DA5:DT8DT9_FF E 4 ? F 9 ? E 5 ? F 8 ? 1 E DA 5 1_555 F DT 8 1_555 E DC 6 1_555 F DG 7 1_555 -1.176 0.060 3.522 -4.357 -6.850 41.364 0.857 1.145 3.569 -9.587 6.097 42.119 16 EE_DA5DC6:DG7DT8_FF E 5 ? F 8 ? E 6 ? F 7 ? 1 E DC 6 1_555 F DG 7 1_555 E DG 7 1_555 F DC 6 1_555 0.761 0.905 3.594 2.412 0.371 37.973 1.336 -0.828 3.642 0.570 -3.702 38.048 17 EE_DC6DG7:DC6DG7_FF E 6 ? F 7 ? E 7 ? F 6 ? 1 E DG 7 1_555 F DC 6 1_555 E DT 8 1_555 F DA 5 1_555 -0.603 0.042 3.202 -4.137 3.634 30.435 -0.619 0.336 3.236 6.852 7.801 30.917 18 EE_DG7DT8:DA5DC6_FF E 7 ? F 6 ? E 8 ? F 5 ? 1 E DT 8 1_555 F DA 5 1_555 E DT 9 1_555 F DA 4 1_555 -0.509 0.349 3.249 4.090 9.204 27.343 -1.323 1.910 3.095 18.685 -8.304 29.106 19 EE_DT8DT9:DA4DA5_FF E 8 ? F 5 ? E 9 ? F 4 ? 1 E DT 9 1_555 F DA 4 1_555 E DG 10 1_555 F DC 3 1_555 -0.056 2.799 3.316 -0.535 -11.241 50.635 3.908 0.031 2.680 -12.960 0.616 51.790 20 EE_DT9DG10:DC3DA4_FF E 9 ? F 4 ? E 10 ? F 3 ? 1 E DG 10 1_555 F DC 3 1_555 E DG 11 1_555 F DC 2 1_555 0.430 0.186 3.248 -2.421 2.992 31.312 -0.210 -1.237 3.210 5.518 4.465 31.542 21 EE_DG10DG11:DC2DC3_FF E 10 ? F 3 ? E 11 ? F 2 ? 1 E DG 11 1_555 F DC 2 1_555 E DC 12 1_555 F DG 1 1_555 0.865 -0.547 3.454 4.080 -0.462 34.266 -0.845 -0.781 3.538 -0.781 -6.893 34.503 22 EE_DG11DC12:DG1DC2_FF E 11 ? F 2 ? E 12 ? F 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 'UNKNOWN ATOM OR ION' UNX 5 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 4HP3 'PDB entries 4HP3, 3QMD' 2 ? 'experimental model' PDB 3QMD 'PDB entries 4HP3, 3QMD' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #